CmoCh14G015780 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G015780
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	RALF
Location	Cmo_Chr14 : 12574286 .. 12574621 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACAAGAATCCCAAAATCTTGCTTTCTTCTCTTTCTCCTCCTCGTTCAAGATCTTTGTCTCGTTCGAGCTTCATCGAAGCACTCTTGCAATGGCTCCATAGCTGAGTGTGGTGGTGAAGACGAGACGTTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGCACAGCAAAAGAAATATATCTCTATTGGAGCTTTGAAAAAGGATCACCCAGCTTGTGATGGGGGTGGCGGTGGTCAACCTTACACTAAAAGCGGAAGCTGCGCTCCGCCGCCAGCAAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCTGACGATTGA

mRNA sequence

ATGACAACAAGAATCCCAAAATCTTGCTTTCTTCTCTTTCTCCTCCTCGTTCAAGATCTTTGTCTCGTTCGAGCTTCATCGAAGCACTCTTGCAATGGCTCCATAGCTGAGTGTGGTGGTGAAGACGAGACGTTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGCACAGCAAAAGAAATATATCTCTATTGGAGCTTTGAAAAAGGATCACCCAGCTTGTGATGGGGGTGGCGGTGGTCAACCTTACACTAAAAGCGGAAGCTGCGCTCCGCCGCCAGCAAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCTGACGATTGA

Coding sequence (CDS)

ATGACAACAAGAATCCCAAAATCTTGCTTTCTTCTCTTTCTCCTCCTCGTTCAAGATCTTTGTCTCGTTCGAGCTTCATCGAAGCACTCTTGCAATGGCTCCATAGCTGAGTGTGGTGGTGAAGACGAGACGTTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGCACAGCAAAAGAAATATATCTCTATTGGAGCTTTGAAAAAGGATCACCCAGCTTGTGATGGGGGTGGCGGTGGTCAACCTTACACTAAAAGCGGAAGCTGCGCTCCGCCGCCAGCAAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCTGACGATTGA

Homology

[Close]

BLAST of CmoCh14G015780 vs. Swiss-Prot
Match: RLF32_ARATH (Protein RALF-like 32 OS=Arabidopsis thaliana GN=RALFL32 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18
Identity = 52/113 (46.02%), Postives = 68/113 (60.18%), Query Frame = 1


Query: 3   TRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDET-----LMESEISRRFLAQ 62
           +RI  +  + FL L+      +ASS   CNGS+AEC    ET     +MES  S+R   +
Sbjct: 6   SRIFSTITIFFLCLLLAHVTSKASSSSLCNGSVAECSSMVETEEMSVIMESWSSQRLTEE 65

Query: 63  QKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSD 111
           Q   +S GAL+++ PACDGG  G+ Y  S  C PPP+NPY+RGCSK YRC  D
Sbjct: 66  QAHKLSYGALRRNQPACDGGKRGESY--STQCLPPPSNPYSRGCSKHYRCGRD 116

[Close]

BLAST of CmoCh14G015780 vs. Swiss-Prot
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-11
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 1


Query: 31  CNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCA 90
           C+GSIAEC G +E  M+SEI+RR LA   KYIS  +LK++   C   G      ++G+  
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRILA-TTKYISYQSLKRNSVPCSRRGASYYNCQNGA-- 106

Query: 91  PPPANPYNRGCSKIYRCRS 110
              ANPY+RGCSKI RCRS
Sbjct: 107 --QANPYSRGCSKIARCRS 120

[Close]

BLAST of CmoCh14G015780 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.9e-11
Identity = 44/93 (47.31%), Postives = 55/93 (59.14%), Query Frame = 1


Query: 20  LCLVRASSKH---SCNGSIAECGGEDETL-MESEISRRFLAQQKKYISIGALKKDHPACD 79
           L  VRA S      C GSIAEC  E+E +  +S+ISRR LA QKKYIS GA++++   C 
Sbjct: 31  LDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISRRILA-QKKYISYGAMRRNSVPCS 90

Query: 80  GGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR 109
             G      + G+     ANPY+RGCS I RCR
Sbjct: 91  RRGASYYNCQRGA----QANPYSRGCSTITRCR 118

[Close]

BLAST of CmoCh14G015780 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 8.6e-11
Identity = 42/86 (48.84%), Postives = 50/86 (58.14%), Query Frame = 1


Query: 25  ASSKHSCNGSIAECGGEDETL-MESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPY 84
           A S   C GSI EC  E+E   ++SE +RR LA  KKYIS GAL+K+   C   G     
Sbjct: 35  ARSGGGCKGSIGECIAEEEEFELDSESNRRILAT-KKYISYGALQKNSVPCSRRGASYYN 94

Query: 85  TKSGSCAPPPANPYNRGCSKIYRCRS 110
            K G+     ANPY+RGCS I RCRS
Sbjct: 95  CKPGA----QANPYSRGCSAITRCRS 115

[Close]

BLAST of CmoCh14G015780 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.6e-10
Identity = 39/81 (48.15%), Postives = 49/81 (60.49%), Query Frame = 1


Query: 31  CNGSIAECG---GEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSG 90
           CNG+IAEC     E+E  M+SEI+RR LA   KYIS GAL+++   C   G      + G
Sbjct: 40  CNGTIAECSLSTAEEEFEMDSEINRRILATT-KYISYGALRRNTVPCSRRGASYYNCRRG 99

Query: 91  SCAPPPANPYNRGCSKIYRCR 109
           +     ANPY+RGCS I RCR
Sbjct: 100 A----QANPYSRGCSAITRCR 115

[Close]

BLAST of CmoCh14G015780 vs. TrEMBL
Match: A0A0A0L9A8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171840 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 8.3e-45
Identity = 90/109 (82.57%), Postives = 95/109 (87.16%), Query Frame = 1


Query: 7   KSCFLL----FLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYI 66
           ++CFLL    FL L QDLCLVRASS HSCNGSIA C  E+E LMESEI+RRFL QQKKYI
Sbjct: 20  QTCFLLLLFLFLFLFQDLCLVRASSTHSCNGSIAACANEEEMLMESEITRRFLEQQKKYI 79

Query: 67  SIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSDD 112
           SIGALKKDHPACDG  GGQPYT+SGSCAPPPANPYNRGCSKIYRCRSDD
Sbjct: 80  SIGALKKDHPACDGASGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSDD 128

[Close]

BLAST of CmoCh14G015780 vs. TrEMBL
Match: A0A0A0L624_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171850 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-28
Identity = 71/98 (72.45%), Postives = 76/98 (77.55%), Query Frame = 1


Query: 7   KSCFLLFLLL---VQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKK-YI 66
           ++CFLL L L   +QDLCLVR SS HSCNGSIAEC  E+E LMESEI+RRFLAQQKK YI
Sbjct: 4   QTCFLLLLFLSFLLQDLCLVRGSSMHSCNGSIAECANEEEMLMESEITRRFLAQQKKNYI 63

Query: 67  SIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG 101
           S   LKKD PACD G  GQPYTKSGSC P  ANPYN G
Sbjct: 64  SYPTLKKDRPACD-GASGQPYTKSGSCVPSQANPYNPG 100

[Close]

BLAST of CmoCh14G015780 vs. TrEMBL
Match: C6T1A5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G151400 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.4e-28
Identity = 63/103 (61.17%), Postives = 76/103 (73.79%), Query Frame = 1


Query: 10  FLLFLLLVQDLCLVRASSKHS--CNGSIAECGGEDETLMESEISRRFLAQQKKYISIGAL 69
           F+LF  +    C V +   H+  CNGSIAEC  EDE LMESEISRRFL Q++ YIS GAL
Sbjct: 16  FMLFSFMHFSSCTVFSLKSHASTCNGSIAECNQEDELLMESEISRRFLEQKRSYISNGAL 75

Query: 70  KKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSD 111
           ++D P C+GGG G+ Y+K+G C PPP+NP NRGCSK YRCRSD
Sbjct: 76  QRDKPVCNGGGSGEAYSKTGGCLPPPSNPQNRGCSKYYRCRSD 118

[Close]

BLAST of CmoCh14G015780 vs. TrEMBL
Match: B7FMN1_MEDTR (RALF OS=Medicago truncatula GN=MTR_8g083150 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.4e-28
Identity = 65/105 (61.90%), Postives = 77/105 (73.33%), Query Frame = 1


Query: 10  FLLFLLLVQDLCLVRASSKHS----CNGSIAECGGEDETLMESEISRRFLAQQKKYISIG 69
           F+LF  +     ++  SS H     CNGSIAEC  EDE LMESEISRRFL +Q++YIS G
Sbjct: 15  FMLFGFMNLSSTVISLSSNHHHASICNGSIAECNQEDEQLMESEISRRFL-EQRRYISEG 74

Query: 70  ALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSD 111
           ALK+D P C+GG GG+ Y+KS  C PPP+NPYNRGCSK YRCRSD
Sbjct: 75  ALKRDKPVCNGGAGGEAYSKSAGCIPPPSNPYNRGCSKYYRCRSD 118

[Close]

BLAST of CmoCh14G015780 vs. TrEMBL
Match: A0A0R0IK43_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G108200 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.2e-28
Identity = 65/112 (58.04%), Postives = 80/112 (71.43%), Query Frame = 1


Query: 2   TTRIPKSC-FLLFLLLVQDLCLVRASSKHS--CNGSIAECGGEDETLMESEISRRFLAQQ 61
           T R+   C F+LF  +    C V +   H+  CNGSIAEC  EDE LMESEISRRFL Q+
Sbjct: 7   TIRLVCFCYFMLFSSMHFTSCTVLSLKSHASTCNGSIAECNQEDELLMESEISRRFLEQK 66

Query: 62  KKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSD 111
           + YIS GAL++D P C+GGG G+ Y+K+G C PPP+NP +RGCSK YRCRSD
Sbjct: 67  RSYISNGALQRDKPVCNGGGSGEAYSKTGGCLPPPSNPQSRGCSKYYRCRSD 118

[Close]

BLAST of CmoCh14G015780 vs. TAIR10
Match: AT4G14010.1 (AT4G14010.1 ralf-like 32)

HSP 1 Score: 94.0 bits (232), Expect = 6.3e-20
Identity = 52/113 (46.02%), Postives = 68/113 (60.18%), Query Frame = 1


Query: 3   TRIPKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEDET-----LMESEISRRFLAQ 62
           +RI  +  + FL L+      +ASS   CNGS+AEC    ET     +MES  S+R   +
Sbjct: 6   SRIFSTITIFFLCLLLAHVTSKASSSSLCNGSVAECSSMVETEEMSVIMESWSSQRLTEE 65

Query: 63  QKKYISIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSD 111
           Q   +S GAL+++ PACDGG  G+ Y  S  C PPP+NPY+RGCSK YRC  D
Sbjct: 66  QAHKLSYGALRRNQPACDGGKRGESY--STQCLPPPSNPYSRGCSKHYRCGRD 116

[Close]

BLAST of CmoCh14G015780 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1)

HSP 1 Score: 70.1 bits (170), Expect = 9.8e-13
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 1


Query: 31  CNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSGSCA 90
           C+GSIAEC G +E  M+SEI+RR LA   KYIS  +LK++   C   G      ++G+  
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRILA-TTKYISYQSLKRNSVPCSRRGASYYNCQNGA-- 106

Query: 91  PPPANPYNRGCSKIYRCRS 110
              ANPY+RGCSKI RCRS
Sbjct: 107 --QANPYSRGCSKIARCRS 120

[Close]

BLAST of CmoCh14G015780 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 68.9 bits (167), Expect = 2.2e-12
Identity = 44/93 (47.31%), Postives = 55/93 (59.14%), Query Frame = 1


Query: 20  LCLVRASSKH---SCNGSIAECGGEDETL-MESEISRRFLAQQKKYISIGALKKDHPACD 79
           L  VRA S      C GSIAEC  E+E +  +S+ISRR LA QKKYIS GA++++   C 
Sbjct: 31  LDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISRRILA-QKKYISYGAMRRNSVPCS 90

Query: 80  GGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR 109
             G      + G+     ANPY+RGCS I RCR
Sbjct: 91  RRGASYYNCQRGA----QANPYSRGCSTITRCR 118

[Close]

BLAST of CmoCh14G015780 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 65.1 bits (157), Expect = 3.2e-11
Identity = 39/81 (48.15%), Postives = 49/81 (60.49%), Query Frame = 1


Query: 31  CNGSIAECG---GEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKSG 90
           CNG+IAEC     E+E  M+SEI+RR LA   KYIS GAL+++   C   G      + G
Sbjct: 40  CNGTIAECSLSTAEEEFEMDSEINRRILATT-KYISYGALRRNTVPCSRRGASYYNCRRG 99

Query: 91  SCAPPPANPYNRGCSKIYRCR 109
           +     ANPY+RGCS I RCR
Sbjct: 100 A----QANPYSRGCSAITRCR 115

[Close]

BLAST of CmoCh14G015780 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 57.4 bits (137), Expect = 6.6e-09
Identity = 39/95 (41.05%), Postives = 51/95 (53.68%), Query Frame = 1


Query: 31  CNGSIAEC---------------GGE--DETLMESEISRRFLAQQKKYISIGALKKDHPA 90
           C G+IAEC               GGE  +E  M+SEI+RR LA  ++YIS GAL+++   
Sbjct: 47  CRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILAT-RRYISYGALRRNTIP 106

Query: 91  CDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCR 109
           C   G      + G+     ANPY+RGCS I RCR
Sbjct: 107 CSRRGASYYNCRRGA----QANPYSRGCSAITRCR 136

[Close]

BLAST of CmoCh14G015780 vs. NCBI nr
Match: gi|659077106|ref|XP_008439036.1| (PREDICTED: protein RALF-like 32 [Cucumis melo])

HSP 1 Score: 192.6 bits (488), Expect = 3.7e-46
Identity = 93/106 (87.74%), Postives = 96/106 (90.57%), Query Frame = 1


Query: 9   CFLL---FLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIG 68
           CFLL   FL L+QDLCLVRASS HSCNGSIAECG EDE LMESEISRRFLAQQKKYISIG
Sbjct: 15  CFLLLLLFLFLLQDLCLVRASSTHSCNGSIAECGSEDEILMESEISRRFLAQQKKYISIG 74

Query: 69  ALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSDD 112
           ALKKDHPACDG  GG+PYTKSGSCAPPPANPY+RGC KIYRCRSDD
Sbjct: 75  ALKKDHPACDGASGGRPYTKSGSCAPPPANPYDRGCPKIYRCRSDD 120

[Close]

BLAST of CmoCh14G015780 vs. NCBI nr
Match: gi|778679218|ref|XP_004147646.2| (PREDICTED: protein RALF-like 32 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-44
Identity = 90/109 (82.57%), Postives = 95/109 (87.16%), Query Frame = 1


Query: 7   KSCFLL----FLLLVQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYI 66
           ++CFLL    FL L QDLCLVRASS HSCNGSIA C  E+E LMESEI+RRFL QQKKYI
Sbjct: 20  QTCFLLLLFLFLFLFQDLCLVRASSTHSCNGSIAACANEEEMLMESEITRRFLEQQKKYI 79

Query: 67  SIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSDD 112
           SIGALKKDHPACDG  GGQPYT+SGSCAPPPANPYNRGCSKIYRCRSDD
Sbjct: 80  SIGALKKDHPACDGASGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSDD 128

[Close]

BLAST of CmoCh14G015780 vs. NCBI nr
Match: gi|700202095|gb|KGN57228.1| (hypothetical protein Csa_3G171850 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-28
Identity = 71/98 (72.45%), Postives = 76/98 (77.55%), Query Frame = 1


Query: 7   KSCFLLFLLL---VQDLCLVRASSKHSCNGSIAECGGEDETLMESEISRRFLAQQKK-YI 66
           ++CFLL L L   +QDLCLVR SS HSCNGSIAEC  E+E LMESEI+RRFLAQQKK YI
Sbjct: 4   QTCFLLLLFLSFLLQDLCLVRGSSMHSCNGSIAECANEEEMLMESEITRRFLAQQKKNYI 63

Query: 67  SIGALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRG 101
           S   LKKD PACD G  GQPYTKSGSC P  ANPYN G
Sbjct: 64  SYPTLKKDRPACD-GASGQPYTKSGSCVPSQANPYNPG 100

[Close]

BLAST of CmoCh14G015780 vs. NCBI nr
Match: gi|351722809|ref|NP_001235977.1| (uncharacterized protein LOC100500295 precursor [Glycine max])

HSP 1 Score: 132.9 bits (333), Expect = 3.5e-28
Identity = 63/103 (61.17%), Postives = 76/103 (73.79%), Query Frame = 1


Query: 10  FLLFLLLVQDLCLVRASSKHS--CNGSIAECGGEDETLMESEISRRFLAQQKKYISIGAL 69
           F+LF  +    C V +   H+  CNGSIAEC  EDE LMESEISRRFL Q++ YIS GAL
Sbjct: 16  FMLFSFMHFSSCTVFSLKSHASTCNGSIAECNQEDELLMESEISRRFLEQKRSYISNGAL 75

Query: 70  KKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSD 111
           ++D P C+GGG G+ Y+K+G C PPP+NP NRGCSK YRCRSD
Sbjct: 76  QRDKPVCNGGGSGEAYSKTGGCLPPPSNPQNRGCSKYYRCRSD 118

[Close]

BLAST of CmoCh14G015780 vs. NCBI nr
Match: gi|357518655|ref|XP_003629616.1| (RALF [Medicago truncatula])

HSP 1 Score: 131.7 bits (330), Expect = 7.8e-28
Identity = 65/105 (61.90%), Postives = 77/105 (73.33%), Query Frame = 1


Query: 10  FLLFLLLVQDLCLVRASSKHS----CNGSIAECGGEDETLMESEISRRFLAQQKKYISIG 69
           F+LF  +     ++  SS H     CNGSIAEC  EDE LMESEISRRFL +Q++YIS G
Sbjct: 15  FMLFGFMNLSSTVISLSSNHHHASICNGSIAECNQEDEQLMESEISRRFL-EQRRYISEG 74

Query: 70  ALKKDHPACDGGGGGQPYTKSGSCAPPPANPYNRGCSKIYRCRSD 111
           ALK+D P C+GG GG+ Y+KS  C PPP+NPYNRGCSK YRCRSD
Sbjct: 75  ALKRDKPVCNGGAGGEAYSKSAGCIPPPSNPYNRGCSKYYRCRSD 118

The following BLAST results are available for this feature:

BLAST of CmoCh14G015780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLF32_ARATH	1.1e-18	46.02	Protein RALF-like 32 OS=Arabidopsis thaliana GN=RALFL32 PE=3 SV=1	[more]
RLF1_ARATH	1.7e-11	50.63	Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1	[more]
RLF22_ARATH	3.9e-11	47.31	Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1	[more]
RALF_TOBAC	8.6e-11	48.84	Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1	[more]
RLF33_ARATH	5.6e-10	48.15	Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1	[more]

BLAST of CmoCh14G015780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9A8_CUCSA	8.3e-45	82.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171840 PE=4 SV=1	[more]
A0A0A0L624_CUCSA	1.1e-28	72.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171850 PE=4 SV=1	[more]
C6T1A5_SOYBN	2.4e-28	61.17	Uncharacterized protein OS=Glycine max GN=GLYMA_05G151400 PE=2 SV=1	[more]
B7FMN1_MEDTR	5.4e-28	61.90	RALF OS=Medicago truncatula GN=MTR_8g083150 PE=2 SV=1	[more]
A0A0R0IK43_SOYBN	9.2e-28	58.04	Uncharacterized protein OS=Glycine max GN=GLYMA_08G108200 PE=4 SV=1	[more]

BLAST of CmoCh14G015780 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14010.1	6.3e-20	46.02	ralf-like 32	[more]
AT1G02900.1	9.8e-13	50.63	rapid alkalinization factor 1	[more]
AT3G05490.1	2.2e-12	47.31	ralf-like 22	[more]
AT4G15800.1	3.2e-11	48.15	ralf-like 33	[more]
AT3G16570.1	6.6e-09	41.05	rapid alkalinization factor 23	[more]

BLAST of CmoCh14G015780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077106\|ref\|XP_008439036.1\|	3.7e-46	87.74	PREDICTED: protein RALF-like 32 [Cucumis melo]	[more]
gi\|778679218\|ref\|XP_004147646.2\|	1.2e-44	82.57	PREDICTED: protein RALF-like 32 [Cucumis sativus]	[more]
gi\|700202095\|gb\|KGN57228.1\|	1.6e-28	72.45	hypothetical protein Csa_3G171850 [Cucumis sativus]	[more]
gi\|351722809\|ref\|NP_001235977.1\|	3.5e-28	61.17	uncharacterized protein LOC100500295 precursor [Glycine max]	[more]
gi\|357518655\|ref\|XP_003629616.1\|	7.8e-28	61.90	RALF [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0007154	cell communication
biological_process	GO:0044700	single organism signaling
biological_process	GO:0008150	biological_process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0005179	hormone activity
molecular_function	GO:0004871	signal transducer activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G015780.1	CmoCh14G015780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 43..108 score: 1.1
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 10..111 score: 9.9
None	No IPR available	PANTHER	PTHR33136:SF3	PROTEIN RALF-LIKE 32	coord: 10..111 score: 9.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G015780	Cucsa.251990	Cucumber (Gy14) v1	cgycmoB0700
CmoCh14G015780	CmaCh14G015430	Cucurbita maxima (Rimu)	cmacmoB245
CmoCh14G015780	Cla021850	Watermelon (97103) v1	cmowmB231
CmoCh14G015780	Csa3G171840	Cucumber (Chinese Long) v2	cmocuB239
CmoCh14G015780	MELO3C006773	Melon (DHL92) v3.5.1	cmomeB230
CmoCh14G015780	CSPI03G15560	Wild cucumber (PI 183967)	cmocpiB243
CmoCh14G015780	Lsi05G013670	Bottle gourd (USVL1VR-Ls)	cmolsiB234
CmoCh14G015780	Cp4.1LG08g05550	Cucurbita pepo (Zucchini)	cmocpeB254
CmoCh14G015780	Cp4.1LG03g12260	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G015780	MELO3C006773.2	Melon (DHL92) v3.6.1	cmomedB260
CmoCh14G015780	CsaV3_3G015740	Cucumber (Chinese Long) v3	cmocucB0283
CmoCh14G015780	Cla97C05G088730	Watermelon (97103) v2	cmowmbB243
CmoCh14G015780	Bhi01G000843	Wax gourd	cmowgoB0317
CmoCh14G015780	CsGy3G015610	Cucumber (Gy14) v2	cgybcmoB290
CmoCh14G015780	Carg24781	Silver-seed gourd	carcmoB1393
CmoCh14G015780	Carg15515	Silver-seed gourd	carcmoB0946

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh14G015780	CmoCh06G015950	Cucurbita moschata (Rifu)	cmocmoB224

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G015780	Cucurbita maxima (Rimu)	cmacmoB797
CmoCh14G015780	Watermelon (Charleston Gray)	cmowcgB219