Carg15515 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15515
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein RALF-like 32
Location	Cucurbita_argyrosperma_scaffold_069 : 630336 .. 630596 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATGAGTTCTTGCAATGTCTCAATGGCCGAGCATGGTAACGAAGAGGAGCTGTTAGTGCAATCTGAGATGGGTAGAAGGTTTCTCGAAGAACAGAAGAAATATATCTCCATTGAAGCTTTAAAGAAGGATATGATAGCTTTTGAGGGTAGCAGCGGAGGGCAACCTTACCCCAAAAGCGAAAACTGTGCTCCCCCACCTCTTAATCCGTACAACCGAGGCTGCTCTAAAATATCTCGTTGTAGGTCTGATGATTGA

mRNA sequence

ATGTCGATGAGTTCTTGCAATGTCTCAATGGCCGAGCATGGTAACGAAGAGGAGCTGTTAGTGCAATCTGAGATGGGTAGAAGGTTTCTCGAAGAACAGAAGAAATATATCTCCATTGAAGCTTTAAAGAAGGATATGATAGCTTTTGAGGGTAGCAGCGGAGGGCAACCTTACCCCAAAAGCGAAAACTGTGCTCCCCCACCTCTTAATCCGTACAACCGAGGCTGCTCTAAAATATCTCGTTGTAGGTCTGATGATTGA

Coding sequence (CDS)

ATGTCGATGAGTTCTTGCAATGTCTCAATGGCCGAGCATGGTAACGAAGAGGAGCTGTTAGTGCAATCTGAGATGGGTAGAAGGTTTCTCGAAGAACAGAAGAAATATATCTCCATTGAAGCTTTAAAGAAGGATATGATAGCTTTTGAGGGTAGCAGCGGAGGGCAACCTTACCCCAAAAGCGAAAACTGTGCTCCCCCACCTCTTAATCCGTACAACCGAGGCTGCTCTAAAATATCTCGTTGTAGGTCTGATGATTGA

Protein sequence

MSMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRGCSKISRCRSDD

Homology

[Close]

BLAST of Carg15515 vs. NCBI nr
Match: XP_004147646.2 (PREDICTED: protein RALF-like 32 [Cucumis sativus] >KGN57227.1 hypothetical protein Csa_3G171840 [Cucumis sativus])

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 60/85 (70.59%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 2   SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKS 61
           S  SCN S+A   NEEE+L++SE+ RRFLE+QKKYISI ALKKD  A +G+SGGQPY +S
Sbjct: 44  STHSCNGSIAACANEEEMLMESEITRRFLEQQKKYISIGALKKDHPACDGASGGQPYTRS 103

Query: 62  ENCAPPPLNPYNRGCSKISRCRSDD 87
            +CAPPP NPYNRGCSKI RCRSDD
Sbjct: 104 GSCAPPPANPYNRGCSKIYRCRSDD 128

[Close]

BLAST of Carg15515 vs. NCBI nr
Match: XP_023528073.1 (protein RALF-like 32 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 60/85 (70.59%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 2   SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKS 61
           S  SCN S+AE G EEE L++SE+ RRFLE+QKKYISI ALKKD  A +G  GGQPY +S
Sbjct: 27  SKHSCNGSIAECGGEEETLMESEISRRFLEQQKKYISIGALKKDHPACDGGGGGQPYTRS 86

Query: 62  ENCAPPPLNPYNRGCSKISRCRSDD 87
            +CAPPP NPYNRGCSKI RCRSDD
Sbjct: 87  GSCAPPPANPYNRGCSKIYRCRSDD 111

[Close]

BLAST of Carg15515 vs. NCBI nr
Match: XP_022956250.1 (protein RALF-like 32 [Cucurbita moschata])

HSP 1 Score: 119.4 bits (298), Expect = 6.0e-24
Identity = 59/85 (69.41%), Postives = 67/85 (78.82%), Query Frame = 0


Query: 2   SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKS 61
           S  SCN S+AE G E+E L++SE+ RRFL +QKKYISI ALKKD  A +G  GGQPY KS
Sbjct: 27  SKHSCNGSIAECGGEDETLMESEISRRFLAQQKKYISIGALKKDHPACDGGGGGQPYTKS 86

Query: 62  ENCAPPPLNPYNRGCSKISRCRSDD 87
            +CAPPP NPYNRGCSKI RCRSDD
Sbjct: 87  GSCAPPPANPYNRGCSKIYRCRSDD 111

[Close]

BLAST of Carg15515 vs. NCBI nr
Match: XP_022138047.1 (protein RALF-like 32 [Momordica charantia])

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22
Identity = 56/83 (67.47%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 4   SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSEN 63
           S CN S+AE   E+E+L++SE+ RRFLE+QKKYISI ALKKD  A +GS  GQPY KS +
Sbjct: 35  SPCNGSIAECNTEKEMLMESEISRRFLEQQKKYISIGALKKDRPACDGSGRGQPYTKSGS 94

Query: 64  CAPPPLNPYNRGCSKISRCRSDD 87
           C PPP NPY+RGCSKI RCRSDD
Sbjct: 95  CVPPPSNPYDRGCSKIYRCRSDD 117

[Close]

BLAST of Carg15515 vs. NCBI nr
Match: XP_022138044.1 (protein RALF-like 32 [Momordica charantia])

HSP 1 Score: 99.8 bits (247), Expect = 4.9e-18
Identity = 50/83 (60.24%), Postives = 63/83 (75.90%), Query Frame = 0


Query: 2   SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKS 61
           SM+ CN S+AE   EEE+L++SE+ RRFLE+QKKYIS + LKKD  A +G   G+PY KS
Sbjct: 40  SMTPCNGSIAECYVEEEMLMESEISRRFLEQQKKYISYDTLKKDQPACQGGK-GKPYTKS 99

Query: 62  ENCAPPPLNPYNRGCSKISRCRS 85
           E+C PPP NPY+RGC  I RC+S
Sbjct: 100 ESCLPPPSNPYDRGCKPIYRCKS 121

[Close]

BLAST of Carg15515 vs. TAIR10
Match: AT4G14010.1 (ralf-like 32)

HSP 1 Score: 59.7 bits (143), Expect = 1.0e-09
Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 0


Query: 2   SMSSCNVSMAE-----HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQ 61
           S S CN S+AE        E  ++++S   +R  EEQ   +S  AL+++  A +G   G+
Sbjct: 30  SSSLCNGSVAECSSMVETEEMSVIMESWSSQRLTEEQAHKLSYGALRRNQPACDGGKRGE 89

Query: 62  PYPKSENCAPPPLNPYNRGCSKISRCRSD 86
            Y  S  C PPP NPY+RGCSK  RC  D
Sbjct: 90  SY--STQCLPPPSNPYSRGCSKHYRCGRD 116

[Close]

BLAST of Carg15515 vs. TAIR10
Match: AT1G02900.1 (rapid alkalinization factor 1)

HSP 1 Score: 52.8 bits (125), Expect = 1.3e-07
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 4   SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSEN 63
           S C+ S+AE    EE  + SE+ RR L    KYIS ++LK++ +    S  G  Y   +N
Sbjct: 45  SGCHGSIAECIGAEEEEMDSEINRRIL-ATTKYISYQSLKRNSVPC--SRRGASYYNCQN 104

Query: 64  CAPPPLNPYNRGCSKISRCRS 85
            A    NPY+RGCSKI+RCRS
Sbjct: 105 GA--QANPYSRGCSKIARCRS 120

[Close]

BLAST of Carg15515 vs. TAIR10
Match: AT3G23805.1 (ralf-like 24)

HSP 1 Score: 48.1 bits (113), Expect = 3.1e-06
Identity = 29/73 (39.73%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 14  GNEE-ELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPY 73
           G EE E ++ SE+ RR +  +K+YIS E L++DM+  +     +P      C     N Y
Sbjct: 45  GEEEGEEMMPSEISRRVMMMRKQYISYETLRRDMVPCQ-----KPGASYYACRSGQANAY 104

Query: 74  NRGCSKISRCRSD 86
           NRGCS I+RC  D
Sbjct: 105 NRGCSVITRCARD 112

[Close]

BLAST of Carg15515 vs. TAIR10
Match: AT4G13950.1 (ralf-like 31)

HSP 1 Score: 48.1 bits (113), Expect = 3.1e-06
Identity = 26/70 (37.14%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 16  EEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRG 75
           E+E L+ +E+ RR L  QK+YI  E L++DM+  +     +P     +C     N Y+RG
Sbjct: 43  EDEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQ-----KPGASYYDCRSGQANSYSRG 102

Query: 76  CSKISRCRSD 86
           C  I+RC  D
Sbjct: 103 CDTITRCARD 107

[Close]

BLAST of Carg15515 vs. TAIR10
Match: AT3G05490.1 (ralf-like 22)

HSP 1 Score: 47.8 bits (112), Expect = 4.0e-06
Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 0


Query: 4   SSCNVSMAE-HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSE 63
           S C  S+AE    EEE+   S++ RR L  QKKYIS  A++++ +    S  G  Y   +
Sbjct: 43  SGCTGSIAECIAEEEEMEFDSDISRRIL-AQKKYISYGAMRRNSVPC--SRRGASYYNCQ 102

Query: 64  NCAPPPLNPYNRGCSKISRCR 84
             A    NPY+RGCS I+RCR
Sbjct: 103 RGA--QANPYSRGCSTITRCR 118

[Close]

BLAST of Carg15515 vs. Swiss-Prot
Match: sp|O23262|RLF32_ARATH (Protein RALF-like 32 OS=Arabidopsis thaliana OX=3702 GN=RALFL32 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.8e-08
Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 0


Query: 2   SMSSCNVSMAE-----HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQ 61
           S S CN S+AE        E  ++++S   +R  EEQ   +S  AL+++  A +G   G+
Sbjct: 30  SSSLCNGSVAECSSMVETEEMSVIMESWSSQRLTEEQAHKLSYGALRRNQPACDGGKRGE 89

Query: 62  PYPKSENCAPPPLNPYNRGCSKISRCRSD 86
            Y  S  C PPP NPY+RGCSK  RC  D
Sbjct: 90  SY--STQCLPPPSNPYSRGCSKHYRCGRD 116

[Close]

BLAST of Carg15515 vs. Swiss-Prot
Match: sp|Q9SRY3|RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.3e-06
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 4   SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSEN 63
           S C+ S+AE    EE  + SE+ RR L    KYIS ++LK++ +    S  G  Y   +N
Sbjct: 45  SGCHGSIAECIGAEEEEMDSEINRRIL-ATTKYISYQSLKRNSVPC--SRRGASYYNCQN 104

Query: 64  CAPPPLNPYNRGCSKISRCRS 85
            A    NPY+RGCSKI+RCRS
Sbjct: 105 GA--QANPYSRGCSKIARCRS 120

[Close]

BLAST of Carg15515 vs. Swiss-Prot
Match: sp|Q945T0|RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.6e-05
Identity = 38/85 (44.71%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 2   SMSSCNVSMAE-HGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPK 61
           S   C  S+ E    EEE  + SE  RR L   KKYIS  AL+K+ +    S  G  Y  
Sbjct: 37  SGGGCKGSIGECIAEEEEFELDSESNRRIL-ATKKYISYGALQKNSVPC--SRRGASY-- 96

Query: 62  SENCAP-PPLNPYNRGCSKISRCRS 85
             NC P    NPY+RGCS I+RCRS
Sbjct: 97  -YNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of Carg15515 vs. Swiss-Prot
Match: sp|Q9LK37|RLF24_ARATH (Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.6e-05
Identity = 29/73 (39.73%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 14  GNEE-ELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPY 73
           G EE E ++ SE+ RR +  +K+YIS E L++DM+  +     +P      C     N Y
Sbjct: 45  GEEEGEEMMPSEISRRVMMMRKQYISYETLRRDMVPCQ-----KPGASYYACRSGQANAY 104

Query: 74  NRGCSKISRCRSD 86
           NRGCS I+RC  D
Sbjct: 105 NRGCSVITRCARD 112

[Close]

BLAST of Carg15515 vs. Swiss-Prot
Match: sp|Q2HIM9|RLF31_ARATH (Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 5.6e-05
Identity = 26/70 (37.14%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 16  EEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSENCAPPPLNPYNRG 75
           E+E L+ +E+ RR L  QK+YI  E L++DM+  +     +P     +C     N Y+RG
Sbjct: 43  EDEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQ-----KPGASYYDCRSGQANSYSRG 102

Query: 76  CSKISRCRSD 86
           C  I+RC  D
Sbjct: 103 CDTITRCARD 107

[Close]

BLAST of Carg15515 vs. TrEMBL
Match: tr|A0A0A0L9A8|A0A0A0L9A8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171840 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.0e-25
Identity = 60/85 (70.59%), Postives = 70/85 (82.35%), Query Frame = 0


Query: 2   SMSSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKS 61
           S  SCN S+A   NEEE+L++SE+ RRFLE+QKKYISI ALKKD  A +G+SGGQPY +S
Sbjct: 44  STHSCNGSIAACANEEEMLMESEITRRFLEQQKKYISIGALKKDHPACDGASGGQPYTRS 103

Query: 62  ENCAPPPLNPYNRGCSKISRCRSDD 87
            +CAPPP NPYNRGCSKI RCRSDD
Sbjct: 104 GSCAPPPANPYNRGCSKIYRCRSDD 128

[Close]

BLAST of Carg15515 vs. TrEMBL
Match: tr|A0A1S4C7B1|A0A1S4C7B1_TOBAC (protein RALF-like 32 OS=Nicotiana tabacum OX=4097 GN=LOC107815898 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.0e-17
Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 4   SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSEN 63
           S CN ++AE   E E+L++S++ RRFLEE+KKYIS  ALK+D     G  GG+PY  S +
Sbjct: 30  SPCNGTIAECNEELEILMESDISRRFLEERKKYISPGALKRDQPVCNGGGGGEPY--SRS 89

Query: 64  CAPPPLNPYNRGCSKISRCRSD 86
           C PPP NPYNRGCSK  RCR D
Sbjct: 90  CLPPPSNPYNRGCSKYYRCRGD 109

[Close]

BLAST of Carg15515 vs. TrEMBL
Match: tr|A0A1U7WNT9|A0A1U7WNT9_NICSY (protein RALF-like 32 isoform X1 OS=Nicotiana sylvestris OX=4096 GN=LOC104226143 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.0e-17
Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 4   SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSEN 63
           S CN ++AE   E E+L++S++ RRFLEE+KKYIS  ALK+D     G  GG+PY  S +
Sbjct: 30  SPCNGTIAECNEELEILMESDISRRFLEERKKYISPGALKRDQPVCNGGGGGEPY--SRS 89

Query: 64  CAPPPLNPYNRGCSKISRCRSD 86
           C PPP NPYNRGCSK  RCR D
Sbjct: 90  CLPPPSNPYNRGCSKYYRCRGD 109

[Close]

BLAST of Carg15515 vs. TrEMBL
Match: tr|I3RZ93|I3RZ93_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.0e-16
Identity = 48/82 (58.54%), Postives = 59/82 (71.95%), Query Frame = 0


Query: 4   SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSEN 63
           S+CN S+AE   E+ELL++SE+ RRFLEE ++YIS  ALK+D     G + G+ Y KS  
Sbjct: 32  STCNGSIAECNQEDELLMESEISRRFLEE-RRYISPGALKRDKPVCNGGASGEAYSKSGG 91

Query: 64  CAPPPLNPYNRGCSKISRCRSD 86
           C PPP NPYNRGCSK  RCRSD
Sbjct: 92  CLPPPSNPYNRGCSKYYRCRSD 112

[Close]

BLAST of Carg15515 vs. TrEMBL
Match: tr|B7FMN1|B7FMN1_MEDTR (RALF OS=Medicago truncatula OX=3880 GN=11417972 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-16
Identity = 48/82 (58.54%), Postives = 58/82 (70.73%), Query Frame = 0


Query: 4   SSCNVSMAEHGNEEELLVQSEMGRRFLEEQKKYISIEALKKDMIAFEGSSGGQPYPKSEN 63
           S CN S+AE   E+E L++SE+ RRFL EQ++YIS  ALK+D     G +GG+ Y KS  
Sbjct: 38  SICNGSIAECNQEDEQLMESEISRRFL-EQRRYISEGALKRDKPVCNGGAGGEAYSKSAG 97

Query: 64  CAPPPLNPYNRGCSKISRCRSD 86
           C PPP NPYNRGCSK  RCRSD
Sbjct: 98  CIPPPSNPYNRGCSKYYRCRSD 118

The following BLAST results are available for this feature:

BLAST of Carg15515 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147646.2	1.2e-24	70.59	PREDICTED: protein RALF-like 32 [Cucumis sativus] >KGN57227.1 hypothetical prote...	[more]
XP_023528073.1	1.2e-24	70.59	protein RALF-like 32 [Cucurbita pepo subsp. pepo]	[more]
XP_022956250.1	6.0e-24	69.41	protein RALF-like 32 [Cucurbita moschata]	[more]
XP_022138047.1	1.9e-22	67.47	protein RALF-like 32 [Momordica charantia]	[more]
XP_022138044.1	4.9e-18	60.24	protein RALF-like 32 [Momordica charantia]	[more]

BLAST of Carg15515 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14010.1	1.0e-09	40.45	ralf-like 32	[more]
AT1G02900.1	1.3e-07	44.44	rapid alkalinization factor 1	[more]
AT3G23805.1	3.1e-06	39.73	ralf-like 24	[more]
AT4G13950.1	3.1e-06	37.14	ralf-like 31	[more]
AT3G05490.1	4.0e-06	41.98	ralf-like 22	[more]

BLAST of Carg15515 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23262\|RLF32_ARATH	1.8e-08	40.45	Protein RALF-like 32 OS=Arabidopsis thaliana OX=3702 GN=RALFL32 PE=3 SV=1	[more]
sp\|Q9SRY3\|RLF1_ARATH	2.3e-06	44.44	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
sp\|Q945T0\|RALF_TOBAC	5.6e-05	44.71	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
sp\|Q9LK37\|RLF24_ARATH	5.6e-05	39.73	Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1	[more]
sp\|Q2HIM9\|RLF31_ARATH	5.6e-05	37.14	Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1	[more]

BLAST of Carg15515 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L9A8\|A0A0A0L9A8_CUCSA	8.0e-25	70.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171840 PE=4 SV=1	[more]
tr\|A0A1S4C7B1\|A0A1S4C7B1_TOBAC	8.0e-17	57.32	protein RALF-like 32 OS=Nicotiana tabacum OX=4097 GN=LOC107815898 PE=4 SV=1	[more]
tr\|A0A1U7WNT9\|A0A1U7WNT9_NICSY	8.0e-17	57.32	protein RALF-like 32 isoform X1 OS=Nicotiana sylvestris OX=4096 GN=LOC104226143 ...	[more]
tr\|I3RZ93\|I3RZ93_LOTJA	1.0e-16	58.54	Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1	[more]
tr\|B7FMN1\|B7FMN1_MEDTR	1.4e-16	58.54	RALF OS=Medicago truncatula OX=3880 GN=11417972 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15515-RA	Carg15515-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 17..83 e-value: 8.1E-19 score: 68.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..70
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 3..85
None	No IPR available	PANTHER	PTHR33136:SF3	PROTEIN RALF-LIKE 32	coord: 3..85

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15515	Cla021850	Watermelon (97103) v1	carwmB0692
Carg15515	Csa3G171840	Cucumber (Chinese Long) v2	carcuB0714
Carg15515	MELO3C006773	Melon (DHL92) v3.5.1	carmeB0693
Carg15515	CSPI03G15560	Wild cucumber (PI 183967)	carcpiB0728
Carg15515	Cucsa.251990	Cucumber (Gy14) v1	carcgyB0776
Carg15515	CmaCh14G015430	Cucurbita maxima (Rimu)	carcmaB0972
Carg15515	CmoCh06G015950	Cucurbita moschata (Rifu)	carcmoB0947
Carg15515	CmoCh14G015780	Cucurbita moschata (Rifu)	carcmoB0946
Carg15515	Lsi05G013670	Bottle gourd (USVL1VR-Ls)	carlsiB633
Carg15515	Cp4.1LG08g05550	Cucurbita pepo (Zucchini)	carcpeB0974
Carg15515	Cp4.1LG03g12150	Cucurbita pepo (Zucchini)	carcpeB0973
Carg15515	CsGy3G015610	Cucumber (Gy14) v2	carcgybB0691
Carg15515	MELO3C006773.2	Melon (DHL92) v3.6.1	carmedB0706
Carg15515	CsaV3_3G015740	Cucumber (Chinese Long) v3	carcucB0731
Carg15515	Cla97C05G088730	Watermelon (97103) v2	carwmbB0720
Carg15515	Bhi01G000843	Wax gourd	carwgoB0817

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15515	Carg24781	Silver-seed gourd	carcarB579

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15515	Cucurbita maxima (Rimu)	carcmaB0974
Carg15515	Watermelon (Charleston Gray)	carwcgB0668