Cp4.1LG03g12150 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g12150
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	RALF
Location	Cp4.1LG03 : 10506138 .. 10506473 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAACAAGAATCTCAAAATCTTGCTTTCTTCTCTTTCTCCTCCTCGTTCAAGATCTTTGTCTCGTTCGAGCTTCGTCGAAGCACTCTTGCAATGGCTCCATAGCTGAGTGTGGTGGTGAAGAAGAGACGTTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGAACAGCAAAAGAAATACATCTCCATTGGAGCTTTGAAGAAGGATCACCCAGCTTGTGATGGTGGTGGCGGTGGTCAACCTTACACTAGAAGTGGAAGCTGCGCTCCACCGCCAGCTAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCTGACGATTGA

mRNA sequence

ATGACAACAAGAATCTCAAAATCTTGCTTTCTTCTCTTTCTCCTCCTCGTTCAAGATCTTTGTCTCGTTCGAGCTTCGTCGAAGCACTCTTGCAATGGCTCCATAGCTGAGTGTGGTGGTGAAGAAGAGACGTTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGAACAGCAAAAGAAATACATCTCCATTGGAGCTTTGAAGAAGGATCACCCAGCTTGTGATGGTGGTGGCGGTGGTCAACCTTACACTAGAAGTGGAAGCTGCGCTCCACCGCCAGCTAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCTGACGATTGA

Coding sequence (CDS)

ATGACAACAAGAATCTCAAAATCTTGCTTTCTTCTCTTTCTCCTCCTCGTTCAAGATCTTTGTCTCGTTCGAGCTTCGTCGAAGCACTCTTGCAATGGCTCCATAGCTGAGTGTGGTGGTGAAGAAGAGACGTTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGAACAGCAAAAGAAATACATCTCCATTGGAGCTTTGAAGAAGGATCACCCAGCTTGTGATGGTGGTGGCGGTGGTCAACCTTACACTAGAAGTGGAAGCTGCGCTCCACCGCCAGCTAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCTGACGATTGA

Protein sequence

MTTRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLEQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSDD

Homology

[Close]

BLAST of Cp4.1LG03g12150 vs. Swiss-Prot
Match: RLF32_ARATH (Protein RALF-like 32 OS=Arabidopsis thaliana GN=RALFL32 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.3e-19
Identity = 53/113 (46.90%), Postives = 69/113 (61.06%), Query Frame = 1


Query: 3   TRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEET-----LMESEISRRFLEQ 62
           +RI  +  + FL L+      +ASS   CNGS+AEC    ET     +MES  S+R  E+
Sbjct: 6   SRIFSTITIFFLCLLLAHVTSKASSSSLCNGSVAECSSMVETEEMSVIMESWSSQRLTEE 65

Query: 63  QKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSD 111
           Q   +S GAL+++ PACDGG  G+ Y  S  C PPP+NPY+RGCSK YRC  D
Sbjct: 66  QAHKLSYGALRRNQPACDGGKRGESY--STQCLPPPSNPYSRGCSKHYRCGRD 116

[Close]

BLAST of Cp4.1LG03g12150 vs. Swiss-Prot
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.9e-11
Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 1


Query: 31  CNGSIAECGGEEETLMESEISRRFLEQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCA 90
           C+GSIAEC G EE  M+SEI+RR L    KYIS  +LK++   C   G      ++G+  
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRIL-ATTKYISYQSLKRNSVPCSRRGASYYNCQNGA-- 106

Query: 91  PPPANPYNRGCSKIYRCRS 110
              ANPY+RGCSKI RCRS
Sbjct: 107 --QANPYSRGCSKIARCRS 120

[Close]

BLAST of Cp4.1LG03g12150 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.6e-10
Identity = 41/86 (47.67%), Postives = 49/86 (56.98%), Query Frame = 1


Query: 25  ASSKHSCNGSIAECGGEEETL-MESEISRRFLEQQKKYISIGALKKDHPACDGGGGGQPY 84
           A S   C GSI EC  EEE   ++SE +RR L   KKYIS GAL+K+   C   G     
Sbjct: 35  ARSGGGCKGSIGECIAEEEEFELDSESNRRILAT-KKYISYGALQKNSVPCSRRGASYYN 94

Query: 85  TRSGSCAPPPANPYNRGCSKIYRCRS 110
            + G+     ANPY+RGCS I RCRS
Sbjct: 95  CKPGA----QANPYSRGCSAITRCRS 115

[Close]

BLAST of Cp4.1LG03g12150 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.6e-10
Identity = 40/81 (49.38%), Postives = 48/81 (59.26%), Query Frame = 1


Query: 31  CNGSIAECG---GEEETLMESEISRRFLEQQKKYISIGALKKDHPACDGGGGGQPYTRSG 90
           CNG+IAEC     EEE  M+SEI+RR L    KYIS GAL+++   C   G      R G
Sbjct: 40  CNGTIAECSLSTAEEEFEMDSEINRRILATT-KYISYGALRRNTVPCSRRGASYYNCRRG 99

Query: 91  SCAPPPANPYNRGCSKIYRCR 109
           +     ANPY+RGCS I RCR
Sbjct: 100 A----QANPYSRGCSAITRCR 115

[Close]

BLAST of Cp4.1LG03g12150 vs. Swiss-Prot
Match: RLF24_ARATH (Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.2e-08
Identity = 37/79 (46.84%), Postives = 43/79 (54.43%), Query Frame = 1


Query: 32  NGSIAECGGEEETLMESEISRRFLEQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAP 91
           NG I E  GEE  +M SEISRR +  +K+YIS   L++D   C   G      RSG    
Sbjct: 41  NGVIGEEEGEE--MMPSEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQ--- 100

Query: 92  PPANPYNRGCSKIYRCRSD 111
             AN YNRGCS I RC  D
Sbjct: 101 --ANAYNRGCSVITRCARD 112

[Close]

BLAST of Cp4.1LG03g12150 vs. TrEMBL
Match: A0A0A0L9A8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171840 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.5e-46
Identity = 93/109 (85.32%), Postives = 96/109 (88.07%), Query Frame = 1


Query: 7   KSCFLL----FLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLEQQKKYI 66
           ++CFLL    FL L QDLCLVRASS HSCNGSIA C  EEE LMESEI+RRFLEQQKKYI
Sbjct: 20  QTCFLLLLFLFLFLFQDLCLVRASSTHSCNGSIAACANEEEMLMESEITRRFLEQQKKYI 79

Query: 67  SIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSDD 112
           SIGALKKDHPACDG  GGQPYTRSGSCAPPPANPYNRGCSKIYRCRSDD
Sbjct: 80  SIGALKKDHPACDGASGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSDD 128

[Close]

BLAST of Cp4.1LG03g12150 vs. TrEMBL
Match: C6T1A5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G151400 PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.1e-28
Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = 1


Query: 2   TTRISKSC-FLLFLLLVQDLCLVRASSKHS--CNGSIAECGGEEETLMESEISRRFLEQQ 61
           T R+   C F+LF  +    C V +   H+  CNGSIAEC  E+E LMESEISRRFLEQ+
Sbjct: 7   TIRLLCFCYFMLFSFMHFSSCTVFSLKSHASTCNGSIAECNQEDELLMESEISRRFLEQK 66

Query: 62  KKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSD 111
           + YIS GAL++D P C+GGG G+ Y+++G C PPP+NP NRGCSK YRCRSD
Sbjct: 67  RSYISNGALQRDKPVCNGGGSGEAYSKTGGCLPPPSNPQNRGCSKYYRCRSD 118

[Close]

BLAST of Cp4.1LG03g12150 vs. TrEMBL
Match: A0A0A0L624_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171850 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.2e-28
Identity = 70/98 (71.43%), Postives = 75/98 (76.53%), Query Frame = 1


Query: 7   KSCFLLFLLL---VQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLEQQKK-YI 66
           ++CFLL L L   +QDLCLVR SS HSCNGSIAEC  EEE LMESEI+RRFL QQKK YI
Sbjct: 4   QTCFLLLLFLSFLLQDLCLVRGSSMHSCNGSIAECANEEEMLMESEITRRFLAQQKKNYI 63

Query: 67  SIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG 101
           S   LKKD PACD G  GQPYT+SGSC P  ANPYN G
Sbjct: 64  SYPTLKKDRPACD-GASGQPYTKSGSCVPSQANPYNPG 100

[Close]

BLAST of Cp4.1LG03g12150 vs. TrEMBL
Match: K7L602_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-27
Identity = 64/112 (57.14%), Postives = 81/112 (72.32%), Query Frame = 1


Query: 2   TTRISKSC-FLLFLLLVQDLCLVRASSKHS--CNGSIAECGGEEETLMESEISRRFLEQQ 61
           T R+   C F+LF  +    C V +   H+  CNGSIAEC  E+E LMESEISRRFLEQ+
Sbjct: 69  TIRLVCFCYFMLFSSMHFTSCTVLSLKSHASTCNGSIAECNQEDELLMESEISRRFLEQK 128

Query: 62  KKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSD 111
           + YIS GAL++D P C+GGG G+ Y+++G C PPP+NP +RGCSK YRCRSD
Sbjct: 129 RSYISNGALQRDKPVCNGGGSGEAYSKTGGCLPPPSNPQSRGCSKYYRCRSD 180

[Close]

BLAST of Cp4.1LG03g12150 vs. TrEMBL
Match: A0A0R0IK43_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G108200 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-27
Identity = 64/112 (57.14%), Postives = 81/112 (72.32%), Query Frame = 1


Query: 2   TTRISKSC-FLLFLLLVQDLCLVRASSKHS--CNGSIAECGGEEETLMESEISRRFLEQQ 61
           T R+   C F+LF  +    C V +   H+  CNGSIAEC  E+E LMESEISRRFLEQ+
Sbjct: 7   TIRLVCFCYFMLFSSMHFTSCTVLSLKSHASTCNGSIAECNQEDELLMESEISRRFLEQK 66

Query: 62  KKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSD 111
           + YIS GAL++D P C+GGG G+ Y+++G C PPP+NP +RGCSK YRCRSD
Sbjct: 67  RSYISNGALQRDKPVCNGGGSGEAYSKTGGCLPPPSNPQSRGCSKYYRCRSD 118

[Close]

BLAST of Cp4.1LG03g12150 vs. TAIR10
Match: AT4G14010.1 (AT4G14010.1 ralf-like 32)

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-20
Identity = 53/113 (46.90%), Postives = 69/113 (61.06%), Query Frame = 1


Query: 3   TRISKSCFLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEET-----LMESEISRRFLEQ 62
           +RI  +  + FL L+      +ASS   CNGS+AEC    ET     +MES  S+R  E+
Sbjct: 6   SRIFSTITIFFLCLLLAHVTSKASSSSLCNGSVAECSSMVETEEMSVIMESWSSQRLTEE 65

Query: 63  QKKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSD 111
           Q   +S GAL+++ PACDGG  G+ Y  S  C PPP+NPY+RGCSK YRC  D
Sbjct: 66  QAHKLSYGALRRNQPACDGGKRGESY--STQCLPPPSNPYSRGCSKHYRCGRD 116

[Close]

BLAST of Cp4.1LG03g12150 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1)

HSP 1 Score: 68.9 bits (167), Expect = 2.2e-12
Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 1


Query: 31  CNGSIAECGGEEETLMESEISRRFLEQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCA 90
           C+GSIAEC G EE  M+SEI+RR L    KYIS  +LK++   C   G      ++G+  
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRIL-ATTKYISYQSLKRNSVPCSRRGASYYNCQNGA-- 106

Query: 91  PPPANPYNRGCSKIYRCRS 110
              ANPY+RGCSKI RCRS
Sbjct: 107 --QANPYSRGCSKIARCRS 120

[Close]

BLAST of Cp4.1LG03g12150 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 65.1 bits (157), Expect = 3.2e-11
Identity = 40/81 (49.38%), Postives = 48/81 (59.26%), Query Frame = 1


Query: 31  CNGSIAECG---GEEETLMESEISRRFLEQQKKYISIGALKKDHPACDGGGGGQPYTRSG 90
           CNG+IAEC     EEE  M+SEI+RR L    KYIS GAL+++   C   G      R G
Sbjct: 40  CNGTIAECSLSTAEEEFEMDSEINRRILATT-KYISYGALRRNTVPCSRRGASYYNCRRG 99

Query: 91  SCAPPPANPYNRGCSKIYRCR 109
           +     ANPY+RGCS I RCR
Sbjct: 100 A----QANPYSRGCSAITRCR 115

[Close]

BLAST of Cp4.1LG03g12150 vs. TAIR10
Match: AT3G23805.1 (AT3G23805.1 ralf-like 24)

HSP 1 Score: 58.5 bits (140), Expect = 2.9e-09
Identity = 37/79 (46.84%), Postives = 43/79 (54.43%), Query Frame = 1


Query: 32  NGSIAECGGEEETLMESEISRRFLEQQKKYISIGALKKDHPACDGGGGGQPYTRSGSCAP 91
           NG I E  GEE  +M SEISRR +  +K+YIS   L++D   C   G      RSG    
Sbjct: 41  NGVIGEEEGEE--MMPSEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQ--- 100

Query: 92  PPANPYNRGCSKIYRCRSD 111
             AN YNRGCS I RC  D
Sbjct: 101 --ANAYNRGCSVITRCARD 112

[Close]

BLAST of Cp4.1LG03g12150 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 57.4 bits (137), Expect = 6.6e-09
Identity = 40/95 (42.11%), Postives = 50/95 (52.63%), Query Frame = 1


Query: 31  CNGSIAEC---------------GGE--EETLMESEISRRFLEQQKKYISIGALKKDHPA 90
           C G+IAEC               GGE  EE  M+SEI+RR L   ++YIS GAL+++   
Sbjct: 47  CRGTIAECSVSAALGDGGDLFYGGGEMGEEFEMDSEINRRILAT-RRYISYGALRRNTIP 106

Query: 91  CDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCR 109
           C   G      R G+     ANPY+RGCS I RCR
Sbjct: 107 CSRRGASYYNCRRGA----QANPYSRGCSAITRCR 136

[Close]

BLAST of Cp4.1LG03g12150 vs. NCBI nr
Match: gi|778679218|ref|XP_004147646.2| (PREDICTED: protein RALF-like 32 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-45
Identity = 93/109 (85.32%), Postives = 96/109 (88.07%), Query Frame = 1


Query: 7   KSCFLL----FLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLEQQKKYI 66
           ++CFLL    FL L QDLCLVRASS HSCNGSIA C  EEE LMESEI+RRFLEQQKKYI
Sbjct: 20  QTCFLLLLFLFLFLFQDLCLVRASSTHSCNGSIAACANEEEMLMESEITRRFLEQQKKYI 79

Query: 67  SIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSDD 112
           SIGALKKDHPACDG  GGQPYTRSGSCAPPPANPYNRGCSKIYRCRSDD
Sbjct: 80  SIGALKKDHPACDGASGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSDD 128

[Close]

BLAST of Cp4.1LG03g12150 vs. NCBI nr
Match: gi|659077106|ref|XP_008439036.1| (PREDICTED: protein RALF-like 32 [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 1.6e-44
Identity = 90/106 (84.91%), Postives = 95/106 (89.62%), Query Frame = 1


Query: 9   CFLL---FLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLEQQKKYISIG 68
           CFLL   FL L+QDLCLVRASS HSCNGSIAECG E+E LMESEISRRFL QQKKYISIG
Sbjct: 15  CFLLLLLFLFLLQDLCLVRASSTHSCNGSIAECGSEDEILMESEISRRFLAQQKKYISIG 74

Query: 69  ALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSDD 112
           ALKKDHPACDG  GG+PYT+SGSCAPPPANPY+RGC KIYRCRSDD
Sbjct: 75  ALKKDHPACDGASGGRPYTKSGSCAPPPANPYDRGCPKIYRCRSDD 120

[Close]

BLAST of Cp4.1LG03g12150 vs. NCBI nr
Match: gi|351722809|ref|NP_001235977.1| (uncharacterized protein LOC100500295 precursor [Glycine max])

HSP 1 Score: 132.1 bits (331), Expect = 6.0e-28
Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = 1


Query: 2   TTRISKSC-FLLFLLLVQDLCLVRASSKHS--CNGSIAECGGEEETLMESEISRRFLEQQ 61
           T R+   C F+LF  +    C V +   H+  CNGSIAEC  E+E LMESEISRRFLEQ+
Sbjct: 7   TIRLLCFCYFMLFSFMHFSSCTVFSLKSHASTCNGSIAECNQEDELLMESEISRRFLEQK 66

Query: 62  KKYISIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSD 111
           + YIS GAL++D P C+GGG G+ Y+++G C PPP+NP NRGCSK YRCRSD
Sbjct: 67  RSYISNGALQRDKPVCNGGGSGEAYSKTGGCLPPPSNPQNRGCSKYYRCRSD 118

[Close]

BLAST of Cp4.1LG03g12150 vs. NCBI nr
Match: gi|697103835|ref|XP_009605720.1| (PREDICTED: protein RALF-like 32 [Nicotiana tomentosiformis])

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-27
Identity = 64/101 (63.37%), Postives = 77/101 (76.24%), Query Frame = 1


Query: 10  FLLFLLLVQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLEQQKKYISIGALKK 69
           F LFL L+    +   + +  CNG+IAEC  E E LMES+ISRRFLE++KKYIS GALK+
Sbjct: 13  FTLFLTLL--FIITSVTGQSPCNGTIAECNEELEILMESDISRRFLEERKKYISPGALKR 72

Query: 70  DHPACDGGGGGQPYTRSGSCAPPPANPYNRGCSKIYRCRSD 111
           D P C+GGGGG+PY+R  SC PPP+NPYNRGCSK YRCR D
Sbjct: 73  DQPVCNGGGGGEPYSR--SCLPPPSNPYNRGCSKYYRCRGD 109

[Close]

BLAST of Cp4.1LG03g12150 vs. NCBI nr
Match: gi|700202095|gb|KGN57228.1| (hypothetical protein Csa_3G171850 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-27
Identity = 70/98 (71.43%), Postives = 75/98 (76.53%), Query Frame = 1


Query: 7   KSCFLLFLLL---VQDLCLVRASSKHSCNGSIAECGGEEETLMESEISRRFLEQQKK-YI 66
           ++CFLL L L   +QDLCLVR SS HSCNGSIAEC  EEE LMESEI+RRFL QQKK YI
Sbjct: 4   QTCFLLLLFLSFLLQDLCLVRGSSMHSCNGSIAECANEEEMLMESEITRRFLAQQKKNYI 63

Query: 67  SIGALKKDHPACDGGGGGQPYTRSGSCAPPPANPYNRG 101
           S   LKKD PACD G  GQPYT+SGSC P  ANPYN G
Sbjct: 64  SYPTLKKDRPACD-GASGQPYTKSGSCVPSQANPYNPG 100

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g12150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLF32_ARATH	2.3e-19	46.90	Protein RALF-like 32 OS=Arabidopsis thaliana GN=RALFL32 PE=3 SV=1	[more]
RLF1_ARATH	3.9e-11	50.63	Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1	[more]
RALF_TOBAC	5.6e-10	47.67	Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1	[more]
RLF33_ARATH	5.6e-10	49.38	Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1	[more]
RLF24_ARATH	5.2e-08	46.84	Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1	[more]

BLAST of Cp4.1LG03g12150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9A8_CUCSA	7.5e-46	85.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171840 PE=4 SV=1	[more]
C6T1A5_SOYBN	4.1e-28	58.04	Uncharacterized protein OS=Glycine max GN=GLYMA_05G151400 PE=2 SV=1	[more]
A0A0A0L624_CUCSA	9.2e-28	71.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171850 PE=4 SV=1	[more]
K7L602_SOYBN	2.7e-27	57.14	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A0A0R0IK43_SOYBN	2.7e-27	57.14	Uncharacterized protein OS=Glycine max GN=GLYMA_08G108200 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g12150 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14010.1	1.3e-20	46.90	ralf-like 32	[more]
AT1G02900.1	2.2e-12	50.63	rapid alkalinization factor 1	[more]
AT4G15800.1	3.2e-11	49.38	ralf-like 33	[more]
AT3G23805.1	2.9e-09	46.84	ralf-like 24	[more]
AT3G16570.1	6.6e-09	42.11	rapid alkalinization factor 23	[more]

BLAST of Cp4.1LG03g12150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778679218\|ref\|XP_004147646.2\|	1.1e-45	85.32	PREDICTED: protein RALF-like 32 [Cucumis sativus]	[more]
gi\|659077106\|ref\|XP_008439036.1\|	1.6e-44	84.91	PREDICTED: protein RALF-like 32 [Cucumis melo]	[more]
gi\|351722809\|ref\|NP_001235977.1\|	6.0e-28	58.04	uncharacterized protein LOC100500295 precursor [Glycine max]	[more]
gi\|697103835\|ref\|XP_009605720.1\|	1.0e-27	63.37	PREDICTED: protein RALF-like 32 [Nicotiana tomentosiformis]	[more]
gi\|700202095\|gb\|KGN57228.1\|	1.3e-27	71.43	hypothetical protein Csa_3G171850 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007154	cell communication
biological_process	GO:0044700	single organism signaling
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g12150.1	Cp4.1LG03g12150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 42..108 score: 2.6
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 10..111 score: 1.8
None	No IPR available	PANTHER	PTHR33136:SF3	PROTEIN RALF-LIKE 32	coord: 10..111 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g12150	CmoCh06G015950	Cucurbita moschata (Rifu)	cmocpeB787
Cp4.1LG03g12150	Cla021850	Watermelon (97103) v1	cpewmB613
Cp4.1LG03g12150	Lsi05G013670	Bottle gourd (USVL1VR-Ls)	cpelsiB507
Cp4.1LG03g12150	Bhi01G000843	Wax gourd	cpewgoB0783
Cp4.1LG03g12150	Carg15515	Silver-seed gourd	carcpeB0973

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG03g12150	Cp4.1LG08g05550	Cucurbita pepo (Zucchini)	cpecpeB482

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g12150	Cucumber (Gy14) v2	cgybcpeB406
Cp4.1LG03g12150	Melon (DHL92) v3.6.1	cpemedB693
Cp4.1LG03g12150	Melon (DHL92) v3.6.1	cpemedB701
Cp4.1LG03g12150	Silver-seed gourd	carcpeB1446
Cp4.1LG03g12150	Cucumber (Chinese Long) v3	cpecucB0759
Cp4.1LG03g12150	Cucumber (Gy14) v1	cgycpeB0682
Cp4.1LG03g12150	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g12150	Cucurbita maxima (Rimu)	cmacpeB837
Cp4.1LG03g12150	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g12150	Wild cucumber (PI 183967)	cpecpiB611
Cp4.1LG03g12150	Cucumber (Chinese Long) v2	cpecuB609
Cp4.1LG03g12150	Bottle gourd (USVL1VR-Ls)	cpelsiB490
Cp4.1LG03g12150	Watermelon (Charleston Gray)	cpewcgB554
Cp4.1LG03g12150	Watermelon (Charleston Gray)	cpewcgB559
Cp4.1LG03g12150	Watermelon (97103) v1	cpewmB619
Cp4.1LG03g12150	Melon (DHL92) v3.5.1	cpemeB585