CmaCh14G021470 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G021470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Chromosome 3B, genomic scaffold, cultivar Chinese Spring
Location	Cma_Chr14 : 14702910 .. 14705550 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGATAAGGAGGCAGTGGAGGAGGGGACTACCAACGGAGGAGGTGACCTGAACCCAAATGCAAAGGAGTGGAGCCCCATTCACGATTCCGCGCCGGAGGAAGATCGCTGCCTGTTTCTGACCTTCTCCAATGGGTACCCGCTGACTGAGCACCAGATCGTCCACTTCTTCACCCGGTACGCACGCACGCATGCCCTGTTTTTATTAAAGAATTGGATATATTATATAATTTTTGATGTAGACAATTCGGAGCGTGCATTGAGAGGGTGTATGTGCACTACCGTGAGGGAGGGAAGGAACCGCCGTTGTTTGGGAAGGTGGTGTTTGTGGCGTCTTCGATACCAGCCATCATTCTGGAAGGGAAAGATGAAGCCAAGTTTTGTATTGAGAGCAGGACGATGTGGTGTAAGAGGTACGAGGCCAGAAAGGCTCGCTACAGGCTTTGCCGAGGGCGATGATGAACCAACTCATCCAAATCACCGCCGCCGCCGCCGCCGCCACCACCACCACCACCCTTATCATCATGTTCTCATATCAGATCAAGAGTATCTTTGGTTCCAATAAATTAGAGAACTGTTTCATTAATTAATCTCCGTTTTCTTCTTCCTTTTCTTATTTCAATATCCAAACAGTGCACTAATCTTATTAAAACAAAACAAAAAATGAAATGAACTTGAGGATGCATGAGGGAGAAGGAGGGGACTCATGGTTGACTTCCTGTAAACAAATATAAGGTAACTTTTTTTGCGCATTAAAATTGGGTAACCGTATTAGAGGTTTTGAGTCCAGTAAAACCTGGAATTGGGCCACACCTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCAAAGGGATAAAATCATCTCTAAACAAACTAACTTTGACCATTTGTCTGCATTCATCGCTTGCATAATTTATTCAATATTACCATATTTGCCCACAAATAATTATGATTAAATTCTCAATTTAATCCTTTATATATATAATATTTATTTCAATGCTCTAATAATAAAAACTTCAACTCACCTGCACAATTGTAGGAAAACGTTACTTTTTTTAAAAAAAAAAAAAAATTAATAAAATGTAATAACATTTAAATCAAACATATAATGTGTGTTAACAAGTTGCATGCTTCAAACAAACAATTAATAAAAAGTTTCTTTTAAATGTTTTAATTAAGAGGTGTAAAGTTTAGATTAGACCTCTTAATCAGCATAATAAATACAATATTAGTAGATGCAACTCTTCAGACAAGTACACTCCCTCTGGAGTGGGACCCACTTCAAAAATGTTCGAATACTTTTTATTCTCTTCAGGTTATTTGTATAAAGTAGCGTTTGACAAGTGCGAAGATTCATAATATAATTATATAACATTTACTTCGTCACATACCCAAACAGCAAAACAAAAAGAGCACCGATTTTGCCTTTACTTCGTGTTTTCCCACATCTGTGACCATTTCTGGCGGCACCCACACGATTTTGGTTTCAATTTTGGCAAGTATAGCAACGTTGTACTCCCTTTCCCCACATTGTTTGACACTTTCCCACACCCAACCGACTTTAGTTTTGGGTTTCCCGCTCCCTAACAAATTCAAATATGGGATTAAGCTTATTCGATCAACCAGCAAGCATTTGATGCTGCTGTTTGGCAGCTTTCAAAAGATAATAGGAGTAGTTCGAACCGCGATTCAAACGCGCTTTCCAGCGAAGTTTTGAACCCGTATGGTGAGTTTCAGTAGGTGACAACACACTTTGGCCCTTTTCGAACTTGTTTTTAGTGCTGTAAATTAGTTTATAATAGTTATTGGGATCTCTCTGTTTGTTGTTCCGAACTGATTCCAAGTGTTCGATTTGAGGTTTAATGTTTTGGGTAAGAATATTAATTCTCCACCCAACACTCTCTGGAAGAACTCTGAATAAGGTTCCGAACTGAGTTCTACCCTTGGAACCTTGTTTATATTGCTTTAGAATGTTAGGTTTCTGAATATTCGAATATGTTGTACTCTTGTGTTGATATGGTAATGACTGGGATGTTGGAAGTGTTGTTATGTGTTCTTGTGATTTATGAGGATGATGGTTTTGTTGCGCATATCTTGATATATGTTGAGAGAGTGTTGTTATATGACTCATGCATTTTGGTGAGATTGTATGAGAAAGTGGTCTAAAGACTGTTTACATAAAGGAAAGTTGGGTGAATATCAGGTGCTTCGGTTGAATGACCGACCCTTCTTCCCTTTCTGTTCTCATCAGCTGCTGTAACCTTTTACTTTCCCTTTGTACTGACGATTCTTCATATGTTCTCTTCTTTCAGCTTCCCATTTATAGGCTTTGTTTGTCAAGGTTTAACAATTTAATACATTGGTCCTACAGGTCCTCTGGACTTCATCGCATATGGTGGGGTCGGCTTCGAAAAAGGGGGGAGAAACTCACAAGCAGCTGACAGTGGGTCTGACCATTTTGAAGACATGGATGATTTGGAACTTTCTGTATGTTAGTATGTTTTTTTGGTATAGAGTAATTTATTTCCTTGAACTTCATAGCTTATTTCATTGAGCATTATAGCTAGGTTGGGGAAGAGGAGTACTTGAGCGCCGAAGACAACAAATCTGA

mRNA sequence

ATGGGTGATAAGGAGGCAGTGGAGGAGGGGACTACCAACGGAGGAGGTGACCTGAACCCAAATGCAAAGGAGTGGAGCCCCATTCACGATTCCGCGCCGGAGGAAGATCGCTGCCTGTTTCTGACCTTCTCCAATGGGTACCCGCTGACTGAGCACCAGATCGTCCACTTCTTCACCCGACAATTCGGAGCGTGCATTGAGAGGGTGTATGTGCACTACCGTGAGGGAGGGAAGGAACCGCCGTTGTTTGGGAAGGTGGTGTTTGTGGCGTCTTCGATACCAGCCATCATTCTGGAAGGGAAAGATGAAGCCAAGTTTTGTATTGAGAGCAGGACGATGTGGTCTTATTCGATCAACCAGCAAGCATTTGATGCTGCTGTTTGGCAGCTTTCAAAAGATAATAGGAGTAGTTCGAACCGCGATTCAAACGCGCTTTCCAGCGAAGTTTTGAACCCGTATGGTCCTCTGGACTTCATCGCATATGGTGGGGTCGGCTTCGAAAAAGGGGGGAGAAACTCACAAGCAGCTGACAGTGGGTCTGACCATTTTGAAGACATGGATGATTTGGAACTTTCTCTAGGTTGGGGAAGAGGAGTACTTGAGCGCCGAAGACAACAAATCTGA

Coding sequence (CDS)

ATGGGTGATAAGGAGGCAGTGGAGGAGGGGACTACCAACGGAGGAGGTGACCTGAACCCAAATGCAAAGGAGTGGAGCCCCATTCACGATTCCGCGCCGGAGGAAGATCGCTGCCTGTTTCTGACCTTCTCCAATGGGTACCCGCTGACTGAGCACCAGATCGTCCACTTCTTCACCCGACAATTCGGAGCGTGCATTGAGAGGGTGTATGTGCACTACCGTGAGGGAGGGAAGGAACCGCCGTTGTTTGGGAAGGTGGTGTTTGTGGCGTCTTCGATACCAGCCATCATTCTGGAAGGGAAAGATGAAGCCAAGTTTTGTATTGAGAGCAGGACGATGTGGTCTTATTCGATCAACCAGCAAGCATTTGATGCTGCTGTTTGGCAGCTTTCAAAAGATAATAGGAGTAGTTCGAACCGCGATTCAAACGCGCTTTCCAGCGAAGTTTTGAACCCGTATGGTCCTCTGGACTTCATCGCATATGGTGGGGTCGGCTTCGAAAAAGGGGGGAGAAACTCACAAGCAGCTGACAGTGGGTCTGACCATTTTGAAGACATGGATGATTTGGAACTTTCTCTAGGTTGGGGAAGAGGAGTACTTGAGCGCCGAAGACAACAAATCTGA

Protein sequence

MGDKEAVEEGTTNGGGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMWSYSINQQAFDAAVWQLSKDNRSSSNRDSNALSSEVLNPYGPLDFIAYGGVGFEKGGRNSQAADSGSDHFEDMDDLELSLGWGRGVLERRRQQI

Homology

[Close]

BLAST of CmaCh14G021470 vs. TrEMBL
Match: A0A0A0L3N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118030 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-35
Identity = 75/100 (75.00%), Postives = 85/100 (85.00%), Query Frame = 1


Query: 15  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHYR 74
           G DLNPNAKEW+PI+D APEEDRCLFLTFSNG+PLTE+QIV FFT        RVYVHY 
Sbjct: 9   GADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT--------RVYVHYP 68

Query: 75  EGGKEPPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMW 115
           EGGK+ PLFGKVVFVASSIPAI+L GK+EAKF I+++TMW
Sbjct: 69  EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMW 100

[Close]

BLAST of CmaCh14G021470 vs. TrEMBL
Match: B9MV19_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05440g PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.5e-31
Identity = 65/107 (60.75%), Postives = 81/107 (75.70%), Query Frame = 1


Query: 15  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHYR 74
           G  LNP+AKEW+P+ + A EE+RCLFLTFSNGYPLTE QI  FFT  +G+C+ERVYVH+ 
Sbjct: 168 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 227

Query: 75  EGGKE--PPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMWSYSIN 120
           E   +  PPLFGKVVF AS IPA+IL GK EAKF ++++ +W    N
Sbjct: 228 EPKDQGAPPLFGKVVFTASYIPAMILNGKTEAKFWVDAKPLWGKRFN 274

[Close]

BLAST of CmaCh14G021470 vs. TrEMBL
Match: V4TYD6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024012mg PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-29
Identity = 63/99 (63.64%), Postives = 75/99 (75.76%), Query Frame = 1


Query: 18  LNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHYRE-- 77
           LNP AKEW+P  + APEEDRCLFLTFSNGYPL E+QIV FFT +FG C+E+VYVH  E  
Sbjct: 46  LNPCAKEWNPFKERAPEEDRCLFLTFSNGYPLAENQIVTFFTNKFGPCVEKVYVHSPEPT 105

Query: 78  GGKEPPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMW 115
              EPPLFGKVVF AS IPA+IL G  + KF ++ + +W
Sbjct: 106 SVSEPPLFGKVVFTASYIPAVILCGAKQTKFMVDGKPLW 144

[Close]

BLAST of CmaCh14G021470 vs. TrEMBL
Match: A0A067K989_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14611 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.4e-29
Identity = 61/100 (61.00%), Postives = 79/100 (79.00%), Query Frame = 1


Query: 18  LNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHY---R 77
           LNP AKEW+P  + APEEDRCLFLTFSNGYPLTE+QI +FFT+++G  +ERVYVH+   +
Sbjct: 171 LNPFAKEWNPTLEKAPEEDRCLFLTFSNGYPLTEYQITNFFTQKYGPFVERVYVHWPNPK 230

Query: 78  EGGKEPPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMW 115
            G K  PLFGKVVF AS IP +IL G++E KF ++++ +W
Sbjct: 231 NGKKTSPLFGKVVFRASFIPILILNGQNEVKFWVDAKPLW 270

[Close]

BLAST of CmaCh14G021470 vs. TrEMBL
Match: B9RD30_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609130 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.0e-28
Identity = 63/101 (62.38%), Postives = 76/101 (75.25%), Query Frame = 1


Query: 18  LNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFG-ACIERVYVHY--- 77
           LNP A+EW+P  +   EEDRCLFLTFSNGYPLTE QI+ FF  ++G +C+ERVYVH+   
Sbjct: 162 LNPFAEEWNPTVERVSEEDRCLFLTFSNGYPLTETQILKFFNEKYGPSCVERVYVHWPDP 221

Query: 78  REGGKEPPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMW 115
           R G KEPPLFGKVVF A  IP +IL GK EAKF ++ R +W
Sbjct: 222 RSGRKEPPLFGKVVFKAFYIPVVILNGKKEAKFWVDKRPLW 262

[Close]

BLAST of CmaCh14G021470 vs. TAIR10
Match: AT5G13620.1 (AT5G13620.1 unknown protein)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12
Identity = 32/86 (37.21%), Postives = 53/86 (61.63%), Query Frame = 1


Query: 30  DSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHYREGGKEPPLFGKVVFV 89
           + A E+DR +FLTFS GYPL+E ++  +FTR+FG  IE + +   EG ++      V+  
Sbjct: 195 EQAREDDRTVFLTFSRGYPLSEAEVHAYFTRRFGEIIEAIIMPGGEGNEQALYAKMVLHS 254

Query: 90  ASSIPAIILEGKDEAKFCIESRTMWS 116
           A+ IP I+ +G +  K+ I  + +W+
Sbjct: 255 AAMIPEIVSDGIERNKYTINGKHVWA 280

[Close]

BLAST of CmaCh14G021470 vs. TAIR10
Match: AT1G49290.1 (AT1G49290.1 unknown protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 32/83 (38.55%), Postives = 50/83 (60.24%), Query Frame = 1


Query: 35  EDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHYREGGKEPPLFGKVV--FVASS 94
           +DR +FLTFS GYP++E ++  +FTR+FG  IE V +   E   E PLF K+V     +S
Sbjct: 240 DDRTVFLTFSKGYPISEAEVRVYFTRRFGEVIEAVEMQEVE-ANEQPLFAKMVMKLQCAS 299

Query: 95  IPAIILEGKDEAKFCIESRTMWS 116
           +   I+  +   KF I+ + +W+
Sbjct: 300 MMDEIVSARFRNKFTIDGKHVWA 321

[Close]

BLAST of CmaCh14G021470 vs. TAIR10
Match: AT1G64870.1 (AT1G64870.1 unknown protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09
Identity = 32/104 (30.77%), Postives = 58/104 (55.77%), Query Frame = 1


Query: 25  WSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGA-CIERVYVHYREGG------ 84
           W+  H  A +++R +FLTFS G+P++  +++H FT  +G  C+E VY+   +GG      
Sbjct: 192 WNANH-VATDKERTVFLTFSRGFPVSHAEVIHLFTEIYGEDCVESVYMP-EDGGNSSNDN 251

Query: 85  ------KEPPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMWS 116
                 ++ PLF K+V  +      IL G+++ K+ I  + +W+
Sbjct: 252 TNCNGHQQQPLFAKMVLDSVVTVDRILSGQEKQKYKINGKHIWA 293

[Close]

BLAST of CmaCh14G021470 vs. TAIR10
Match: AT3G45200.1 (AT3G45200.1 unknown protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-08
Identity = 28/95 (29.47%), Postives = 51/95 (53.68%), Query Frame = 1


Query: 32  APEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGA-CIERVYVHY----------REGGKEP 91
           A E DR LFLTFS GYP+T  +I+  FT+++G  C+E VY+ +              ++ 
Sbjct: 199 ATENDRTLFLTFSRGYPVTHAEIIELFTKEYGENCVEGVYMQHDNKRSFNANANRSCEQQ 258

Query: 92  PLFGKVVFVASSIPAIILEGKDEAKFCIESRTMWS 116
            LF ++V  + +    +L+ + + +  I  + +W+
Sbjct: 259 SLFARLVLDSVTTVDRVLDDEQKKELMIYGKNIWA 293

[Close]

BLAST of CmaCh14G021470 vs. TAIR10
Match: AT5G11220.1 (AT5G11220.1 unknown protein)

HSP 1 Score: 54.3 bits (129), Expect = 1.0e-07
Identity = 26/95 (27.37%), Postives = 53/95 (55.79%), Query Frame = 1


Query: 32  APEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGA-CIERVYV----------HYREGGKEP 91
           A + +R +F+TFS G+P+++ ++  FFT+ +G  C+E VY+          +  + G++ 
Sbjct: 162 ATDNERTMFITFSRGFPVSQAEVKRFFTKNYGENCVEGVYMKEDNKNFLNANGNDNGQQQ 221

Query: 92  PLFGKVVFVASSIPAIILEGKDEAKFCIESRTMWS 116
            LF K+V  + +    IL+G+   +F    + +W+
Sbjct: 222 SLFAKLVLNSVATVDRILDGEKIKRFKSNGKHIWA 256

[Close]

BLAST of CmaCh14G021470 vs. NCBI nr
Match: gi|700201235|gb|KGN56368.1| (hypothetical protein Csa_3G118030 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 2.5e-35
Identity = 75/100 (75.00%), Postives = 85/100 (85.00%), Query Frame = 1


Query: 15  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHYR 74
           G DLNPNAKEW+PI+D APEEDRCLFLTFSNG+PLTE+QIV FFT        RVYVHY 
Sbjct: 9   GADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT--------RVYVHYP 68

Query: 75  EGGKEPPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMW 115
           EGGK+ PLFGKVVFVASSIPAI+L GK+EAKF I+++TMW
Sbjct: 69  EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMW 100

[Close]

BLAST of CmaCh14G021470 vs. NCBI nr
Match: gi|566202713|ref|XP_006375225.1| (hypothetical protein POPTR_0014s05440g [Populus trichocarpa])

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 65/107 (60.75%), Postives = 81/107 (75.70%), Query Frame = 1


Query: 15  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHYR 74
           G  LNP+AKEW+P+ + A EE+RCLFLTFSNGYPLTE QI  FFT  +G+C+ERVYVH+ 
Sbjct: 168 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 227

Query: 75  EGGKE--PPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMWSYSIN 120
           E   +  PPLFGKVVF AS IPA+IL GK EAKF ++++ +W    N
Sbjct: 228 EPKDQGAPPLFGKVVFTASYIPAMILNGKTEAKFWVDAKPLWGKRFN 274

[Close]

BLAST of CmaCh14G021470 vs. NCBI nr
Match: gi|743935671|ref|XP_011012208.1| (PREDICTED: uncharacterized protein LOC105116509 [Populus euphratica])

HSP 1 Score: 139.8 bits (351), Expect = 5.3e-30
Identity = 63/102 (61.76%), Postives = 80/102 (78.43%), Query Frame = 1


Query: 15  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHYR 74
           G  LNP+AKEW+P+ + A EE+RCLFLTFSNGYPLTE QI  FFT  +G+C+ERVYVH+ 
Sbjct: 169 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 228

Query: 75  EGGKE--PPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMW 115
           E   +  PPLFGKVVF AS +PA+IL GK EAKF ++++ +W
Sbjct: 229 EPKDQGAPPLFGKVVFTASYVPAMILNGKIEAKFWVDAKPLW 270

[Close]

BLAST of CmaCh14G021470 vs. NCBI nr
Match: gi|743791790|ref|XP_011042422.1| (PREDICTED: uncharacterized protein LOC105138112 [Populus euphratica])

HSP 1 Score: 139.8 bits (351), Expect = 5.3e-30
Identity = 63/102 (61.76%), Postives = 80/102 (78.43%), Query Frame = 1


Query: 15  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHYR 74
           G  LNP+AKEW+P+ + A EE+RCLFLTFSNGYPLTE QI  FFT  +G+C+ERVYVH+ 
Sbjct: 169 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 228

Query: 75  EGGKE--PPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMW 115
           E   +  PPLFGKVVF AS +PA+IL GK EAKF ++++ +W
Sbjct: 229 EPKDQGAPPLFGKVVFTASYVPAMILNGKIEAKFWVDAKPLW 270

[Close]

BLAST of CmaCh14G021470 vs. NCBI nr
Match: gi|567905778|ref|XP_006445377.1| (hypothetical protein CICLE_v10024012mg [Citrus clementina])

HSP 1 Score: 137.9 bits (346), Expect = 2.0e-29
Identity = 63/99 (63.64%), Postives = 75/99 (75.76%), Query Frame = 1


Query: 18  LNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRQFGACIERVYVHYRE-- 77
           LNP AKEW+P  + APEEDRCLFLTFSNGYPL E+QIV FFT +FG C+E+VYVH  E  
Sbjct: 46  LNPCAKEWNPFKERAPEEDRCLFLTFSNGYPLAENQIVTFFTNKFGPCVEKVYVHSPEPT 105

Query: 78  GGKEPPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMW 115
              EPPLFGKVVF AS IPA+IL G  + KF ++ + +W
Sbjct: 106 SVSEPPLFGKVVFTASYIPAVILCGAKQTKFMVDGKPLW 144

The following BLAST results are available for this feature:

BLAST of CmaCh14G021470 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh14G021470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3N4_CUCSA	1.7e-35	75.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118030 PE=4 SV=1	[more]
B9MV19_POPTR	7.5e-31	60.75	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05440g PE=4 SV=1	[more]
V4TYD6_9ROSI	1.4e-29	63.64	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024012mg PE=4 SV=1	[more]
A0A067K989_JATCU	5.4e-29	61.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14611 PE=4 SV=1	[more]
B9RD30_RICCO	2.0e-28	62.38	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609130 PE=4 SV=1	[more]

BLAST of CmaCh14G021470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13620.1	1.8e-12	37.21	unknown protein	[more]
AT1G49290.1	1.4e-09	38.55	unknown protein	[more]
AT1G64870.1	1.9e-09	30.77	unknown protein	[more]
AT3G45200.1	1.6e-08	29.47	unknown protein	[more]
AT5G11220.1	1.0e-07	27.37	unknown protein	[more]

BLAST of CmaCh14G021470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700201235\|gb\|KGN56368.1\|	2.5e-35	75.00	hypothetical protein Csa_3G118030 [Cucumis sativus]	[more]
gi\|566202713\|ref\|XP_006375225.1\|	1.1e-30	60.75	hypothetical protein POPTR_0014s05440g [Populus trichocarpa]	[more]
gi\|743935671\|ref\|XP_011012208.1\|	5.3e-30	61.76	PREDICTED: uncharacterized protein LOC105116509 [Populus euphratica]	[more]
gi\|743791790\|ref\|XP_011042422.1\|	5.3e-30	61.76	PREDICTED: uncharacterized protein LOC105138112 [Populus euphratica]	[more]
gi\|567905778\|ref\|XP_006445377.1\|	2.0e-29	63.64	hypothetical protein CICLE_v10024012mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G021470.1	CmaCh14G021470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33527	FAMILY NOT NAMED	coord: 15..114 score: 3.9
None	No IPR available	PANTHER	PTHR33527:SF6	SUBFAMILY NOT NAMED	coord: 15..114 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G021470	Cla021102	Watermelon (97103) v1	cmawmB242
CmaCh14G021470	Csa3G118030	Cucumber (Chinese Long) v2	cmacuB253
CmaCh14G021470	MELO3C005973	Melon (DHL92) v3.5.1	cmameB242
CmaCh14G021470	ClCG05G000350	Watermelon (Charleston Gray)	cmawcgB233
CmaCh14G021470	CSPI03G07390	Wild cucumber (PI 183967)	cmacpiB255
CmaCh14G021470	CmoCh14G022150	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G021470	CmoCh06G009960	Cucurbita moschata (Rifu)	cmacmoB271
CmaCh14G021470	Lsi05G021880	Bottle gourd (USVL1VR-Ls)	cmalsiB245
CmaCh14G021470	Cp4.1LG03g15680	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G021470	Cp4.1LG08g00550	Cucurbita pepo (Zucchini)	cmacpeB292
CmaCh14G021470	MELO3C005973.2	Melon (DHL92) v3.6.1	cmamedB273
CmaCh14G021470	CsaV3_3G007510	Cucumber (Chinese Long) v3	cmacucB0291
CmaCh14G021470	Cla97C05G080320	Watermelon (97103) v2	cmawmbB263
CmaCh14G021470	Bhi01G000420	Wax gourd	cmawgoB0315
CmaCh14G021470	CsGy3G007510	Cucumber (Gy14) v2	cgybcmaB318
CmaCh14G021470	Carg17670	Silver-seed gourd	carcmaB0173
CmaCh14G021470	Carg24162	Silver-seed gourd	carcmaB0127

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh14G021470	CmaCh06G009740	Cucurbita maxima (Rimu)	cmacmaB287

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G021470	Cucurbita pepo (Zucchini)	cmacpeB291
CmaCh14G021470	Cucumber (Chinese Long) v3	cmacucB0305
CmaCh14G021470	Watermelon (97103) v2	cmawmbB247
CmaCh14G021470	Wax gourd	cmawgoB0308
CmaCh14G021470	Cucurbita maxima (Rimu)	cmacmaB263
CmaCh14G021470	Cucumber (Gy14) v1	cgycmaB0709
CmaCh14G021470	Cucurbita moschata (Rifu)	cmacmoB260