Cla97C05G080320 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G080320
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Rho guanine nucleotide exchange factor 7, putative
Location	Cla97Chr05 : 473680 .. 474270 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCACTGTTGAGGGCTTTAATGGTGCTGATTTGAACCCTAATGCAAAAGAATGGAACCCTGTTTACGATTGCGCTCCGGAGGAAGATCGATGCCTCTTTCTCACCTTCTCGAATGGTTTCCCCCTTAACGAGCACCAAATCGTCACCTTCTTCACCCGGTACGCCCACCTTTGTTCCCAATTTTCTTTCTTTCATTCAACAGTAAAAAAACGAAGACATGAATTCAAAGTTGATAATACAAGTTGAAAACAAGATAGTATAATTTCAACACAGATCTAAGTTATATATATATGTTTATGCATGCATCATATGTGTAATAGATGTTGTTATAGATCTTTCTTCACTTTTAACTGATGTAGAAAATACGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGACGGAGGGAAACAACCGCCATTGTTTGGAAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAGTCATTCTGGAAGGGAAAGAAGAAGCTAAGTTTTTTATTGATAGCAAGACGATGTGGTGTAAGAAATTTGAGGCTCGAAAAGCTCGGACTAGGGCTTCGGCCCCAGCGTCTCAACGACGGTGA

mRNA sequence

ATGGGCACTGTTGAGGGCTTTAATGGTGCTGATTTGAACCCTAATGCAAAAGAATGGAACCCTGTTTACGATTGCGCTCCGGAGGAAGATCGATGCCTCTTTCTCACCTTCTCGAATGGTTTCCCCCTTAACGAGCACCAAATCGTCACCTTCTTCACCCGAAAATACGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGACGGAGGGAAACAACCGCCATTGTTTGGAAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAGTCATTCTGGAAGGGAAAGAAGAAGCTAAGTTTTTTATTGATAGCAAGACGATGTGGTGTAAGAAATTTGAGGCTCGAAAAGCTCGGACTAGGGCTTCGGCCCCAGCGTCTCAACGACGGTGA

Coding sequence (CDS)

ATGGGCACTGTTGAGGGCTTTAATGGTGCTGATTTGAACCCTAATGCAAAAGAATGGAACCCTGTTTACGATTGCGCTCCGGAGGAAGATCGATGCCTCTTTCTCACCTTCTCGAATGGTTTCCCCCTTAACGAGCACCAAATCGTCACCTTCTTCACCCGAAAATACGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGACGGAGGGAAACAACCGCCATTGTTTGGAAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAGTCATTCTGGAAGGGAAAGAAGAAGCTAAGTTTTTTATTGATAGCAAGACGATGTGGTGTAAGAAATTTGAGGCTCGAAAAGCTCGGACTAGGGCTTCGGCCCCAGCGTCTCAACGACGGTGA

Protein sequence

MGTVEGFNGADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTRASAPASQRR

Homology

[Close]

BLAST of Cla97C05G080320 vs. NCBI nr
Match: KGN56368.1 (hypothetical protein Csa_3G118030 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 9.9e-55
Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = 0


Query: 1   MGTVEGFNGADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACI 60
           MGTVE FNGADLNPNAKEWNP+YDCAPEEDRCLFLTFSNGFPL E+QIVTFFT       
Sbjct: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT------- 60

Query: 61  ERVYVHYPDGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTR 120
            RVYVHYP+GGKQ PLFGKVVFVASSIPA++L GKEEAKF ID+KTMWCKKFE+RKAR+R
Sbjct: 61  -RVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR 120

Query: 121 ASAPASQRR 130
           ASAPAS+RR
Sbjct: 121 ASAPASRRR 121

[Close]

BLAST of Cla97C05G080320 vs. NCBI nr
Match: XP_023540960.1 (uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.8 bits (538), Expect = 1.3e-51
Identity = 97/121 (80.17%), Postives = 110/121 (90.91%), Query Frame = 0


Query: 1   MGTVEGFNGAD-LNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGAC 60
           M +++GFNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+EHQIV FFTRKYG+C
Sbjct: 1   MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRKYGSC 60

Query: 61  IERVYVHYPDGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKART 120
           IERVYVHYPDGG Q PLFGKVVFVASSIPA+IL GK+EAKF I+SKT+WCK++EARK R 
Sbjct: 61  IERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRF 120

[Close]

BLAST of Cla97C05G080320 vs. NCBI nr
Match: XP_022944781.1 (uncharacterized protein LOC111449194 [Cucurbita moschata])

HSP 1 Score: 209.9 bits (533), Expect = 5.1e-51
Identity = 96/121 (79.34%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MGTVEGFNGAD-LNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGAC 60
           M +++GFNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+EHQIV FFTR YG+C
Sbjct: 1   MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRNYGSC 60

Query: 61  IERVYVHYPDGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKART 120
           IERVYVHYPDGG Q PLFGKVVFVASSIPA+IL GK+EAKF I+SKT+WCK++EARK R 
Sbjct: 61  IERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRF 120

[Close]

BLAST of Cla97C05G080320 vs. NCBI nr
Match: XP_022924654.1 (uncharacterized protein LOC111432088 [Cucurbita moschata])

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-50
Identity = 95/119 (79.83%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 2   GTVEGFNGADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIE 61
           GT  G  G DLNPNAKEW+P++D APEEDRCLFLTFSNG+PL EHQIV FFTRK+GACIE
Sbjct: 10  GTTNG--GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIE 69

Query: 62  RVYVHYPDGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTR 121
           RVYVHY +GGK+PPLFGKVVFVASSIPA+ILEGK+EAKF I+S+TMWCK++EARKAR R
Sbjct: 70  RVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMWCKRYEARKARYR 126

[Close]

BLAST of Cla97C05G080320 vs. NCBI nr
Match: XP_023528303.1 (uncharacterized protein LOC111791264 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-50
Identity = 95/119 (79.83%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 2   GTVEGFNGADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIE 61
           GT  G  G DLNPNAKEW+P++D APEEDRCLFLTFSNG+PL EHQIV FFTRK+GACIE
Sbjct: 10  GTTNG--GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIE 69

Query: 62  RVYVHYPDGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTR 121
           RVYVHY +GGK+PPLFGKVVFVASSIPA+ILEGK+EAKF I+S+TMWCK++EARKAR R
Sbjct: 70  RVYVHYREGGKEPPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMWCKRYEARKARYR 126

[Close]

BLAST of Cla97C05G080320 vs. TrEMBL
Match: tr|A0A0A0L3N4|A0A0A0L3N4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118030 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 6.5e-55
Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = 0


Query: 1   MGTVEGFNGADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACI 60
           MGTVE FNGADLNPNAKEWNP+YDCAPEEDRCLFLTFSNGFPL E+QIVTFFT       
Sbjct: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT------- 60

Query: 61  ERVYVHYPDGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTR 120
            RVYVHYP+GGKQ PLFGKVVFVASSIPA++L GKEEAKF ID+KTMWCKKFE+RKAR+R
Sbjct: 61  -RVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR 120

Query: 121 ASAPASQRR 130
           ASAPAS+RR
Sbjct: 121 ASAPASRRR 121

[Close]

BLAST of Cla97C05G080320 vs. TrEMBL
Match: tr|V4TYD6|V4TYD6_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10024012mg PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-35
Identity = 72/107 (67.29%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 12  LNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYPD-- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PL E+QIVTFFT K+G C+E+VYVH P+  
Sbjct: 46  LNPCAKEWNPFKERAPEEDRCLFLTFSNGYPLAENQIVTFFTNKFGPCVEKVYVHSPEPT 105

Query: 72  GGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
              +PPLFGKVVF AS IPAVIL G ++ KF +D K +WCKKFE +K
Sbjct: 106 SVSEPPLFGKVVFTASYIPAVILCGAKQTKFMVDGKPLWCKKFEPKK 152

[Close]

BLAST of Cla97C05G080320 vs. TrEMBL
Match: tr|A0A2K1XQX1|A0A2K1XQX1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G054900v3 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.2e-34
Identity = 71/110 (64.55%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 9   GADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYP 68
           G+ LNP+AKEWNPV + A EE+RCLFLTFSNG+PL E QI  FFT  YG+C+ERVYVH+P
Sbjct: 168 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 227

Query: 69  DGGKQ--PPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
           +   Q  PPLFGKVVF AS IPA+IL GK EAKF++D+K +W K+F  +K
Sbjct: 228 EPKDQGAPPLFGKVVFTASYIPAMILNGKTEAKFWVDAKPLWGKRFNPKK 277

[Close]

BLAST of Cla97C05G080320 vs. TrEMBL
Match: tr|A0A067K989|A0A067K989_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14611 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.7e-34
Identity = 71/114 (62.28%), Postives = 86/114 (75.44%), Query Frame = 0


Query: 12  LNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYP--- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PL E+QI  FFT+KYG  +ERVYVH+P   
Sbjct: 171 LNPFAKEWNPTLEKAPEEDRCLFLTFSNGYPLTEYQITNFFTQKYGPFVERVYVHWPNPK 230

Query: 72  DGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTRAS 123
           +G K  PLFGKVVF AS IP +IL G+ E KF++D+K +WCK+F+  K   R S
Sbjct: 231 NGKKTSPLFGKVVFRASFIPILILNGQNEVKFWVDAKPLWCKRFDPEKKNRRNS 284

[Close]

BLAST of Cla97C05G080320 vs. TrEMBL
Match: tr|B9RD30|B9RD30_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1609130 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.9e-33
Identity = 69/109 (63.30%), Postives = 85/109 (77.98%), Query Frame = 0


Query: 12  LNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYG-ACIERVYVHYPD- 71
           LNP A+EWNP  +   EEDRCLFLTFSNG+PL E QI+ FF  KYG +C+ERVYVH+PD 
Sbjct: 162 LNPFAEEWNPTVERVSEEDRCLFLTFSNGYPLTETQILKFFNEKYGPSCVERVYVHWPDP 221

Query: 72  --GGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
             G K+PPLFGKVVF A  IP VIL GK+EAKF++D + +WCK+F+ +K
Sbjct: 222 RSGRKEPPLFGKVVFKAFYIPVVILNGKKEAKFWVDKRPLWCKRFDPKK 270

[Close]

BLAST of Cla97C05G080320 vs. TAIR10
Match: AT5G13620.1 (unknown protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 35/100 (35.00%), Postives = 60/100 (60.00%), Query Frame = 0


Query: 26  APEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVAS 85
           A E+DR +FLTFS G+PL+E ++  +FTR++G  IE + +   +G +Q      V+  A+
Sbjct: 197 AREDDRTVFLTFSRGYPLSEAEVHAYFTRRFGEIIEAIIMPGGEGNEQALYAKMVLHSAA 256

Query: 86  SIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTRASAPA 126
            IP ++ +G E  K+ I+ K +W +K+  R +     AP+
Sbjct: 257 MIPEIVSDGIERNKYTINGKHVWARKYIPRSSINNNLAPS 296

[Close]

BLAST of Cla97C05G080320 vs. TAIR10
Match: AT1G64870.1 (unknown protein)

HSP 1 Score: 68.6 bits (166), Expect = 3.3e-12
Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 19  WNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGA-CIERVYVHYPDGG------ 78
           WN  +  A +++R +FLTFS GFP++  +++  FT  YG  C+E VY+   DGG      
Sbjct: 192 WNANH-VATDKERTVFLTFSRGFPVSHAEVIHLFTEIYGEDCVESVYMP-EDGGNSSNDN 251

Query: 79  ------KQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
                 +Q PLF K+V  +      IL G+E+ K+ I+ K +W +KF+  K
Sbjct: 252 TNCNGHQQQPLFAKMVLDSVVTVDRILSGQEKQKYKINGKHIWARKFKNNK 300

[Close]

BLAST of Cla97C05G080320 vs. TAIR10
Match: AT1G49290.1 (unknown protein)

HSP 1 Score: 65.1 bits (157), Expect = 3.7e-11
Identity = 32/86 (37.21%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 29  EDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVV--FVASS 88
           +DR +FLTFS G+P++E ++  +FTR++G  IE V +   +  +Q PLF K+V     +S
Sbjct: 240 DDRTVFLTFSKGYPISEAEVRVYFTRRFGEVIEAVEMQEVEANEQ-PLFAKMVMKLQCAS 299

Query: 89  IPAVILEGKEEAKFFIDSKTMWCKKF 113
           +   I+  +   KF ID K +W +K+
Sbjct: 300 MMDEIVSARFRNKFTIDGKHVWARKY 324

[Close]

BLAST of Cla97C05G080320 vs. TAIR10
Match: AT5G11220.1 (unknown protein)

HSP 1 Score: 63.9 bits (154), Expect = 8.2e-11
Identity = 32/98 (32.65%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 26  APEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGA-CIERVYV----------HYPDGGKQP 85
           A + +R +F+TFS GFP+++ ++  FFT+ YG  C+E VY+          +  D G+Q 
Sbjct: 162 ATDNERTMFITFSRGFPVSQAEVKRFFTKNYGENCVEGVYMKEDNKNFLNANGNDNGQQQ 221

Query: 86  PLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKF 113
            LF K+V  + +    IL+G++  +F  + K +W +K+
Sbjct: 222 SLFAKLVLNSVATVDRILDGEKIKRFKSNGKHIWARKY 259

[Close]

BLAST of Cla97C05G080320 vs. TAIR10
Match: AT3G45200.1 (unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10
Identity = 34/110 (30.91%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 19  WNPVYDC-APEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGA-CIERVYVHYPD------- 78
           WN   +C A E DR LFLTFS G+P+   +I+  FT++YG  C+E VY+ + +       
Sbjct: 193 WNA--NCIATENDRTLFLTFSRGYPVTHAEIIELFTKEYGENCVEGVYMQHDNKRSFNAN 252

Query: 79  ---GGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
                +Q  LF ++V  + +    +L+ +++ +  I  K +W +K++ R+
Sbjct: 253 ANRSCEQQSLFARLVLDSVTTVDRVLDDEQKKELMIYGKNIWARKYDKRE 300

The following BLAST results are available for this feature:

BLAST of Cla97C05G080320 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56368.1	9.9e-55	82.95	hypothetical protein Csa_3G118030 [Cucumis sativus]	[more]
XP_023540960.1	1.3e-51	80.17	uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo]	[more]
XP_022944781.1	5.1e-51	79.34	uncharacterized protein LOC111449194 [Cucurbita moschata]	[more]
XP_022924654.1	1.9e-50	79.83	uncharacterized protein LOC111432088 [Cucurbita moschata]	[more]
XP_023528303.1	1.9e-50	79.83	uncharacterized protein LOC111791264 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cla97C05G080320 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3N4\|A0A0A0L3N4_CUCSA	6.5e-55	82.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118030 PE=4 SV=1	[more]
tr\|V4TYD6\|V4TYD6_9ROSI	2.6e-35	67.29	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10024012mg PE=4 ...	[more]
tr\|A0A2K1XQX1\|A0A2K1XQX1_POPTR	2.2e-34	64.55	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G054900v3 PE=...	[more]
tr\|A0A067K989\|A0A067K989_JATCU	3.7e-34	62.28	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14611 PE=4 SV=1	[more]
tr\|B9RD30\|B9RD30_RICCO	1.9e-33	63.30	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1609130 PE=4 SV=1	[more]

BLAST of Cla97C05G080320 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C05G080320 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13620.1	1.3e-13	35.00	unknown protein	[more]
AT1G64870.1	3.3e-12	36.04	unknown protein	[more]
AT1G49290.1	3.7e-11	37.21	unknown protein	[more]
AT5G11220.1	8.2e-11	32.65	unknown protein	[more]
AT3G45200.1	1.8e-10	30.91	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G080320.1	Cla97C05G080320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33527	FAMILY NOT NAMED	coord: 7..117
None	No IPR available	PANTHER	PTHR33527:SF8	SUBFAMILY NOT NAMED	coord: 7..117

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G080320	Cla021102	Watermelon (97103) v1	wmwmbB206
Cla97C05G080320	Csa3G118030	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G080320	MELO3C005973	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G080320	ClCG05G000350	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G080320	CSPI03G07390	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G080320	CmaCh06G009740	Cucurbita maxima (Rimu)	cmawmbB857
Cla97C05G080320	CmaCh14G021470	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G080320	CmoCh14G022150	Cucurbita moschata (Rifu)	cmowmbB243
Cla97C05G080320	CmoCh06G009960	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G080320	Lsi05G021880	Bottle gourd (USVL1VR-Ls)	lsiwmbB333
Cla97C05G080320	CsGy3G007510	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G080320	MELO3C005973.2	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G080320	Carg17670	Silver-seed gourd	carwmbB0138
Cla97C05G080320	Carg24162	Silver-seed gourd	carwmbB0098
Cla97C05G080320	CsaV3_3G007510	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G080320	Bhi01G000420	Wax gourd	wgowmbB191

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G080320	Silver-seed gourd	carwmbB1047
Cla97C05G080320	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G080320	Cucurbita maxima (Rimu)	cmawmbB007