CsaV3_3G007510 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G007510
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Rho guanine nucleotide exchange factor
Location	chr3 : 6665384 .. 6666012 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCACAGTTGAGGTCTTTAATGGTGCTGATTTAAATCCTAATGCAAAAGAATGGAACCCTATTTACGATTGCGCTCCGGAGGAAGACCGATGCCTCTTTCTCACCTTCTCAAATGGCTTCCCCCTCACAGAGAACCAAATCGTCACCTTCTTCACCCGGTACGTGTACGTCTACCTATCTTTCTTTTTACTAACAATATACGTTAAATCAAGCAAATAGTATATGTATGAGGTTTATGCAGGTTAAGAACCAGACCATGTTTTAAGTGGTATATATATATAAATATATAATACACACACACACATAAATATATATATATATATATATATATATGTTGTTTTAGGTTCGCTCTCGATTTGTTAATGTTATAGAACTTATCCAATTTTAAGTAATGTAGAAAATTCGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGAGGGAGGGAAACAACTGCCATTGTTTGGGAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAATCGTTCTTGGAGGAAAAGAAGAAGCTAAGTTTTCTATTGATACCAAGACGATGTGGTGTAAGAAATTCGAGTCTCGAAAAGCTCGGTCTAGGGCTTCAGCCCCAGCTTCTCGACGACGATAA

mRNA sequence

ATGGGCACAGTTGAGGTCTTTAATGGTGCTGATTTAAATCCTAATGCAAAAGAATGGAACCCTATTTACGATTGCGCTCCGGAGGAAGACCGATGCCTCTTTCTCACCTTCTCAAATGGCTTCCCCCTCACAGAGAACCAAATCGTCACCTTCTTCACCCGAAAATTCGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGAGGGAGGGAAACAACTGCCATTGTTTGGGAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAATCGTTCTTGGAGGAAAAGAAGAAGCTAAGTTTTCTATTGATACCAAGACGATGTGGTGTAAGAAATTCGAGTCTCGAAAAGCTCGGTCTAGGGCTTCAGCCCCAGCTTCTCGACGACGATAA

Coding sequence (CDS)

ATGGGCACAGTTGAGGTCTTTAATGGTGCTGATTTAAATCCTAATGCAAAAGAATGGAACCCTATTTACGATTGCGCTCCGGAGGAAGACCGATGCCTCTTTCTCACCTTCTCAAATGGCTTCCCCCTCACAGAGAACCAAATCGTCACCTTCTTCACCCGAAAATTCGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGAGGGAGGGAAACAACTGCCATTGTTTGGGAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAATCGTTCTTGGAGGAAAAGAAGAAGCTAAGTTTTCTATTGATACCAAGACGATGTGGTGTAAGAAATTCGAGTCTCGAAAAGCTCGGTCTAGGGCTTCAGCCCCAGCTTCTCGACGACGATAA

Protein sequence

MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGACIERVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRASAPASRRR

Homology

[Close]

BLAST of CsaV3_3G007510 vs. NCBI nr
Match: KGN56368.1 (hypothetical protein Csa_3G118030 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 1.4e-61
Identity = 121/129 (93.80%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGACI 60
           MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT       
Sbjct: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT------- 60

Query: 61  ERVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR 120
            RVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR
Sbjct: 61  -RVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR 120

Query: 121 ASAPASRRR 130
           ASAPASRRR
Sbjct: 121 ASAPASRRR 121

[Close]

BLAST of CsaV3_3G007510 vs. NCBI nr
Match: XP_023540960.1 (uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.5 bits (532), Expect = 6.7e-51
Identity = 94/121 (77.69%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 1   MGTVEVFNGAD-LNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGAC 60
           M +++ FNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+E+QIV FFTRK+G+C
Sbjct: 1   MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRKYGSC 60

Query: 61  IERVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARS 120
           IERVYVHYP+GG QLPLFGKVVFVASSIPAI+LGGK+EAKFSI++KT+WCK++E+RK R 
Sbjct: 61  IERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRF 120

[Close]

BLAST of CsaV3_3G007510 vs. NCBI nr
Match: XP_022944781.1 (uncharacterized protein LOC111449194 [Cucurbita moschata])

HSP 1 Score: 207.6 bits (527), Expect = 2.5e-50
Identity = 93/121 (76.86%), Postives = 111/121 (91.74%), Query Frame = 0


Query: 1   MGTVEVFNGAD-LNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGAC 60
           M +++ FNGAD LNP AKEWNP++DCAPEEDRCLFLTFSNG PL+E+QIV FFTR +G+C
Sbjct: 1   MDSLQGFNGADHLNPQAKEWNPLFDCAPEEDRCLFLTFSNGNPLSEHQIVNFFTRNYGSC 60

Query: 61  IERVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARS 120
           IERVYVHYP+GG QLPLFGKVVFVASSIPAI+LGGK+EAKFSI++KT+WCK++E+RK R 
Sbjct: 61  IERVYVHYPDGGTQLPLFGKVVFVASSIPAIILGGKDEAKFSIESKTLWCKRYEARKTRF 120

[Close]

BLAST of CsaV3_3G007510 vs. NCBI nr
Match: XP_022924654.1 (uncharacterized protein LOC111432088 [Cucurbita moschata])

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 92/112 (82.14%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 9   GADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGACIERVYVHYP 68
           G DLNPNAKEW+PI+D APEEDRCLFLTFSNG+PLTE+QIV FFTRKFGACIERVYVHY 
Sbjct: 15  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYR 74

Query: 69  EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR 121
           EGGK+ PLFGKVVFVASSIPAI+L GK+EAKFSI+++TMWCK++E+RKAR R
Sbjct: 75  EGGKEPPLFGKVVFVASSIPAIILEGKDEAKFSIESRTMWCKRYEARKARYR 126

[Close]

BLAST of CsaV3_3G007510 vs. NCBI nr
Match: XP_023528303.1 (uncharacterized protein LOC111791264 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.9 bits (507), Expect = 5.3e-48
Identity = 91/112 (81.25%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 9   GADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGACIERVYVHYP 68
           G DLNPNAKEW+PI+D APEEDRCLFLTFSNG+PLTE+QIV FFTRKFGACIERVYVHY 
Sbjct: 15  GGDLNPNAKEWSPIHDSAPEEDRCLFLTFSNGYPLTEHQIVHFFTRKFGACIERVYVHYR 74

Query: 69  EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR 121
           EGGK+ PLFGKVVFVASSIPAI+L GK+EAKF I+++TMWCK++E+RKAR R
Sbjct: 75  EGGKEPPLFGKVVFVASSIPAIILEGKDEAKFCIESRTMWCKRYEARKARYR 126

[Close]

BLAST of CsaV3_3G007510 vs. TAIR10
Match: AT5G13620.1 (unknown protein)

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-14
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 0


Query: 26  APEEDRCLFLTFSNGFPLTENQIVTFFTRKFGACIERVYVHYPEGGKQLPLFGKVVFVAS 85
           A E+DR +FLTFS G+PL+E ++  +FTR+FG  IE + +   EG +Q      V+  A+
Sbjct: 197 AREDDRTVFLTFSRGYPLSEAEVHAYFTRRFGEIIEAIIMPGGEGNEQALYAKMVLHSAA 256

Query: 86  SIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRASAPA 126
            IP IV  G E  K++I+ K +W +K+  R + +   AP+
Sbjct: 257 MIPEIVSDGIERNKYTINGKHVWARKYIPRSSINNNLAPS 296

[Close]

BLAST of CsaV3_3G007510 vs. TAIR10
Match: AT1G64870.1 (unknown protein)

HSP 1 Score: 67.8 bits (164), Expect = 5.7e-12
Identity = 38/112 (33.93%), Postives = 63/112 (56.25%), Query Frame = 0


Query: 19  WNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGA-CIERVYVHYPEGG------ 78
           WN  +  A +++R +FLTFS GFP++  +++  FT  +G  C+E VY+  PE G      
Sbjct: 192 WNANH-VATDKERTVFLTFSRGFPVSHAEVIHLFTEIYGEDCVESVYM--PEDGGNSSND 251

Query: 79  -------KQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRK 117
                  +Q PLF K+V  +      +L G+E+ K+ I+ K +W +KF++ K
Sbjct: 252 NTNCNGHQQQPLFAKMVLDSVVTVDRILSGQEKQKYKINGKHIWARKFKNNK 300

[Close]

BLAST of CsaV3_3G007510 vs. TAIR10
Match: AT1G49290.1 (unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 9.7e-12
Identity = 33/86 (38.37%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 29  EDRCLFLTFSNGFPLTENQIVTFFTRKFGACIERVYVHYPEGGKQLPLFGKVV--FVASS 88
           +DR +FLTFS G+P++E ++  +FTR+FG  IE V +   E  +Q PLF K+V     +S
Sbjct: 240 DDRTVFLTFSKGYPISEAEVRVYFTRRFGEVIEAVEMQEVEANEQ-PLFAKMVMKLQCAS 299

Query: 89  IPAIVLGGKEEAKFSIDTKTMWCKKF 113
           +   ++  +   KF+ID K +W +K+
Sbjct: 300 MMDEIVSARFRNKFTIDGKHVWARKY 324

[Close]

BLAST of CsaV3_3G007510 vs. TAIR10
Match: AT3G45200.1 (unknown protein)

HSP 1 Score: 60.8 bits (146), Expect = 7.0e-10
Identity = 35/110 (31.82%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 19  WNPIYDC-APEEDRCLFLTFSNGFPLTENQIVTFFTRKFGA-CIERVYVHYP-------- 78
           WN   +C A E DR LFLTFS G+P+T  +I+  FT+++G  C+E VY+ +         
Sbjct: 193 WNA--NCIATENDRTLFLTFSRGYPVTHAEIIELFTKEYGENCVEGVYMQHDNKRSFNAN 252

Query: 79  --EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRK 117
                +Q  LF ++V  + +    VL  +++ +  I  K +W +K++ R+
Sbjct: 253 ANRSCEQQSLFARLVLDSVTTVDRVLDDEQKKELMIYGKNIWARKYDKRE 300

[Close]

BLAST of CsaV3_3G007510 vs. TAIR10
Match: AT5G11220.1 (unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-09
Identity = 29/98 (29.59%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 26  APEEDRCLFLTFSNGFPLTENQIVTFFTRKFGA-CIERVYV----------HYPEGGKQL 85
           A + +R +F+TFS GFP+++ ++  FFT+ +G  C+E VY+          +  + G+Q 
Sbjct: 162 ATDNERTMFITFSRGFPVSQAEVKRFFTKNYGENCVEGVYMKEDNKNFLNANGNDNGQQQ 221

Query: 86  PLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKF 113
            LF K+V  + +    +L G++  +F  + K +W +K+
Sbjct: 222 SLFAKLVLNSVATVDRILDGEKIKRFKSNGKHIWARKY 259

[Close]

BLAST of CsaV3_3G007510 vs. TrEMBL
Match: tr|A0A0A0L3N4|A0A0A0L3N4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118030 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 9.5e-62
Identity = 121/129 (93.80%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGACI 60
           MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT       
Sbjct: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT------- 60

Query: 61  ERVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR 120
            RVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR
Sbjct: 61  -RVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR 120

Query: 121 ASAPASRRR 130
           ASAPASRRR
Sbjct: 121 ASAPASRRR 121

[Close]

BLAST of CsaV3_3G007510 vs. TrEMBL
Match: tr|V4TYD6|V4TYD6_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10024012mg PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-35
Identity = 72/110 (65.45%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 12  LNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGACIERVYVHYPE-- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PL ENQIVTFFT KFG C+E+VYVH PE  
Sbjct: 46  LNPCAKEWNPFKERAPEEDRCLFLTFSNGYPLAENQIVTFFTNKFGPCVEKVYVHSPEPT 105

Query: 72  GGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARS 120
              + PLFGKVVF AS IPA++L G ++ KF +D K +WCKKFE +K ++
Sbjct: 106 SVSEPPLFGKVVFTASYIPAVILCGAKQTKFMVDGKPLWCKKFEPKKKQA 155

[Close]

BLAST of CsaV3_3G007510 vs. TrEMBL
Match: tr|A0A2K1XQX1|A0A2K1XQX1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G054900v3 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.2e-33
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 9   GADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGACIERVYVHYP 68
           G+ LNP+AKEWNP+ + A EE+RCLFLTFSNG+PLTE+QI  FFT  +G+C+ERVYVH+P
Sbjct: 168 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 227

Query: 69  EGGKQ--LPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRK 117
           E   Q   PLFGKVVF AS IPA++L GK EAKF +D K +W K+F  +K
Sbjct: 228 EPKDQGAPPLFGKVVFTASYIPAMILNGKTEAKFWVDAKPLWGKRFNPKK 277

[Close]

BLAST of CsaV3_3G007510 vs. TrEMBL
Match: tr|A0A067K989|A0A067K989_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14611 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.1e-33
Identity = 70/114 (61.40%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 12  LNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFGACIERVYVHYP--- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PLTE QI  FFT+K+G  +ERVYVH+P   
Sbjct: 171 LNPFAKEWNPTLEKAPEEDRCLFLTFSNGYPLTEYQITNFFTQKYGPFVERVYVHWPNPK 230

Query: 72  EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRAS 123
            G K  PLFGKVVF AS IP ++L G+ E KF +D K +WCK+F+  K   R S
Sbjct: 231 NGKKTSPLFGKVVFRASFIPILILNGQNEVKFWVDAKPLWCKRFDPEKKNRRNS 284

[Close]

BLAST of CsaV3_3G007510 vs. TrEMBL
Match: tr|B9RD30|B9RD30_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1609130 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-31
Identity = 65/109 (59.63%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 12  LNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRKFG-ACIERVYVHYPE- 71
           LNP A+EWNP  +   EEDRCLFLTFSNG+PLTE QI+ FF  K+G +C+ERVYVH+P+ 
Sbjct: 162 LNPFAEEWNPTVERVSEEDRCLFLTFSNGYPLTETQILKFFNEKYGPSCVERVYVHWPDP 221

Query: 72  --GGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRK 117
             G K+ PLFGKVVF A  IP ++L GK+EAKF +D + +WCK+F+ +K
Sbjct: 222 RSGRKEPPLFGKVVFKAFYIPVVILNGKKEAKFWVDKRPLWCKRFDPKK 270

The following BLAST results are available for this feature:

BLAST of CsaV3_3G007510 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56368.1	1.4e-61	93.80	hypothetical protein Csa_3G118030 [Cucumis sativus]	[more]
XP_023540960.1	6.7e-51	77.69	uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo]	[more]
XP_022944781.1	2.5e-50	76.86	uncharacterized protein LOC111449194 [Cucurbita moschata]	[more]
XP_022924654.1	1.4e-48	82.14	uncharacterized protein LOC111432088 [Cucurbita moschata]	[more]
XP_023528303.1	5.3e-48	81.25	uncharacterized protein LOC111791264 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G007510 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13620.1	1.6e-14	39.00	unknown protein	[more]
AT1G64870.1	5.7e-12	33.93	unknown protein	[more]
AT1G49290.1	9.7e-12	38.37	unknown protein	[more]
AT3G45200.1	7.0e-10	31.82	unknown protein	[more]
AT5G11220.1	2.0e-09	29.59	unknown protein	[more]

BLAST of CsaV3_3G007510 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G007510 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L3N4\|A0A0A0L3N4_CUCSA	9.5e-62	93.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118030 PE=4 SV=1	[more]
tr\|V4TYD6\|V4TYD6_9ROSI	2.6e-35	65.45	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10024012mg PE=4 ...	[more]
tr\|A0A2K1XQX1\|A0A2K1XQX1_POPTR	3.2e-33	62.73	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G054900v3 PE=...	[more]
tr\|A0A067K989\|A0A067K989_JATCU	7.1e-33	61.40	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14611 PE=4 SV=1	[more]
tr\|B9RD30\|B9RD30_RICCO	2.3e-31	59.63	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1609130 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G007510.1	CsaV3_3G007510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33527	FAMILY NOT NAMED	coord: 7..117
None	No IPR available	PANTHER	PTHR33527:SF8	SUBFAMILY NOT NAMED	coord: 7..117

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G007510	CSPI03G07390	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G007510	CmaCh14G021470	Cucurbita maxima (Rimu)	cmacucB0291
CsaV3_3G007510	CmaCh06G009740	Cucurbita maxima (Rimu)	cmacucB0965
CsaV3_3G007510	CmoCh14G022150	Cucurbita moschata (Rifu)	cmocucB0283
CsaV3_3G007510	CmoCh06G009960	Cucurbita moschata (Rifu)	cmocucB0953
CsaV3_3G007510	Cp4.1LG03g15680	Cucurbita pepo (Zucchini)	cpecucB0759
CsaV3_3G007510	Cp4.1LG08g00550	Cucurbita pepo (Zucchini)	cpecucB1058
CsaV3_3G007510	CsGy3G007510	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G007510	Carg24162	Silver-seed gourd	carcucB0114
CsaV3_3G007510	Carg17670	Silver-seed gourd	carcucB0153
CsaV3_3G007510	Cla021102	Watermelon (97103) v1	cucwmB239
CsaV3_3G007510	MELO3C005973	Melon (DHL92) v3.5.1	cucmeB236
CsaV3_3G007510	ClCG05G000350	Watermelon (Charleston Gray)	cucwcgB225
CsaV3_3G007510	Lsi05G021880	Bottle gourd (USVL1VR-Ls)	cuclsiB228
CsaV3_3G007510	MELO3C005973.2	Melon (DHL92) v3.6.1	cucmedB230
CsaV3_3G007510	Cla97C05G080320	Watermelon (97103) v2	cucwmbB206
CsaV3_3G007510	Bhi01G000420	Wax gourd	cucwgoB288

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G007510	Cucumber (Gy14) v1	cgycucB387