ClCG05G000350 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCACTGTTGAGGGCTTTAATGGTGCTGATTTGAACCCTAATGCAAAAGAATGGAACCCTGTTTACGATTGCGCTCCGGAGGAAGATCGATGCCTCTTTCTCACCTTCTCGAATGGTTTCCCCCTTAACGAGCACCAAATCGTCACCTTCTTCACCCGGTACGCCCACCTTTGTTCCCAATTTTCTTTCTTTCATTCAACAGTAAAAAAACGAAGACATGAATTCAAAGTTGATAATACAAGTTGAAAACAAGATAGTATAATTTCAACACAGATCTAAGTTATATATATATGTTTATGCATGCATCATATGTGTAATAGATGTTGTTATAGATCTTTCTTCACTTTTAACTGATGTAGAAAATACGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGACGGAGGGAAACAACCGCCATTGTTTGGAAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAGTCATTCTGGAAGGGAAAGAAGAAGCTAAGTTTTTTATTGATAGCAAGACGATGTGGTGTAAGAAATTTGAGGCTCGAAAAGCTCGGACTAGGGCTTCGGCCCCAGCGTCTCAACGACGGTGA ATGGGCACTGTTGAGGGCTTTAATGGTGCTGATTTGAACCCTAATGCAAAAGAATGGAACCCTGTTTACGATTGCGCTCCGGAGGAAGATCGATGCCTCTTTCTCACCTTCTCGAATGGTTTCCCCCTTAACGAGCACCAAATCGTCACCTTCTTCACCCGAAAATACGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGACGGAGGGAAACAACCGCCATTGTTTGGAAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAGTCATTCTGGAAGGGAAAGAAGAAGCTAAGTTTTTTATTGATAGCAAGACGATGTGGTGTAAGAAATTTGAGGCTCGAAAAGCTCGGACTAGGGCTTCGGCCCCAGCGTCTCAACGACGGTGA ATGGGCACTGTTGAGGGCTTTAATGGTGCTGATTTGAACCCTAATGCAAAAGAATGGAACCCTGTTTACGATTGCGCTCCGGAGGAAGATCGATGCCTCTTTCTCACCTTCTCGAATGGTTTCCCCCTTAACGAGCACCAAATCGTCACCTTCTTCACCCGAAAATACGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGACGGAGGGAAACAACCGCCATTGTTTGGAAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAGTCATTCTGGAAGGGAAAGAAGAAGCTAAGTTTTTTATTGATAGCAAGACGATGTGGTGTAAGAAATTTGAGGCTCGAAAAGCTCGGACTAGGGCTTCGGCCCCAGCGTCTCAACGACGGTGA MGTVEGFNGADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTRASAPASQRR
BLAST of ClCG05G000350 vs. TrEMBL
Match: A0A0A0L3N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118030 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 2.7e-55 Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = 1
BLAST of ClCG05G000350 vs. TrEMBL
Match: V4TYD6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024012mg PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 6.9e-35 Identity = 72/107 (67.29%), Postives = 85/107 (79.44%), Query Frame = 1
BLAST of ClCG05G000350 vs. TrEMBL
Match: A0A067K989_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14611 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 5.9e-34 Identity = 71/114 (62.28%), Postives = 86/114 (75.44%), Query Frame = 1
BLAST of ClCG05G000350 vs. TrEMBL
Match: B9MV19_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05440g PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 5.9e-34 Identity = 71/110 (64.55%), Postives = 87/110 (79.09%), Query Frame = 1
BLAST of ClCG05G000350 vs. TrEMBL
Match: B9RD30_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609130 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 5.0e-33 Identity = 69/109 (63.30%), Postives = 85/109 (77.98%), Query Frame = 1
BLAST of ClCG05G000350 vs. TAIR10
Match: AT5G13620.1 (AT5G13620.1 unknown protein) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13 Identity = 35/100 (35.00%), Postives = 58/100 (58.00%), Query Frame = 1
BLAST of ClCG05G000350 vs. TAIR10
Match: AT1G64870.1 (AT1G64870.1 unknown protein) HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11 Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 1
BLAST of ClCG05G000350 vs. TAIR10
Match: AT1G49290.1 (AT1G49290.1 unknown protein) HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10 Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 1
BLAST of ClCG05G000350 vs. TAIR10
Match: AT5G11220.1 (AT5G11220.1 unknown protein) HSP 1 Score: 61.6 bits (148), Expect = 4.0e-10 Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 1
BLAST of ClCG05G000350 vs. TAIR10
Match: AT3G45200.1 (AT3G45200.1 unknown protein) HSP 1 Score: 61.2 bits (147), Expect = 5.3e-10 Identity = 34/110 (30.91%), Postives = 60/110 (54.55%), Query Frame = 1
BLAST of ClCG05G000350 vs. NCBI nr
Match: gi|700201235|gb|KGN56368.1| (hypothetical protein Csa_3G118030 [Cucumis sativus]) HSP 1 Score: 222.6 bits (566), Expect = 3.9e-55 Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = 1
BLAST of ClCG05G000350 vs. NCBI nr
Match: gi|567905778|ref|XP_006445377.1| (hypothetical protein CICLE_v10024012mg [Citrus clementina]) HSP 1 Score: 154.8 bits (390), Expect = 1.0e-34 Identity = 72/107 (67.29%), Postives = 85/107 (79.44%), Query Frame = 1
BLAST of ClCG05G000350 vs. NCBI nr
Match: gi|802700956|ref|XP_012083856.1| (PREDICTED: uncharacterized protein LOC105643369 [Jatropha curcas]) HSP 1 Score: 151.8 bits (382), Expect = 8.4e-34 Identity = 71/114 (62.28%), Postives = 86/114 (75.44%), Query Frame = 1
BLAST of ClCG05G000350 vs. NCBI nr
Match: gi|566202713|ref|XP_006375225.1| (hypothetical protein POPTR_0014s05440g [Populus trichocarpa]) HSP 1 Score: 151.8 bits (382), Expect = 8.4e-34 Identity = 71/110 (64.55%), Postives = 87/110 (79.09%), Query Frame = 1
BLAST of ClCG05G000350 vs. NCBI nr
Match: gi|743935671|ref|XP_011012208.1| (PREDICTED: uncharacterized protein LOC105116509 [Populus euphratica]) HSP 1 Score: 151.0 bits (380), Expect = 1.4e-33 Identity = 70/110 (63.64%), Postives = 88/110 (80.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|