ClCG05G000350 (gene) Watermelon (Charleston Gray)

NameClCG05G000350
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionGb|AAD43168.1
LocationCG_Chr05 : 513465 .. 514055 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCACTGTTGAGGGCTTTAATGGTGCTGATTTGAACCCTAATGCAAAAGAATGGAACCCTGTTTACGATTGCGCTCCGGAGGAAGATCGATGCCTCTTTCTCACCTTCTCGAATGGTTTCCCCCTTAACGAGCACCAAATCGTCACCTTCTTCACCCGGTACGCCCACCTTTGTTCCCAATTTTCTTTCTTTCATTCAACAGTAAAAAAACGAAGACATGAATTCAAAGTTGATAATACAAGTTGAAAACAAGATAGTATAATTTCAACACAGATCTAAGTTATATATATATGTTTATGCATGCATCATATGTGTAATAGATGTTGTTATAGATCTTTCTTCACTTTTAACTGATGTAGAAAATACGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGACGGAGGGAAACAACCGCCATTGTTTGGAAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAGTCATTCTGGAAGGGAAAGAAGAAGCTAAGTTTTTTATTGATAGCAAGACGATGTGGTGTAAGAAATTTGAGGCTCGAAAAGCTCGGACTAGGGCTTCGGCCCCAGCGTCTCAACGACGGTGA

mRNA sequence

ATGGGCACTGTTGAGGGCTTTAATGGTGCTGATTTGAACCCTAATGCAAAAGAATGGAACCCTGTTTACGATTGCGCTCCGGAGGAAGATCGATGCCTCTTTCTCACCTTCTCGAATGGTTTCCCCCTTAACGAGCACCAAATCGTCACCTTCTTCACCCGAAAATACGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGACGGAGGGAAACAACCGCCATTGTTTGGAAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAGTCATTCTGGAAGGGAAAGAAGAAGCTAAGTTTTTTATTGATAGCAAGACGATGTGGTGTAAGAAATTTGAGGCTCGAAAAGCTCGGACTAGGGCTTCGGCCCCAGCGTCTCAACGACGGTGA

Coding sequence (CDS)

ATGGGCACTGTTGAGGGCTTTAATGGTGCTGATTTGAACCCTAATGCAAAAGAATGGAACCCTGTTTACGATTGCGCTCCGGAGGAAGATCGATGCCTCTTTCTCACCTTCTCGAATGGTTTCCCCCTTAACGAGCACCAAATCGTCACCTTCTTCACCCGAAAATACGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGACGGAGGGAAACAACCGCCATTGTTTGGAAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAGTCATTCTGGAAGGGAAAGAAGAAGCTAAGTTTTTTATTGATAGCAAGACGATGTGGTGTAAGAAATTTGAGGCTCGAAAAGCTCGGACTAGGGCTTCGGCCCCAGCGTCTCAACGACGGTGA

Protein sequence

MGTVEGFNGADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTRASAPASQRR
BLAST of ClCG05G000350 vs. TrEMBL
Match: A0A0A0L3N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118030 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.7e-55
Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = 1

Query: 1   MGTVEGFNGADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACI 60
           MGTVE FNGADLNPNAKEWNP+YDCAPEEDRCLFLTFSNGFPL E+QIVTFFTR      
Sbjct: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTR------ 60

Query: 61  ERVYVHYPDGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTR 120
             VYVHYP+GGKQ PLFGKVVFVASSIPA++L GKEEAKF ID+KTMWCKKFE+RKAR+R
Sbjct: 61  --VYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR 120

Query: 121 ASAPASQRR 130
           ASAPAS+RR
Sbjct: 121 ASAPASRRR 121

BLAST of ClCG05G000350 vs. TrEMBL
Match: V4TYD6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024012mg PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 6.9e-35
Identity = 72/107 (67.29%), Postives = 85/107 (79.44%), Query Frame = 1

Query: 12  LNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYPD-- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PL E+QIVTFFT K+G C+E+VYVH P+  
Sbjct: 46  LNPCAKEWNPFKERAPEEDRCLFLTFSNGYPLAENQIVTFFTNKFGPCVEKVYVHSPEPT 105

Query: 72  GGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
              +PPLFGKVVF AS IPAVIL G ++ KF +D K +WCKKFE +K
Sbjct: 106 SVSEPPLFGKVVFTASYIPAVILCGAKQTKFMVDGKPLWCKKFEPKK 152

BLAST of ClCG05G000350 vs. TrEMBL
Match: A0A067K989_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14611 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.9e-34
Identity = 71/114 (62.28%), Postives = 86/114 (75.44%), Query Frame = 1

Query: 12  LNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYP--- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PL E+QI  FFT+KYG  +ERVYVH+P   
Sbjct: 171 LNPFAKEWNPTLEKAPEEDRCLFLTFSNGYPLTEYQITNFFTQKYGPFVERVYVHWPNPK 230

Query: 72  DGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTRAS 123
           +G K  PLFGKVVF AS IP +IL G+ E KF++D+K +WCK+F+  K   R S
Sbjct: 231 NGKKTSPLFGKVVFRASFIPILILNGQNEVKFWVDAKPLWCKRFDPEKKNRRNS 284

BLAST of ClCG05G000350 vs. TrEMBL
Match: B9MV19_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05440g PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.9e-34
Identity = 71/110 (64.55%), Postives = 87/110 (79.09%), Query Frame = 1

Query: 9   GADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYP 68
           G+ LNP+AKEWNPV + A EE+RCLFLTFSNG+PL E QI  FFT  YG+C+ERVYVH+P
Sbjct: 168 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 227

Query: 69  DGGKQ--PPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
           +   Q  PPLFGKVVF AS IPA+IL GK EAKF++D+K +W K+F  +K
Sbjct: 228 EPKDQGAPPLFGKVVFTASYIPAMILNGKTEAKFWVDAKPLWGKRFNPKK 277

BLAST of ClCG05G000350 vs. TrEMBL
Match: B9RD30_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609130 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.0e-33
Identity = 69/109 (63.30%), Postives = 85/109 (77.98%), Query Frame = 1

Query: 12  LNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYG-ACIERVYVHYPD- 71
           LNP A+EWNP  +   EEDRCLFLTFSNG+PL E QI+ FF  KYG +C+ERVYVH+PD 
Sbjct: 162 LNPFAEEWNPTVERVSEEDRCLFLTFSNGYPLTETQILKFFNEKYGPSCVERVYVHWPDP 221

Query: 72  --GGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
             G K+PPLFGKVVF A  IP VIL GK+EAKF++D + +WCK+F+ +K
Sbjct: 222 RSGRKEPPLFGKVVFKAFYIPVVILNGKKEAKFWVDKRPLWCKRFDPKK 270

BLAST of ClCG05G000350 vs. TAIR10
Match: AT5G13620.1 (AT5G13620.1 unknown protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13
Identity = 35/100 (35.00%), Postives = 58/100 (58.00%), Query Frame = 1

Query: 26  APEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVVFVAS 85
           A E+DR +FLTFS G+PL+E ++  +FTR++G  IE + +   +G +Q      V+  A+
Sbjct: 197 AREDDRTVFLTFSRGYPLSEAEVHAYFTRRFGEIIEAIIMPGGEGNEQALYAKMVLHSAA 256

Query: 86  SIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTRASAPA 126
            IP ++ +G E  K+ I+ K +W +K+  R +     AP+
Sbjct: 257 MIPEIVSDGIERNKYTINGKHVWARKYIPRSSINNNLAPS 296

BLAST of ClCG05G000350 vs. TAIR10
Match: AT1G64870.1 (AT1G64870.1 unknown protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-11
Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 1

Query: 19  WNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGA-CIERVYVHYPDGG------ 78
           WN  +  A +++R +FLTFS GFP++  +++  FT  YG  C+E VY+   DGG      
Sbjct: 192 WNANH-VATDKERTVFLTFSRGFPVSHAEVIHLFTEIYGEDCVESVYMP-EDGGNSSNDN 251

Query: 79  ------KQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
                 +Q PLF K+V  +      IL G+E+ K+ I+ K +W +KF+  K
Sbjct: 252 TNCNGHQQQPLFAKMVLDSVVTVDRILSGQEKQKYKINGKHIWARKFKNNK 300

BLAST of ClCG05G000350 vs. TAIR10
Match: AT1G49290.1 (AT1G49290.1 unknown protein)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-10
Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 1

Query: 29  EDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYPDGGKQPPLFGKVV--FVASS 88
           +DR +FLTFS G+P++E ++  +FTR++G  IE V +   +  +Q PLF K+V     +S
Sbjct: 240 DDRTVFLTFSKGYPISEAEVRVYFTRRFGEVIEAVEMQEVEANEQ-PLFAKMVMKLQCAS 299

Query: 89  IPAVILEGKEEAKFFIDSKTMWCKKF 113
           +   I+  +   KF ID K +W +K+
Sbjct: 300 MMDEIVSARFRNKFTIDGKHVWARKY 324

BLAST of ClCG05G000350 vs. TAIR10
Match: AT5G11220.1 (AT5G11220.1 unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.0e-10
Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 1

Query: 26  APEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGA-CIERVYV----------HYPDGGKQP 85
           A + +R +F+TFS GFP+++ ++  FFT+ YG  C+E VY+          +  D G+Q 
Sbjct: 162 ATDNERTMFITFSRGFPVSQAEVKRFFTKNYGENCVEGVYMKEDNKNFLNANGNDNGQQQ 221

Query: 86  PLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKF 113
            LF K+V  + +    IL+G++  +F  + K +W +K+
Sbjct: 222 SLFAKLVLNSVATVDRILDGEKIKRFKSNGKHIWARKY 259

BLAST of ClCG05G000350 vs. TAIR10
Match: AT3G45200.1 (AT3G45200.1 unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 5.3e-10
Identity = 34/110 (30.91%), Postives = 60/110 (54.55%), Query Frame = 1

Query: 19  WNPVYDC-APEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGA-CIERVYVHYPD------- 78
           WN   +C A E DR LFLTFS G+P+   +I+  FT++YG  C+E VY+ + +       
Sbjct: 193 WNA--NCIATENDRTLFLTFSRGYPVTHAEIIELFTKEYGENCVEGVYMQHDNKRSFNAN 252

Query: 79  ---GGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
                +Q  LF ++V  + +    +L+ +++ +  I  K +W +K++ R+
Sbjct: 253 ANRSCEQQSLFARLVLDSVTTVDRVLDDEQKKELMIYGKNIWARKYDKRE 300

BLAST of ClCG05G000350 vs. NCBI nr
Match: gi|700201235|gb|KGN56368.1| (hypothetical protein Csa_3G118030 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 3.9e-55
Identity = 107/129 (82.95%), Postives = 116/129 (89.92%), Query Frame = 1

Query: 1   MGTVEGFNGADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACI 60
           MGTVE FNGADLNPNAKEWNP+YDCAPEEDRCLFLTFSNGFPL E+QIVTFFTR      
Sbjct: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTR------ 60

Query: 61  ERVYVHYPDGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTR 120
             VYVHYP+GGKQ PLFGKVVFVASSIPA++L GKEEAKF ID+KTMWCKKFE+RKAR+R
Sbjct: 61  --VYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSR 120

Query: 121 ASAPASQRR 130
           ASAPAS+RR
Sbjct: 121 ASAPASRRR 121

BLAST of ClCG05G000350 vs. NCBI nr
Match: gi|567905778|ref|XP_006445377.1| (hypothetical protein CICLE_v10024012mg [Citrus clementina])

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-34
Identity = 72/107 (67.29%), Postives = 85/107 (79.44%), Query Frame = 1

Query: 12  LNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYPD-- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PL E+QIVTFFT K+G C+E+VYVH P+  
Sbjct: 46  LNPCAKEWNPFKERAPEEDRCLFLTFSNGYPLAENQIVTFFTNKFGPCVEKVYVHSPEPT 105

Query: 72  GGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
              +PPLFGKVVF AS IPAVIL G ++ KF +D K +WCKKFE +K
Sbjct: 106 SVSEPPLFGKVVFTASYIPAVILCGAKQTKFMVDGKPLWCKKFEPKK 152

BLAST of ClCG05G000350 vs. NCBI nr
Match: gi|802700956|ref|XP_012083856.1| (PREDICTED: uncharacterized protein LOC105643369 [Jatropha curcas])

HSP 1 Score: 151.8 bits (382), Expect = 8.4e-34
Identity = 71/114 (62.28%), Postives = 86/114 (75.44%), Query Frame = 1

Query: 12  LNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYP--- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PL E+QI  FFT+KYG  +ERVYVH+P   
Sbjct: 171 LNPFAKEWNPTLEKAPEEDRCLFLTFSNGYPLTEYQITNFFTQKYGPFVERVYVHWPNPK 230

Query: 72  DGGKQPPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARKARTRAS 123
           +G K  PLFGKVVF AS IP +IL G+ E KF++D+K +WCK+F+  K   R S
Sbjct: 231 NGKKTSPLFGKVVFRASFIPILILNGQNEVKFWVDAKPLWCKRFDPEKKNRRNS 284

BLAST of ClCG05G000350 vs. NCBI nr
Match: gi|566202713|ref|XP_006375225.1| (hypothetical protein POPTR_0014s05440g [Populus trichocarpa])

HSP 1 Score: 151.8 bits (382), Expect = 8.4e-34
Identity = 71/110 (64.55%), Postives = 87/110 (79.09%), Query Frame = 1

Query: 9   GADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYP 68
           G+ LNP+AKEWNPV + A EE+RCLFLTFSNG+PL E QI  FFT  YG+C+ERVYVH+P
Sbjct: 168 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 227

Query: 69  DGGKQ--PPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
           +   Q  PPLFGKVVF AS IPA+IL GK EAKF++D+K +W K+F  +K
Sbjct: 228 EPKDQGAPPLFGKVVFTASYIPAMILNGKTEAKFWVDAKPLWGKRFNPKK 277

BLAST of ClCG05G000350 vs. NCBI nr
Match: gi|743935671|ref|XP_011012208.1| (PREDICTED: uncharacterized protein LOC105116509 [Populus euphratica])

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-33
Identity = 70/110 (63.64%), Postives = 88/110 (80.00%), Query Frame = 1

Query: 9   GADLNPNAKEWNPVYDCAPEEDRCLFLTFSNGFPLNEHQIVTFFTRKYGACIERVYVHYP 68
           G+ LNP+AKEWNPV + A EE+RCLFLTFSNG+PL E QI  FFT  YG+C+ERVYVH+P
Sbjct: 169 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 228

Query: 69  DGGKQ--PPLFGKVVFVASSIPAVILEGKEEAKFFIDSKTMWCKKFEARK 117
           +   Q  PPLFGKVVF AS +PA+IL GK EAKF++D+K +W K+F+ +K
Sbjct: 229 EPKDQGAPPLFGKVVFTASYVPAMILNGKIEAKFWVDAKPLWGKRFKPKK 278

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L3N4_CUCSA2.7e-5582.95Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118030 PE=4 SV=1[more]
V4TYD6_9ROSI6.9e-3567.29Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024012mg PE=4 SV=1[more]
A0A067K989_JATCU5.9e-3462.28Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14611 PE=4 SV=1[more]
B9MV19_POPTR5.9e-3464.55Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05440g PE=4 SV=1[more]
B9RD30_RICCO5.0e-3363.30Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609130 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G13620.11.3e-1335.00 unknown protein[more]
AT1G64870.11.3e-1136.04 unknown protein[more]
AT1G49290.11.8e-1037.21 unknown protein[more]
AT5G11220.14.0e-1032.65 unknown protein[more]
AT3G45200.15.3e-1030.91 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700201235|gb|KGN56368.1|3.9e-5582.95hypothetical protein Csa_3G118030 [Cucumis sativus][more]
gi|567905778|ref|XP_006445377.1|1.0e-3467.29hypothetical protein CICLE_v10024012mg [Citrus clementina][more]
gi|802700956|ref|XP_012083856.1|8.4e-3462.28PREDICTED: uncharacterized protein LOC105643369 [Jatropha curcas][more]
gi|566202713|ref|XP_006375225.1|8.4e-3464.55hypothetical protein POPTR_0014s05440g [Populus trichocarpa][more]
gi|743935671|ref|XP_011012208.1|1.4e-3363.64PREDICTED: uncharacterized protein LOC105116509 [Populus euphratica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G000350.1ClCG05G000350.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33527FAMILY NOT NAMEDcoord: 9..117
score: 2.8
NoneNo IPR availablePANTHERPTHR33527:SF6SUBFAMILY NOT NAMEDcoord: 9..117
score: 2.8