Csa3G118030 (gene) Cucumber (Chinese Long) v2

NameCsa3G118030
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionF13O11.17 protein
LocationChr3 : 6481762 .. 6482486 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCACAGTTGAGGTCTTTAATGGTGCTGATTTAAATCCTAATGCAAAAGAATGGAACCCTATTTACGATTGCGCTCCGGAGGAAGACCGATGCCTCTTTCTCACCTTCTCAAATGGCTTCCCCCTCACAGAGAACCAAATCGTCACCTTCTTCACCCGGTACGTGTACGTCTACCTATCTTTCTTTTTACTAACAATATACGTTAAATCAAGCAAATAGTATATGTATGAGGTTTATGCAGGTTAAGAACCAGACCATGTTTTAAGTGGTATATATATATAAATATATAATACACACACACACATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTTGTTTTAGGTTCGCTCTCGATTTGTTAATGTTATAGAACTTATCCAATTTTAAGTAATGTAGAAAATTCGGAGCGTGCATCGAAAGGGTGTACGTGCATTATCCGGAGGGAGGGAAACAACTGCCATTGTTTGGGAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAATCGTTCTTGGAGGAAAAGAAGAAGCTAAGTTTTCTATTGATACCAAGACGATGTGGTGTAAGAAATTCGAGTCTCGAAAAGCTCGGTCTAGGGCTTCAGCCCCAGCTTCTCGACGACGATAA

mRNA sequence

ATGGGCACAGTTGAGGTCTTTAATGGTGCTGATTTAAATCCTAATGCAAAAGAATGGAACCCTATTTACGATTGCGCTCCGGAGGAAGACCGATGCCTCTTTCTCACCTTCTCAAATGGCTTCCCCCTCACAGAGAACCAAATCGTCACCTTCTTCACCCGGGTGTACGTGCATTATCCGGAGGGAGGGAAACAACTGCCATTGTTTGGGAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAATCGTTCTTGGAGGAAAAGAAGAAGCTAAGTTTTCTATTGATACCAAGACGATGTGGTGTAAGAAATTCGAGTCTCGAAAAGCTCGGTCTAGGGCTTCAGCCCCAGCTTCTCGACGACGATAA

Coding sequence (CDS)

ATGGGCACAGTTGAGGTCTTTAATGGTGCTGATTTAAATCCTAATGCAAAAGAATGGAACCCTATTTACGATTGCGCTCCGGAGGAAGACCGATGCCTCTTTCTCACCTTCTCAAATGGCTTCCCCCTCACAGAGAACCAAATCGTCACCTTCTTCACCCGGGTGTACGTGCATTATCCGGAGGGAGGGAAACAACTGCCATTGTTTGGGAAGGTGGTGTTTGTTGCATCTTCAATTCCAGCAATCGTTCTTGGAGGAAAAGAAGAAGCTAAGTTTTCTATTGATACCAAGACGATGTGGTGTAAGAAATTCGAGTCTCGAAAAGCTCGGTCTAGGGCTTCAGCCCCAGCTTCTCGACGACGATAA

Protein sequence

MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRVYVHYPEGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRASAPASRRR*
BLAST of Csa3G118030 vs. TrEMBL
Match: A0A0A0L3N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118030 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 3.0e-64
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1

Query: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRVYVHYP 60
           MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRVYVHYP
Sbjct: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRVYVHYP 60

Query: 61  EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRASAPASRR 120
           EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRASAPASRR
Sbjct: 61  EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRASAPASRR 120

Query: 121 R 122
           R
Sbjct: 121 R 121

BLAST of Csa3G118030 vs. TrEMBL
Match: V4TYD6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024012mg PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.4e-29
Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 1

Query: 12  LNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT--------RVYVHYPE-- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PL ENQIVTFFT        +VYVH PE  
Sbjct: 46  LNPCAKEWNPFKERAPEEDRCLFLTFSNGYPLAENQIVTFFTNKFGPCVEKVYVHSPEPT 105

Query: 72  GGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARS 112
              + PLFGKVVF AS IPA++L G ++ KF +D K +WCKKFE +K ++
Sbjct: 106 SVSEPPLFGKVVFTASYIPAVILCGAKQTKFMVDGKPLWCKKFEPKKKQA 155

BLAST of Csa3G118030 vs. TrEMBL
Match: A0A067K989_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14611 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.5e-28
Identity = 67/114 (58.77%), Postives = 77/114 (67.54%), Query Frame = 1

Query: 12  LNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT--------RVYVHYP--- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PLTE QI  FFT        RVYVH+P   
Sbjct: 171 LNPFAKEWNPTLEKAPEEDRCLFLTFSNGYPLTEYQITNFFTQKYGPFVERVYVHWPNPK 230

Query: 72  EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRAS 115
            G K  PLFGKVVF AS IP ++L G+ E KF +D K +WCK+F+  K   R S
Sbjct: 231 NGKKTSPLFGKVVFRASFIPILILNGQNEVKFWVDAKPLWCKRFDPEKKNRRNS 284

BLAST of Csa3G118030 vs. TrEMBL
Match: B9MV19_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05440g PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.7e-27
Identity = 66/110 (60.00%), Postives = 80/110 (72.73%), Query Frame = 1

Query: 9   GADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT--------RVYVHYP 68
           G+ LNP+AKEWNP+ + A EE+RCLFLTFSNG+PLTE+QI  FFT        RVYVH+P
Sbjct: 168 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 227

Query: 69  EGGKQ--LPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRK 109
           E   Q   PLFGKVVF AS IPA++L GK EAKF +D K +W K+F  +K
Sbjct: 228 EPKDQGAPPLFGKVVFTASYIPAMILNGKTEAKFWVDAKPLWGKRFNPKK 277

BLAST of Csa3G118030 vs. TrEMBL
Match: B9RD30_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609130 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.3e-26
Identity = 61/109 (55.96%), Postives = 77/109 (70.64%), Query Frame = 1

Query: 12  LNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT---------RVYVHYPE- 71
           LNP A+EWNP  +   EEDRCLFLTFSNG+PLTE QI+ FF          RVYVH+P+ 
Sbjct: 162 LNPFAEEWNPTVERVSEEDRCLFLTFSNGYPLTETQILKFFNEKYGPSCVERVYVHWPDP 221

Query: 72  --GGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRK 109
             G K+ PLFGKVVF A  IP ++L GK+EAKF +D + +WCK+F+ +K
Sbjct: 222 RSGRKEPPLFGKVVFKAFYIPVVILNGKKEAKFWVDKRPLWCKRFDPKK 270

BLAST of Csa3G118030 vs. TAIR10
Match: AT5G13620.1 (AT5G13620.1 unknown protein)

HSP 1 Score: 62.0 bits (149), Expect = 2.9e-10
Identity = 37/100 (37.00%), Postives = 57/100 (57.00%), Query Frame = 1

Query: 26  APEEDRCLFLTFSNGFPLTENQIVTFFTRVY------VHYPEG-GKQLPLFGKVVF-VAS 85
           A E+DR +FLTFS G+PL+E ++  +FTR +      +  P G G +  L+ K+V   A+
Sbjct: 197 AREDDRTVFLTFSRGYPLSEAEVHAYFTRRFGEIIEAIIMPGGEGNEQALYAKMVLHSAA 256

Query: 86  SIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRASAPA 118
            IP IV  G E  K++I+ K +W +K+  R + +   AP+
Sbjct: 257 MIPEIVSDGIERNKYTINGKHVWARKYIPRSSINNNLAPS 296

BLAST of Csa3G118030 vs. TAIR10
Match: AT1G64870.1 (AT1G64870.1 unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 3.8e-10
Identity = 35/110 (31.82%), Postives = 57/110 (51.82%), Query Frame = 1

Query: 19  WNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRVY-------VHYPEGG-------- 78
           WN  +  A +++R +FLTFS GFP++  +++  FT +Y       V+ PE G        
Sbjct: 192 WNANH-VATDKERTVFLTFSRGFPVSHAEVIHLFTEIYGEDCVESVYMPEDGGNSSNDNT 251

Query: 79  -----KQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRK 109
                +Q PLF K+V  +      +L G+E+ K+ I+ K +W +KF++ K
Sbjct: 252 NCNGHQQQPLFAKMVLDSVVTVDRILSGQEKQKYKINGKHIWARKFKNNK 300

BLAST of Csa3G118030 vs. TAIR10
Match: AT1G49290.1 (AT1G49290.1 unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.2e-06
Identity = 27/85 (31.76%), Postives = 45/85 (52.94%), Query Frame = 1

Query: 29  EDRCLFLTFSNGFPLTENQIVTFFTRVYVHYPEG-------GKQLPLFGKVV--FVASSI 88
           +DR +FLTFS G+P++E ++  +FTR +    E          + PLF K+V     +S+
Sbjct: 240 DDRTVFLTFSKGYPISEAEVRVYFTRRFGEVIEAVEMQEVEANEQPLFAKMVMKLQCASM 299

Query: 89  PAIVLGGKEEAKFSIDTKTMWCKKF 105
              ++  +   KF+ID K +W +K+
Sbjct: 300 MDEIVSARFRNKFTIDGKHVWARKY 324

BLAST of Csa3G118030 vs. TAIR10
Match: AT3G45200.1 (AT3G45200.1 unknown protein)

HSP 1 Score: 47.8 bits (112), Expect = 5.7e-06
Identity = 33/110 (30.00%), Postives = 52/110 (47.27%), Query Frame = 1

Query: 19  WNPIYDC-APEEDRCLFLTFSNGFPLTENQIVTFFTRVY-------VHYPEGGK------ 78
           WN   +C A E DR LFLTFS G+P+T  +I+  FT+ Y       V+     K      
Sbjct: 193 WNA--NCIATENDRTLFLTFSRGYPVTHAEIIELFTKEYGENCVEGVYMQHDNKRSFNAN 252

Query: 79  ------QLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRK 109
                 Q  LF ++V  + +    VL  +++ +  I  K +W +K++ R+
Sbjct: 253 ANRSCEQQSLFARLVLDSVTTVDRVLDDEQKKELMIYGKNIWARKYDKRE 300

BLAST of Csa3G118030 vs. NCBI nr
Match: gi|700201235|gb|KGN56368.1| (hypothetical protein Csa_3G118030 [Cucumis sativus])

HSP 1 Score: 252.3 bits (643), Expect = 4.3e-64
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1

Query: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRVYVHYP 60
           MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRVYVHYP
Sbjct: 1   MGTVEVFNGADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFTRVYVHYP 60

Query: 61  EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRASAPASRR 120
           EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRASAPASRR
Sbjct: 61  EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRASAPASRR 120

Query: 121 R 122
           R
Sbjct: 121 R 121

BLAST of Csa3G118030 vs. NCBI nr
Match: gi|567905778|ref|XP_006445377.1| (hypothetical protein CICLE_v10024012mg [Citrus clementina])

HSP 1 Score: 135.2 bits (339), Expect = 7.7e-29
Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 1

Query: 12  LNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT--------RVYVHYPE-- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PL ENQIVTFFT        +VYVH PE  
Sbjct: 46  LNPCAKEWNPFKERAPEEDRCLFLTFSNGYPLAENQIVTFFTNKFGPCVEKVYVHSPEPT 105

Query: 72  GGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARS 112
              + PLFGKVVF AS IPA++L G ++ KF +D K +WCKKFE +K ++
Sbjct: 106 SVSEPPLFGKVVFTASYIPAVILCGAKQTKFMVDGKPLWCKKFEPKKKQA 155

BLAST of Csa3G118030 vs. NCBI nr
Match: gi|802700956|ref|XP_012083856.1| (PREDICTED: uncharacterized protein LOC105643369 [Jatropha curcas])

HSP 1 Score: 132.5 bits (332), Expect = 5.0e-28
Identity = 67/114 (58.77%), Postives = 77/114 (67.54%), Query Frame = 1

Query: 12  LNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT--------RVYVHYP--- 71
           LNP AKEWNP  + APEEDRCLFLTFSNG+PLTE QI  FFT        RVYVH+P   
Sbjct: 171 LNPFAKEWNPTLEKAPEEDRCLFLTFSNGYPLTEYQITNFFTQKYGPFVERVYVHWPNPK 230

Query: 72  EGGKQLPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRKARSRAS 115
            G K  PLFGKVVF AS IP ++L G+ E KF +D K +WCK+F+  K   R S
Sbjct: 231 NGKKTSPLFGKVVFRASFIPILILNGQNEVKFWVDAKPLWCKRFDPEKKNRRNS 284

BLAST of Csa3G118030 vs. NCBI nr
Match: gi|566202713|ref|XP_006375225.1| (hypothetical protein POPTR_0014s05440g [Populus trichocarpa])

HSP 1 Score: 130.2 bits (326), Expect = 2.5e-27
Identity = 66/110 (60.00%), Postives = 80/110 (72.73%), Query Frame = 1

Query: 9   GADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT--------RVYVHYP 68
           G+ LNP+AKEWNP+ + A EE+RCLFLTFSNG+PLTE+QI  FFT        RVYVH+P
Sbjct: 168 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 227

Query: 69  EGGKQ--LPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRK 109
           E   Q   PLFGKVVF AS IPA++L GK EAKF +D K +W K+F  +K
Sbjct: 228 EPKDQGAPPLFGKVVFTASYIPAMILNGKTEAKFWVDAKPLWGKRFNPKK 277

BLAST of Csa3G118030 vs. NCBI nr
Match: gi|743935671|ref|XP_011012208.1| (PREDICTED: uncharacterized protein LOC105116509 [Populus euphratica])

HSP 1 Score: 129.4 bits (324), Expect = 4.2e-27
Identity = 65/110 (59.09%), Postives = 81/110 (73.64%), Query Frame = 1

Query: 9   GADLNPNAKEWNPIYDCAPEEDRCLFLTFSNGFPLTENQIVTFFT--------RVYVHYP 68
           G+ LNP+AKEWNP+ + A EE+RCLFLTFSNG+PLTE+QI  FFT        RVYVH+P
Sbjct: 169 GSKLNPSAKEWNPVTERAAEENRCLFLTFSNGYPLTESQISRFFTMNYGSCVERVYVHWP 228

Query: 69  EGGKQ--LPLFGKVVFVASSIPAIVLGGKEEAKFSIDTKTMWCKKFESRK 109
           E   Q   PLFGKVVF AS +PA++L GK EAKF +D K +W K+F+ +K
Sbjct: 229 EPKDQGAPPLFGKVVFTASYVPAMILNGKIEAKFWVDAKPLWGKRFKPKK 278

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L3N4_CUCSA3.0e-64100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118030 PE=4 SV=1[more]
V4TYD6_9ROSI5.4e-2960.91Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024012mg PE=4 SV=1[more]
A0A067K989_JATCU3.5e-2858.77Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14611 PE=4 SV=1[more]
B9MV19_POPTR1.7e-2760.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05440g PE=4 SV=1[more]
B9RD30_RICCO3.3e-2655.96Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609130 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G13620.12.9e-1037.00 unknown protein[more]
AT1G64870.13.8e-1031.82 unknown protein[more]
AT1G49290.11.2e-0631.76 unknown protein[more]
AT3G45200.15.7e-0630.00 unknown protein[more]
Match NameE-valueIdentityDescription
gi|700201235|gb|KGN56368.1|4.3e-64100.00hypothetical protein Csa_3G118030 [Cucumis sativus][more]
gi|567905778|ref|XP_006445377.1|7.7e-2960.91hypothetical protein CICLE_v10024012mg [Citrus clementina][more]
gi|802700956|ref|XP_012083856.1|5.0e-2858.77PREDICTED: uncharacterized protein LOC105643369 [Jatropha curcas][more]
gi|566202713|ref|XP_006375225.1|2.5e-2760.00hypothetical protein POPTR_0014s05440g [Populus trichocarpa][more]
gi|743935671|ref|XP_011012208.1|4.2e-2759.09PREDICTED: uncharacterized protein LOC105116509 [Populus euphratica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G118030.1Csa3G118030.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33527FAMILY NOT NAMEDcoord: 9..112
score: 2.2
NoneNo IPR availablePANTHERPTHR33527:SF6SUBFAMILY NOT NAMEDcoord: 9..112
score: 2.2