Carg08016 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08016
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	auxilin-related protein 2 isoform X2
Location	Cucurbita_argyrosperma_scaffold_050 : 202589 .. 209330 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATCGATACCACTCCCTTCGAATTCGGCGGCGACGGTGACGGCGGCCGTCGATGCGGCAAGTCTTGCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAGGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAAGTGAGTCCGCCATGAAAGCTCTGAGAAAGAGAAGCAATAGAAGGCCAGAAACATTCGATTGCTTTGAGTTCTTGAAATTCGTGTGGTGCTTCATATTTTAACTCTCTTCTTCTTCCACGAACATCGATTCGAATGTCTATATCCATCGATGAATTTCGATCTCCTTGTTTGTTTTCTTTCTCCTTCTTCTTCCTTGCTCGATCGATGCTGAATCATCGAAATTTTCCGAGCGAGGATTTGTAATTAATTAGAATTGTGATCTCTGGATCCGTCAATTGAAATGATTAAAATGCTTCAGATATCATCGATCTCTGCTCGTTTCAATCTGTTTGTATAGGAAGACGAGTGAAAATTGTGCTCTGAATCTGAATAATTTTCTTGGAATCCAAACAGTATTAGGTGAACCGAATGATGCCAAAATTTTGCTTGATCAACTCGAATTCCTTGGAAAGCAATTTGCATTCTACAATAATGGAGTTGTTGATAAATCTCTCTGTTCTTATTTTTCAATTGTCACACGTGAAAATCAAGTGTAAATATGAAGAAGAAGAACAACAACAAATTAGTGAAAAACAAAATTCAAATCCAATAAAACATATAAAATAATTCAAACATTTTTTGAAATTATGATTTGGAAAATGAACCCACCAAATTTGTCTGGACTAAAAAAAATAATAACTTTGACCAAACCAAATAATTTATTTGGTTTATTAGAGTGACCTTTAATTCGGAATAGCACGACCTAGCAACATTTTTATTAAAAATGTATAAAAAAAAAAAATTAGAGTGACTCCTAATTCGAAATGATATAGAATAAAAATTTTAACATATCGGGAAACGACCTTACTACTTATAATTTTAAAAGTTTAATTTAGTTTGCACGGACTAAATTTAATATAAATTATAATATGGTTAGAAAATTTTGATTTTTATTATAAAATAAAATAGAAAATAATAAATAAAAAAGAGGTGAGGAAAATAAAATTTATAAATTGGAGGTTTGACCGTCGGTGCATTTGGTTGTGTTGATGCTTTCCAAGTTTGATTGCCAAAGAGCTTATCATATTCCTTTTTCCTCCACTCATTTTTTTTATATATTTTTTAATATTATTATTATTATTATTGTAAACATTATAAACATTATTTTATTTCTCAAACTTCTGACCTATAGAGGATTCATTTTGTCTGTGCATCACTTGAAACCGACCATCCATTTTTAAATCACAATAATTCCAATAATCTCAAGTGTTATTTTATTTTTTTTATTTTTTCAATGTTTTTAATTTAAAAATAATTGTGGGAACCGAAATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTACCTATTAGGAATGGGTTATTATTGCAAATTTATATTTCAGAAAATAAACAGAATTTTCCTTCCATTTTGGGCCTTGAATGGGCCCAACATGAATACAGGCCACGGCCCGTAATTTACTTAAAGCCCACATTCAAAAAAGCCTCGATACAATTTTTTTATTTTTTATTTTTAATTAGGTTAAATTATAAATGTTTGTGTATATTTTATTATTAAAATATTTAAAAGTATTTAATAAATTATATGTTTAACAATAAGCATAATTAAGTTCTCCATAAATCCTGTTATTACTAAGGTTTGTACATTTAAAATAAAGAACAATAAGAGGATTTTACACATTAATTAATCAGTTAAATTATGTAGCCGTTCGACGGTTTTCCACGGTCAACGTCAAACGGTCTTCAGAGCCGTTATCCGTCACGCCAGCTGTCTCGACCTGCGCGGATTTTACACAGACTATATATTTCTCCCGCAGTCACACTCTTATTCGGCACATTCTCATACTAGAATCAGAGCGCTCCATCAATGGCCTCTTCCCTTTTGAGTGTTCGTTGCCGAAATCAAACGGATCATTACCAGGCAATCGGAGAGCAGAATCGAAAGAAGTATCTCGCCTCGTCTCGGTGATGCAAATAGAGGTAATGTAACTTAATTTCAGCCGGCTATTCCGAATTAGGGGTTCATTGGAGAACTTAATCAAATGATTGTTCGTTTTTGTCGACACGTTTTGTATTTTTTCGTGGTTTCGATTACGGAGGATTAGGGCGTTTTTAGTAGGTTCATTGCTCCCATGGTAGCGTGATTATTATCTTGGACTCCTCGTTTCATTCCCTGTCATCTTCTATCTCTTCTCTGTGTGATGAGCCAATGGACAATCCTGATATTCAAATTTATGTATTGGCAGAAGAGAGCAGGACGACGAACTCTTATGTCATCGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTTGTTCTTGATGAAGTGATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGGTATGATTCCAACCCCAAGGCTGTGAAGTTGAATTTAAGTTTTTAGGGGGCGTGGGAAGTAAATGTTGTTTTGAAGTTTTTATTTTATTTTATTTATCATTTGTTGGCTGTGAAGTTGTGTATTGTAGCTTTAGCTTCTTTAGATGTTACCTCTGTTTGGATTATGTCAACATTTGACTGCAAGTAAGAACAGATCACAAAATATTGCTTGAAACATGTCTGGCAATGCTACTAATTCTTAGATTTCTCAATTACTCAACTAACATGTTTAGAAACGAAACTGAGAGGCCTTTCAGGGTGCATCTTCCTTCTTATATTCCTCAAGCTTAGTACAGCACAGAACATATTTAAGACAACACTTTTTGTGCAGGACACCCTAACTGAAGGCACTATATAGTGCCAGTTCACAAAAAGAGTCAATAGGTTTAACTTTATCTTGGATACCACATGATTCCTTTCGATCCAATATAAAAGCTTCTAGCAGAAAGGACCAACCTCTAGCAGAAAAATTACAATGCAGGAACAAAAGGTCAAAGATTTTCTCTTCTTTTTAGTACATACAGCAAGCATTTGGAACTTTTGGAGCTTTTCCATGAATGTCAAGGCAAAAAGATACACTCTCAGCTTCTACAAAGCGGATTACCCTCTAACAAACTGCCACAAACAATCATAACGAACATCGTGTATACACTTCGGTGATTTGGGGTCTACCAGTTTTCTGGCACTAATTTTCGTTAGGCTGTAATATGACATGACAACATCCTCTGATTAAGTGATATATGCAGATTCTTCCATAGATTTTTTTTTTTTACCAATTTGAACAACATTCAGTTTTTGCTGTTTTATATTTTCAATGTGTGAATTAACAGCCCTGCAAAATGAAGGACAAACTTTGTTTTATTTTCTATTAAGTTTACGAGTTAAAACTTTTTGACATTTTCTGTTTCTTATATTTTCTCTTAAAGGTAGAAGAAAGAATTTGATCAGCTGAAGAGGAGAATGGCAAAGTCTAAGAAATAATTTGGTCTGCTGAAGAGGAAAAGGTAAGAGTCTAAAAAAGATGTAAGCATCTGATGTGAGTGAATTTAAAATGATCTTGTTGCTTAAGAAGTTTTTGTGTCTTACTAGCTTGCTTCATTGGAAATTATTATATGACTGCAAGTCACCTGACAAGGTGCAAAAATGTTTGAATGAGATTTGGCAATTGAATAACACTATATCAGGAAGAGGGATCACACAAAGGAAGTTTTTTGATTAAGGAATGAGGGATCACACTAAAGTGAAGAATTGTTTGATTAAGGAATGAGGGATCACACAAAGGAAGTTTTTTAAATTTTAGAGGAAGGAAGCACTCGAAAAAAAGATTTGCTTCATTGATTGGTGATAAAGAAAAGTTAAAATGTATTTGGTCTATAAATTTGTTAATGGACAATTTTTTGGATATTTTTAGTTTGTGAAAGTTATGTGTGTAAGGAAGGAAAGAACAAAAGTTTGGATACAAGAATTGTGGGTTAAAGTAGTATGAGAATGGTGGATCAAGGACTATTCACTTTCATAAACGTTATGACCGAAAATGGAAGTTTGTTCAAATTGGAGATTTGAAAAGCTTATTTTGGAACCAAGAAATAGGATGTCATATGCCATGAGAAGTAGCAAAGAACTTGAATCAAGGACATGGAAGTGAAGAATTGTTGGAATCAAGGAATGAGGGATTACAAGAATGATGGTTATGTATGTAAAGAAGGAAGGACGATAAATTTGGACTTTCAAGTTTTTGATTATGGACAATCTTTTGGAGCCTTTTAGTTTAATGGTTGGATATGAAAGGACGAAGGGAAGATAAGTTTGGATACAAGAATTTTTGTTTAAAGCATAAGATTGGACTTGCATTTTTTTATTTTTTTATTAGTTGTTCTTTGGATCCATAATAATTTTTGAAGTAGTCTAATGAGGTTTAATTTGAGGGAAGTGAATCTAAGTACTATAACGAGGAAATGGAGTATAATGAGGAAATAGAGTAAAAGAATTTTCTTAAAGAAAAGTTTTGAGTGTATTTGGTCTATAAATTAGGTAATGGTCAATTTTTTGGATCTTTTGAGTTTGATAGTTACGTAGGTAAGGAAGATGAATTTGAATATGGGAGATGTGAGTATAAGATTGGACTCCCTAGATAATCTTTTGGATTTTTTTTGTTTAATGGTTATGCATGAAAGGACGGAAGATAGATAAGTTTGGATACAAGAATTTTGGTTTAAAATTTGAGATTGAACTTCAAATTTTGATAGATGATTTCTCGTCATTCTCGGGATAAAAAATTATGTTTGAGTTAATATTGTCCAATGAAATTTTATTTGGGGCAAGTGAATAAATTGGTATGATGATGAAATAAGGTACTCTCTTCGAACTGTCTATAGGAGCTTCGTTGAAGAAATAAATGAGATAGATATCCTTATTTAAAGAGGAAAAAGATCCACTTAGTGTGGTAGATGGAGGACTATATTTTTTAATAGACAATAATTTCTAAGGACAATTGGAGAGCAAAGAATTAATGGAATCAAAGAAGACGGGATAGCCGAAGGAAGTTTGTCAAATTTTAGGGAATAGGAAACACTAATAAAAGAATTTGCTTAATTGGTTCTAAACAGTAAAATTATTGGACGTTGAAGCAAAGGTAGGCTGTGCAATATCTCTCGATGCTTATGGAAAATAAGAAATATAAAGGCCAATTAGTAGGAGATTTCGGCAATATCTTCCTGAAGACGAATGTTGCAAAATGTGAGCATCATAAGGTTTTTGCAACTGTAACCTGCCAAGCAAAACAAGTGATCCTTGCAGCCGCTCAAGGTTTTAGTCCTTACTTTTATTTCATTCTTATTTATGTGAAAGTAATTAGTTTGAAGTCCTCTTAACTGTCATAGGTTTGGTTACAAAACCACACAAATAATTAAAAGTTGTGAGAGAATGGATTTAAGTGGTCAAAGATTATACGTTTAAAAATTTAACAAAAAGAATAAAGAATCATGTGTTTGACTTAAAAATAATTAAGGCTAATATTTACAATCGAAGAGAGAGGAGGAAGGAGTGGTTATTAAAGACGGTAAGAGAAAATATCTATGAAAATGAAAGCTTAGCATTTATTATTTGACTGTCATGTTCGAAAATATTAAAGATCAATGGGGCCATGACAGCAATTTCTCTGACAATTAGACCCAACAAAGTCCTTAAACACTTGGCCGACTTCTTTGACTCTTAATTCCTCCTCATATCTTCAAGTTTAGTTAAGCTGTAATTTTCCTATAAATCAACCAATAGAACTAGCACTTAAAACTAGCTCGAGTCCTCAAGAATGGTGTCCCTGAAGATGATTTCCTTTGTGTTGAAGCTCCTAGTTTGCTTTGCATTGCTTCTGATTGCCTCGCCCATTTCTGCAATGGACAATACTCCTCGTATTCGTAAGACTCTTTTTCTTCACGTGTTCAAGAAGTTCTACATTAAGAATTCTTATAAAATTTCTTGTTATCTAACTTTTAGAACTATTTTCAAAATTTAAGTTAAGTTTTGAAAACTAAAACCAAATAGTTGTCAGATGTAGTCTACATTTAGGAGTAGTGTGTTTGTAACTCTTTCATGCAGGTAGGTTCCCACTATATTAATTGTGTTAGTGAAGTGGGTGCTAAGTGGGTGTTTAGATATCTCAACATGTTAAAGTTGATAGTGGACGGACCTAAAAGCAAGAGTATGGTCTAGCCATTGATCATGGGTCAATGACGAGCTGAGCTATATATTTCTAGTGGCCAGCCCGTGGCGGCAGAAAACAAACTTGAGTTAAAATAAGAAATATACCCATGAATGGATACGTTATCTTACCTTTCTCTTCAAATAAATGCCAATCAAAGTTAACTTTGTTTATGACAAAGTGTGGCTTTAATTACCCCATTTCAGCTCTTACACATGCTACTACAATGGTAGCAGCAGGAATTCGCTCGGCTTCTTCCGCTTTTTATAGTAATACCTTACATCTGGTGGTACGGGTTTCAGGTAAGATGGGGATGGAGTACAAGCTTGTTGGAAAGGCTGTGGTGGTAGCAAAACCAGTGAGACAATTGTCTGCTGATTCCCCATGGGGTGGTGGTTATCACATCCCTTAG

mRNA sequence

ATGGCCATCGATACCACTCCCTTCGAATTCGGCGGCGACGGTGACGGCGGCCGTCGATGCGGCAAGTCTTGCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAGGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAACCGTTCGACGGTTTTCCACGGTCAACGTCAAACGGTCTTCAGAGCCGTTATCCGTCACGCCAGCTGTCTCGACCTGCGCGGATTTTACACAGACTATATATTTCTCCCGCAGTCACACTCTTATTCGGCACATTCTCATACTAGAATCAGAGCGCTCCATCAATGGCCTCTTCCCTTTTGAGTGTTCGTTGCCGAAATCAAACGGATCATTACCAGGCAATCGGAGAGCAGAATCGAAAGAAGTATCTCGCCTCGTCTCGGTGATGCAAATAGAGGTTCATTGCTCCCATGGTAGCGTGATTATTATCTTGGACTCCTCGTTTCATTCCCTGTCATCTTCTATCTCTTCTCTGTGTGATGAGCCAATGGACAATCCTGATATTCAAATTTATGTATTGGCAGAAGAGAGCAGGACGACGAACTCTTATGTCATCGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTTGTTCTTGATGAAGTGATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGCTCCTAGTTTGCTTTGCATTGCTTCTGATTGCCTCGCCCATTTCTGCAATGGACAATACTCCTCGTATTCGTAAGATGGGGATGGAGTACAAGCTTGTTGGAAAGGCTGTGGTGGTAGCAAAACCAGTGAGACAATTGTCTGCTGATTCCCCATGGGGTGGTGGTTATCACATCCCTTAG

Coding sequence (CDS)

ATGGCCATCGATACCACTCCCTTCGAATTCGGCGGCGACGGTGACGGCGGCCGTCGATGCGGCAAGTCTTGCAGCAGACCTTCTAAGTACGACGTCGTCGGAGACATCTTCTTCGGTAAGGATGATATGAAGGAATACGCATGGGATGGAGCTTTCACTGAGAAAACGGTTCGATTCATTGAAACCGTTCGACGGTTTTCCACGGTCAACGTCAAACGGTCTTCAGAGCCGTTATCCGTCACGCCAGCTGTCTCGACCTGCGCGGATTTTACACAGACTATATATTTCTCCCGCAGTCACACTCTTATTCGGCACATTCTCATACTAGAATCAGAGCGCTCCATCAATGGCCTCTTCCCTTTTGAGTGTTCGTTGCCGAAATCAAACGGATCATTACCAGGCAATCGGAGAGCAGAATCGAAAGAAGTATCTCGCCTCGTCTCGGTGATGCAAATAGAGGTTCATTGCTCCCATGGTAGCGTGATTATTATCTTGGACTCCTCGTTTCATTCCCTGTCATCTTCTATCTCTTCTCTGTGTGATGAGCCAATGGACAATCCTGATATTCAAATTTATGTATTGGCAGAAGAGAGCAGGACGACGAACTCTTATGTCATCGAGTTTTGTTCCGATAACAGAGAGGGGAAGAACAAGGCAGTTGTTCTTGATGAAGTGATTGCTTGGGCAACAGAAAAGCAGTTCGTCTTGTCATTGAGGCTGGTTGGATTTTCGCATCTGCTAGGAATACTGCTCCTAGTTTGCTTTGCATTGCTTCTGATTGCCTCGCCCATTTCTGCAATGGACAATACTCCTCGTATTCGTAAGATGGGGATGGAGTACAAGCTTGTTGGAAAGGCTGTGGTGGTAGCAAAACCAGTGAGACAATTGTCTGCTGATTCCCCATGGGGTGGTGGTTATCACATCCCTTAG

Protein sequence

MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFIETVRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIYFSRSHTLIRHILILESERSINGLFPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAEESRTTNSYVIEFCSDNREGKNKAVVLDEVIAWATEKQFVLSLRLVGFSHLLGILLLVCFALLLIASPISAMDNTPRIRKMGMEYKLVGKAVVVAKPVRQLSADSPWGGGYHIP

Homology

[Close]

BLAST of Carg08016 vs. NCBI nr
Match: XP_022977832.1 (uncharacterized protein LOC111478006 isoform X2 [Cucurbita maxima] >XP_022977840.1 uncharacterized protein LOC111478006 isoform X2 [Cucurbita maxima] >XP_022977847.1 uncharacterized protein LOC111478006 isoform X2 [Cucurbita maxima])

HSP 1 Score: 99.0 bits (245), Expect = 3.0e-17
Identity = 80/207 (38.65%), Postives = 99/207 (47.83%), Query Frame = 0


Query: 71  VKRSSEPLSVTPAVSTCADFTQTIYF-SRSHTLIRHILILESERSINGLFPFECSLPKSN 130
           VKRSSEPL    A      FT  IY    SH+L++HIL L SE SINGLF FECSLPK  
Sbjct: 31  VKRSSEPLPGHRA------FTLVIYIPPHSHSLLQHILTLVSECSINGLFSFECSLPKPK 90

Query: 131 GSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSL----CDEPMD 190
                 R++E +          + ++    S  ++  +       SI+ L    C  P  
Sbjct: 91  AR--STRQSEEERAQAKGVECSLYIYIPPHSQSLLQHTLTLVSECSINGLFPLECSLPKP 150

Query: 191 NPD--------------------------IQIYVLAEESRTTNSYVIEFCSDNREGKNKA 247
           N                            + +    EE +TTNS VIE  +DN EGKN+ 
Sbjct: 151 NARSTRQSEEERAQAKGXXXXXXXXXXHIVSVVKNREERKTTNSDVIEIGADNGEGKNET 210

[Close]

BLAST of Carg08016 vs. NCBI nr
Match: XP_022977821.1 (uncharacterized protein LOC111478006 isoform X1 [Cucurbita maxima])

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-16
Identity = 79/202 (39.11%), Postives = 97/202 (48.02%), Query Frame = 0


Query: 71  VKRSSEPLSVTPAVSTCADFTQTIYF-SRSHTLIRHILILESERSINGLFPFECSLPKSN 130
           VKRSSEPL    A      FT  IY    SH+L++HIL L SE SINGLF FECSLPK  
Sbjct: 31  VKRSSEPLPGHRA------FTLVIYIPPHSHSLLQHILTLVSECSINGLFSFECSLPKPK 90

Query: 131 GSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSLSSSISSL----CDEPMD 190
                 R++E +          + ++    S  ++  +       SI+ L    C  P  
Sbjct: 91  AR--STRQSEEERAQAKGVECSLYIYIPPHSQSLLQHTLTLVSECSINGLFPLECSLPKP 150

Query: 191 NPD--------------------------IQIYVLAEESRTTNSYVIEFCSDNREGKNKA 242
           N                            + +    EE +TTNS VIE  +DN EGKN+ 
Sbjct: 151 NARSTRQSEEERAQAKGXXXXXXXXXXHIVSVVKNREERKTTNSDVIEIGADNGEGKNET 210

[Close]

BLAST of Carg08016 vs. NCBI nr
Match: XP_004134908.1 (PREDICTED: uncharacterized protein LOC101213807 [Cucumis sativus])

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-10
Identity = 59/127 (46.46%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 119 FPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSL------ 178
           FPF  S P  N  +      E KE  R  S      H S    I I  +S+ S+      
Sbjct: 187 FPFNRSAPMENQYVDN----EVKEPFR-SSYSGFPRHVSSPETISIEPTSYRSMKVSMDD 246

Query: 179 ------SSSISSLCDEPMDNPDIQIYVLAEE-SRTTNSYVIEFCSDNREGKNKAVVLDEV 233
                 SS+ISSLC     NPDIQI VLAEE     +SYVIE  SDNREG N+AV LDEV
Sbjct: 247 LEPNSPSSAISSLCQGSGANPDIQINVLAEEDDEVMSSYVIEIGSDNREGTNEAVALDEV 306

[Close]

BLAST of Carg08016 vs. NCBI nr
Match: XP_008439593.1 (PREDICTED: uncharacterized protein LOC103484343 [Cucumis melo])

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-10
Identity = 59/127 (46.46%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 119 FPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSL------ 178
           FPF  S P  N  +      E KE  R  S      H S    I I  +S+ S+      
Sbjct: 187 FPFNRSAPMENQYVDN----EVKEPFR-SSYSGFPRHVSSPETISIEPTSYRSMKVSMDD 246

Query: 179 ------SSSISSLCDEPMDNPDIQIYVLAEE-SRTTNSYVIEFCSDNREGKNKAVVLDEV 233
                 SS+ISSLC     NPDIQI VLAEE     +SYVIE  SDNREG N+AV LDEV
Sbjct: 247 FEPNSPSSAISSLCQGSGANPDIQINVLAEEDDEVMSSYVIEIGSDNREGTNEAVALDEV 306

[Close]

BLAST of Carg08016 vs. NCBI nr
Match: KGN49424.1 (hypothetical protein Csa_6G524620 [Cucumis sativus])

HSP 1 Score: 76.3 bits (186), Expect = 2.1e-10
Identity = 59/127 (46.46%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 119 FPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSL------ 178
           FPF  S P  N  +      E KE  R  S      H S    I I  +S+ S+      
Sbjct: 181 FPFNRSAPMENQYVDN----EVKEPFR-SSYSGFPRHVSSPETISIEPTSYRSMKVSMDD 240

Query: 179 ------SSSISSLCDEPMDNPDIQIYVLAEE-SRTTNSYVIEFCSDNREGKNKAVVLDEV 233
                 SS+ISSLC     NPDIQI VLAEE     +SYVIE  SDNREG N+AV LDEV
Sbjct: 241 LEPNSPSSAISSLCQGSGANPDIQINVLAEEDDEVMSSYVIEIGSDNREGTNEAVALDEV 300

[Close]

BLAST of Carg08016 vs. TrEMBL
Match: tr|A0A1S3AZ45|A0A1S3AZ45_CUCME (uncharacterized protein LOC103484343 OS=Cucumis melo OX=3656 GN=LOC103484343 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-10
Identity = 59/127 (46.46%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 119 FPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSL------ 178
           FPF  S P  N  +      E KE  R  S      H S    I I  +S+ S+      
Sbjct: 187 FPFNRSAPMENQYVDN----EVKEPFR-SSYSGFPRHVSSPETISIEPTSYRSMKVSMDD 246

Query: 179 ------SSSISSLCDEPMDNPDIQIYVLAEE-SRTTNSYVIEFCSDNREGKNKAVVLDEV 233
                 SS+ISSLC     NPDIQI VLAEE     +SYVIE  SDNREG N+AV LDEV
Sbjct: 247 FEPNSPSSAISSLCQGSGANPDIQINVLAEEDDEVMSSYVIEIGSDNREGTNEAVALDEV 306

[Close]

BLAST of Carg08016 vs. TrEMBL
Match: tr|A0A0A0KKR1|A0A0A0KKR1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524620 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-10
Identity = 59/127 (46.46%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 119 FPFECSLPKSNGSLPGNRRAESKEVSRLVSVMQIEVHCSHGSVIIILDSSFHSL------ 178
           FPF  S P  N  +      E KE  R  S      H S    I I  +S+ S+      
Sbjct: 181 FPFNRSAPMENQYVDN----EVKEPFR-SSYSGFPRHVSSPETISIEPTSYRSMKVSMDD 240

Query: 179 ------SSSISSLCDEPMDNPDIQIYVLAEE-SRTTNSYVIEFCSDNREGKNKAVVLDEV 233
                 SS+ISSLC     NPDIQI VLAEE     +SYVIE  SDNREG N+AV LDEV
Sbjct: 241 LEPNSPSSAISSLCQGSGANPDIQINVLAEEDDEVMSSYVIEIGSDNREGTNEAVALDEV 300

[Close]

BLAST of Carg08016 vs. TrEMBL
Match: tr|A0A0A0L658|A0A0A0L658_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 9.0e-10
Identity = 43/97 (44.33%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 1  MAIDTTPFEFGGDGDGGRRCGKSCSRPSKYDVVGDIFFGKDDMKEYAWDGAFTEKTVRFI 60
          MA D  PFEFGG G G    G            GDIFFGKDDMKEYAWDG +TE+TVRFI
Sbjct: 1  MARDILPFEFGGGGAGESERG------------GDIFFGKDDMKEYAWDGVYTEETVRFI 60

Query: 61 ET--VRRFSTVNVKRSSEPLSVTPAVSTCADFTQTIY 96
          ET   ++      +R  EP +       C +F + ++
Sbjct: 61 ETESAKKALRKRSRRKLEPFN-------CFEFLKIVW 78

[Close]

BLAST of Carg08016 vs. TrEMBL
Match: tr|A0A2K1YH96|A0A2K1YH96_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G081500v3 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-05
Identity = 42/104 (40.38%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 142 EVSRLVS---VMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAE-- 201
           +VSR VS    + +E H      I + D   +S SS  SSLC EP     +Q  V+ E  
Sbjct: 219 KVSRQVSSPETISLEPHSHRSIKISVDDLELNSPSSPASSLCHEPEAKAGVQCNVMLEEE 278

Query: 202 --------ESRTTNSYVIEFCSDNREGKNKAVVLDEVIAWATEK 233
                   E    +SYVIE  SD+REG  +AV +DE IAWA EK
Sbjct: 279 LEQVEDEDEDEVMSSYVIEINSDHREGTGEAVSIDEAIAWAKEK 322

[Close]

BLAST of Carg08016 vs. TrEMBL
Match: tr|A0A2K1YH72|A0A2K1YH72_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G081500v3 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-05
Identity = 42/104 (40.38%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 142 EVSRLVS---VMQIEVHCSHGSVIIILDSSFHSLSSSISSLCDEPMDNPDIQIYVLAE-- 201
           +VSR VS    + +E H      I + D   +S SS  SSLC EP     +Q  V+ E  
Sbjct: 199 KVSRQVSSPETISLEPHSHRSIKISVDDLELNSPSSPASSLCHEPEAKAGVQCNVMLEEE 258

Query: 202 --------ESRTTNSYVIEFCSDNREGKNKAVVLDEVIAWATEK 233
                   E    +SYVIE  SD+REG  +AV +DE IAWA EK
Sbjct: 259 LEQVEDEDEDEVMSSYVIEINSDHREGTGEAVSIDEAIAWAKEK 302

The following BLAST results are available for this feature:

BLAST of Carg08016 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977832.1	3.0e-17	38.65	uncharacterized protein LOC111478006 isoform X2 [Cucurbita maxima] >XP_022977840...	[more]
XP_022977821.1	1.1e-16	39.11	uncharacterized protein LOC111478006 isoform X1 [Cucurbita maxima]	[more]
XP_004134908.1	2.1e-10	46.46	PREDICTED: uncharacterized protein LOC101213807 [Cucumis sativus]	[more]
XP_008439593.1	2.1e-10	46.46	PREDICTED: uncharacterized protein LOC103484343 [Cucumis melo]	[more]
KGN49424.1	2.1e-10	46.46	hypothetical protein Csa_6G524620 [Cucumis sativus]	[more]

BLAST of Carg08016 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg08016 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg08016 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AZ45\|A0A1S3AZ45_CUCME	1.4e-10	46.46	uncharacterized protein LOC103484343 OS=Cucumis melo OX=3656 GN=LOC103484343 PE=...	[more]
tr\|A0A0A0KKR1\|A0A0A0KKR1_CUCSA	1.4e-10	46.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524620 PE=4 SV=1	[more]
tr\|A0A0A0L658\|A0A0A0L658_CUCSA	9.0e-10	44.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1	[more]
tr\|A0A2K1YH96\|A0A2K1YH96_POPTR	1.0e-05	40.38	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G081500v3 PE=...	[more]
tr\|A0A2K1YH72\|A0A2K1YH72_POPTR	1.0e-05	40.38	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G081500v3 PE=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08016-RA	Carg08016-RA	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08016	Cla006275	Watermelon (97103) v1	carwmB0373
Carg08016	Csa3G175640	Cucumber (Chinese Long) v2	carcuB0401
Carg08016	MELO3C006808	Melon (DHL92) v3.5.1	carmeB0381
Carg08016	ClCG05G007330	Watermelon (Charleston Gray)	carwcgB0372
Carg08016	CSPI03G15900	Wild cucumber (PI 183967)	carcpiB0406
Carg08016	Cucsa.251690	Cucumber (Gy14) v1	carcgyB0437
Carg08016	CmaCh04G003400	Cucurbita maxima (Rimu)	carcmaB0529
Carg08016	CmoCh16G002080	Cucurbita moschata (Rifu)	carcmoB0509
Carg08016	CmoCh04G003570	Cucurbita moschata (Rifu)	carcmoB0514
Carg08016	Lsi05G013270	Bottle gourd (USVL1VR-Ls)	carlsiB345
Carg08016	Cp4.1LG01g03790	Cucurbita pepo (Zucchini)	carcpeB0527
Carg08016	MELO3C006808.2	Melon (DHL92) v3.6.1	carmedB0385
Carg08016	CsaV3_3G016110	Cucumber (Chinese Long) v3	carcucB0404
Carg08016	Cla97C05G089080	Watermelon (97103) v2	carwmbB0398

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg08016	Carg16741	Silver-seed gourd	carcarB406

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08016	Wax gourd	carwgoB0461
Carg08016	Cucumber (Gy14) v2	carcgybB0381
Carg08016	Cucurbita maxima (Rimu)	carcmaB0526
Carg08016	Cucurbita pepo (Zucchini)	carcpeB0523