Cucsa.251690 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.251690
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold02229 : 696631 .. 697203 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGACTACTCGCCGATGGCCAGAGATATCCTTCCCTTCGAATTCGGGGgCGGCGGCGCGGGCGAGAGCGAGCGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGTTTACACGGAGGAAACAGTCCGATTCATCGAAACAGAATCCGCCAAGAAAGCTCTCAGAAAGAGAAGCAGAAGAAAGCTAGAACCCTTCAATTGCTTTGAGTTCTTGAAAATCGTTTGGTGTTTCAAATTCTAACTAACTCTCTTGATTCTCTCTTATTTTtCCTCTTTGTGGATCGAATCAAATGATTCCTGATCCTTTTCTTGTGCTTCCCTCGATCTCGATGCTCATTCATCGGAATTTTCCGAGCGAGGATATTTTGTAATTAGAAATTAATTAGAAATTTTGATTCCTGTATATACTTGAATTGCTTAGAAAGCTTCAGAATGTATATAAAATATCTTCTTGTTATTATTGTTGCAATTTCAATTCCAATTCCAATTTGCTTTTAGGAGTTTTCTTGGAATCCAAACAGTATCAGGTCAACTGAGTGATGGAGATTTT

mRNA sequence

AAAGACTACTCGCCGATGGCCAGAGATATCCTTCCCTTCGAATTCGGGGGCGGCGGCGCGGGCGAGAGCGAGCGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGTTTACACGGAGGAAACAGTCCGATTCATCGAAACAGAATCCGCCAAGAAAGCTCTCAGAAAGAGAAGCAGAAGAAAGCTAGAACCCTTCAATTGCTTTGAGTTCTTGAAAATCGTTTGGTGTTTCAAATTCTAACTAACTCTCTTGATTCTCTCTTATTTTTCCTCTTTGTGGATCGAATCAAATGATTCCTGATCCTTTTCTTGTGCTTCCCTCGATCTCGATGCTCATTCATCGGAATTTTCCGAGCGAGGATATTTTGTAATTAGAAATTAATTAGAAATTTTGATTCCTGTATATACTTGAATTGCTTAGAAAGCTTCAGAATGTATATAAAATATCTTCTTGTTATTATTGTTGCAATTTCAATTCCAATTCCAATTTGCTTTTAGGAGTTTTCTTGGAATCCAAACAGTATCAGGTCAACTGAGTGATGGAGATTTT

Coding sequence (CDS)

ATGGCCAGAGATATCCTTCCCTTCGAATTCGGGGgCGGCGGCGCGGGCGAGAGCGAGCGCGGCGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGATGGAGTTTACACGGAGGAAACAGTCCGATTCATCGAAACAGAATCCGCCAAGAAAGCTCTCAGAAAGAGAAGCAGAAGAAAGCTAGAACCCTTCAATTGCTTTGAGTTCTTGAAAATCGTTTGGTGTTTCAAATTCTAA

Protein sequence

MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKRSRRKLEPFNCFEFLKIVWCFKF*
Homology
[Close]
BLAST of Cucsa.251690 vs. TrEMBL
Match: A0A0A0L658_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G175640 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.4e-41
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SRRKLEPFNCFEFLKIVWCFKF 83
          SRRKLEPFNCFEFLKIVWCFKF
Sbjct: 61 SRRKLEPFNCFEFLKIVWCFKF 82

[Close]
BLAST of Cucsa.251690 vs. NCBI nr
Match: gi|700202130|gb|KGN57263.1| (hypothetical protein Csa_3G175640 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 3.5e-41
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1 

Query: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60
          MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR
Sbjct: 1  MARDILPFEFGGGGAGESERGGDIFFGKDDMKEYAWDGVYTEETVRFIETESAKKALRKR 60

Query: 61 SRRKLEPFNCFEFLKIVWCFKF 83
          SRRKLEPFNCFEFLKIVWCFKF
Sbjct: 61 SRRKLEPFNCFEFLKIVWCFKF 82

The following BLAST results are available for this feature:
BLAST of Cucsa.251690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L658_CUCSA2.4e-41100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G175640 PE=4 SV=1[more]
BLAST of Cucsa.251690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202130|gb|KGN57263.1|3.5e-41100.00hypothetical protein Csa_3G175640 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.251690.1Cucsa.251690.1mRNA