MELO3C020277 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020277
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Calcium binding protein
Location	chr6 : 13911583 .. 13912034 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAGGGAAGAAAGAAAGAGAAATAAAAAAAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTGATTGCCCTAAGTTCCAGATCAATTATCCCTATCAGAATTAGCTGCACAAAAATGGCAGATAGTGGCGTAAACTCAGCCGATTGCGAGAGAATTTTCAAACGATTCGATGCCAATGGCGACGGCAAGATCTCGGCAACAGAGCTGGGCGATGCTTTGAACGGGTTCGGAGTTAGTTCCGAGGATGCCAAGAGGATGATGGACGCCATTGACAAAGATGGCGATGGCTATATTTCCTTCCAAGAATTCTCCGATTTCGCTAAGGATAATCGCGCTTTGATGAAGGATTTCGCCAAGGCGTTTTAGATTTTGTTGTTATTGTTTTTGTTTTTGTTTTTTTTTTTGTTTTGTTTTGTTTTAATGGAAGATCTGATTATATGAATA

mRNA sequence

GAAGAAGGGAAGAAAGAAAGAGAAATAAAAAAAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTGATTGCCCTAAGTTCCAGATCAATTATCCCTATCAGAATTAGCTGCACAAAAATGGCAGATAGTGGCGTAAACTCAGCCGATTGCGAGAGAATTTTCAAACGATTCGATGCCAATGGCGACGGCAAGATCTCGGCAACAGAGCTGGGCGATGCTTTGAACGGGTTCGGAGTTAGTTCCGAGGATGCCAAGAGGATGATGGACGCCATTGACAAAGATGGCGATGGCTATATTTCCTTCCAAGAATTCTCCGATTTCGCTAAGGATAATCGCGCTTTGATGAAGGATTTCGCCAAGGCGTTTTAGATTTTGTTGTTATTGTTTTTGTTTTTGTTTTTTTTTTTGTTTTGTTTTGTTTTAATGGAAGATCTGATTATATGAATA

Coding sequence (CDS)

ATGGCAGATAGTGGCGTAAACTCAGCCGATTGCGAGAGAATTTTCAAACGATTCGATGCCAATGGCGACGGCAAGATCTCGGCAACAGAGCTGGGCGATGCTTTGAACGGGTTCGGAGTTAGTTCCGAGGATGCCAAGAGGATGATGGACGCCATTGACAAAGATGGCGATGGCTATATTTCCTTCCAAGAATTCTCCGATTTCGCTAAGGATAATCGCGCTTTGATGAAGGATTTCGCCAAGGCGTTTTAG

Protein sequence

MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYISFQEFSDFAKDNRALMKDFAKAF*

Homology

[Close]

BLAST of MELO3C020277 vs. Swiss-Prot
Match: POLC2_BRANA (Polcalcin Bra n 2 OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.4e-23
Identity = 57/84 (67.86%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA+ELGDAL   G V+ +D KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS+QEFSDFA  NR LMKD AK F
Sbjct: 61 ISYQEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of MELO3C020277 vs. Swiss-Prot
Match: POLC2_BRACM (Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.4e-23
Identity = 57/84 (67.86%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA+ELGDAL   G V+ +D KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS+QEFSDFA  NR LMKD AK F
Sbjct: 61 ISYQEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of MELO3C020277 vs. Swiss-Prot
Match: CML28_ARATH (Probable calcium-binding protein CML28 OS=Arabidopsis thaliana GN=CML28 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.3e-22
Identity = 57/84 (67.86%), Postives = 61/84 (72.62%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS+QEF DFA  NR LMKD AK F
Sbjct: 61 ISYQEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of MELO3C020277 vs. Swiss-Prot
Match: POLC3_CHEAL (Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-20
Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 1


Query: 3  DSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYIS 62
          D+  + AD ERIFKRFD NGDGKIS++ELGDAL   G V+ ++ +RMM  ID DGDG+IS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFIS 64

Query: 63 FQEFSDFAKDNRALMKDFAKAF 84
          F EF+DFA+ NR L+KD +K F
Sbjct: 65 FDEFTDFARANRGLVKDVSKIF 86

[Close]

BLAST of MELO3C020277 vs. Swiss-Prot
Match: POLC4_BETPN (Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-20
Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = 1


Query: 3  DSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGYIS 62
          D   + A+ ERIFKRFDANGDGKISA ELG+AL   G ++ ++ K MM  ID DGDG+IS
Sbjct: 4  DHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDGFIS 63

Query: 63 FQEFSDFAKDNRALMKDFAKAF 84
          FQEF+DF + NR L+KD AK F
Sbjct: 64 FQEFTDFGRANRGLLKDVAKIF 85

[Close]

BLAST of MELO3C020277 vs. TrEMBL
Match: A0A0A0L775_CUCSA (Putative calcium-binding protein CML28 OS=Cucumis sativus GN=Csa_3G345360 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.4e-36
Identity = 80/83 (96.39%), Postives = 80/83 (96.39%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYI 60
          MADSGVNSAD ERIFKRFDANGDGKISATELGDALN FGVSSEDAKRMMDAIDKDGDGYI
Sbjct: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SFQEFSDFAKDNRALMKDFAKAF 84
          SFQEF DFAKDNRALMKDFAKAF
Sbjct: 61 SFQEFFDFAKDNRALMKDFAKAF 83

[Close]

BLAST of MELO3C020277 vs. TrEMBL
Match: D7L0H4_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_896345 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-21
Identity = 58/84 (69.05%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS+QEFSDFA  NR LMKD AK F
Sbjct: 61 ISYQEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of MELO3C020277 vs. TrEMBL
Match: R0GAJ1_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10015861mg PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-21
Identity = 58/84 (69.05%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFKRFDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKRFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS++EFSDFA  NR LMKD AK F
Sbjct: 61 ISYEEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of MELO3C020277 vs. TrEMBL
Match: A0A078DRY1_BRANA (BnaC03g33420D protein OS=Brassica napus GN=BnaC03g33420D PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.9e-21
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA+ELGDAL   G V+ +D KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS+QEFSDFA  NR LMKD AK F
Sbjct: 61 ISYQEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of MELO3C020277 vs. TrEMBL
Match: A0A0B2S5H4_GLYSO (Polcalcin Nic t 1 OS=Glycine soja GN=glysoja_016839 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.9e-21
Identity = 54/84 (64.29%), Postives = 67/84 (79.76%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MA+   + AD ERIFKRFDANGDG+IS+ ELG+AL   G V++E+ KRMM+ ID DGDGY
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVKRMMEEIDTDGDGY 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS+QEF++FAK NR L+KD AK F
Sbjct: 61 ISYQEFTEFAKANRGLVKDVAKIF 84

[Close]

BLAST of MELO3C020277 vs. TAIR10
Match: AT3G03430.1 (AT3G03430.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 106.7 bits (265), Expect = 7.1e-24
Identity = 57/84 (67.86%), Postives = 61/84 (72.62%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS+QEF DFA  NR LMKD AK F
Sbjct: 61 ISYQEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of MELO3C020277 vs. TAIR10
Match: AT5G17480.1 (AT5G17480.1 pollen calcium-binding protein 1)

HSP 1 Score: 98.2 bits (243), Expect = 2.5e-21
Identity = 53/84 (63.10%), Postives = 61/84 (72.62%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA EL +AL   G V+++D KRMM  ID DGDG 
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGN 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS+QEF+DFA  NR LMKD AK F
Sbjct: 61 ISYQEFTDFAGANRGLMKDVAKIF 83

[Close]

BLAST of MELO3C020277 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 62.0 bits (149), Expect = 2.0e-10
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 1


Query: 10  DCERIFKRFDANGDGKISATELGDALNGFG--VSSEDAKRMMDAIDKDGDGYISFQEFSD 69
           + E +FK+FD NGDGKIS+ ELG  +   G  V  E+ ++ +  ID+ GDGYI+F+EF +
Sbjct: 37  ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVE 96

Query: 70  F---AKDNRALMKDFAKAF 84
                 D   ++++   AF
Sbjct: 97  LNTKGMDQNDVLENLKDAF 115

HSP 2 Score: 47.8 bits (112), Expect = 3.9e-06
Identity = 23/53 (43.40%), Postives = 31/53 (58.49%), Query Frame = 1


Query: 15  FKRFDANGDGKISATELGDALNGFG--VSSEDAKRMMDAIDKDGDGYISFQEF 66
           F  +D +G+G ISA EL + L   G   S  + ++M+  +DKDGDG I F+EF
Sbjct: 115 FSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDGTIDFEEF 167

[Close]

BLAST of MELO3C020277 vs. TAIR10
Match: AT1G73630.1 (AT1G73630.1 EF hand calcium-binding protein family)

HSP 1 Score: 60.1 bits (144), Expect = 7.7e-10
Identity = 27/70 (38.57%), Postives = 44/70 (62.86%), Query Frame = 1


Query: 10 DCERIFKRFDANGDGKISATELGDALNGFGVS--SEDAKRMMDAIDKDGDGYISFQEFSD 69
          + +++F +FDANGDGKIS +ELG+     G S   E+  R++D ID D DG+I+ +EF+ 
Sbjct: 20 ELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFAT 79

Query: 70 FAKDNRALMK 78
            + + + ++
Sbjct: 80 ICRSSSSAVE 89

[Close]

BLAST of MELO3C020277 vs. TAIR10
Match: AT3G07490.1 (AT3G07490.1 ARF-GAP domain 11)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-09
Identity = 31/83 (37.35%), Postives = 47/83 (56.63%), Query Frame = 1


Query: 6  VNSADCERIFKRFDANGDGKISATELGDALNGFG--VSSEDAKRMMDAIDKDGDGYISFQ 65
          ++ A+  RIF+ FD NGDGKI+  EL D+L   G  +  +D  +M++ ID +GDGY+  +
Sbjct: 1  MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 66 EFSDFAK---DNRALMKDFAKAF 84
          EF    +   + R   +D  +AF
Sbjct: 61 EFGGLYQTIMEERDEEEDMREAF 83

HSP 2 Score: 50.1 bits (118), Expect = 7.9e-07
Identity = 26/65 (40.00%), Postives = 31/65 (47.69%), Query Frame = 1


Query: 10  DCERIFKRFDANGDGKISATELGDALNGFGVSS----EDAKRMMDAIDKDGDGYISFQEF 69
           D    F  FD N DG I+  EL   L   G+      ED KRM+  +D DGDG ++F+EF
Sbjct: 78  DMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDGDGMVNFKEF 137

Query: 70  SDFAK 71
               K
Sbjct: 138 KQMMK 142

[Close]

BLAST of MELO3C020277 vs. NCBI nr
Match: gi|659114464|ref|XP_008457063.1| (PREDICTED: polcalcin Bra n 2-like [Cucumis melo])

HSP 1 Score: 169.1 bits (427), Expect = 3.3e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYI 60
          MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYI
Sbjct: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SFQEFSDFAKDNRALMKDFAKAF 84
          SFQEFSDFAKDNRALMKDFAKAF
Sbjct: 61 SFQEFSDFAKDNRALMKDFAKAF 83

[Close]

BLAST of MELO3C020277 vs. NCBI nr
Match: gi|449464146|ref|XP_004149790.1| (PREDICTED: probable calcium-binding protein CML28 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-36
Identity = 80/83 (96.39%), Postives = 80/83 (96.39%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYI 60
          MADSGVNSAD ERIFKRFDANGDGKISATELGDALN FGVSSEDAKRMMDAIDKDGDGYI
Sbjct: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SFQEFSDFAKDNRALMKDFAKAF 84
          SFQEF DFAKDNRALMKDFAKAF
Sbjct: 61 SFQEFFDFAKDNRALMKDFAKAF 83

[Close]

BLAST of MELO3C020277 vs. NCBI nr
Match: gi|565484066|ref|XP_006299673.1| (hypothetical protein CARUB_v10015861mg [Capsella rubella])

HSP 1 Score: 109.0 bits (271), Expect = 4.1e-21
Identity = 58/84 (69.05%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFKRFDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKRFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS++EFSDFA  NR LMKD AK F
Sbjct: 61 ISYEEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of MELO3C020277 vs. NCBI nr
Match: gi|297828822|ref|XP_002882293.1| (hypothetical protein ARALYDRAFT_896345 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 109.0 bits (271), Expect = 4.1e-21
Identity = 58/84 (69.05%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS+QEFSDFA  NR LMKD AK F
Sbjct: 61 ISYQEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of MELO3C020277 vs. NCBI nr
Match: gi|59800145|sp|P69198.1|POLC2_BRANA (RecName: Full=Polcalcin Bra n 2; AltName: Full=Calcium-binding pollen allergen Bra n 2; AltName: Allergen=Bra n 2)

HSP 1 Score: 108.2 bits (269), Expect = 7.0e-21
Identity = 57/84 (67.86%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA+ELGDAL   G V+ +D KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFSDFAKDNRALMKDFAKAF 84
          IS+QEFSDFA  NR LMKD AK F
Sbjct: 61 ISYQEFSDFASANRGLMKDVAKIF 83

The following BLAST results are available for this feature:

BLAST of MELO3C020277 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLC2_BRANA	4.4e-23	67.86	Polcalcin Bra n 2 OS=Brassica napus PE=1 SV=1	[more]
POLC2_BRACM	4.4e-23	67.86	Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1	[more]
CML28_ARATH	1.3e-22	67.86	Probable calcium-binding protein CML28 OS=Arabidopsis thaliana GN=CML28 PE=3 SV=...	[more]
POLC3_CHEAL	1.2e-20	60.98	Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1	[more]
POLC4_BETPN	1.2e-20	60.98	Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1	[more]

BLAST of MELO3C020277 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L775_CUCSA	1.4e-36	96.39	Putative calcium-binding protein CML28 OS=Cucumis sativus GN=Csa_3G345360 PE=4 S...	[more]
D7L0H4_ARALL	2.8e-21	69.05	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
R0GAJ1_9BRAS	2.8e-21	69.05	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10015861mg PE=4 SV=1	[more]
A0A078DRY1_BRANA	4.9e-21	67.86	BnaC03g33420D protein OS=Brassica napus GN=BnaC03g33420D PE=4 SV=1	[more]
A0A0B2S5H4_GLYSO	4.9e-21	64.29	Polcalcin Nic t 1 OS=Glycine soja GN=glysoja_016839 PE=4 SV=1	[more]

BLAST of MELO3C020277 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03430.1	7.1e-24	67.86	Calcium-binding EF-hand family protein	[more]
AT5G17480.1	2.5e-21	63.10	pollen calcium-binding protein 1	[more]
AT1G24620.1	2.0e-10	39.24	EF hand calcium-binding protein family	[more]
AT1G73630.1	7.7e-10	38.57	EF hand calcium-binding protein family	[more]
AT3G07490.1	1.3e-09	37.35	ARF-GAP domain 11	[more]

BLAST of MELO3C020277 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114464\|ref\|XP_008457063.1\|	3.3e-39	100.00	PREDICTED: polcalcin Bra n 2-like [Cucumis melo]	[more]
gi\|449464146\|ref\|XP_004149790.1\|	2.0e-36	96.39	PREDICTED: probable calcium-binding protein CML28 [Cucumis sativus]	[more]
gi\|565484066\|ref\|XP_006299673.1\|	4.1e-21	69.05	hypothetical protein CARUB_v10015861mg [Capsella rubella]	[more]
gi\|297828822\|ref\|XP_002882293.1\|	4.1e-21	69.05	hypothetical protein ARALYDRAFT_896345 [Arabidopsis lyrata subsp. lyrata]	[more]
gi\|59800145\|sp\|P69198.1\|POLC2_BRANA	7.0e-21	67.86	RecName: Full=Polcalcin Bra n 2; AltName: Full=Calcium-binding pollen allergen B...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0044464	cell part
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020277T1	MELO3C020277T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 11..69 score: 1.5
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 44..72 score: 4.9E-5coord: 10..38 score: 0.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 6..41 score: 15.127coord: 43..75 score: 13
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 8..76 score: 1.4
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 9..69 score: 5.89
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 19..31 score: -coord: 53..65 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 12..83 score: 2.4
None	No IPR available	PANTHER	PTHR10891:SF605	CALCIUM-BINDING PROTEIN CML25-RELATED	coord: 12..83 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C020277	Csa3G345360	Cucumber (Chinese Long) v2	cumeB246
MELO3C020277	Cla013179	Watermelon (97103) v1	mewmB461
MELO3C020277	ClCG05G011030	Watermelon (Charleston Gray)	mewcgB427
MELO3C020277	Bhi01G001354	Wax gourd	mewgoB530
MELO3C020277	CSPI03G21770	Wild cucumber (PI 183967)	cpimeB243
MELO3C020277	Cucsa.012590	Cucumber (Gy14) v1	cgymeB343
MELO3C020277	CmaCh14G008490	Cucurbita maxima (Rimu)	cmameB243
MELO3C020277	CmaCh01G003590	Cucurbita maxima (Rimu)	cmameB431
MELO3C020277	CmoCh01G003750	Cucurbita moschata (Rifu)	cmomeB421
MELO3C020277	CmoCh14G008630	Cucurbita moschata (Rifu)	cmomeB231
MELO3C020277	Lsi05G003120	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C020277	Cp4.1LG03g05820	Cucurbita pepo (Zucchini)	cpemeB586
MELO3C020277	Cp4.1LG02g16720	Cucurbita pepo (Zucchini)	cpemeB529
MELO3C020277	CsGy3G020960	Cucumber (Gy14) v2	cgybmeB212
MELO3C020277	Carg24222	Silver-seed gourd	carmeB0181
MELO3C020277	Carg07447	Silver-seed gourd	carmeB0756
MELO3C020277	CsaV3_3G021560	Cucumber (Chinese Long) v3	cucmeB249

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020277	Watermelon (97103) v2	mewmbB434