Csa3G345360 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G345360
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Calcium binding protein; contains IPR011992 (EF-hand-like domain)
Location	Chr3 : 18003747 .. 18004292 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAGAGAAGAAAGAAAGAGCAAAAAAAAAAAAAAAAAAGTGTGATTGCCCTAAGTTCAAGATCAATTATCCATTTCAGAATTAGCTGCACAAAAATGGCAGACAGTGGCGTAAACTCAGCCGATTTGGAGAGAATTTTCAAACGATTCGATGCCAATGGCGATGGCAAGATCTCGGCAACAGAGCTGGGAGATGCTTTGAACGAGTTCGGAGTTAGTTCCGAGGATGCCAAGAGGATGATGGACGCCATTGACAAAGATGGTGATGGCTACATTTCCTTCCAAGAATTCTTTGATTTCGCTAAGGATAATCGCGCTTTGATGAAGGATTTCGCCAAGGCGTTTTAGATTTTTTTATTTTAATGGAAGGATCTGATTATATGAATATGGTTACCGTGAAGGAGACGCTTCTTCTTCCTTTTGTTTTTTCTTTCTTTTGTACCACACACACACATATATAAACATAACATATACTGTGCTTCTCTTCATGAACGTTATAAATGTTATATTTTTCGATTAAGTTTCATTTTCATTTCTAAACTTTA

mRNA sequence

ATGGCAGACAGTGGCGTAAACTCAGCCGATTTGGAGAGAATTTTCAAACGATTCGATGCCAATGGCGATGGCAAGATCTCGGCAACAGAGCTGGGAGATGCTTTGAACGAGTTCGGAGTTAGTTCCGAGGATGCCAAGAGGATGATGGACGCCATTGACAAAGATGGTGATGGCTACATTTCCTTCCAAGAATTCTTTGATTTCGCTAAGGATAATCGCGCTTTGATGAAGGATTTCGCCAAGGCGTTTTAG

Coding sequence (CDS)

ATGGCAGACAGTGGCGTAAACTCAGCCGATTTGGAGAGAATTTTCAAACGATTCGATGCCAATGGCGATGGCAAGATCTCGGCAACAGAGCTGGGAGATGCTTTGAACGAGTTCGGAGTTAGTTCCGAGGATGCCAAGAGGATGATGGACGCCATTGACAAAGATGGTGATGGCTACATTTCCTTCCAAGAATTCTTTGATTTCGCTAAGGATAATCGCGCTTTGATGAAGGATTTCGCCAAGGCGTTTTAG

Protein sequence

MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYISFQEFFDFAKDNRALMKDFAKAF*

Homology

[Close]

BLAST of Csa3G345360 vs. Swiss-Prot
Match: CML28_ARATH (Probable calcium-binding protein CML28 OS=Arabidopsis thaliana GN=CML28 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 7.4e-23
Identity = 57/84 (67.86%), Postives = 61/84 (72.62%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF DFA  NR LMKD AK F
Sbjct: 61 ISYQEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of Csa3G345360 vs. Swiss-Prot
Match: POLC2_BRACM (Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-22
Identity = 56/84 (66.67%), Postives = 62/84 (73.81%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA+ELGDAL   G V+ +D KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF DFA  NR LMKD AK F
Sbjct: 61 ISYQEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of Csa3G345360 vs. Swiss-Prot
Match: POLC2_BRANA (Polcalcin Bra n 2 OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-22
Identity = 56/84 (66.67%), Postives = 62/84 (73.81%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA+ELGDAL   G V+ +D KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF DFA  NR LMKD AK F
Sbjct: 61 ISYQEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of Csa3G345360 vs. Swiss-Prot
Match: POLC3_CHEAL (Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-20
Identity = 50/82 (60.98%), Postives = 60/82 (73.17%), Query Frame = 1


Query: 3  DSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGYIS 62
          D+  + AD ERIFKRFD NGDGKIS++ELGDAL   G V+ ++ +RMM  ID DGDG+IS
Sbjct: 5  DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFIS 64

Query: 63 FQEFFDFAKDNRALMKDFAKAF 84
          F EF DFA+ NR L+KD +K F
Sbjct: 65 FDEFTDFARANRGLVKDVSKIF 86

[Close]

BLAST of Csa3G345360 vs. Swiss-Prot
Match: POLC4_BETPN (Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.6e-20
Identity = 50/82 (60.98%), Postives = 58/82 (70.73%), Query Frame = 1


Query: 3  DSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGYIS 62
          D   + A+ ERIFKRFDANGDGKISA ELG+AL   G ++ ++ K MM  ID DGDG+IS
Sbjct: 4  DHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDGFIS 63

Query: 63 FQEFFDFAKDNRALMKDFAKAF 84
          FQEF DF + NR L+KD AK F
Sbjct: 64 FQEFTDFGRANRGLLKDVAKIF 85

[Close]

BLAST of Csa3G345360 vs. TrEMBL
Match: A0A0A0L775_CUCSA (Putative calcium-binding protein CML28 OS=Cucumis sativus GN=Csa_3G345360 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 6.7e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI 60
          MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI
Sbjct: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SFQEFFDFAKDNRALMKDFAKAF 84
          SFQEFFDFAKDNRALMKDFAKAF
Sbjct: 61 SFQEFFDFAKDNRALMKDFAKAF 83

[Close]

BLAST of Csa3G345360 vs. TrEMBL
Match: A0A067KMY8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.3e-21
Identity = 56/84 (66.67%), Postives = 61/84 (72.62%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD   + AD ERIFKRFD NGDGKISA ELGD L   G V+ ++ KRMM  ID DGDGY
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF DFA  NR LMKD AK F
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]

BLAST of Csa3G345360 vs. TrEMBL
Match: A0A0B2S5H4_GLYSO (Polcalcin Nic t 1 OS=Glycine soja GN=glysoja_016839 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-20
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MA+   + AD ERIFKRFDANGDG+IS+ ELG+AL   G V++E+ KRMM+ ID DGDGY
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVKRMMEEIDTDGDGY 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF +FAK NR L+KD AK F
Sbjct: 61 ISYQEFTEFAKANRGLVKDVAKIF 84

[Close]

BLAST of Csa3G345360 vs. TrEMBL
Match: I1MBX4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G216000 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-20
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MA+   + AD ERIFKRFDANGDG+IS+ ELG+AL   G V++E+ KRMM+ ID DGDGY
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVKRMMEEIDTDGDGY 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF +FAK NR L+KD AK F
Sbjct: 61 ISYQEFTEFAKANRGLVKDVAKIF 84

[Close]

BLAST of Csa3G345360 vs. TrEMBL
Match: D7L0H4_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_896345 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-20
Identity = 57/84 (67.86%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF DFA  NR LMKD AK F
Sbjct: 61 ISYQEFSDFASANRGLMKDVAKIF 83

[Close]

BLAST of Csa3G345360 vs. TAIR10
Match: AT3G03430.1 (AT3G03430.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 107.5 bits (267), Expect = 4.2e-24
Identity = 57/84 (67.86%), Postives = 61/84 (72.62%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF DFA  NR LMKD AK F
Sbjct: 61 ISYQEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of Csa3G345360 vs. TAIR10
Match: AT5G17480.1 (AT5G17480.1 pollen calcium-binding protein 1)

HSP 1 Score: 97.4 bits (241), Expect = 4.3e-21
Identity = 53/84 (63.10%), Postives = 60/84 (71.43%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA EL +AL   G V+++D KRMM  ID DGDG 
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGN 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF DFA  NR LMKD AK F
Sbjct: 61 ISYQEFTDFAGANRGLMKDVAKIF 83

[Close]

BLAST of Csa3G345360 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 64.3 bits (155), Expect = 4.1e-11
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 1


Query: 10  DLERIFKRFDANGDGKISATELGDALNEFG--VSSEDAKRMMDAIDKDGDGYISFQEFFD 69
           +LE +FK+FD NGDGKIS+ ELG  +   G  V  E+ ++ +  ID+ GDGYI+F+EF +
Sbjct: 37  ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVE 96

Query: 70  F---AKDNRALMKDFAKAF 84
                 D   ++++   AF
Sbjct: 97  LNTKGMDQNDVLENLKDAF 115

HSP 2 Score: 48.9 bits (115), Expect = 1.8e-06
Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 1


Query: 10  DLERIFKRFDANGDGKISATELGDALNEFG--VSSEDAKRMMDAIDKDGDGYISFQEF 66
           +L+  F  +D +G+G ISA EL + L   G   S  + ++M+  +DKDGDG I F+EF
Sbjct: 110 NLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDGTIDFEEF 167

[Close]

BLAST of Csa3G345360 vs. TAIR10
Match: AT3G07490.1 (AT3G07490.1 ARF-GAP domain 11)

HSP 1 Score: 61.6 bits (148), Expect = 2.6e-10
Identity = 32/83 (38.55%), Postives = 48/83 (57.83%), Query Frame = 1


Query: 6  VNSADLERIFKRFDANGDGKISATELGDALNEFG--VSSEDAKRMMDAIDKDGDGYISFQ 65
          ++ A+L RIF+ FD NGDGKI+  EL D+L   G  +  +D  +M++ ID +GDGY+  +
Sbjct: 1  MDQAELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIE 60

Query: 66 EF---FDFAKDNRALMKDFAKAF 84
          EF   +    + R   +D  +AF
Sbjct: 61 EFGGLYQTIMEERDEEEDMREAF 83

HSP 2 Score: 50.1 bits (118), Expect = 7.9e-07
Identity = 26/65 (40.00%), Postives = 32/65 (49.23%), Query Frame = 1


Query: 10  DLERIFKRFDANGDGKISATELGDALNEFGVSS----EDAKRMMDAIDKDGDGYISFQEF 69
           D+   F  FD N DG I+  EL   L   G+      ED KRM+  +D DGDG ++F+EF
Sbjct: 78  DMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDGDGMVNFKEF 137

Query: 70  FDFAK 71
               K
Sbjct: 138 KQMMK 142

[Close]

BLAST of Csa3G345360 vs. TAIR10
Match: AT2G15680.1 (AT2G15680.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 61.2 bits (147), Expect = 3.4e-10
Identity = 31/70 (44.29%), Postives = 39/70 (55.71%), Query Frame = 1


Query: 5   GVNSADLERIFKRFDANGDGKISATELGDALNEFG--VSSEDAKRMMDAIDKDGDGYISF 64
           G+ S+D+   F  FD NGDGKISA E+   L + G   S ED  RM+ A+D DGDG ++ 
Sbjct: 116 GIRSSDIRNSFWTFDLNGDGKISAEEVMSVLWKLGERCSLEDCNRMVRAVDADGDGLVNM 175

Query: 65  QEFFDFAKDN 73
           +EF      N
Sbjct: 176 EEFIKMMSSN 185

HSP 2 Score: 55.8 bits (133), Expect = 1.4e-08
Identity = 28/63 (44.44%), Postives = 35/63 (55.56%), Query Frame = 1


Query: 10  DLERIFKRFDANGDGKISATELGDALNEFGVSS--EDAKRMMDAIDKDGDGYISFQEFFD 69
           ++ R+F RFD + DGKIS TE    L   G     ED  ++  A+D DGDG+I F+EF D
Sbjct: 50  EMRRVFSRFDLDKDGKISQTEYKVVLRALGQERAIEDVPKIFKAVDLDGDGFIDFREFID 109

Query: 70  FAK 71
             K
Sbjct: 110 AYK 112

HSP 3 Score: 38.1 bits (87), Expect = 3.1e-03
Identity = 22/56 (39.29%), Postives = 27/56 (48.21%), Query Frame = 1


Query: 10  DLERIFKRFDANGDGKISATELGDALNEF-GVSSEDAKRMMDAIDKDGDGYISFQE 65
           D+ +IFK  D +GDG I   E  DA     G+ S D +      D +GDG IS +E
Sbjct: 86  DVPKIFKAVDLDGDGFIDFREFIDAYKRSGGIRSSDIRNSFWTFDLNGDGKISAEE 141

[Close]

BLAST of Csa3G345360 vs. NCBI nr
Match: gi|449464146|ref|XP_004149790.1| (PREDICTED: probable calcium-binding protein CML28 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 9.7e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI 60
          MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI
Sbjct: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SFQEFFDFAKDNRALMKDFAKAF 84
          SFQEFFDFAKDNRALMKDFAKAF
Sbjct: 61 SFQEFFDFAKDNRALMKDFAKAF 83

[Close]

BLAST of Csa3G345360 vs. NCBI nr
Match: gi|659114464|ref|XP_008457063.1| (PREDICTED: polcalcin Bra n 2-like [Cucumis melo])

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-36
Identity = 80/83 (96.39%), Postives = 80/83 (96.39%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI 60
          MADSGVNSAD ERIFKRFDANGDGKISATELGDALN FGVSSEDAKRMMDAIDKDGDGYI
Sbjct: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SFQEFFDFAKDNRALMKDFAKAF 84
          SFQEF DFAKDNRALMKDFAKAF
Sbjct: 61 SFQEFSDFAKDNRALMKDFAKAF 83

[Close]

BLAST of Csa3G345360 vs. NCBI nr
Match: gi|802634001|ref|XP_012077783.1| (PREDICTED: polcalcin Che a 3-like [Jatropha curcas])

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-20
Identity = 56/84 (66.67%), Postives = 61/84 (72.62%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD   + AD ERIFKRFD NGDGKISA ELGD L   G V+ ++ KRMM  ID DGDGY
Sbjct: 1  MADDAQDLADRERIFKRFDLNGDGKISAAELGDCLKTLGSVTPDEVKRMMAEIDTDGDGY 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF DFA  NR LMKD AK F
Sbjct: 61 ISYQEFTDFATANRGLMKDVAKIF 84

[Close]

BLAST of Csa3G345360 vs. NCBI nr
Match: gi|15228551|ref|NP_186993.1| (putative calcium-binding protein CML28 [Arabidopsis thaliana])

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-20
Identity = 57/84 (67.86%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MAD+    A+ +RIFK+FDANGDGKISA ELGDAL   G V+ ED KRMM  ID DGDGY
Sbjct: 1  MADA-TEKAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGY 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF DFA  NR LMKD AK F
Sbjct: 61 ISYQEFIDFASANRGLMKDVAKIF 83

[Close]

BLAST of Csa3G345360 vs. NCBI nr
Match: gi|356553301|ref|XP_003544995.1| (PREDICTED: polcalcin Nic t 1 [Glycine max])

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-20
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 1


Query: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFG-VSSEDAKRMMDAIDKDGDGY 60
          MA+   + AD ERIFKRFDANGDG+IS+ ELG+AL   G V++E+ KRMM+ ID DGDGY
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVKRMMEEIDTDGDGY 60

Query: 61 ISFQEFFDFAKDNRALMKDFAKAF 84
          IS+QEF +FAK NR L+KD AK F
Sbjct: 61 ISYQEFTEFAKANRGLVKDVAKIF 84

The following BLAST results are available for this feature:

BLAST of Csa3G345360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CML28_ARATH	7.4e-23	67.86	Probable calcium-binding protein CML28 OS=Arabidopsis thaliana GN=CML28 PE=3 SV=...	[more]
POLC2_BRACM	2.2e-22	66.67	Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1	[more]
POLC2_BRANA	2.2e-22	66.67	Polcalcin Bra n 2 OS=Brassica napus PE=1 SV=1	[more]
POLC3_CHEAL	1.6e-20	60.98	Polcalcin Che a 3 OS=Chenopodium album PE=1 SV=1	[more]
POLC4_BETPN	1.6e-20	60.98	Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1	[more]

BLAST of Csa3G345360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L775_CUCSA	6.7e-39	100.00	Putative calcium-binding protein CML28 OS=Cucumis sativus GN=Csa_3G345360 PE=4 S...	[more]
A0A067KMY8_JATCU	8.3e-21	66.67	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13424 PE=4 SV=1	[more]
A0A0B2S5H4_GLYSO	1.1e-20	64.29	Polcalcin Nic t 1 OS=Glycine soja GN=glysoja_016839 PE=4 SV=1	[more]
I1MBX4_SOYBN	1.1e-20	64.29	Uncharacterized protein OS=Glycine max GN=GLYMA_14G216000 PE=4 SV=1	[more]
D7L0H4_ARALL	1.4e-20	67.86	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]

BLAST of Csa3G345360 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03430.1	4.2e-24	67.86	Calcium-binding EF-hand family protein	[more]
AT5G17480.1	4.3e-21	63.10	pollen calcium-binding protein 1	[more]
AT1G24620.1	4.1e-11	40.51	EF hand calcium-binding protein family	[more]
AT3G07490.1	2.6e-10	38.55	ARF-GAP domain 11	[more]
AT2G15680.1	3.4e-10	44.29	Calcium-binding EF-hand family protein	[more]

BLAST of Csa3G345360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464146\|ref\|XP_004149790.1\|	9.7e-39	100.00	PREDICTED: probable calcium-binding protein CML28 [Cucumis sativus]	[more]
gi\|659114464\|ref\|XP_008457063.1\|	2.0e-36	96.39	PREDICTED: polcalcin Bra n 2-like [Cucumis melo]	[more]
gi\|802634001\|ref\|XP_012077783.1\|	1.2e-20	66.67	PREDICTED: polcalcin Che a 3-like [Jatropha curcas]	[more]
gi\|15228551\|ref\|NP_186993.1\|	1.2e-20	67.86	putative calcium-binding protein CML28 [Arabidopsis thaliana]	[more]
gi\|356553301\|ref\|XP_003544995.1\|	1.6e-20	64.29	PREDICTED: polcalcin Nic t 1 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0044464	cell part
molecular_function	GO:0005509	calcium ion binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU091183	cucumber EST collection version 3.0	transcribed_cluster
CU099056	cucumber EST collection version 3.0	transcribed_cluster
CU104756	cucumber EST collection version 3.0	transcribed_cluster
CU107090	cucumber EST collection version 3.0	transcribed_cluster
CU150673	cucumber EST collection version 3.0	transcribed_cluster
CU152966	cucumber EST collection version 3.0	transcribed_cluster
CU167112	cucumber EST collection version 3.0	transcribed_cluster
CU171237	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G345360.1	Csa3G345360.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU104756	CU104756	transcribed_cluster
CU150673	CU150673	transcribed_cluster
CU167112	CU167112	transcribed_cluster
CU152966	CU152966	transcribed_cluster
CU091183	CU091183	transcribed_cluster
CU107090	CU107090	transcribed_cluster
CU099056	CU099056	transcribed_cluster
CU171237	CU171237	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 10..69 score: 1.6
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 44..72 score: 1.2E-4coord: 10..38 score: 9.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 43..75 score: 12.784coord: 6..41 score: 15
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 7..76 score: 5.3
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 9..69 score: 1.2
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 53..65 score: -coord: 19..31 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 6..68 score: 4.5
None	No IPR available	PANTHER	PTHR10891:SF573	CALCIUM-BINDING PROTEIN CML24-RELATED	coord: 6..68 score: 4.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G345360	Cla013179	Watermelon (97103) v1	cuwmB245
Csa3G345360	MELO3C020277	Melon (DHL92) v3.5.1	cumeB246
Csa3G345360	ClCG05G011030	Watermelon (Charleston Gray)	cuwcgB233
Csa3G345360	Lsi05G003120	Bottle gourd (USVL1VR-Ls)	culsiB212
Csa3G345360	MELO3C020277.2	Melon (DHL92) v3.6.1	cumedB239
Csa3G345360	Bhi01G001354	Wax gourd	cuwgoB299
Csa3G345360	CSPI03G21770	Wild cucumber (PI 183967)	cpicuB120
Csa3G345360	Cucsa.012590	Cucumber (Gy14) v1	cgycuB290
Csa3G345360	CmaCh01G003590	Cucurbita maxima (Rimu)	cmacuB455
Csa3G345360	CmaCh14G008490	Cucurbita maxima (Rimu)	cmacuB242
Csa3G345360	CmoCh01G003750	Cucurbita moschata (Rifu)	cmocuB442
Csa3G345360	CmoCh14G008630	Cucurbita moschata (Rifu)	cmocuB229
Csa3G345360	Cp4.1LG02g16720	Cucurbita pepo (Zucchini)	cpecuB547
Csa3G345360	Cp4.1LG03g05820	Cucurbita pepo (Zucchini)	cpecuB600
Csa3G345360	CsGy3G020960	Cucumber (Gy14) v2	cgybcuB109
Csa3G345360	Carg07447	Silver-seed gourd	carcuB0780

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G345360	Watermelon (97103) v2	cuwmbB218