Cp4.1LG03g05820 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g05820
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCalcium-binding EF-hand family protein
LocationCp4.1LG03 : 4476043 .. 4476294 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGAGTGACGTGAGCGCAGCCGAGTGCGAGAGGATCTTCAAGCGATTCGACGCGAACGGCGACGGGATGATATCGGCGGCGGAGCTGGTCGATGCGTTGAACGGATTGGGAGTGAACGCGGAGGAGGCGAAGAGGATGATGGACGCGATTGACAAAGACGGCGATGGGTTCATATCGTTGGAAGAGTTCGCGGATTTCGCGAAGGATAATCGCGCGTTGATGAAAGATTTTGCAAAGGCGTTTTAA

mRNA sequence

ATGGCGGAGAGTGACGTGAGCGCAGCCGAGTGCGAGAGGATCTTCAAGCGATTCGACGCGAACGGCGACGGGATGATATCGGCGGCGGAGCTGGTCGATGCGTTGAACGGATTGGGAGTGAACGCGGAGGAGGCGAAGAGGATGATGGACGCGATTGACAAAGACGGCGATGGGTTCATATCGTTGGAAGAGTTCGCGGATTTCGCGAAGGATAATCGCGCGTTGATGAAAGATTTTGCAAAGGCGTTTTAA

Coding sequence (CDS)

ATGGCGGAGAGTGACGTGAGCGCAGCCGAGTGCGAGAGGATCTTCAAGCGATTCGACGCGAACGGCGACGGGATGATATCGGCGGCGGAGCTGGTCGATGCGTTGAACGGATTGGGAGTGAACGCGGAGGAGGCGAAGAGGATGATGGACGCGATTGACAAAGACGGCGATGGGTTCATATCGTTGGAAGAGTTCGCGGATTTCGCGAAGGATAATCGCGCGTTGATGAAAGATTTTGCAAAGGCGTTTTAA

Protein sequence

MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFISLEEFADFAKDNRALMKDFAKAF
Homology
[Close]
BLAST of Cp4.1LG03g05820 vs. Swiss-Prot
Match: CML28_ARATH (Probable calcium-binding protein CML28 OS=Arabidopsis thaliana GN=CML28 PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.9e-19
Identity = 52/76 (68.42%), Postives = 57/76 (75.00%), Query Frame = 1 

Query: 9  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFISLEEFAD 68
          AE +RIFK+FDANGDG ISAAEL DAL  LG V  E+ KRMM  ID DGDG+IS +EF D
Sbjct: 8  AEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISYQEFID 67

Query: 69 FAKDNRALMKDFAKAF 84
          FA  NR LMKD AK F
Sbjct: 68 FASANRGLMKDVAKIF 83

[Close]
BLAST of Cp4.1LG03g05820 vs. Swiss-Prot
Match: POLC4_BETPN (Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.4e-19
Identity = 50/76 (65.79%), Postives = 56/76 (73.68%), Query Frame = 1 

Query: 9  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFISLEEFAD 68
          AE ERIFKRFDANGDG ISAAEL +AL  LG +  +E K MM  ID DGDGFIS +EF D
Sbjct: 10 AERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDGFISFQEFTD 69

Query: 69 FAKDNRALMKDFAKAF 84
          F + NR L+KD AK F
Sbjct: 70 FGRANRGLLKDVAKIF 85

[Close]
BLAST of Cp4.1LG03g05820 vs. Swiss-Prot
Match: POLC2_BRANA (Polcalcin Bra n 2 OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.4e-19
Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 1 

Query: 9  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFISLEEFAD 68
          AE +RIFK+FDANGDG ISA+EL DAL  LG V  ++ KRMM  ID DGDG+IS +EF+D
Sbjct: 8  AEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGYISYQEFSD 67

Query: 69 FAKDNRALMKDFAKAF 84
          FA  NR LMKD AK F
Sbjct: 68 FASANRGLMKDVAKIF 83

[Close]
BLAST of Cp4.1LG03g05820 vs. Swiss-Prot
Match: POLC2_BRACM (Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.4e-19
Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 1 

Query: 9  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFISLEEFAD 68
          AE +RIFK+FDANGDG ISA+EL DAL  LG V  ++ KRMM  ID DGDG+IS +EF+D
Sbjct: 8  AEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGYISYQEFSD 67

Query: 69 FAKDNRALMKDFAKAF 84
          FA  NR LMKD AK F
Sbjct: 68 FASANRGLMKDVAKIF 83

[Close]
BLAST of Cp4.1LG03g05820 vs. Swiss-Prot
Match: ALL3_OLEEU (Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-18
Identity = 52/84 (61.90%), Postives = 59/84 (70.24%), Query Frame = 1 

Query: 1  MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MA+     AE ERIFKRFDANGDG IS++EL + L  LG V  EE +RMM  ID DGDGF
Sbjct: 1  MADDPQEVAEHERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGF 60

Query: 61 ISLEEFADFAKDNRALMKDFAKAF 84
          IS EEF  FA+ NR L+KD AK F
Sbjct: 61 ISFEEFTVFARANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG03g05820 vs. TrEMBL
Match: A0A0A0L775_CUCSA (Putative calcium-binding protein CML28 OS=Cucumis sativus GN=Csa_3G345360 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-27
Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = 1 

Query: 1  MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFI 60
          MA+S V++A+ ERIFKRFDANGDG ISA EL DALN  GV++E+AKRMMDAIDKDGDG+I
Sbjct: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SLEEFADFAKDNRALMKDFAKAF 84
          S +EF DFAKDNRALMKDFAKAF
Sbjct: 61 SFQEFFDFAKDNRALMKDFAKAF 83

[Close]
BLAST of Cp4.1LG03g05820 vs. TrEMBL
Match: A0A0B2S5H4_GLYSO (Polcalcin Nic t 1 OS=Glycine soja GN=glysoja_016839 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-19
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 1 

Query: 1  MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MAE     A+ ERIFKRFDANGDG IS+AEL +AL  LG V AEE KRMM+ ID DGDG+
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVKRMMEEIDTDGDGY 60

Query: 61 ISLEEFADFAKDNRALMKDFAKAF 84
          IS +EF +FAK NR L+KD AK F
Sbjct: 61 ISYQEFTEFAKANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG03g05820 vs. TrEMBL
Match: I1MBX4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G216000 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-19
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 1 

Query: 1  MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MAE     A+ ERIFKRFDANGDG IS+AEL +AL  LG V AEE KRMM+ ID DGDG+
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVKRMMEEIDTDGDGY 60

Query: 61 ISLEEFADFAKDNRALMKDFAKAF 84
          IS +EF +FAK NR L+KD AK F
Sbjct: 61 ISYQEFTEFAKANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG03g05820 vs. TrEMBL
Match: V7BAK1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G234700g PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-18
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 1 

Query: 1  MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MA+     A+ ERIFKRFDANGDG IS+AEL +AL  LG V AEE +RMM+ ID DGDG+
Sbjct: 1  MADDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVQRMMEEIDTDGDGY 60

Query: 61 ISLEEFADFAKDNRALMKDFAKAF 84
          IS EEF +FAK NR L+KD AK F
Sbjct: 61 ISHEEFTEFAKANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG03g05820 vs. TrEMBL
Match: G7K1Y2_MEDTR (EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-18
Identity = 54/84 (64.29%), Postives = 62/84 (73.81%), Query Frame = 1 

Query: 1  MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MAE     A+ ERIFKRFDANGDG IS+AEL +AL  LG V  +E KRMM+ ID DGDGF
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGKISSAELGEALETLGSVTGDEVKRMMEEIDTDGDGF 60

Query: 61 ISLEEFADFAKDNRALMKDFAKAF 84
          IS +EF +FAK NR L+KD AK F
Sbjct: 61 ISYDEFTEFAKANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG03g05820 vs. TAIR10
Match: AT3G03430.1 (AT3G03430.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 95.5 bits (236), Expect = 1.6e-20
Identity = 52/76 (68.42%), Postives = 57/76 (75.00%), Query Frame = 1 

Query: 9  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFISLEEFAD 68
          AE +RIFK+FDANGDG ISAAEL DAL  LG V  E+ KRMM  ID DGDG+IS +EF D
Sbjct: 8  AEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISYQEFID 67

Query: 69 FAKDNRALMKDFAKAF 84
          FA  NR LMKD AK F
Sbjct: 68 FASANRGLMKDVAKIF 83

[Close]
BLAST of Cp4.1LG03g05820 vs. TAIR10
Match: AT5G17480.1 (AT5G17480.1 pollen calcium-binding protein 1)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-19
Identity = 51/76 (67.11%), Postives = 57/76 (75.00%), Query Frame = 1 

Query: 9  AECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGFISLEEFAD 68
          AE +RIFK+FDANGDG ISAAEL +AL  LG V A++ KRMM  ID DGDG IS +EF D
Sbjct: 8  AEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGNISYQEFTD 67

Query: 69 FAKDNRALMKDFAKAF 84
          FA  NR LMKD AK F
Sbjct: 68 FAGANRGLMKDVAKIF 83

[Close]
BLAST of Cp4.1LG03g05820 vs. TAIR10
Match: AT1G66400.1 (AT1G66400.1 calmodulin like 23)

HSP 1 Score: 58.5 bits (140), Expect = 2.2e-09
Identity = 34/84 (40.48%), Postives = 46/84 (54.76%), Query Frame = 1 

Query: 7  SAAECERIFKRFDANGDGMISAAELVDALNGLGVNA--EEAKRMMDAIDKDGDGFISLEE 66
          S  + +++F+RFD N DG IS  EL D +  L  NA  EE K MM   D DG+GFI L+E
Sbjct: 12 SMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDE 71

Query: 67 FADF-----AKDNRALMKDFAKAF 84
          F           N + ++D  +AF
Sbjct: 72 FVALFQISDQSSNNSAIRDLKEAF 95

[Close]
BLAST of Cp4.1LG03g05820 vs. TAIR10
Match: AT1G73630.1 (AT1G73630.1 EF hand calcium-binding protein family)

HSP 1 Score: 58.5 bits (140), Expect = 2.2e-09
Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = 1 

Query: 10 ECERIFKRFDANGDGMISAAELVDALNGLGVN--AEEAKRMMDAIDKDGDGFISLEEFAD 69
          E +++F +FDANGDG IS +EL +    +G +   EE  R++D ID D DGFI+ EEFA 
Sbjct: 20 ELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFAT 79

Query: 70 FAKDNRALMK 78
            + + + ++
Sbjct: 80 ICRSSSSAVE 89

[Close]
BLAST of Cp4.1LG03g05820 vs. TAIR10
Match: AT3G17470.1 (AT3G17470.1 Ca2+-activated RelA/spot homolog)

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-08
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1 

Query: 12  ERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFISLEEFADFAKD 71
           +R+F   D NGDGMIS  EL++ +  LG   E+A+ MM  +D + DG +S +EF  F K 
Sbjct: 476 DRVFCLLDKNGDGMISIEELMEVMEELGAPGEDAEEMMQLLDSNSDGSLSSDEFDTFQKQ 535

Query: 72  NRALMK 78
              + K
Sbjct: 536 VEFMRK 541

[Close]
BLAST of Cp4.1LG03g05820 vs. NCBI nr
Match: gi|659114464|ref|XP_008457063.1| (PREDICTED: polcalcin Bra n 2-like [Cucumis melo])

HSP 1 Score: 137.9 bits (346), Expect = 8.1e-30
Identity = 67/83 (80.72%), Postives = 77/83 (92.77%), Query Frame = 1 

Query: 1  MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFI 60
          MA+S V++A+CERIFKRFDANGDG ISA EL DALNG GV++E+AKRMMDAIDKDGDG+I
Sbjct: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SLEEFADFAKDNRALMKDFAKAF 84
          S +EF+DFAKDNRALMKDFAKAF
Sbjct: 61 SFQEFSDFAKDNRALMKDFAKAF 83

[Close]
BLAST of Cp4.1LG03g05820 vs. NCBI nr
Match: gi|449464146|ref|XP_004149790.1| (PREDICTED: probable calcium-binding protein CML28 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-27
Identity = 65/83 (78.31%), Postives = 74/83 (89.16%), Query Frame = 1 

Query: 1  MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLGVNAEEAKRMMDAIDKDGDGFI 60
          MA+S V++A+ ERIFKRFDANGDG ISA EL DALN  GV++E+AKRMMDAIDKDGDG+I
Sbjct: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SLEEFADFAKDNRALMKDFAKAF 84
          S +EF DFAKDNRALMKDFAKAF
Sbjct: 61 SFQEFFDFAKDNRALMKDFAKAF 83

[Close]
BLAST of Cp4.1LG03g05820 vs. NCBI nr
Match: gi|356553301|ref|XP_003544995.1| (PREDICTED: polcalcin Nic t 1 [Glycine max])

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-19
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 1 

Query: 1  MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MAE     A+ ERIFKRFDANGDG IS+AEL +AL  LG V AEE KRMM+ ID DGDG+
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVKRMMEEIDTDGDGY 60

Query: 61 ISLEEFADFAKDNRALMKDFAKAF 84
          IS +EF +FAK NR L+KD AK F
Sbjct: 61 ISYQEFTEFAKANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG03g05820 vs. NCBI nr
Match: gi|593490053|ref|XP_007141894.1| (hypothetical protein PHAVU_008G234700g [Phaseolus vulgaris])

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-18
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 1 

Query: 1  MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MA+     A+ ERIFKRFDANGDG IS+AEL +AL  LG V AEE +RMM+ ID DGDG+
Sbjct: 1  MADDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVQRMMEEIDTDGDGY 60

Query: 61 ISLEEFADFAKDNRALMKDFAKAF 84
          IS EEF +FAK NR L+KD AK F
Sbjct: 61 ISHEEFTEFAKANRGLVKDVAKIF 84

[Close]
BLAST of Cp4.1LG03g05820 vs. NCBI nr
Match: gi|357492167|ref|XP_003616372.1| (EF hand calcium-binding family protein [Medicago truncatula])

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-18
Identity = 54/84 (64.29%), Postives = 62/84 (73.81%), Query Frame = 1 

Query: 1  MAESDVSAAECERIFKRFDANGDGMISAAELVDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MAE     A+ ERIFKRFDANGDG IS+AEL +AL  LG V  +E KRMM+ ID DGDGF
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGKISSAELGEALETLGSVTGDEVKRMMEEIDTDGDGF 60

Query: 61 ISLEEFADFAKDNRALMKDFAKAF 84
          IS +EF +FAK NR L+KD AK F
Sbjct: 61 ISYDEFTEFAKANRGLVKDVAKIF 84

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g05820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CML28_ARATH2.9e-1968.42Probable calcium-binding protein CML28 OS=Arabidopsis thaliana GN=CML28 PE=3 SV=... [more]
POLC4_BETPN8.4e-1965.79Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1[more]
POLC2_BRANA8.4e-1965.79Polcalcin Bra n 2 OS=Brassica napus PE=1 SV=1[more]
POLC2_BRACM8.4e-1965.79Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1[more]
ALL3_OLEEU1.4e-1861.90Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1[more]
BLAST of Cp4.1LG03g05820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L775_CUCSA1.5e-2778.31Putative calcium-binding protein CML28 OS=Cucumis sativus GN=Csa_3G345360 PE=4 S... [more]
A0A0B2S5H4_GLYSO2.0e-1965.48Polcalcin Nic t 1 OS=Glycine soja GN=glysoja_016839 PE=4 SV=1[more]
I1MBX4_SOYBN2.0e-1965.48Uncharacterized protein OS=Glycine max GN=GLYMA_14G216000 PE=4 SV=1[more]
V7BAK1_PHAVU1.0e-1864.29Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G234700g PE=4 SV=1[more]
G7K1Y2_MEDTR1.3e-1864.29EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE... [more]
BLAST of Cp4.1LG03g05820 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G03430.11.6e-2068.42 Calcium-binding EF-hand family protein[more]
AT5G17480.11.4e-1967.11 pollen calcium-binding protein 1[more]
AT1G66400.12.2e-0940.48 calmodulin like 23[more]
AT1G73630.12.2e-0941.43 EF hand calcium-binding protein family[more]
AT3G17470.11.4e-0840.91 Ca2+-activated RelA/spot homolog[more]
BLAST of Cp4.1LG03g05820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114464|ref|XP_008457063.1|8.1e-3080.72PREDICTED: polcalcin Bra n 2-like [Cucumis melo][more]
gi|449464146|ref|XP_004149790.1|2.2e-2778.31PREDICTED: probable calcium-binding protein CML28 [Cucumis sativus][more]
gi|356553301|ref|XP_003544995.1|2.9e-1965.48PREDICTED: polcalcin Nic t 1 [Glycine max][more]
gi|593490053|ref|XP_007141894.1|1.4e-1864.29hypothetical protein PHAVU_008G234700g [Phaseolus vulgaris][more]
gi|357492167|ref|XP_003616372.1|1.9e-1864.29EF hand calcium-binding family protein [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0044464 cell part
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g05820.1Cp4.1LG03g05820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 11..69
score: 2.5
IPR002048EF-hand domainSMARTSM00054efh_1coord: 10..38
score: 8.9E-5coord: 44..72
score: 1.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 43..75
score: 12.951coord: 6..41
score: 15
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 8..76
score: 3.4
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 9..69
score: 3.01
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 19..31
score: -coord: 53..65
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 1..83
score: 3.7
NoneNo IPR availablePANTHERPTHR10891:SF605CALCIUM-BINDING PROTEIN CML25-RELATEDcoord: 1..83
score: 3.7