CmaCh14G008490 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G008490
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Calcium binding protein
Location	Cma_Chr14 : 4343797 .. 4344048 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGAGTGACATAAGCGCAGCCGAGTGCGAGAGGATCTTCAAGCGATTCGACGCGAACGGCGACGGGATGATATCGGCGGCGGAGCTGGGCGATGCGTTGAACGGATTGGGAGTGAACGCGGAGGAGGCGAAGAGGATGATGGACGCGATTGACAAAGACGGCGATGGGTTCATATCGTGGGAAGAGTTCGCGGATTTCACCAAGGAAAATCGCGCGTTGATGAAAGATTTTGCGAAGGCGTTTTAA

mRNA sequence

ATGGCGGAGAGTGACATAAGCGCAGCCGAGTGCGAGAGGATCTTCAAGCGATTCGACGCGAACGGCGACGGGATGATATCGGCGGCGGAGCTGGGCGATGCGTTGAACGGATTGGGAGTGAACGCGGAGGAGGCGAAGAGGATGATGGACGCGATTGACAAAGACGGCGATGGGTTCATATCGTGGGAAGAGTTCGCGGATTTCACCAAGGAAAATCGCGCGTTGATGAAAGATTTTGCGAAGGCGTTTTAA

Coding sequence (CDS)

ATGGCGGAGAGTGACATAAGCGCAGCCGAGTGCGAGAGGATCTTCAAGCGATTCGACGCGAACGGCGACGGGATGATATCGGCGGCGGAGCTGGGCGATGCGTTGAACGGATTGGGAGTGAACGCGGAGGAGGCGAAGAGGATGATGGACGCGATTGACAAAGACGGCGATGGGTTCATATCGTGGGAAGAGTTCGCGGATTTCACCAAGGAAAATCGCGCGTTGATGAAAGATTTTGCGAAGGCGTTTTAA

Protein sequence

MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLGVNAEEAKRMMDAIDKDGDGFISWEEFADFTKENRALMKDFAKAF

Homology

[Close]

BLAST of CmaCh14G008490 vs. Swiss-Prot
Match: CML28_ARATH (Probable calcium-binding protein CML28 OS=Arabidopsis thaliana GN=CML28 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.0e-20
Identity = 52/76 (68.42%), Postives = 58/76 (76.32%), Query Frame = 1


Query: 9  AECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGFISWEEFAD 68
          AE +RIFK+FDANGDG ISAAELGDAL  LG V  E+ KRMM  ID DGDG+IS++EF D
Sbjct: 8  AEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISYQEFID 67

Query: 69 FTKENRALMKDFAKAF 84
          F   NR LMKD AK F
Sbjct: 68 FASANRGLMKDVAKIF 83

[Close]

BLAST of CmaCh14G008490 vs. Swiss-Prot
Match: POLC2_BRACM (Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.8e-20
Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = 1


Query: 9  AECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGFISWEEFAD 68
          AE +RIFK+FDANGDG ISA+ELGDAL  LG V  ++ KRMM  ID DGDG+IS++EF+D
Sbjct: 8  AEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGYISYQEFSD 67

Query: 69 FTKENRALMKDFAKAF 84
          F   NR LMKD AK F
Sbjct: 68 FASANRGLMKDVAKIF 83

[Close]

BLAST of CmaCh14G008490 vs. Swiss-Prot
Match: POLC4_BETPN (Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.8e-20
Identity = 51/76 (67.11%), Postives = 58/76 (76.32%), Query Frame = 1


Query: 9  AECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGFISWEEFAD 68
          AE ERIFKRFDANGDG ISAAELG+AL  LG +  +E K MM  ID DGDGFIS++EF D
Sbjct: 10 AERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDGFISFQEFTD 69

Query: 69 FTKENRALMKDFAKAF 84
          F + NR L+KD AK F
Sbjct: 70 FGRANRGLLKDVAKIF 85

[Close]

BLAST of CmaCh14G008490 vs. Swiss-Prot
Match: POLC2_BRANA (Polcalcin Bra n 2 OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 5.8e-20
Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = 1


Query: 9  AECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGFISWEEFAD 68
          AE +RIFK+FDANGDG ISA+ELGDAL  LG V  ++ KRMM  ID DGDG+IS++EF+D
Sbjct: 8  AEHDRIFKKFDANGDGKISASELGDALKNLGSVTHDDIKRMMAEIDTDGDGYISYQEFSD 67

Query: 69 FTKENRALMKDFAKAF 84
          F   NR LMKD AK F
Sbjct: 68 FASANRGLMKDVAKIF 83

[Close]

BLAST of CmaCh14G008490 vs. Swiss-Prot
Match: ALL3_OLEEU (Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-19
Identity = 52/84 (61.90%), Postives = 60/84 (71.43%), Query Frame = 1


Query: 1  MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MA+     AE ERIFKRFDANGDG IS++ELG+ L  LG V  EE +RMM  ID DGDGF
Sbjct: 1  MADDPQEVAEHERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGF 60

Query: 61 ISWEEFADFTKENRALMKDFAKAF 84
          IS+EEF  F + NR L+KD AK F
Sbjct: 61 ISFEEFTVFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh14G008490 vs. TrEMBL
Match: A0A0A0L775_CUCSA (Putative calcium-binding protein CML28 OS=Cucumis sativus GN=Csa_3G345360 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 6.9e-28
Identity = 63/83 (75.90%), Postives = 75/83 (90.36%), Query Frame = 1


Query: 1  MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLGVNAEEAKRMMDAIDKDGDGFI 60
          MA+S +++A+ ERIFKRFDANGDG ISA ELGDALN  GV++E+AKRMMDAIDKDGDG+I
Sbjct: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SWEEFADFTKENRALMKDFAKAF 84
          S++EF DF K+NRALMKDFAKAF
Sbjct: 61 SFQEFFDFAKDNRALMKDFAKAF 83

[Close]

BLAST of CmaCh14G008490 vs. TrEMBL
Match: I1MBX4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G216000 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-20
Identity = 55/84 (65.48%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 1  MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MAE     A+ ERIFKRFDANGDG IS+AELG+AL  LG V AEE KRMM+ ID DGDG+
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVKRMMEEIDTDGDGY 60

Query: 61 ISWEEFADFTKENRALMKDFAKAF 84
          IS++EF +F K NR L+KD AK F
Sbjct: 61 ISYQEFTEFAKANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh14G008490 vs. TrEMBL
Match: A0A0B2S5H4_GLYSO (Polcalcin Nic t 1 OS=Glycine soja GN=glysoja_016839 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-20
Identity = 55/84 (65.48%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 1  MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MAE     A+ ERIFKRFDANGDG IS+AELG+AL  LG V AEE KRMM+ ID DGDG+
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVKRMMEEIDTDGDGY 60

Query: 61 ISWEEFADFTKENRALMKDFAKAF 84
          IS++EF +F K NR L+KD AK F
Sbjct: 61 ISYQEFTEFAKANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh14G008490 vs. TrEMBL
Match: G7K1Y2_MEDTR (EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.0e-20
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 1  MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MAE     A+ ERIFKRFDANGDG IS+AELG+AL  LG V  +E KRMM+ ID DGDGF
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGKISSAELGEALETLGSVTGDEVKRMMEEIDTDGDGF 60

Query: 61 ISWEEFADFTKENRALMKDFAKAF 84
          IS++EF +F K NR L+KD AK F
Sbjct: 61 ISYDEFTEFAKANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh14G008490 vs. TrEMBL
Match: A0A0A0KQB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-19
Identity = 55/84 (65.48%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 1  MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MA+     AE ERIFKRFDANGDG IS+AELG+AL  LG V A+E +RMM  ID DGDGF
Sbjct: 1  MADDPQDQAERERIFKRFDANGDGKISSAELGEALKTLGSVTADEVQRMMAEIDTDGDGF 60

Query: 61 ISWEEFADFTKENRALMKDFAKAF 84
          IS+EEF DF + NR L+KD AK F
Sbjct: 61 ISYEEFTDFARANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh14G008490 vs. TAIR10
Match: AT3G03430.1 (AT3G03430.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 99.4 bits (246), Expect = 1.1e-21
Identity = 52/76 (68.42%), Postives = 58/76 (76.32%), Query Frame = 1


Query: 9  AECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGFISWEEFAD 68
          AE +RIFK+FDANGDG ISAAELGDAL  LG V  E+ KRMM  ID DGDG+IS++EF D
Sbjct: 8  AEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISYQEFID 67

Query: 69 FTKENRALMKDFAKAF 84
          F   NR LMKD AK F
Sbjct: 68 FASANRGLMKDVAKIF 83

[Close]

BLAST of CmaCh14G008490 vs. TAIR10
Match: AT5G17480.1 (AT5G17480.1 pollen calcium-binding protein 1)

HSP 1 Score: 92.8 bits (229), Expect = 1.1e-19
Identity = 50/76 (65.79%), Postives = 57/76 (75.00%), Query Frame = 1


Query: 9  AECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGFISWEEFAD 68
          AE +RIFK+FDANGDG ISAAEL +AL  LG V A++ KRMM  ID DGDG IS++EF D
Sbjct: 8  AEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGNISYQEFTD 67

Query: 69 FTKENRALMKDFAKAF 84
          F   NR LMKD AK F
Sbjct: 68 FAGANRGLMKDVAKIF 83

[Close]

BLAST of CmaCh14G008490 vs. TAIR10
Match: AT1G73630.1 (AT1G73630.1 EF hand calcium-binding protein family)

HSP 1 Score: 62.0 bits (149), Expect = 2.0e-10
Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 1


Query: 10 ECERIFKRFDANGDGMISAAELGDALNGLGVN--AEEAKRMMDAIDKDGDGFISWEEFAD 69
          E +++F +FDANGDG IS +ELG+    +G +   EE  R++D ID D DGFI+ EEFA 
Sbjct: 20 ELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFAT 79

Query: 70 FTKENRALMK 78
            + + + ++
Sbjct: 80 ICRSSSSAVE 89

[Close]

BLAST of CmaCh14G008490 vs. TAIR10
Match: AT1G24620.1 (AT1G24620.1 EF hand calcium-binding protein family)

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-09
Identity = 29/60 (48.33%), Postives = 41/60 (68.33%), Query Frame = 1


Query: 10 ECERIFKRFDANGDGMISAAELGDALNGLG--VNAEEAKRMMDAIDKDGDGFISWEEFAD 68
          E E +FK+FD NGDG IS+ ELG  +  LG  V  EE ++ +  ID+ GDG+I++EEF +
Sbjct: 37 ELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVE 96

[Close]

BLAST of CmaCh14G008490 vs. TAIR10
Match: AT1G66400.1 (AT1G66400.1 calmodulin like 23)

HSP 1 Score: 57.0 bits (136), Expect = 6.4e-09
Identity = 33/84 (39.29%), Postives = 45/84 (53.57%), Query Frame = 1


Query: 7  SAAECERIFKRFDANGDGMISAAELGDALNGLGVNA--EEAKRMMDAIDKDGDGFISWEE 66
          S  + +++F+RFD N DG IS  EL D +  L  NA  EE K MM   D DG+GFI  +E
Sbjct: 12 SMEDIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDE 71

Query: 67 FADF-----TKENRALMKDFAKAF 84
          F           N + ++D  +AF
Sbjct: 72 FVALFQISDQSSNNSAIRDLKEAF 95

[Close]

BLAST of CmaCh14G008490 vs. NCBI nr
Match: gi|659114464|ref|XP_008457063.1| (PREDICTED: polcalcin Bra n 2-like [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-30
Identity = 65/83 (78.31%), Postives = 78/83 (93.98%), Query Frame = 1


Query: 1  MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLGVNAEEAKRMMDAIDKDGDGFI 60
          MA+S +++A+CERIFKRFDANGDG ISA ELGDALNG GV++E+AKRMMDAIDKDGDG+I
Sbjct: 1  MADSGVNSADCERIFKRFDANGDGKISATELGDALNGFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SWEEFADFTKENRALMKDFAKAF 84
          S++EF+DF K+NRALMKDFAKAF
Sbjct: 61 SFQEFSDFAKDNRALMKDFAKAF 83

[Close]

BLAST of CmaCh14G008490 vs. NCBI nr
Match: gi|449464146|ref|XP_004149790.1| (PREDICTED: probable calcium-binding protein CML28 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 9.9e-28
Identity = 63/83 (75.90%), Postives = 75/83 (90.36%), Query Frame = 1


Query: 1  MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLGVNAEEAKRMMDAIDKDGDGFI 60
          MA+S +++A+ ERIFKRFDANGDG ISA ELGDALN  GV++E+AKRMMDAIDKDGDG+I
Sbjct: 1  MADSGVNSADLERIFKRFDANGDGKISATELGDALNEFGVSSEDAKRMMDAIDKDGDGYI 60

Query: 61 SWEEFADFTKENRALMKDFAKAF 84
          S++EF DF K+NRALMKDFAKAF
Sbjct: 61 SFQEFFDFAKDNRALMKDFAKAF 83

[Close]

BLAST of CmaCh14G008490 vs. NCBI nr
Match: gi|356553301|ref|XP_003544995.1| (PREDICTED: polcalcin Nic t 1 [Glycine max])

HSP 1 Score: 106.7 bits (265), Expect = 2.0e-20
Identity = 55/84 (65.48%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 1  MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MAE     A+ ERIFKRFDANGDG IS+AELG+AL  LG V AEE KRMM+ ID DGDG+
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVKRMMEEIDTDGDGY 60

Query: 61 ISWEEFADFTKENRALMKDFAKAF 84
          IS++EF +F K NR L+KD AK F
Sbjct: 61 ISYQEFTEFAKANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh14G008490 vs. NCBI nr
Match: gi|357492167|ref|XP_003616372.1| (EF hand calcium-binding family protein [Medicago truncatula])

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-19
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 1  MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MAE     A+ ERIFKRFDANGDG IS+AELG+AL  LG V  +E KRMM+ ID DGDGF
Sbjct: 1  MAEDPQDVADRERIFKRFDANGDGKISSAELGEALETLGSVTGDEVKRMMEEIDTDGDGF 60

Query: 61 ISWEEFADFTKENRALMKDFAKAF 84
          IS++EF +F K NR L+KD AK F
Sbjct: 61 ISYDEFTEFAKANRGLVKDVAKIF 84

[Close]

BLAST of CmaCh14G008490 vs. NCBI nr
Match: gi|593490053|ref|XP_007141894.1| (hypothetical protein PHAVU_008G234700g [Phaseolus vulgaris])

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-19
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 1  MAESDISAAECERIFKRFDANGDGMISAAELGDALNGLG-VNAEEAKRMMDAIDKDGDGF 60
          MA+     A+ ERIFKRFDANGDG IS+AELG+AL  LG V AEE +RMM+ ID DGDG+
Sbjct: 1  MADDPQDVADRERIFKRFDANGDGQISSAELGEALKALGSVTAEEVQRMMEEIDTDGDGY 60

Query: 61 ISWEEFADFTKENRALMKDFAKAF 84
          IS EEF +F K NR L+KD AK F
Sbjct: 61 ISHEEFTEFAKANRGLVKDVAKIF 84

The following BLAST results are available for this feature:

BLAST of CmaCh14G008490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CML28_ARATH	2.0e-20	68.42	Probable calcium-binding protein CML28 OS=Arabidopsis thaliana GN=CML28 PE=3 SV=...	[more]
POLC2_BRACM	5.8e-20	65.79	Polcalcin Bra r 2 OS=Brassica campestris PE=1 SV=1	[more]
POLC4_BETPN	5.8e-20	67.11	Polcalcin Bet v 4 OS=Betula pendula GN=BETV4 PE=1 SV=1	[more]
POLC2_BRANA	5.8e-20	65.79	Polcalcin Bra n 2 OS=Brassica napus PE=1 SV=1	[more]
ALL3_OLEEU	1.7e-19	61.90	Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1	[more]

BLAST of CmaCh14G008490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L775_CUCSA	6.9e-28	75.90	Putative calcium-binding protein CML28 OS=Cucumis sativus GN=Csa_3G345360 PE=4 S...	[more]
I1MBX4_SOYBN	1.4e-20	65.48	Uncharacterized protein OS=Glycine max GN=GLYMA_14G216000 PE=4 SV=1	[more]
A0A0B2S5H4_GLYSO	1.4e-20	65.48	Polcalcin Nic t 1 OS=Glycine soja GN=glysoja_016839 PE=4 SV=1	[more]
G7K1Y2_MEDTR	9.0e-20	64.29	EF hand calcium-binding family protein OS=Medicago truncatula GN=MTR_5g079470 PE...	[more]
A0A0A0KQB8_CUCSA	1.2e-19	65.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420320 PE=4 SV=1	[more]

BLAST of CmaCh14G008490 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03430.1	1.1e-21	68.42	Calcium-binding EF-hand family protein	[more]
AT5G17480.1	1.1e-19	65.79	pollen calcium-binding protein 1	[more]
AT1G73630.1	2.0e-10	42.86	EF hand calcium-binding protein family	[more]
AT1G24620.1	1.7e-09	48.33	EF hand calcium-binding protein family	[more]
AT1G66400.1	6.4e-09	39.29	calmodulin like 23	[more]

BLAST of CmaCh14G008490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114464\|ref\|XP_008457063.1\|	3.6e-30	78.31	PREDICTED: polcalcin Bra n 2-like [Cucumis melo]	[more]
gi\|449464146\|ref\|XP_004149790.1\|	9.9e-28	75.90	PREDICTED: probable calcium-binding protein CML28 [Cucumis sativus]	[more]
gi\|356553301\|ref\|XP_003544995.1\|	2.0e-20	65.48	PREDICTED: polcalcin Nic t 1 [Glycine max]	[more]
gi\|357492167\|ref\|XP_003616372.1\|	1.3e-19	64.29	EF hand calcium-binding family protein [Medicago truncatula]	[more]
gi\|593490053\|ref\|XP_007141894.1\|	1.7e-19	64.29	hypothetical protein PHAVU_008G234700g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair
IPR018247	EF_Hand_1_Ca_BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0005509	calcium ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005509	calcium ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G008490.1	CmaCh14G008490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 11..69 score: 1.5
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 44..72 score: 0.0052coord: 10..38 score: 2.
IPR002048	EF-hand domain	PROFILE	PS50222	EF_HAND_2	coord: 43..75 score: 12.728coord: 6..41 score: 15
IPR011992	EF-hand domain pair	GENE3D	G3DSA:1.10.238.10		coord: 8..75 score: 2.0
IPR011992	EF-hand domain pair	unknown	SSF47473	EF-hand	coord: 10..69 score: 2.05
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 53..65 score: -coord: 19..31 scor
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 1..72 score: 3.3
None	No IPR available	PANTHER	PTHR10891:SF605	CALCIUM-BINDING PROTEIN CML25-RELATED	coord: 1..72 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G008490	Cucsa.012590	Cucumber (Gy14) v1	cgycmaB0548
CmaCh14G008490	Cla013179	Watermelon (97103) v1	cmawmB243
CmaCh14G008490	Csa3G345360	Cucumber (Chinese Long) v2	cmacuB242
CmaCh14G008490	MELO3C020277	Melon (DHL92) v3.5.1	cmameB243
CmaCh14G008490	ClCG05G011030	Watermelon (Charleston Gray)	cmawcgB234
CmaCh14G008490	CSPI03G21770	Wild cucumber (PI 183967)	cmacpiB244
CmaCh14G008490	CmoCh01G003750	Cucurbita moschata (Rifu)	cmacmoB257
CmaCh14G008490	CmoCh14G008630	Cucurbita moschata (Rifu)	cmacmoB244
CmaCh14G008490	Lsi05G003120	Bottle gourd (USVL1VR-Ls)	cmalsiB249
CmaCh14G008490	Cp4.1LG02g16720	Cucurbita pepo (Zucchini)	cmacpeB279
CmaCh14G008490	Cp4.1LG03g05820	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G008490	MELO3C020277.2	Melon (DHL92) v3.6.1	cmamedB274
CmaCh14G008490	CsaV3_3G021560	Cucumber (Chinese Long) v3	cmacucB0281
CmaCh14G008490	Bhi01G001354	Wax gourd	cmawgoB0333
CmaCh14G008490	CsGy3G020960	Cucumber (Gy14) v2	cgybcmaB308
CmaCh14G008490	Carg07447	Silver-seed gourd	carcmaB1057
CmaCh14G008490	Carg24222	Silver-seed gourd	carcmaB0240

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh14G008490	CmaCh01G003590	Cucurbita maxima (Rimu)	cmacmaB255

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G008490	Watermelon (97103) v2	cmawmbB264