MELO3C006010 (gene) Melon (DHL92) v3.5.1

NameMELO3C006010
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative uncharacterized protein DPL2
Locationchr6 : 547700 .. 549918 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCCCCCGCGCCCCATCATAGCTTTGATTTAAACCCTATTTCACCACCACCCATCCCCGCCCTCTCACTACCGGACACTGCAGCCCTTTCCGGTGTACGCCGCTGCCGCTGCCGCTCCAGAGCATATATTTTTCTATTTCATGTACCTGCCTCGAACTGGTACGATTGAAGTTTTTGTTGATTTTCAGTTCATTTATATGATTTATGCTATCTGGATGTTTACCATTCAACTCTATTTTTAGTTTTTGCAATCGTCCCTCTTCCTCGACTTCTTTGATTTGCGTTATCTCATCGACATTTTTTTCCTACTTTTCTTAGCTATCATTTACACGATGTTTTGGTTTACGCAATGATTTGATTTAACTATAAATTTTTGTTCTGCCGTATAATCGGACTTCGATTGGAGAAAGTTCGCAAACATTAGGGTTAAATGCTAAAGACGTTTAAGCATCTCAGCTGAAAAATGGGCTTAAATGCTTAGCGAAAAAACTCGTGATTGCCTTTTCATCCTCGCTTTACTTTTCCAGTATTATTTTTCGATTGGTGCATTGTTAGTTTTAGTAATATACTTAACCTTCTTCGCTTTTGCTTAGACGATAAACCTTATCAATGCTTAAGCTAAGATAGTCTGTAATAAATTTATAAGATCTTTTCGTTGGACTTTTTAGTTGGGAAGAAACAATCGAATTTTTAGGAGTAGGTGCTTTTTGAGTTGGGTGCATCTCACCTTTCTATGGCTCTATTTCGATGAGGATTGTCGAACTGTAGTTATCTTCTCTTTGAGCTAGTTTAAAGTTTTTCTCATAATTCGATTCATTTAGACTAGCTGAGGCTTCCGTATCATTCTTCTTTACATAAGTCATACTTTAGCGAATCGGGGAAAAAAGTAATTTGAACATTTTATGTGTTGTTTGGATTTGGAGGATTTAAAACGAGGACATGAGTTCACTTTCCTAATTGCATTTGGAACCAAACTGGCTAGATCACCACAATTAAATCTTCTTGTTTGTATAGCTATGAGAAATGAAAAGAAAGCGAGACATTGTACCCGAGAACTTTTATTAATAAGTCAAATATCATTTAATAAAAATGAAATCAACTTATTGAATTAAAACTCGAATGATCTACATTGTCAAAAAGAAAGAAAAAACTGACAAATTCTAAAATTTCAGAACAATTATTTTACAATTATATCTTTATAACCATATATAAACTAAACAATTGTTTGTAAATTTATATATCCTTTCACATCTGCTGGTTCCTAACAGAGAGTCATTTTTGTTTTAGGTTGAAGGGCGTGAGAGTTGAGTTAGAAGCAACCTAGAGATAGCTATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTCAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGACCCCTTCCTTATGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGTATCGGTGCTGGTATGCTGGTGGAGATGTGGATAAATGATAAAATTAAAAGTAAGTTCTGAATATAGATCTTTACATATTCAAAATCTTGTTGTAAATTGATTAATGCTCGATTTCACACTTATACACACAGTTTTAATAACCATGAAATTTTATTTTAAAAGAGTAGAAACATGTTTAGTACTGATTTTGAATACTGACAAAGGGTATTTTTAGCCAGTTTAAGCTATAAATCTTCATGCTCCTGGAAGTATCTTTTCTGACATCTCTCTGTTTTTCTTTTTAATCTACATCTATGCAAGATAAGTCAGTGCGATTGATTATTGATTTTCCTTTCTGATGTGTTCTTACAGAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAGAGTACAAGAGTAGTTGAAGTTGGAACAAGATCGTCGTGTTGCTGGGTTTTGTTTTATTGTTAATCTTAGTTATGGAACATGTAATGTAAGTGAACATCTTTTTAATGCCTCAATGAAGTTGTACAAAAATTGGAAGCAATAATTGTAAGTTTGTTTTTTGTTTTTGTTTTTCTTTTTTAAAGCGATAAATAACCTCCAATTCAGTTATTGGCAGTTTGTTTCTCTAATTATTGATCAAAAGCACAAGTGATATTAATGCAATCATTTTT

mRNA sequence

ATGCTCCCCCCGCGCCCCATCATAGCTTTGATTTAAACCCTATTTCACCACCACCCATCCCCGCCCTCTCACTACCGGACACTGCAGCCCTTTCCGGTGTACGCCGCTGCCGCTGCCGCTCCAGAGCATATATTTTTCTATTTCATGTACCTGCCTCGAACTGGTTGAAGGGCGTGAGAGTTGAGTTAGAAGCAACCTAGAGATAGCTATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTCAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGACCCCTTCCTTATGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGTATCGGTGCTGGTATGCTGGTGGAGATGTGGATAAATGATAAAATTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAGAGTACAAGAGTAGTTGAAGTTGGAACAAGATCGTCGTGTTGCTGGGTTTTGTTTTATTGTTAATCTTAGTTATGGAACATGTAATGTAAGTGAACATCTTTTTAATGCCTCAATGAAGTTGTACAAAAATTGGAAGCAATAATTGTAAGTTTGTTTTTTGTTTTTGTTTTTCTTTTTTAAAGCGATAAATAACCTCCAATTCAGTTATTGGCAGTTTGTTTCTCTAATTATTGATCAAAAGCACAAGTGATATTAATGCAATCATTTTT

Coding sequence (CDS)

ATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTCAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGACCCCTTCCTTATGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGTATCGGTGCTGGTATGCTGGTGGAGATGTGGATAAATGATAAAATTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAG

Protein sequence

MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK*
BLAST of MELO3C006010 vs. TrEMBL
Match: A0A0A0L8I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119440 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 8.6e-52
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1

Query: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60
           MGVEQNDPLKGVEQKDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR
Sbjct: 1   MGVEQNDPLKGVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60

Query: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
            LP VMAFYGACIAGGIGAGMLVE+WINDKIKKDGGVIWEFDK
Sbjct: 61  SLPSVMAFYGACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

BLAST of MELO3C006010 vs. TrEMBL
Match: B9GK55_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s11560g PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 7.8e-37
Identity = 73/93 (78.49%), Postives = 83/93 (89.25%), Query Frame = 1

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSSTN--IIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 72
           E KDPFKGVDWKA+GG++QKDPS+    IIKKR P KIRQIPDYYFLPR PLP V+AFYG
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSAGTKPIIKKRLPKKIRQIPDYYFLPRLPLPTVIAFYG 64

Query: 73  ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           ACIAGG+GAGML+EMWIN K+K+DGG+IWEFDK
Sbjct: 65  ACIAGGVGAGMLLEMWINKKVKEDGGIIWEFDK 97

BLAST of MELO3C006010 vs. TrEMBL
Match: B9SBE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716680 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 8.6e-36
Identity = 71/93 (76.34%), Postives = 83/93 (89.25%), Query Frame = 1

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSS--TNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 72
           E KDPFKGVDWKA+GG++QKDPS+   ++I+KR P KIRQIPDYYFLPRR LP  +AFYG
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSAGAKSVIRKRLPKKIRQIPDYYFLPRRSLPSAIAFYG 64

Query: 73  ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           ACIAGGIGAGML+E+WIN K+K+DGGVIWEFDK
Sbjct: 65  ACIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

BLAST of MELO3C006010 vs. TrEMBL
Match: A0A067JX58_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14238 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-35
Identity = 70/93 (75.27%), Postives = 82/93 (88.17%), Query Frame = 1

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSSTN--IIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 72
           E KDPFKGVDWKA+GG++QKDPS++   +IKKR P K+RQIPDYYFLPRR LP  +AFYG
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSASAKPVIKKRLPKKVRQIPDYYFLPRRSLPSAIAFYG 64

Query: 73  ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
            CIAGGIGAGML+E+WIN K+K+DGGVIWEFDK
Sbjct: 65  GCIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

BLAST of MELO3C006010 vs. TrEMBL
Match: M5WRN2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015708mg PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.5e-35
Identity = 73/91 (80.22%), Postives = 78/91 (85.71%), Query Frame = 1

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYGAC 72
           E KDPFKGVDWKAVG DMQKDPS    IKKR P KIRQIPD YFLPRR LPY +AF+GAC
Sbjct: 74  EPKDPFKGVDWKAVGSDMQKDPSVKPGIKKRLPRKIRQIPDCYFLPRRSLPYNIAFFGAC 133

Query: 73  IAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           IAGGIGAGML+E+WIN K+K DGGVIWEFDK
Sbjct: 134 IAGGIGAGMLLEVWINKKVKDDGGVIWEFDK 164

BLAST of MELO3C006010 vs. TAIR10
Match: AT5G16950.1 (AT5G16950.1 unknown protein)

HSP 1 Score: 95.1 bits (235), Expect = 2.7e-20
Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 1

Query: 15  KDPFKGVDWKAVGGDMQKDPSSTNI-----IKKRRPTKIRQIPDYYFLPRRPLPYVMAFY 74
           KDP+KG +W     +  K P+++ +      +K+ P  +    + YFLPR+P P  +A+Y
Sbjct: 7   KDPWKGEEW-GTENEKTKKPTTSGVKTVTRARKQIPRGLEDKYEAYFLPRKPWPRALAYY 66

Query: 75  GACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           G+ I GGIGAGM++E WIN K+K+DGGVIWEFDK
Sbjct: 67  GSFILGGIGAGMVIEAWINKKVKEDGGVIWEFDK 99

BLAST of MELO3C006010 vs. NCBI nr
Match: gi|659074925|ref|XP_008437869.1| (PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo])

HSP 1 Score: 221.1 bits (562), Expect = 9.1e-55
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1

Query: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60
           MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR
Sbjct: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60

Query: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK
Sbjct: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103

BLAST of MELO3C006010 vs. NCBI nr
Match: gi|449432034|ref|XP_004133805.1| (PREDICTED: uncharacterized protein LOC101207877 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-51
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1

Query: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60
           MGVEQNDPLKGVEQKDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR
Sbjct: 1   MGVEQNDPLKGVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60

Query: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
            LP VMAFYGACIAGGIGAGMLVE+WINDKIKKDGGVIWEFDK
Sbjct: 61  SLPSVMAFYGACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

BLAST of MELO3C006010 vs. NCBI nr
Match: gi|224053703|ref|XP_002297937.1| (hypothetical protein POPTR_0001s11560g [Populus trichocarpa])

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-36
Identity = 73/93 (78.49%), Postives = 83/93 (89.25%), Query Frame = 1

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSSTN--IIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 72
           E KDPFKGVDWKA+GG++QKDPS+    IIKKR P KIRQIPDYYFLPR PLP V+AFYG
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSAGTKPIIKKRLPKKIRQIPDYYFLPRLPLPTVIAFYG 64

Query: 73  ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           ACIAGG+GAGML+EMWIN K+K+DGG+IWEFDK
Sbjct: 65  ACIAGGVGAGMLLEMWINKKVKEDGGIIWEFDK 97

BLAST of MELO3C006010 vs. NCBI nr
Match: gi|743842664|ref|XP_011026757.1| (PREDICTED: uncharacterized protein LOC105127238 [Populus euphratica])

HSP 1 Score: 160.2 bits (404), Expect = 1.9e-36
Identity = 72/93 (77.42%), Postives = 82/93 (88.17%), Query Frame = 1

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSSTN--IIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 72
           E KDPFKGVDWKA+GG++QKDPS+    IIKKR P KIRQIPDYYFLPR PLP  +AFYG
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSAVTKPIIKKRLPKKIRQIPDYYFLPRLPLPTAIAFYG 64

Query: 73  ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           ACIAGG+GAGML+EMWIN K+K+DGG+IWEFDK
Sbjct: 65  ACIAGGVGAGMLLEMWINKKVKEDGGIIWEFDK 97

BLAST of MELO3C006010 vs. NCBI nr
Match: gi|255564645|ref|XP_002523317.1| (PREDICTED: uncharacterized protein LOC8263493 [Ricinus communis])

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-35
Identity = 71/93 (76.34%), Postives = 83/93 (89.25%), Query Frame = 1

Query: 13  EQKDPFKGVDWKAVGGDMQKDPSS--TNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 72
           E KDPFKGVDWKA+GG++QKDPS+   ++I+KR P KIRQIPDYYFLPRR LP  +AFYG
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSAGAKSVIRKRLPKKIRQIPDYYFLPRRSLPSAIAFYG 64

Query: 73  ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 104
           ACIAGGIGAGML+E+WIN K+K+DGGVIWEFDK
Sbjct: 65  ACIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L8I7_CUCSA8.6e-5296.12Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119440 PE=4 SV=1[more]
B9GK55_POPTR7.8e-3778.49Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s11560g PE=4 SV=1[more]
B9SBE8_RICCO8.6e-3676.34Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716680 PE=4 SV=1[more]
A0A067JX58_JATCU1.9e-3575.27Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14238 PE=4 SV=1[more]
M5WRN2_PRUPE2.5e-3580.22Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015708mg PE=4 S... [more]
Match NameE-valueIdentityDescription
AT5G16950.12.7e-2046.81 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659074925|ref|XP_008437869.1|9.1e-55100.00PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo][more]
gi|449432034|ref|XP_004133805.1|1.2e-5196.12PREDICTED: uncharacterized protein LOC101207877 [Cucumis sativus][more]
gi|224053703|ref|XP_002297937.1|1.1e-3678.49hypothetical protein POPTR_0001s11560g [Populus trichocarpa][more]
gi|743842664|ref|XP_011026757.1|1.9e-3677.42PREDICTED: uncharacterized protein LOC105127238 [Populus euphratica][more]
gi|255564645|ref|XP_002523317.1|1.2e-3576.34PREDICTED: uncharacterized protein LOC8263493 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU44962melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006010T1MELO3C006010T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU44962MU44962transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36797FAMILY NOT NAMEDcoord: 13..103
score: 2.4
NoneNo IPR availablePANTHERPTHR36797:SF1SUBFAMILY NOT NAMEDcoord: 13..103
score: 2.4

The following gene(s) are paralogous to this gene:

None