Carg20905 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATTTTTGGGTGGTTTTTTTAATTAAAAAAAGAGTTTGCCCTAATTTGCTCATCGTGAATCTGTGCCTTTCCAACTCTCTCTCGAAATCAATCTTCATCTCTCATTGCTTAATACAATCCACTGGACCACCGCCCTCACGGCGTCGCACAACGTCAATTCCGGCCGCTTTCGATTCTTTTGCTTATCTCCCTTGGACTGGTAGGATTGAAGTTTTTGTTAGTTTTCCGATTCTTCCATTTTTCCATTTCTAGTTTCTGCTGTCGCCCCCTTCCTCGATTTCTTCGATTTACATTATGTCATCTACATTTTCCTACTTTTCTTGGTTATAATTTATGTGCTGTGTTTAGTTTATGTTATGAATTAAGTTTTGTTTAATTTTTTGTTTTTTAGTCGTAGAATTGGACTTGGGTTGATTAAGTAAAATCTGGAAATTGGGTTAAATGTTAAAAATCTGTAATCAAATCAAAACTGAAGAATGTGCTTGAATTCTATGCTGTGAGTGAGGCAAACACTGGCGAAGAAACTCAGGATTGCCTTTCCATCCTCTGTTCAGTAGCATTGCTTTTCCGGCATTACCGTCGTTTGGTACCTTTTTCTTCCTAGTAATATTATTAAATGAACATTCTTCACTTTGCTTCCATGATCACCCTCCCAATGCTGAAGCATTAGACTTATTTGGAATAATTAAGGGTTTTCTTTGGAATTTTTAGTTGGGAAGGAACAATAGAGTTCTTCCGGGAGCATATTGGTTTCTTATGGCTCTACTTTGGTGCAGATTATCCAACCCTTTTTCATACTATATAGGTTATCTTCTCTTTGATCCAGTTCGAAAGTTTTCTTGTAAATCTATTCTTTTAGCCAGGCTGAGGCCGAGGCTGAGGCTGAGGCTGAGGCTTTCCTATCCTTCATTTTGCACATTTCATACTTTCAGTGAATCATTTTCTTATGCAAGACAAGTAATTTGAACCTTTATTCTTTTTGGTTTTGGTTTGAAGCGTATCAGATTTGAGTTAGAGGCAATCAACAGACAGCTATGGCAGAAGAGGCAAAAGACCCTTTCAAGGGAGTCGATTGGAAAGCCGTGGGTGGCGATATGCAGAAAGATCCCAGCTCTATAAACATTTTAAAGAAAAGGCGTCCAACAAAAGTTAGGCAAATTCCAGAGTATTATTTTCTTCCTAGAAGATCCCTTCCCTCGGTCCTTGCATTCTATGGGGCGTGTATTGCAGGTGGAATTGGAGCTGGGATGCTGGTGGAGATATGGATTAAGGATAAAGTTAAAAGTAAGCTTTGAATTTGCTTTTAATAGTCTTACTTCATAATCCTAGCAATACCATTAACCTTATCCATAATTCATAGCTTTTTTACTTCCTCTGTTTTTCTTTTAGTTAAATTATCGATAGGTTTCTCAAACTTGGAAAAGACCTTTAGAAGTGTCCGATACGATAGATATTTAAACTTTCAATCTTGTGTCCAATAGAACCTACTCGACATAAAATTGAAACTTTAAAATCATTCGTGCTTTTTAAAATTTATGATCCTACATGACATGAAATTGAAATTTTAAAGTCTTCATTCAATTCTATATCTAATTGATCAATTAGTTTATTAAATTTTCAAATATGTTAGGGACATATAAGAAACTAAATGGAAAATTCAAGAACCTACTCGATATTTCTAAAATTAAGGGACCTATTAGATACACTTTTTTATGTAAAAAAATGTCTTGAACACAAAATTGATAGTTCAATGACAAAATCTATGACTTAACATTTTCTTTTTGATGTGTATAAGAAATAGACAGTGTGATTGACTATTGAAGTTTCTTTTTCGATGTGTTCTTGCAGAGGATGGAGGTGTGGTCTGGGAGTTTGACAAGTAGAGTACAGAAGTATGAAGTTGTAATAAGATCATCCAGTTCTGGGTTTTTGTTTTGTTGTCAATTCTTAGTTTTGGCACATATAAAGGAAAACATCTTTTATTGTCACTGTGAAGTTGTACAAAAATTGGAAGCAATAACCAGTAAGTTTTTCGAAGTTATGACTCCAATTCAGCTATTGGTTGTTTCTGTAGTGATAGATCAAGCACAAATGACAATAAATGCAATCATTTTTGGTATAAAGTTTATACAGATTGTTGCTTTGCTCTGGTAAAGCTGGGTTTTGGTGGATATCATGTGCTAGTAATCTTATCATGTTTCCCTGCCTAGCAACAGTTTTTTCTTCTTCTTATCAATAATATTCTCCCCACATCCCCTCGAAGATATCTCTTAACTAATTGAGTTATGCTTAAGTTTACCATCTCTTGTAAAGTCTCC TAATTTTTGGGTGGTTTTTTTAATTAAAAAAAGAGTTTGCCCTAATTTGCTCATCGTGAATCTGTGCCTTTCCAACTCTCTCTCGAAATCAATCTTCATCTCTCATTGCTTAATACAATCCACTGGACCACCGCCCTCACGGCGTCGCACAACGTCAATTCCGGCCGCTTTCGATTCTTTTGCTTATCTCCCTTGGACTGCGTATCAGATTTGAGTTAGAGGCAATCAACAGACAGCTATGGCAGAAGAGGCAAAAGACCCTTTCAAGGGAGTCGATTGGAAAGCCGTGGGTGGCGATATGCAGAAAGATCCCAGCTCTATAAACATTTTAAAGAAAAGGCGTCCAACAAAAGTTAGGCAAATTCCAGAGTATTATTTTCTTCCTAGAAGATCCCTTCCCTCGGTCCTTGCATTCTATGGGGCGTGTATTGCAGGTGGAATTGGAGCTGGGATGCTGGTGGAGATATGGATTAAGGATAAAGTTAAAAAGGATGGAGGTGTGGTCTGGGAGTTTGACAAGTAGAGTACAGAAGTATGAAGTTGTAATAAGATCATCCAGTTCTGGGTTTTTGTTTTGTTGTCAATTCTTAGTTTTGGCACATATAAAGGAAAACATCTTTTATTGTCACTGTGAAGTTGTACAAAAATTGGAAGCAATAACCAGTAAGTTTTTCGAAGTTATGACTCCAATTCAGCTATTGGTTGTTTCTGTAGTGATAGATCAAGCACAAATGACAATAAATGCAATCATTTTTGGTATAAAGTTTATACAGATTGTTGCTTTGCTCTGGTAAAGCTGGGTTTTGGTGGATATCATGTGCTAGTAATCTTATCATGTTTCCCTGCCTAGCAACAGTTTTTTCTTCTTCTTATCAATAATATTCTCCCCACATCCCCTCGAAGATATCTCTTAACTAATTGAGTTATGCTTAAGTTTACCATCTCTTGTAAAGTCTCC ATGGCAGAAGAGGCAAAAGACCCTTTCAAGGGAGTCGATTGGAAAGCCGTGGGTGGCGATATGCAGAAAGATCCCAGCTCTATAAACATTTTAAAGAAAAGGCGTCCAACAAAAGTTAGGCAAATTCCAGAGTATTATTTTCTTCCTAGAAGATCCCTTCCCTCGGTCCTTGCATTCTATGGGGCGTGTATTGCAGGTGGAATTGGAGCTGGGATGCTGGTGGAGATATGGATTAAGGATAAAGTTAAAAAGGATGGAGGTGTGGTCTGGGAGTTTGACAAGTAG MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFYGACIAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK
BLAST of Carg20905 vs. NCBI nr
Match: XP_022942020.1 (uncharacterized protein LOC111447184 [Cucurbita moschata]) HSP 1 Score: 196.8 bits (499), Expect = 3.2e-47 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of Carg20905 vs. NCBI nr
Match: XP_023522177.1 (uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 194.9 bits (494), Expect = 1.2e-46 Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of Carg20905 vs. NCBI nr
Match: XP_022975548.1 (uncharacterized protein LOC111475080 [Cucurbita maxima]) HSP 1 Score: 193.7 bits (491), Expect = 2.7e-46 Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of Carg20905 vs. NCBI nr
Match: XP_023915908.1 (uncharacterized protein LOC112027472 [Quercus suber] >POF25645.1 hypothetical protein CFP56_17904 [Quercus suber]) HSP 1 Score: 163.7 bits (413), Expect = 3.0e-37 Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of Carg20905 vs. NCBI nr
Match: PON34491.1 (krueppel-like factor [Parasponia andersonii] >PON52087.1 krueppel-like factor [Trema orientalis]) HSP 1 Score: 160.2 bits (404), Expect = 3.4e-36 Identity = 71/93 (76.34%), Postives = 84/93 (90.32%), Query Frame = 0
BLAST of Carg20905 vs. TAIR10
Match: AT5G16950.1 (unknown protein) HSP 1 Score: 93.2 bits (230), Expect = 9.2e-20 Identity = 46/97 (47.42%), Postives = 62/97 (63.92%), Query Frame = 0
BLAST of Carg20905 vs. TrEMBL
Match: tr|A0A2P4N7B9|A0A2P4N7B9_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_17904 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.0e-37 Identity = 74/92 (80.43%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of Carg20905 vs. TrEMBL
Match: tr|A0A2P5BTF0|A0A2P5BTF0_9ROSA (Krueppel-like factor OS=Trema orientalis OX=63057 GN=TorRG33x02_309280 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.2e-36 Identity = 71/93 (76.34%), Postives = 84/93 (90.32%), Query Frame = 0
BLAST of Carg20905 vs. TrEMBL
Match: tr|A0A2P5AD68|A0A2P5AD68_PARAD (Krueppel-like factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_344140 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 2.2e-36 Identity = 71/93 (76.34%), Postives = 84/93 (90.32%), Query Frame = 0
BLAST of Carg20905 vs. TrEMBL
Match: tr|A0A2N9IUI6|A0A2N9IUI6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56939 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 2.9e-36 Identity = 72/92 (78.26%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Carg20905 vs. TrEMBL
Match: tr|A0A2I0IMP0|A0A2I0IMP0_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_034658 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 3.8e-36 Identity = 72/92 (78.26%), Postives = 81/92 (88.04%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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