ClCG05G000700 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G000700
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Histone acetyltransferase type B subunit
Location	CG_Chr05 : 801156 .. 804133 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAATTTTATCATAAAAATGAAACAAAATCCATCGGAGCTTTGGCTTCTTCTAAACCCTATTCGTCCAGCCACCTCCGCCCTCCCATTACCGGCCACTGCCCTTCCCGCCGCACGCCGCTGTCGCTCCAGAGCGTATATTTTCCTATTTCGTCTACCTGCCTCGATCTGGTACGATTGAAGCTTTAGTTAGTTTTCAATTCATTTCTATGATTTATGCTATCTCAATCTTTACCATTCAACTCAACTTTTACTCTTCGCAGTCGTCCCCCTTCCTCGATTTCTTTGATTTATACTATCCCATCTACAACTTCTTCCTACCTTTCTTAGCTATCATTTACATGATGTTTTGGTTTGTGTTGGGTTTATGCAATGATTTAAATTAGGTCTAATTTTTTGTTCTGTCTAGAACTGGACTTCGATTGGAAAAAGAGATTCTTAGAAATTAGGGTTAAATGCTAAAAGATACGTAAGCAAATAAAAACTGAAAAATGGGCTTAAATTATTTCAAACTCAGGTTTTGCTTCTCATCCTCTGTTCAGTAGCATTACTTCATAGCTTCTTCGGTTGGTCCATTTTCTTCCTAGTAATATCCTTAAACTGCTTCACTTTTCCTTCAATTGTAAAGCTTCTCAATGCTGAAGCTAGGATTATTTGCAATAATTTTATAAGAGCTTTTCATTGGACAGTGGACACTTTAGTTGGGAAGAAACTATGGAATTTTTAGGAGTGGGTGTTTTTTTGTGGTGGGAGCACATTATCTTTTTATGGCTCTATTTTGATGCAGATTATTGAACCTTTTCTTCATATTGTAGGTTATCTTCTCTTTGAGCTATTTCAGGTTTCCTTATAATTCAATTCCTTTAGATAGGTTGAGGCTTTCATATCAAGCTTTTTGCACATTTCATACTTATGAATCGCTTTCTTATGAAAAAAAAATAATTTGAACTTTTTATGTACTGTTTGGATTTGGACAGAAATGATTTCAAATGACAGGATTTGAAATGAGGAAATGATTTCATATTGCTAAATGCATTTGGAACCAAACTGGCTTGAAATCACCACAATTAAATGTTCTTGTTTGGATAGCTATTATAAATGAAAACAAAGGAAAGTGTGACATTTTACCCGAGGACTTCTATTAATATTATGTAATACTTTAAAAGTAAAAAATAATGTCAATTACATATAAATATGAAAACATATCATTGAATCAAAGCAAAGCAACTTATTGAATTAAAACTCAAATGATCTACATGGTCAAAAAGGGAAAAAAAAAAAAAAAAAAAAACTAGAAAGTCTAAAAATTCAAATAAAACAATTATTTTACAGTTACATCATTATAACCATATATAAAAAAGGGTTGTTTTCTGAACCAACTTATTTACAAATGTATAGACTACTATCATCTATTATTATTCGATAGATTTCTATCAATGTCTATCGTTGTCTATCCTTGATAGACACTCACATTTTGTTTTATTTGAAAATATTTCCAGCAGTTTTGACTTTTGAAACAATTACCCTATAAATTAAATATATATTAAGAAAACGAACATTACCTTCCCCATAATTTTATTATATAGTTTTATCTTGTTTTTTAAAAAAGAAAGTAAACCCTATGCCTAAGACTTTGGTTCTTTCTTCACCATTGTTCTTTTTCTCTATTTTTCGGTTCTCCCCTTTACCATAGGCATCTATGATACCGCCGCACATCACCACCAACTCATTTACAGTGAGACAAGTTTGTTTCTCCATTATTCTTCCCCATTTCTTCTCTATCACTCTCTCACGCCCATATTTCATCCTTAGCTCCCACACATTAATCCTCCCAATTTCCCTCTTTGGTATGTTCTCTCTTCTGTGTGTATTTTAGATGGAAAATTTGTTGGATCAAAACAAGATTTCAAATCACTATGGATTTAAATTTTATTTTTATTATTCATTACAAACGCAGGAAACAATTTAAATCTATTTTGATTTGAACTCTTTTCAAAGCCATTGGTTCCAACTTCCAAGCCGAGTGTTATTCTTTTTGTTTTAGGTTGAAGGCTGTAAGAGTTGAGTTAGAGGCAACCTAGAGATAGCGATGGGAGAAGAGCAAAAAGACCCTTTTAAGGGAGTGGACTGGAAAGCCGTGGGTGGGGATATGCAGAAAAATCCCAGCGCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGCCATTGCATTCTATGGGGCCTGTATTGCAGGTGGAATTGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAGTTAAAAGTAAGTTCTGAATATGGGTCTAGATTTTTTCAATTACTGTTTGATTTCACACTTTTAAACACGATTTGAATAACCATGAAATTTTATTTTAAAAGATTAAAAGCTTTTGAAAGTGACAAAAGTAATTTTAACTATTTTAAGCTTAACGTCTGCGTAAGCCTGCCAATTTCTACCAATTTCTTTTTTGATATCTCTCTGCTTTTCTTTTTAATGTATATCTATGAGAGATAAGATTGATTGATTTTTAATTTTCCTTCCTGATGTGTTCTTAAGAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAGAGTACAAGAGTAGTATGAAGTTGTATTATTCAAGCAGAACAAGATCATCAAGTTGCTGGGTTTCGTTTTATTGTTAATCCTAGTTTTGGCTCTCATAAGTGAACATCTTTTTTAATGCCTCTAGGAAGTTGTACAAAATTTGGAACCAATAACTGTTTTTTTCCCCTGAAGTTATAACCTCCAATTGAGCTATTGGTTGTTTCTCTAATTATAGATCAATCGCAACTGACATTAAGTGCGATCATTTTTGGTATAAACCTTGCGCAGATGGCCGCTTTCCTCTGTTAAAGCTGGGTTGTAATACTCTACTGAAACCAAACTTTAATTTGT

mRNA sequence

AAATAAATTTTATCATAAAAATGAAACAAAATCCATCGGAGCTTTGGCTTCTTCTAAACCCTATTCGTCCAGCCACCTCCGCCCTCCCATTACCGGCCACTGCCCTTCCCGCCGCACGCCGCTGTCGCTCCAGAGCGTATATTTTCCTATTTCGTCTACCTGCCTCGATCTGGTTGAAGGCTGTAAGAGTTGAGTTAGAGGCAACCTAGAGATAGCGATGGGAGAAGAGCAAAAAGACCCTTTTAAGGGAGTGGACTGGAAAGCCGTGGGTGGGGATATGCAGAAAAATCCCAGCGCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGCCATTGCATTCTATGGGGCCTGTATTGCAGGTGGAATTGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAGTTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAGAGTACAAGAGTAGTATGAAGTTGTATTATTCAAGCAGAACAAGATCATCAAGTTGCTGGGTTTCGTTTTATTGTTAATCCTAGTTTTGGCTCTCATAAGTGAACATCTTTTTTAATGCCTCTAGGAAGTTGTACAAAATTTGGAACCAATAACTGTTTTTTTCCCCTGAAGTTATAACCTCCAATTGAGCTATTGGTTGTTTCTCTAATTATAGATCAATCGCAACTGACATTAAGTGCGATCATTTTTGGTATAAACCTTGCGCAGATGGCCGCTTTCCTCTGTTAAAGCTGGGTTGTAATACTCTACTGAAACCAAACTTTAATTTGT

Coding sequence (CDS)

ATGGGAGAAGAGCAAAAAGACCCTTTTAAGGGAGTGGACTGGAAAGCCGTGGGTGGGGATATGCAGAAAAATCCCAGCGCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGCCATTGCATTCTATGGGGCCTGTATTGCAGGTGGAATTGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAGTTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAG

Protein sequence

MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK

Homology

[Close]

BLAST of ClCG05G000700 vs. TrEMBL
Match: A0A0A0L8I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119440 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-44
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 1


Query: 2   GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
           G EQKDP KGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYG
Sbjct: 11  GVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYG 70

Query: 62  ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
           ACIAGGIGAGMLVEIWINDK+KKDGGVIWEFDK
Sbjct: 71  ACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

[Close]

BLAST of ClCG05G000700 vs. TrEMBL
Match: B9SBE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716680 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 9.9e-39
Identity = 78/94 (82.98%), Postives = 87/94 (92.55%), Query Frame = 1


Query: 3  EEQKDPFKGVDWKAVGGDMQKNPSA--TNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 62
          EE KDPFKGVDWKA+GG++QK+PSA   ++I+KR P KIRQIPDYYFLPRRSLPSAIAFY
Sbjct: 4  EEPKDPFKGVDWKAIGGELQKDPSAGAKSVIRKRLPKKIRQIPDYYFLPRRSLPSAIAFY 63

Query: 63 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          GACIAGGIGAGML+EIWIN KVK+DGGVIWEFDK
Sbjct: 64 GACIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

[Close]

BLAST of ClCG05G000700 vs. TrEMBL
Match: A0A067JX58_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14238 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-38
Identity = 77/94 (81.91%), Postives = 86/94 (91.49%), Query Frame = 1


Query: 3  EEQKDPFKGVDWKAVGGDMQKNPSATN--IIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 62
          EE KDPFKGVDWKA+GG++QK+PSA+   +IKKR P K+RQIPDYYFLPRRSLPSAIAFY
Sbjct: 4  EEPKDPFKGVDWKAIGGELQKDPSASAKPVIKKRLPKKVRQIPDYYFLPRRSLPSAIAFY 63

Query: 63 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          G CIAGGIGAGML+EIWIN KVK+DGGVIWEFDK
Sbjct: 64 GGCIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

[Close]

BLAST of ClCG05G000700 vs. TrEMBL
Match: A0A067KCR1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12070 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-37
Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = 1


Query: 3  EEQKDPFKGVDWKAVGGDMQKNPSA--TNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 62
          EE KDP KGVDWKA+G ++QK+PSA    IIKKR P KIRQIPDYYFLPRRSLPSAIAFY
Sbjct: 4  EEPKDPLKGVDWKAIGSELQKDPSAGAKQIIKKRLPKKIRQIPDYYFLPRRSLPSAIAFY 63

Query: 63 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          GACIAGGIGAGML+EIWIN KVK+DGGVIWEFDK
Sbjct: 64 GACIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

[Close]

BLAST of ClCG05G000700 vs. TrEMBL
Match: A0A059CIH1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02385 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.5e-36
Identity = 74/93 (79.57%), Postives = 83/93 (89.25%), Query Frame = 1


Query: 3  EEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGA 62
          EE KDPFKGVDWKAVG D+QK+P+A  I+KKR P KIRQIP+YYFLPRRSL S +AFYGA
Sbjct: 4  EESKDPFKGVDWKAVGSDIQKDPAAKPIVKKRLPKKIRQIPEYYFLPRRSLSSTLAFYGA 63

Query: 63 CIAGGIGAGMLVEIWINDKVKKD-GGVIWEFDK 95
          CIAGGIGAGML+EIWIN KVK+D GGV+WEFDK
Sbjct: 64 CIAGGIGAGMLLEIWINKKVKEDGGGVVWEFDK 96

[Close]

BLAST of ClCG05G000700 vs. TAIR10
Match: AT5G16950.1 (AT5G16950.1 unknown protein)

HSP 1 Score: 95.1 bits (235), Expect = 2.4e-20
Identity = 46/97 (47.42%), Postives = 61/97 (62.89%), Query Frame = 1


Query: 3  EEQKDPFKGVDWKAVGGDMQKNPSATNI-----IKKRRPTKIRQIPDYYFLPRRSLPSAI 62
          E  KDP+KG +W     +  K P+ + +      +K+ P  +    + YFLPR+  P A+
Sbjct: 4  EGAKDPWKGEEW-GTENEKTKKPTTSGVKTVTRARKQIPRGLEDKYEAYFLPRKPWPRAL 63

Query: 63 AFYGACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          A+YG+ I GGIGAGM++E WIN KVK+DGGVIWEFDK
Sbjct: 64 AYYGSFILGGIGAGMVIEAWINKKVKEDGGVIWEFDK 99

[Close]

BLAST of ClCG05G000700 vs. NCBI nr
Match: gi|449432034|ref|XP_004133805.1| (PREDICTED: uncharacterized protein LOC101207877 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 1.7e-44
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 1


Query: 2   GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
           G EQKDP KGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYG
Sbjct: 11  GVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYG 70

Query: 62  ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
           ACIAGGIGAGMLVEIWINDK+KKDGGVIWEFDK
Sbjct: 71  ACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

[Close]

BLAST of ClCG05G000700 vs. NCBI nr
Match: gi|659074925|ref|XP_008437869.1| (PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo])

HSP 1 Score: 183.7 bits (465), Expect = 1.5e-43
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 1


Query: 2   GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
           G EQKDPFKGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRR LP  +AFYG
Sbjct: 11  GVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 70

Query: 62  ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
           ACIAGGIGAGMLVE+WINDK+KKDGGVIWEFDK
Sbjct: 71  ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103

[Close]

BLAST of ClCG05G000700 vs. NCBI nr
Match: gi|255564645|ref|XP_002523317.1| (PREDICTED: uncharacterized protein LOC8263493 [Ricinus communis])

HSP 1 Score: 167.2 bits (422), Expect = 1.4e-38
Identity = 78/94 (82.98%), Postives = 87/94 (92.55%), Query Frame = 1


Query: 3  EEQKDPFKGVDWKAVGGDMQKNPSA--TNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 62
          EE KDPFKGVDWKA+GG++QK+PSA   ++I+KR P KIRQIPDYYFLPRRSLPSAIAFY
Sbjct: 4  EEPKDPFKGVDWKAIGGELQKDPSAGAKSVIRKRLPKKIRQIPDYYFLPRRSLPSAIAFY 63

Query: 63 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          GACIAGGIGAGML+EIWIN KVK+DGGVIWEFDK
Sbjct: 64 GACIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

[Close]

BLAST of ClCG05G000700 vs. NCBI nr
Match: gi|802694456|ref|XP_012083179.1| (PREDICTED: uncharacterized protein LOC105642827 [Jatropha curcas])

HSP 1 Score: 166.0 bits (419), Expect = 3.1e-38
Identity = 77/94 (81.91%), Postives = 86/94 (91.49%), Query Frame = 1


Query: 3  EEQKDPFKGVDWKAVGGDMQKNPSATN--IIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 62
          EE KDPFKGVDWKA+GG++QK+PSA+   +IKKR P K+RQIPDYYFLPRRSLPSAIAFY
Sbjct: 4  EEPKDPFKGVDWKAIGGELQKDPSASAKPVIKKRLPKKVRQIPDYYFLPRRSLPSAIAFY 63

Query: 63 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          G CIAGGIGAGML+EIWIN KVK+DGGVIWEFDK
Sbjct: 64 GGCIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

[Close]

BLAST of ClCG05G000700 vs. NCBI nr
Match: gi|802635256|ref|XP_012078200.1| (PREDICTED: uncharacterized protein LOC105638912 [Jatropha curcas])

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-37
Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = 1


Query: 3  EEQKDPFKGVDWKAVGGDMQKNPSA--TNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 62
          EE KDP KGVDWKA+G ++QK+PSA    IIKKR P KIRQIPDYYFLPRRSLPSAIAFY
Sbjct: 4  EEPKDPLKGVDWKAIGSELQKDPSAGAKQIIKKRLPKKIRQIPDYYFLPRRSLPSAIAFY 63

Query: 63 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
          GACIAGGIGAGML+EIWIN KVK+DGGVIWEFDK
Sbjct: 64 GACIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

The following BLAST results are available for this feature:

BLAST of ClCG05G000700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8I7_CUCSA	1.2e-44	92.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119440 PE=4 SV=1	[more]
B9SBE8_RICCO	9.9e-39	82.98	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716680 PE=4 SV=1	[more]
A0A067JX58_JATCU	2.2e-38	81.91	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14238 PE=4 SV=1	[more]
A0A067KCR1_JATCU	1.1e-37	82.98	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12070 PE=4 SV=1	[more]
A0A059CIH1_EUCGR	3.5e-36	79.57	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02385 PE=4 SV=1	[more]

BLAST of ClCG05G000700 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16950.1	2.4e-20	47.42	unknown protein	[more]

BLAST of ClCG05G000700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432034\|ref\|XP_004133805.1\|	1.7e-44	92.47	PREDICTED: uncharacterized protein LOC101207877 [Cucumis sativus]	[more]
gi\|659074925\|ref\|XP_008437869.1\|	1.5e-43	90.32	PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo]	[more]
gi\|255564645\|ref\|XP_002523317.1\|	1.4e-38	82.98	PREDICTED: uncharacterized protein LOC8263493 [Ricinus communis]	[more]
gi\|802694456\|ref\|XP_012083179.1\|	3.1e-38	81.91	PREDICTED: uncharacterized protein LOC105642827 [Jatropha curcas]	[more]
gi\|802635256\|ref\|XP_012078200.1\|	1.6e-37	82.98	PREDICTED: uncharacterized protein LOC105638912 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G000700.1	ClCG05G000700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36797	FAMILY NOT NAMED	coord: 1..94 score: 3.4
None	No IPR available	PANTHER	PTHR36797:SF1	SUBFAMILY NOT NAMED	coord: 1..94 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G000700	Csa3G119440	Cucumber (Chinese Long) v2	cuwcgB222
ClCG05G000700	MELO3C006010	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G000700	Cla021142	Watermelon (97103) v1	wcgwmB286
ClCG05G000700	Cla97C05G080810	Watermelon (97103) v2	wcgwmbB229
ClCG05G000700	CSPI03G07800	Wild cucumber (PI 183967)	cpiwcgB226
ClCG05G000700	Cucsa.259360	Cucumber (Gy14) v1	cgywcgB451
ClCG05G000700	CmaCh06G009750	Cucurbita maxima (Rimu)	cmawcgB742
ClCG05G000700	CmaCh00G005590	Cucurbita maxima (Rimu)	cmawcgB006
ClCG05G000700	CmoCh06G010290	Cucurbita moschata (Rifu)	cmowcgB743
ClCG05G000700	Lsi05G021360	Bottle gourd (USVL1VR-Ls)	lsiwcgB335
ClCG05G000700	Cp4.1LG08g00710	Cucurbita pepo (Zucchini)	cpewcgB787
ClCG05G000700	CsGy3G007950	Cucumber (Gy14) v2	cgybwcgB203
ClCG05G000700	MELO3C006010.2	Melon (DHL92) v3.6.1	medwcgB416
ClCG05G000700	Carg20905	Silver-seed gourd	carwcgB0968
ClCG05G000700	CsaV3_3G007920	Cucumber (Chinese Long) v3	cucwcgB225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G000700	Bottle gourd (USVL1VR-Ls)	lsiwcgB018
ClCG05G000700	Cucumber (Gy14) v2	cgybwcgB357
ClCG05G000700	Melon (DHL92) v3.6.1	medwcgB028
ClCG05G000700	Silver-seed gourd	carwcgB0122
ClCG05G000700	Silver-seed gourd	carwcgB0964
ClCG05G000700	Cucumber (Chinese Long) v3	cucwcgB413
ClCG05G000700	Watermelon (97103) v2	wcgwmbB210
ClCG05G000700	Wax gourd	wcgwgoB420
ClCG05G000700	Wax gourd	wcgwgoB439
ClCG05G000700	Watermelon (Charleston Gray)	wcgwcgB094
ClCG05G000700	Cucumber (Gy14) v1	cgywcgB377
ClCG05G000700	Cucurbita maxima (Rimu)	cmawcgB233
ClCG05G000700	Cucurbita maxima (Rimu)	cmawcgB295
ClCG05G000700	Cucurbita maxima (Rimu)	cmawcgB563
ClCG05G000700	Cucurbita maxima (Rimu)	cmawcgB738
ClCG05G000700	Cucurbita moschata (Rifu)	cmowcgB219
ClCG05G000700	Cucurbita moschata (Rifu)	cmowcgB560
ClCG05G000700	Wild cucumber (PI 183967)	cpiwcgB410
ClCG05G000700	Cucumber (Chinese Long) v2	cuwcgB392
ClCG05G000700	Melon (DHL92) v3.5.1	mewcgB030
ClCG05G000700	Watermelon (97103) v1	wcgwmB295
ClCG05G000700	Cucurbita pepo (Zucchini)	cpewcgB559
ClCG05G000700	Cucurbita pepo (Zucchini)	cpewcgB677