Csa3G119440 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAATCTTTCAAGACTTAGCAAAATCGTCATAAATTCCCTTTAACTTTTCACAAAGTTCTCTTGGTAAAATGACTAAATAATATGTCTAAGGAGGATGCATTAGATTTTCTGTAACCCTATTTCACGACCAGCCACCCCCGCCTTCCCATTACCGGTCACTGCACCCCTTCCCGCCGTACGCCGCTGCCGCTCCACAGCATATCTTTTCCTATTTCATGTACCTGTGTCGTCTCGAACTGGTACGATTGAAGTTAGTTAGTTTTCAATTCATTTATATGATTTATATGCTATCTCAATCTTTACCATTCAACTCTATTTTTAGTTTTTGCAATCGTCCTTCTTCCTCGATTTCTTTGATTTGGGTTATCTCATCGACAATTTTTTTTCCTACTTTTCTTAGCTATCATTTACACGATGTTTTGGTTTACGCAATGGTTTGGTTTAAGTCTAAATTTTTGTTCTGCCATGGAATGACGGACTTCGATTGGAGAAAGTTCGCGAAAATTAGGGTTAAATGCTAAAGATATGTAAGCATCAAAACTGAAAAATGGGCTTGAATTCTTAGCGAAATGACTCATGATTGCCTTTTCATCCTCGCTTTACTTTTCCAGTATTGTTTTTCGATTGGTGCATTGTTCTTCCTAGTAATATACTTAACCTTATTCTCTCGATAAACCTTCTCAATGCTTAAGATAAGATTATTTGAATAAATTTATAAGATATTTTCATTGGACTTTTTAGTTCGAAAGAAACAATCGAATTTTTAGGAGTGGGTGTTTTTTGTGTTGGGTGCATCTCACCTTTTTATGGCTCTATTTTGATGAGGATTATCGAACTGTAGTTATCTTCTCTTTGAGCTAGTTTAAAGTTTTTCTTATAATTCGATTCATTTAGACTAGCTGAGGCTTCCGGATCATTCTTCTTTACATATGTCATACTTTTAGCGAATCGGGGAAAAAAGTAATTTGAACATTTTATGTGTTGTTTGGATTTGGAGGATTTAAAACGAGGAAATGAGTTCATTTTCCTAATTGCATTTGGAACCAAACTGGCTTGAAATCACCACAATTAAATCTTCTTGTTTGTGTAGCTATGGGAAATGAAAAGAAAGTGAGACATTGTACCCGAGAACTTTCATTAATAAGTCAAATATCATTTAATAAAAAACAAATCAACTAATTAAATTAAAACTCGAATGATCTACATTGTCAAAAAGAAAGAACTTACAAAAAGTCTAAAAGTTCAGAACCATTATTTTACAATTATATCATCTTTATAACCATATATAAACTAAACAATTGTTTGTAAATTTCTAAATCCTTTCACATCTGGTAGTTTCAAATAGAGAGTTATTTTTGCTTTAGGTTTGAAGGGCGTGAGAGTTGAGTTATAAGCAACCTAGAGATAGCTATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTGAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGTTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGAATCGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAATTAAAAGTAAGTTCTGAATATAGATCTTTACATATTCAAAATCTTGTTGTAAATCGATTAATGTTCGATTTCACACTTTTACACATGGTTTTAATAACCATTGAATTTTATTTTAAAAGAGTAAAAACATGTTTAGTACTGATTTTGAATATGACGAAAGGTATTTTTAGCTAGTTTAAGCTATAAATCTTCATGCTCCTGGAAGTATCTTTTCTCACATCTCTCTTTTTTTCTGATGTGTTCTTGTAGAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAGAGTACAAGAGTAATATGAAGTTGCATTATTCAAACAGAACAAGATCGTCCAGTTGCTGGGTTTTGTTTTATTGTTAATCCTAGTTTTGGAACATGTAAGCGAACATCTTTTAATGCCTCAATGAAGCTGTACAAAAATTGGAAGCAATAATTGTAAGTTTGTTTTTTGTTTTTGTTTTTTTCAAAGCCATACTTAACCTCCAATTCAGTTATTGGCAGTTTGTTTCTCTAATTATTGATCAAGCACAAGTGATATTAAATGCACTCACTTTT ATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTGAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGTTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGAATCGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAATTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAG ATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTGAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGTTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGAATCGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAATTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAG MGVEQNDPLKGVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYGACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK*
BLAST of Csa3G119440 vs. TrEMBL
Match: A0A0A0L8I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119440 PE=4 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 7.0e-54 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of Csa3G119440 vs. TrEMBL
Match: A0A067KCR1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12070 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 7.8e-37 Identity = 75/93 (80.65%), Postives = 83/93 (89.25%), Query Frame = 1
BLAST of Csa3G119440 vs. TrEMBL
Match: B9SBE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716680 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.0e-36 Identity = 73/93 (78.49%), Postives = 84/93 (90.32%), Query Frame = 1
BLAST of Csa3G119440 vs. TrEMBL
Match: A0A067JX58_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14238 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 2.3e-36 Identity = 72/93 (77.42%), Postives = 83/93 (89.25%), Query Frame = 1
BLAST of Csa3G119440 vs. TrEMBL
Match: B9GK55_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s11560g PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 4.3e-35 Identity = 70/93 (75.27%), Postives = 82/93 (88.17%), Query Frame = 1
BLAST of Csa3G119440 vs. TAIR10
Match: AT5G16950.1 (AT5G16950.1 unknown protein) HSP 1 Score: 91.3 bits (225), Expect = 3.8e-19 Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 1
BLAST of Csa3G119440 vs. NCBI nr
Match: gi|449432034|ref|XP_004133805.1| (PREDICTED: uncharacterized protein LOC101207877 [Cucumis sativus]) HSP 1 Score: 217.6 bits (553), Expect = 1.0e-53 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of Csa3G119440 vs. NCBI nr
Match: gi|659074925|ref|XP_008437869.1| (PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo]) HSP 1 Score: 210.7 bits (535), Expect = 1.2e-51 Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 1
BLAST of Csa3G119440 vs. NCBI nr
Match: gi|802635256|ref|XP_012078200.1| (PREDICTED: uncharacterized protein LOC105638912 [Jatropha curcas]) HSP 1 Score: 161.0 bits (406), Expect = 1.1e-36 Identity = 75/93 (80.65%), Postives = 83/93 (89.25%), Query Frame = 1
BLAST of Csa3G119440 vs. NCBI nr
Match: gi|255564645|ref|XP_002523317.1| (PREDICTED: uncharacterized protein LOC8263493 [Ricinus communis]) HSP 1 Score: 160.6 bits (405), Expect = 1.5e-36 Identity = 73/93 (78.49%), Postives = 84/93 (90.32%), Query Frame = 1
BLAST of Csa3G119440 vs. NCBI nr
Match: gi|802694456|ref|XP_012083179.1| (PREDICTED: uncharacterized protein LOC105642827 [Jatropha curcas]) HSP 1 Score: 159.5 bits (402), Expect = 3.3e-36 Identity = 72/93 (77.42%), Postives = 83/93 (89.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |