CsaV3_3G007920 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTGGAGGTTCCATAGCATAAAAAATTATACATATATCAATGAGTTATAAGGATAGAATTAATTTCTCATTGTGCTATTTATTCTCATAATCTTTCAAGACTTAGCAAAATCGTCATAAATTCCCTTTAACTTTTCACAAAGTTCTCTTGGTAAAATGACTAAATAATATGTCTAAGGAGGATGCATTAGATTTTCTGTAACCCTATTTCACGACCAGCCACCCCCGCCTTCCCATTACCGGTCACTGCACCCCTTCCCGCCGTACGCCGCTGCCGCTCCACAGCATATCTTTTCCTATTTCATGTACCTGTGTCGTCTCGAACTGGTACGATTGAAGTTAGTTAGTTTTCAATTCATTTATATGATTTATATGCTATCTCAATCTTTACCATTCAACTCTATTTTTAGTTTTTGCAATCGTCCTTCTTCCTCGATTTCTTTGATTTGGGTTATCTCATCGACAATTTTTTTTCCTACTTTTCTTAGCTATCATTTACACGATGTTTTGGTTTACGCAATGGTTTGGTTTAAGTCTAAATTTTTGTTCTGCCATGGAATGACGGACTTCGATTGGAGAAAGTTCGCGAAAATTAGGGTTAAATGCTAAAGATATGTAAGCATCAAAACTGAAAAATGGGCTTGAATTCTTAGCGAAATGACTCATGATTGCCTTTTCATCCTCGCTTTACTTTTCCAGTATTGTTTTTCGATTGGTGCATTGTTCTTCCTAGTAATATACTTAACCTTATTCTCTCGATAAACCTTCTCAATGCTTAAGATAAGATTATTTGAATAAATTTATAAGATATTTTCATTGGACTTTTTAGTTCGAAAGAAACAATCGAATTTTTAGGAGTGGGTGTTTTTTGTGTTGGGTGCATCTCACCTTTTTATGGCTCTATTTTGATGAGGATTATCGAACTGTAGTTATCTTCTCTTTGAGCTAGTTTAAAGTTTTTCTTATAATTCGATTCATTTAGACTAGCTGAGGCTTCCGGATCATTCTTCTTTACATATGTCATACTTTTAGCGAATCGGGGAAAAAAGTAATTTGAACATTTTATGTGTTGTTTGGATTTGGAGGATTTAAAACGAGGAAATGAGTTCATTTTCCTAATTGCATTTGGAACCAAACTGGCTTGAAATCACCACAATTAAATCTTCTTGTTTGTGTAGCTATGGGAAATGAAAAGAAAGTGAGACATTGTACCCGAGAACTTTCATTAATAAGTCAAATATCATTTAATAAAAAACAAATCAACTAATTAAATTAAAACTCGAATGATCTACATTGTCAAAAAGAAAGAACTTACAAAAAGTCTAAAAGTTCAGAACCATTATTTTACAATTATATCATCTTTATAACCATATATAAACTAAACAATTGTTTGTAAATTTCTAAATCCTTTCACATCTGGTAGTTTCAAATAGAGAGTTATTTTTGCTTTAGGTTTGAAGGGCGTGAGAGTTGAGTTATAAGCAACCTAGAGATAGCTATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTGAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGTTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGAATCGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAATTAAAAGTAAGTTCTGAATATAGATCTTTACATATTCAAAATCTTGTTGTAAATCGATTAATGTTCGATTTCACACTTTTACACATGGTTTTAATAACCATTGAATTTTATTTTAAAAGAGTAAAAACATGTTTAGTACTGATTTTGAATATGACGAAAGGTATTTTTAGCTAGTTTAAGCTATAAATCTTCATGCTCCTGGAAGTATCTTTTCTCACATCTCTCTTTTTTTCTGATGTGTTCTTGTAGAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAGAGTACAAGAGTAATATGAAGTTGCATTATTCAAACAGAACAAGATCGTCCAGTTGCTGGGTTTTGTTTTATTGTTAATCCTAGTTTTGGAACATGTAAGCGAACATCTTTTAATGCCTCAATGAAGCTGTACAAAAATTGGAAGCAATAATTGTAAGTTTGTTTTTTGTTTTTGTTTTTTTCAAAGCCATACTTAACCTCCAATTCAGTTATTGGCAGTTTGTTTCTCTAATTATTGATCAAGCACAAGTGATATTAAATGCACTCACTTTTGGTAAACCTTGCACAGATTGTTGTTTTAATCTGCTAAAGTTGGGTTTAGGTGTGATATTGCTCTAGGTAATAAGCCTCCTCTGATGTGTAATACCCTACTGAATTTAAAACAGACATTATTTTTTTG ATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTGAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGTTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGAATCGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAATTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAG ATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTGAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGTTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGAATCGGTGCTGGTATGCTGGTGGAGATCTGGATAAATGATAAAATTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAG MGVEQNDPLKGVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYGACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK
BLAST of CsaV3_3G007920 vs. NCBI nr
Match: XP_004133805.1 (PREDICTED: uncharacterized protein LOC101207877 [Cucumis sativus] >KGN56411.1 hypothetical protein Csa_3G119440 [Cucumis sativus]) HSP 1 Score: 183.3 bits (464), Expect = 4.1e-43 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CsaV3_3G007920 vs. NCBI nr
Match: XP_008437869.1 (PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo]) HSP 1 Score: 177.9 bits (450), Expect = 1.7e-41 Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of CsaV3_3G007920 vs. NCBI nr
Match: XP_023522177.1 (uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 160.6 bits (405), Expect = 2.8e-36 Identity = 72/79 (91.14%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of CsaV3_3G007920 vs. NCBI nr
Match: XP_022942020.1 (uncharacterized protein LOC111447184 [Cucurbita moschata]) HSP 1 Score: 158.3 bits (399), Expect = 1.4e-35 Identity = 71/79 (89.87%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of CsaV3_3G007920 vs. NCBI nr
Match: XP_022975548.1 (uncharacterized protein LOC111475080 [Cucurbita maxima]) HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34 Identity = 70/79 (88.61%), Postives = 76/79 (96.20%), Query Frame = 0
BLAST of CsaV3_3G007920 vs. TAIR10
Match: AT5G16950.1 (unknown protein) HSP 1 Score: 82.0 bits (201), Expect = 2.3e-16 Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 0
BLAST of CsaV3_3G007920 vs. TrEMBL
Match: tr|A0A0A0L8I7|A0A0A0L8I7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119440 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.7e-43 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of CsaV3_3G007920 vs. TrEMBL
Match: tr|A0A1S3AV52|A0A1S3AV52_CUCME (uncharacterized protein LOC103483172 OS=Cucumis melo OX=3656 GN=LOC103483172 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41 Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of CsaV3_3G007920 vs. TrEMBL
Match: tr|A0A067KCR1|A0A067KCR1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12070 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.0e-30 Identity = 71/106 (66.98%), Postives = 81/106 (76.42%), Query Frame = 0
BLAST of CsaV3_3G007920 vs. TrEMBL
Match: tr|A0A2P5BTF0|A0A2P5BTF0_9ROSA (Krueppel-like factor OS=Trema orientalis OX=63057 GN=TorRG33x02_309280 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.4e-30 Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 0
BLAST of CsaV3_3G007920 vs. TrEMBL
Match: tr|A0A2P5AD68|A0A2P5AD68_PARAD (Krueppel-like factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_344140 PE=4 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.4e-30 Identity = 64/79 (81.01%), Postives = 71/79 (89.87%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |