MU44962 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU44962
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Transmembrane protein, putative
Location	chr6 : 547700 .. 549790 (+)
Sequence length	661

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ATGCTCCCACCGCGCCCCATCATAGCTTTGATTTAAACCCTATTTCACCACCACCCATCCCCGCCCTCTCACTACCGGTCACTGCACCCCTTTCCGGCGTACGCCGCTGCCGCTGCCGCTCCAGAGCATATATTTTTCTATTTCATGTACCTGCCTTGAACTGGTTGAAGGGCGTGAGAGTTGAGTTAGAAGCAACCTAGAGATAGCTATGGGAGTAGAGCAAAACGACCCTTTGAAGGGAGTAGAGCAAAAAGACCCTTTCAAGGGAGTAGACTGGAAAGCTGTGGGTGGGGATATGCAGAAAGATCCCAGCTCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATCCCAGATTATTATTTTCTTCCTAGAAGACCCCTTCCTTATGTCATGGCATTCTATGGGGCCTGTATTGCTGGTGGTATCGGTGCTGGTATGCTGGTGGAGATGTGGATAAATGATAAAATTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAGAGTACAAGAGTAGTATGAAGTTGGAACAAGATCGTCGTGTTGCTGGGTTTTGTTTTATTGTTAATCTTAGTTATGGAACATGTAATGTAAGTGAACATCTTTTAATGCCTCAATGAAGTTGTACAAAAATTGGAAGCAATG

Library


Library category	ESTs
melon 15d library	1
melon 46d library	1
melon SFTP2 library	1
melon CI library	1
melon HS library	1

Homology

[Close]

BLAST of MU44962 vs. TrEMBL
Match: A0A0A0L8I7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119440 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-43
Identity = 88/103 (85.44%), Postives = 89/103 (86.41%), Query Frame = 2


Query: 209 MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 268
           MGVEQNDPLKGVEQKDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR
Sbjct: 1   MGVEQNDPLKGVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60

Query: 269 PLPYVMAFYXXXXXXXXXXXMLVEMWINDKIKKDGGVIWEFDK 328
            LP VMAFY           MLVE+WINDKIKKDGGVIWEFDK
Sbjct: 61  SLPSVMAFYGACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

Query: 329  388
           
Sbjct: 121  103

Query: 389  448
           
Sbjct: 181  103

Query: 449  508
           
Sbjct: 241  103

Query: 509  518
           
Sbjct: 301  103

[Close]

BLAST of MU44962 vs. TrEMBL
Match: B9GK55_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s11560g PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 63/93 (67.74%), Postives = 72/93 (77.42%), Query Frame = 2


Query: 245 EQKDPFKGVDWKAVGGDMQKDPSSTN--IIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYX 304
           E KDPFKGVDWKA+GG++QKDPS+    IIKKR P KIRQIPDYYFLPR PLP V+AFY 
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSAGTKPIIKKRLPKKIRQIPDYYFLPRLPLPTVIAFYG 64

Query: 305 XXXXXXXXXXMLVEMWINDKIKKDGGVIWEFDK 364
                     ML+EMWIN K+K+DGG+IWEFDK
Sbjct: 65  ACIAGGVGAGMLLEMWINKKVKEDGGIIWEFDK 97

Query: 365  424
           
Sbjct: 125  97

Query: 425  484
           
Sbjct: 185  97

Query: 485  518
           
Sbjct: 245  97

[Close]

BLAST of MU44962 vs. TrEMBL
Match: A0A067JX58_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14238 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-27
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 2


Query: 245 EQKDPFKGVDWKAVGGDMQKDPSSTN--IIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYX 304
           E KDPFKGVDWKA+GG++QKDPS++   +IKKR P K+RQIPDYYFLPRR LP  +AFY 
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSASAKPVIKKRLPKKVRQIPDYYFLPRRSLPSAIAFYG 64

Query: 305 XXXXXXXXXXMLVEMWINDKIKKDGGVIWEFDK 364
                     ML+E+WIN K+K+DGGVIWEFDK
Sbjct: 65  GCIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

Query: 365  424
           
Sbjct: 125  97

Query: 425  484
           
Sbjct: 185  97

Query: 485  518
           
Sbjct: 245  97

[Close]

BLAST of MU44962 vs. TrEMBL
Match: B9SBE8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716680 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.4e-27
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 2


Query: 245 EQKDPFKGVDWKAVGGDMQKDPSS--TNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYX 304
           E KDPFKGVDWKA+GG++QKDPS+   ++I+KR P KIRQIPDYYFLPRR LP  +AFY 
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSAGAKSVIRKRLPKKIRQIPDYYFLPRRSLPSAIAFYG 64

Query: 305 XXXXXXXXXXMLVEMWINDKIKKDGGVIWEFDK 364
                     ML+E+WIN K+K+DGGVIWEFDK
Sbjct: 65  ACIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

Query: 365  424
           
Sbjct: 125  97

Query: 425  484
           
Sbjct: 185  97

Query: 485  518
           
Sbjct: 245  97

[Close]

BLAST of MU44962 vs. TrEMBL
Match: M5WRN2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015708mg PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.0e-27
Identity = 62/91 (68.13%), Postives = 67/91 (73.63%), Query Frame = 2


Query: 245 EQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYXXX 304
           E KDPFKGVDWKAVG DMQKDPS    IKKR P KIRQIPD YFLPRR LPY +AF+   
Sbjct: 74  EPKDPFKGVDWKAVGSDMQKDPSVKPGIKKRLPRKIRQIPDCYFLPRRSLPYNIAFFGAC 133

Query: 305 XXXXXXXXMLVEMWINDKIKKDGGVIWEFDK 364
                   ML+E+WIN K+K DGGVIWEFDK
Sbjct: 134 IAGGIGAGMLLEVWINKKVKDDGGVIWEFDK 164

Query: 365  424
           
Sbjct: 194  164

Query: 425  484
           
Sbjct: 254  164

Query: 485  518
           
Sbjct: 314  164

[Close]

BLAST of MU44962 vs. TAIR10
Match: AT5G16950.1 (AT5G16950.1 unknown protein)

HSP 1 Score: 75.5 bits (184), Expect = 4.6e-14
Identity = 36/94 (38.30%), Postives = 52/94 (55.32%), Query Frame = 2


Query: 251 KDPFKGVDWKAVGGDMQKDPSSTNI-----IKKRRPTKIRQIPDYYFLPRRPLPYVMAFY 310
           KDP+KG +W     +  K P+++ +      +K+ P  +    + YFLPR+P P  +A+Y
Sbjct: 7   KDPWKGEEW-GTENEKTKKPTTSGVKTVTRARKQIPRGLEDKYEAYFLPRKPWPRALAYY 66

Query: 311 XXXXXXXXXXXMLVEMWINDKIKKDGGVIWEFDK 370
                      M++E WIN K+K+DGGVIWEFDK
Sbjct: 67  GSFILGGIGAGMVIEAWINKKVKEDGGVIWEFDK 99

Query: 371  430
           
Sbjct: 127  99

Query: 431  490
           
Sbjct: 187  99

Query: 491  518
           
Sbjct: 247  99

[Close]

BLAST of MU44962 vs. NCBI nr
Match: gi|659074925|ref|XP_008437869.1| (PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo])

HSP 1 Score: 193.0 bits (489), Expect = 5.6e-46
Identity = 92/103 (89.32%), Postives = 92/103 (89.32%), Query Frame = 2


Query: 209 MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 268
           MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR
Sbjct: 1   MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60

Query: 269 PLPYVMAFYXXXXXXXXXXXMLVEMWINDKIKKDGGVIWEFDK 328
           PLPYVMAFY           MLVEMWINDKIKKDGGVIWEFDK
Sbjct: 61  PLPYVMAFYGACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103

Query: 329  388
           
Sbjct: 121  103

Query: 389  448
           
Sbjct: 181  103

Query: 449  508
           
Sbjct: 241  103

Query: 509  518
           
Sbjct: 301  103

[Close]

BLAST of MU44962 vs. NCBI nr
Match: gi|449432034|ref|XP_004133805.1| (PREDICTED: uncharacterized protein LOC101207877 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 7.6e-43
Identity = 88/103 (85.44%), Postives = 89/103 (86.41%), Query Frame = 2


Query: 209 MGVEQNDPLKGVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 268
           MGVEQNDPLKGVEQKDP KGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR
Sbjct: 1   MGVEQNDPLKGVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRR 60

Query: 269 PLPYVMAFYXXXXXXXXXXXMLVEMWINDKIKKDGGVIWEFDK 328
            LP VMAFY           MLVE+WINDKIKKDGGVIWEFDK
Sbjct: 61  SLPSVMAFYGACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103

Query: 329  388
           
Sbjct: 121  103

Query: 389  448
           
Sbjct: 181  103

Query: 449  508
           
Sbjct: 241  103

Query: 509  518
           
Sbjct: 301  103

[Close]

BLAST of MU44962 vs. NCBI nr
Match: gi|224053703|ref|XP_002297937.1| (hypothetical protein POPTR_0001s11560g [Populus trichocarpa])

HSP 1 Score: 132.9 bits (333), Expect = 6.9e-28
Identity = 63/93 (67.74%), Postives = 72/93 (77.42%), Query Frame = 2


Query: 245 EQKDPFKGVDWKAVGGDMQKDPSSTN--IIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYX 304
           E KDPFKGVDWKA+GG++QKDPS+    IIKKR P KIRQIPDYYFLPR PLP V+AFY 
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSAGTKPIIKKRLPKKIRQIPDYYFLPRLPLPTVIAFYG 64

Query: 305 XXXXXXXXXXMLVEMWINDKIKKDGGVIWEFDK 364
                     ML+EMWIN K+K+DGG+IWEFDK
Sbjct: 65  ACIAGGVGAGMLLEMWINKKVKEDGGIIWEFDK 97

Query: 365  424
           
Sbjct: 125  97

Query: 425  484
           
Sbjct: 185  97

Query: 485  518
           
Sbjct: 245  97

[Close]

BLAST of MU44962 vs. NCBI nr
Match: gi|743842664|ref|XP_011026757.1| (PREDICTED: uncharacterized protein LOC105127238 [Populus euphratica])

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-27
Identity = 62/93 (66.67%), Postives = 71/93 (76.34%), Query Frame = 2


Query: 245 EQKDPFKGVDWKAVGGDMQKDPSSTN--IIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYX 304
           E KDPFKGVDWKA+GG++QKDPS+    IIKKR P KIRQIPDYYFLPR PLP  +AFY 
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSAVTKPIIKKRLPKKIRQIPDYYFLPRLPLPTAIAFYG 64

Query: 305 XXXXXXXXXXMLVEMWINDKIKKDGGVIWEFDK 364
                     ML+EMWIN K+K+DGG+IWEFDK
Sbjct: 65  ACIAGGVGAGMLLEMWINKKVKEDGGIIWEFDK 97

Query: 365  424
           
Sbjct: 125  97

Query: 425  484
           
Sbjct: 185  97

Query: 485  518
           
Sbjct: 245  97

[Close]

BLAST of MU44962 vs. NCBI nr
Match: gi|802694456|ref|XP_012083179.1| (PREDICTED: uncharacterized protein LOC105642827 [Jatropha curcas])

HSP 1 Score: 129.4 bits (324), Expect = 7.6e-27
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 2


Query: 245 EQKDPFKGVDWKAVGGDMQKDPSSTN--IIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYX 304
           E KDPFKGVDWKA+GG++QKDPS++   +IKKR P K+RQIPDYYFLPRR LP  +AFY 
Sbjct: 5   EPKDPFKGVDWKAIGGELQKDPSASAKPVIKKRLPKKVRQIPDYYFLPRRSLPSAIAFYG 64

Query: 305 XXXXXXXXXXMLVEMWINDKIKKDGGVIWEFDK 364
                     ML+E+WIN K+K+DGGVIWEFDK
Sbjct: 65  GCIAGGIGAGMLLEIWINKKVKEDGGVIWEFDK 97

Query: 365  424
           
Sbjct: 125  97

Query: 425  484
           
Sbjct: 185  97

Query: 485  518
           
Sbjct: 245  97

The following BLAST results are available for this feature:

BLAST of MU44962 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8I7_CUCSA	2.4e-43	85.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119440 PE=4 SV=1	[more]
B9GK55_POPTR	1.7e-28	67.74	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s11560g PE=4 SV=1	[more]
A0A067JX58_JATCU	1.8e-27	64.52	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14238 PE=4 SV=1	[more]
B9SBE8_RICCO	2.4e-27	64.52	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0716680 PE=4 SV=1	[more]
M5WRN2_PRUPE	7.0e-27	68.13	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015708mg PE=4 S...	[more]

BLAST of MU44962 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16950.1	4.6e-14	38.30	unknown protein	[more]

BLAST of MU44962 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074925\|ref\|XP_008437869.1\|	5.6e-46	89.32	PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo]	[more]
gi\|449432034\|ref\|XP_004133805.1\|	7.6e-43	85.44	PREDICTED: uncharacterized protein LOC101207877 [Cucumis sativus]	[more]
gi\|224053703\|ref\|XP_002297937.1\|	6.9e-28	67.74	hypothetical protein POPTR_0001s11560g [Populus trichocarpa]	[more]
gi\|743842664\|ref\|XP_011026757.1\|	1.2e-27	66.67	PREDICTED: uncharacterized protein LOC105127238 [Populus euphratica]	[more]
gi\|802694456\|ref\|XP_012083179.1\|	7.6e-27	64.52	PREDICTED: uncharacterized protein LOC105642827 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006010	MELO3C006010	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
15D26A06	15D26A06	EST
46D21E05	46D21E05	EST
AA5YA09FM1	AA5YA09FM1	EST
CI59H09	CI59H09	EST
HS38H03	HS38H03	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36797	FAMILY NOT NAMED	coord: 83..173 score: 2.4
None	No IPR available	PANTHER	PTHR36797:SF1	SUBFAMILY NOT NAMED	coord: 83..173 score: 2.4