Cla021845 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATACGCTTGCTGCAGTTTCCACAATGCAGAAATCAATCTCTGAGGGGTTAGACTACAGTGCTGGCCCTACCATTGTGAGTTCACTATAACTAAGAATTAATTGATTGATCTACTGAGAAGTTTTTTTTGGTTTTATTATTTACTTACAGAATCATATTGGAGTCATGATAATCTTTAGCTTTCATCTTCCCTTTTCCAAACTTTGTTGCAGTTTTGATGTCTATGTAGATCTTCTTACCTCTACTAGTAAGAGAGCATCCATTAAAATCGGTCCTCTAATTTGGTTAGATATCACTAGAGATTTTGTTATTGAACTTGACAAAAATGAAATAACATAAGAAAAGAAAAACAAAACTATAATAAGTTCCAACAACAATAGCTAGGAAATGTCTTTGCATGGCCATCGAGTTTAGTTATTCAACTAGTTCTTACTTGAGTAGATAAGATCTATCTATATGTTCTTTAGTTATTAAAGAGTTAACTAAAAAATTAAAAATTTAGTCCCTAGACTTAACAAAGTTTACTTACGTCTTTCCTGTCATTCCATGCATTCTCATACATTAACACGACATATGATTTTAACAAATATTGGTTGATTTAGTATGTCACATGGTCATTTATCTAACGGTATTAATGACAAAGCCTACATAGAATTACAAGCCTAATTTAAAGGATGTAATTAAGTTCAGAAACCAAATAGATGTTTGTATGGAAGCAGAATCCTTATTATATGTGGATGATATGGTTTTTACAGGAAGTGGCAAAGAAAGTGGGGGAAGCGATTGCAAAATCTTGTCTGGAGAAAGGGATAACAAAAGTTGCATTCGACCGTGGTGGATATCCATACCATGGTCGTGTAGAAGCGCTTGCTGATGCTGCTCGTGAACATGGTCTTCAATTCTGA ATGCATACGCTTGCTGCAGTTTCCACAATGCAGAAATCAATCTCTGAGGGGTTAGACTACAGTGCTGGCCCTACCATTGAAGTGGCAAAGAAAGTGGGGGAAGCGATTGCAAAATCTTGTCTGGAGAAAGGGATAACAAAAGTTGCATTCGACCGTGGTGGATATCCATACCATGGTCGTGTAGAAGCGCTTGCTGATGCTGCTCGTGAACATGGTCTTCAATTCTGA ATGCATACGCTTGCTGCAGTTTCCACAATGCAGAAATCAATCTCTGAGGGGTTAGACTACAGTGCTGGCCCTACCATTGAAGTGGCAAAGAAAGTGGGGGAAGCGATTGCAAAATCTTGTCTGGAGAAAGGGATAACAAAAGTTGCATTCGACCGTGGTGGATATCCATACCATGGTCGTGTAGAAGCGCTTGCTGATGCTGCTCGTGAACATGGTCTTCAATTCTGA MHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
BLAST of Cla021845 vs. Swiss-Prot
Match: RK18_ARATH (50S ribosomal protein L18, chloroplastic OS=Arabidopsis thaliana GN=RPL18 PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.9e-30 Identity = 64/75 (85.33%), Postives = 66/75 (88.00%), Query Frame = 1
BLAST of Cla021845 vs. Swiss-Prot
Match: RK18_ORYSJ (50S ribosomal protein L18, chloroplastic OS=Oryza sativa subsp. japonica GN=RPL18 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.4e-25 Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 1
BLAST of Cla021845 vs. Swiss-Prot
Match: RL18_CALS8 (50S ribosomal protein L18 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) GN=rplR PE=3 SV=2) HSP 1 Score: 85.1 bits (209), Expect = 3.5e-16 Identity = 43/74 (58.11%), Postives = 52/74 (70.27%), Query Frame = 1
BLAST of Cla021845 vs. Swiss-Prot
Match: RL18_SHELP (50S ribosomal protein L18 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=rplR PE=3 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 3.5e-16 Identity = 43/72 (59.72%), Postives = 52/72 (72.22%), Query Frame = 1
BLAST of Cla021845 vs. Swiss-Prot
Match: RL18_GEOSM (50S ribosomal protein L18 OS=Geobacter sp. (strain M21) GN=rplR PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 4.6e-16 Identity = 44/73 (60.27%), Postives = 51/73 (69.86%), Query Frame = 1
BLAST of Cla021845 vs. TrEMBL
Match: A0A0A0L9A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G171790 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 5.8e-34 Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 1
BLAST of Cla021845 vs. TrEMBL
Match: M5XM31_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012509mg PE=3 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 5.1e-30 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1
BLAST of Cla021845 vs. TrEMBL
Match: A0A058ZTZ3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_L01079 PE=3 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 6.7e-30 Identity = 67/75 (89.33%), Postives = 71/75 (94.67%), Query Frame = 1
BLAST of Cla021845 vs. TrEMBL
Match: A0A059D442_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02183 PE=3 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 6.7e-30 Identity = 67/75 (89.33%), Postives = 71/75 (94.67%), Query Frame = 1
BLAST of Cla021845 vs. TrEMBL
Match: M1A0E2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400004682 PE=3 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 8.7e-30 Identity = 66/75 (88.00%), Postives = 69/75 (92.00%), Query Frame = 1
BLAST of Cla021845 vs. NCBI nr
Match: gi|659077079|ref|XP_008439021.1| (PREDICTED: 50S ribosomal protein L18, chloroplastic [Cucumis melo]) HSP 1 Score: 151.4 bits (381), Expect = 6.4e-34 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1
BLAST of Cla021845 vs. NCBI nr
Match: gi|449459812|ref|XP_004147640.1| (PREDICTED: 50S ribosomal protein L18, chloroplastic [Cucumis sativus]) HSP 1 Score: 151.0 bits (380), Expect = 8.4e-34 Identity = 74/75 (98.67%), Postives = 75/75 (100.00%), Query Frame = 1
BLAST of Cla021845 vs. NCBI nr
Match: gi|645231256|ref|XP_008222310.1| (PREDICTED: 50S ribosomal protein L18, chloroplastic [Prunus mume]) HSP 1 Score: 139.0 bits (349), Expect = 3.3e-30 Identity = 67/75 (89.33%), Postives = 70/75 (93.33%), Query Frame = 1
BLAST of Cla021845 vs. NCBI nr
Match: gi|568849589|ref|XP_006478532.1| (PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Citrus sinensis]) HSP 1 Score: 139.0 bits (349), Expect = 3.3e-30 Identity = 67/75 (89.33%), Postives = 71/75 (94.67%), Query Frame = 1
BLAST of Cla021845 vs. NCBI nr
Match: gi|596288596|ref|XP_007225963.1| (hypothetical protein PRUPE_ppa012509mg [Prunus persica]) HSP 1 Score: 137.9 bits (346), Expect = 7.3e-30 Identity = 66/75 (88.00%), Postives = 70/75 (93.33%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |