Cla021738 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla021738
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Rapid alkalinization factor (AHRD V1 **-- A7LIT1_LITCN); contains Interpro domain(s) IPR008801 Rapid ALkalinization Factor
Location	Chr5 : 5793597 .. 5793962 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGCTCAAACATCCATGGCTTCCTCATTATCTGCGCAATCTCCGCCTCCTATCTGGCCCTCTCTTCATCCACCGCCGTCGATTTCACCGGAGACCGCCAGTTCCTCCACCTTCCGCCGGAATCTGTTTGTTGTTCAGGATCGGGATCGATCGCCGAGTGCCAGTTGGCGGCGGAGTTCGAGATACCGTCGGAGATCAGCCGCCGGATTCTGGCGACTACGAGGCGTTATATTAGCTACAGTGCGATGCGGAGGAACTCGGTGCCGTGCTCCCGACGCGGCGCGTCCTATTACAATTGCCAGGCTGGAGCTCCGGCGAATCCTTACTCTCGTGGGTGCAGCGCCATTACTCGATGTAGGTGA

mRNA sequence

ATGCAAAGCTCAAACATCCATGGCTTCCTCATTATCTGCGCAATCTCCGCCTCCTATCTGGCCCTCTCTTCATCCACCGCCGTCGATTTCACCGGAGACCGCCAGTTCCTCCACCTTCCGCCGGAATCTGTTTGTTGTTCAGGATCGGGATCGATCGCCGAGTGCCAGTTGGCGGCGGAGTTCGAGATACCGTCGGAGATCAGCCGCCGGATTCTGGCGACTACGAGGCGTTATATTAGCTACAGTGCGATGCGGAGGAACTCGGTGCCGTGCTCCCGACGCGGCGCGTCCTATTACAATTGCCAGGCTGGAGCTCCGGCGAATCCTTACTCTCGTGGGTGCAGCGCCATTACTCGATGTAGGTGA

Coding sequence (CDS)

ATGCAAAGCTCAAACATCCATGGCTTCCTCATTATCTGCGCAATCTCCGCCTCCTATCTGGCCCTCTCTTCATCCACCGCCGTCGATTTCACCGGAGACCGCCAGTTCCTCCACCTTCCGCCGGAATCTGTTTGTTGTTCAGGATCGGGATCGATCGCCGAGTGCCAGTTGGCGGCGGAGTTCGAGATACCGTCGGAGATCAGCCGCCGGATTCTGGCGACTACGAGGCGTTATATTAGCTACAGTGCGATGCGGAGGAACTCGGTGCCGTGCTCCCGACGCGGCGCGTCCTATTACAATTGCCAGGCTGGAGCTCCGGCGAATCCTTACTCTCGTGGGTGCAGCGCCATTACTCGATGTAGGTGA

Protein sequence

MQSSNIHGFLIICAISASYLALSSSTAVDFTGDRQFLHLPPESVCCSGSGSIAECQLAAEFEIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCR

Homology

[Close]

BLAST of Cla021738 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.4e-27
Identity = 68/117 (58.12%), Postives = 84/117 (71.79%), Query Frame = 1


Query: 10  LIICAISASYL--ALSSSTAVDFTGDRQFLHLPPESVCCSGSGSIAECQLAA---EFEIP 69
           +II  ++  +L  A++S ++ DF        +P ES C   +G+IAEC L+    EFE+ 
Sbjct: 11  IIIAILTVHFLFAAVTSQSSGDF--------VPIESKC---NGTIAECSLSTAEEEFEMD 70

Query: 70  SEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCR 122
           SEI+RRILATT+ YISY A+RRN+VPCSRRGASYYNC+ GA ANPYSRGCSAITRCR
Sbjct: 71  SEINRRILATTK-YISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Cla021738 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-25
Identity = 66/119 (55.46%), Postives = 74/119 (62.18%), Query Frame = 1


Query: 4   SNIHGFLIICAISASYLALSSSTAVDFTGDRQFLHLPPESVCCSGSGSIAECQLAAE-FE 63
           +N      + AI A  ++   ST  DF     F+     S+    +GSIAEC    E  E
Sbjct: 2   TNTRAIYAVIAILAIVISAVESTG-DFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEME 61

Query: 64  IPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCR 122
             S+ISRRILA  ++YISY AMRRNSVPCSRRGASYYNCQ GA ANPYSRGCS ITRCR
Sbjct: 62  FDSDISRRILAQ-KKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of Cla021738 vs. Swiss-Prot
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.7e-24
Identity = 55/72 (76.39%), Postives = 59/72 (81.94%), Query Frame = 1


Query: 50  GSIAECQLAAEFEIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANP 109
           GSIAEC  A E E+ SEI+RRILATT+ YISY +++RNSVPCSRRGASYYNCQ GA ANP
Sbjct: 49  GSIAECIGAEEEEMDSEINRRILATTK-YISYQSLKRNSVPCSRRGASYYNCQNGAQANP 108

Query: 110 YSRGCSAITRCR 122
           YSRGCS I RCR
Sbjct: 109 YSRGCSKIARCR 119

[Close]

BLAST of Cla021738 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.8e-23
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 56  QLAAEFEIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCS 115
           ++  EFE+ SEI+RRILAT RRYISY A+RRN++PCSRRGASYYNC+ GA ANPYSRGCS
Sbjct: 72  EMGEEFEMDSEINRRILAT-RRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCS 131

Query: 116 AITRCR 122
           AITRCR
Sbjct: 132 AITRCR 136

[Close]

BLAST of Cla021738 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-22
Identity = 53/73 (72.60%), Postives = 59/73 (80.82%), Query Frame = 1


Query: 50  GSIAECQLAAE-FEIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPAN 109
           GSI EC    E FE+ SE +RRILAT ++YISY A+++NSVPCSRRGASYYNC+ GA AN
Sbjct: 43  GSIGECIAEEEEFELDSESNRRILAT-KKYISYGALQKNSVPCSRRGASYYNCKPGAQAN 102

Query: 110 PYSRGCSAITRCR 122
           PYSRGCSAITRCR
Sbjct: 103 PYSRGCSAITRCR 114

[Close]

BLAST of Cla021738 vs. TrEMBL
Match: A5BUA5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037723 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.7e-30
Identity = 75/120 (62.50%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 5   NIHGFLIICAISASYLALSSSTAVDFTGDR---QFLHLPPESVCCSGSGSIAECQLAAEF 64
           N   F++ICAI A ++ L+SS AVDF+GD    Q   +P  S C    GSIAEC    EF
Sbjct: 3   NSSAFVLICAIMAVHMVLTSS-AVDFSGDHLQFQLGWIPARSAC---QGSIAECLAGEEF 62

Query: 65  EIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCR 122
           E+ SEI+RRILA+ +RYISY A+ RNSVPCSRRGASYYNC+ GA ANPY+RGCSAITRCR
Sbjct: 63  EMDSEINRRILAS-KRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 117

[Close]

BLAST of Cla021738 vs. TrEMBL
Match: F6HDF3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01490 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.7e-30
Identity = 75/120 (62.50%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 5   NIHGFLIICAISASYLALSSSTAVDFTGDR---QFLHLPPESVCCSGSGSIAECQLAAEF 64
           N   F++ICAI A ++ L+SS AVDF+GD    Q   +P  S C    GSIAEC    EF
Sbjct: 3   NSSAFVLICAIMAVHMVLTSS-AVDFSGDHLQFQLGWIPARSAC---QGSIAECLAGEEF 62

Query: 65  EIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCR 122
           E+ SEI+RRILA+ +RYISY A+ RNSVPCSRRGASYYNC+ GA ANPY+RGCSAITRCR
Sbjct: 63  EMDSEINRRILAS-KRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 117

[Close]

BLAST of Cla021738 vs. TrEMBL
Match: A7LIT1_LITCN (Rapid alkalinization factor OS=Litchi chinensis PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.4e-29
Identity = 75/129 (58.14%), Postives = 94/129 (72.87%), Query Frame = 1


Query: 1   MQSSNIHGFLIICA--ISASYLALSSSTAVDFTGDRQFLHLPPESVCCSGSGSIAEC--- 60
           M++SN+ G +++ +  I A ++A+S+S+AVDF    QF   P +  C   SGSI EC   
Sbjct: 1   MRTSNLSGLVLVISAVILAVHVAVSASSAVDFNAGHQFGFFPMKPEC---SGSIGECATV 60

Query: 61  ---QLAAEFEIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSR 120
              +L  EFE+ SE +RRILAT++ YISY A+RRNSVPCSRRGASYYNCQ GA ANPYSR
Sbjct: 61  GDEELDLEFEMDSESNRRILATSQ-YISYGALRRNSVPCSRRGASYYNCQTGAQANPYSR 120

Query: 121 GCSAITRCR 122
           GCSAITRCR
Sbjct: 121 GCSAITRCR 125

[Close]

BLAST of Cla021738 vs. TrEMBL
Match: A0A067JV88_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18872 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.9e-28
Identity = 75/127 (59.06%), Postives = 87/127 (68.50%), Query Frame = 1


Query: 1   MQSSNIHGFLIICAISASYLALSSSTAVDFTGDRQFLHLPPESVCCSGSGSIAECQL--- 60
           M SS  +G L+ICAI A + A+SSS+   F        +P ES C    GSIAEC +   
Sbjct: 1   MGSSKCYGLLLICAILAVHAAISSSSTAGFD------FIPMESGC---RGSIAECLINGD 60

Query: 61  ---AAEFEIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGC 120
                EF + SEI+RRILAT R YISY A+RRNSVPCSRRGASYYNC+AGA ANPYSRGC
Sbjct: 61  EDFETEFAMDSEINRRILAT-RTYISYGALRRNSVPCSRRGASYYNCRAGAQANPYSRGC 117

Query: 121 SAITRCR 122
           + ITRCR
Sbjct: 121 NRITRCR 117

[Close]

BLAST of Cla021738 vs. TrEMBL
Match: A0A0D2Q718_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G028300 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.9e-28
Identity = 78/131 (59.54%), Postives = 89/131 (67.94%), Query Frame = 1


Query: 1   MQSSNIHGFLIICAISASYLALS-SSTAVDFTGDRQFLHLPPESVCCSGSGSIAECQLA- 60
           M+SS    FL ICAI A ++A++ SS   DF GD  FL +  E      SGSIAEC +  
Sbjct: 1   MRSSRFSMFLAICAILAVHVAVTTSSPTFDFAGDH-FLQIKSEC-----SGSIAECLMQG 60

Query: 61  --------AEFEIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPY 120
                   AEF + SEISRRILA  RRYISY A+RRN+VPCSRRGASYYNC+ GA ANPY
Sbjct: 61  GEDSSDFDAEFAVGSEISRRILAA-RRYISYGALRRNTVPCSRRGASYYNCRPGAQANPY 120

Query: 121 SRGCSAITRCR 122
           SRGCS ITRCR
Sbjct: 121 SRGCSRITRCR 124

[Close]

BLAST of Cla021738 vs. NCBI nr
Match: gi|147862659|emb|CAN83593.1| (hypothetical protein VITISV_037723 [Vitis vinifera])

HSP 1 Score: 139.0 bits (349), Expect = 5.3e-30
Identity = 75/120 (62.50%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 5   NIHGFLIICAISASYLALSSSTAVDFTGDR---QFLHLPPESVCCSGSGSIAECQLAAEF 64
           N   F++ICAI A ++ L+SS AVDF+GD    Q   +P  S C    GSIAEC    EF
Sbjct: 3   NSSAFVLICAIMAVHMVLTSS-AVDFSGDHLQFQLGWIPARSAC---QGSIAECLAGEEF 62

Query: 65  EIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCR 122
           E+ SEI+RRILA+ +RYISY A+ RNSVPCSRRGASYYNC+ GA ANPY+RGCSAITRCR
Sbjct: 63  EMDSEINRRILAS-KRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 117

[Close]

BLAST of Cla021738 vs. NCBI nr
Match: gi|297736875|emb|CBI26076.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 139.0 bits (349), Expect = 5.3e-30
Identity = 75/120 (62.50%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 5   NIHGFLIICAISASYLALSSSTAVDFTGDR---QFLHLPPESVCCSGSGSIAECQLAAEF 64
           N   F++ICAI A ++ L+SS AVDF+GD    Q   +P  S C    GSIAEC    EF
Sbjct: 37  NSSAFVLICAIMAVHMVLTSS-AVDFSGDHLQFQLGWIPARSAC---QGSIAECLAGEEF 96

Query: 65  EIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCR 122
           E+ SEI+RRILA+ +RYISY A+ RNSVPCSRRGASYYNC+ GA ANPY+RGCSAITRCR
Sbjct: 97  EMDSEINRRILAS-KRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 151

[Close]

BLAST of Cla021738 vs. NCBI nr
Match: gi|225432308|ref|XP_002273386.1| (PREDICTED: protein RALF-like 33 [Vitis vinifera])

HSP 1 Score: 139.0 bits (349), Expect = 5.3e-30
Identity = 75/120 (62.50%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 5   NIHGFLIICAISASYLALSSSTAVDFTGDR---QFLHLPPESVCCSGSGSIAECQLAAEF 64
           N   F++ICAI A ++ L+SS AVDF+GD    Q   +P  S C    GSIAEC    EF
Sbjct: 3   NSSAFVLICAIMAVHMVLTSS-AVDFSGDHLQFQLGWIPARSAC---QGSIAECLAGEEF 62

Query: 65  EIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGCSAITRCR 122
           E+ SEI+RRILA+ +RYISY A+ RNSVPCSRRGASYYNC+ GA ANPY+RGCSAITRCR
Sbjct: 63  EMDSEINRRILAS-KRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 117

[Close]

BLAST of Cla021738 vs. NCBI nr
Match: gi|154269428|gb|ABS72341.1| (rapid alkalinization factor precursor [Litchi chinensis])

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-29
Identity = 75/129 (58.14%), Postives = 94/129 (72.87%), Query Frame = 1


Query: 1   MQSSNIHGFLIICA--ISASYLALSSSTAVDFTGDRQFLHLPPESVCCSGSGSIAEC--- 60
           M++SN+ G +++ +  I A ++A+S+S+AVDF    QF   P +  C   SGSI EC   
Sbjct: 1   MRTSNLSGLVLVISAVILAVHVAVSASSAVDFNAGHQFGFFPMKPEC---SGSIGECATV 60

Query: 61  ---QLAAEFEIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSR 120
              +L  EFE+ SE +RRILAT++ YISY A+RRNSVPCSRRGASYYNCQ GA ANPYSR
Sbjct: 61  GDEELDLEFEMDSESNRRILATSQ-YISYGALRRNSVPCSRRGASYYNCQTGAQANPYSR 120

Query: 121 GCSAITRCR 122
           GCSAITRCR
Sbjct: 121 GCSAITRCR 125

[Close]

BLAST of Cla021738 vs. NCBI nr
Match: gi|802701358|ref|XP_012083935.1| (PREDICTED: protein RALF-like 33 [Jatropha curcas])

HSP 1 Score: 131.7 bits (330), Expect = 8.5e-28
Identity = 75/127 (59.06%), Postives = 87/127 (68.50%), Query Frame = 1


Query: 1   MQSSNIHGFLIICAISASYLALSSSTAVDFTGDRQFLHLPPESVCCSGSGSIAECQL--- 60
           M SS  +G L+ICAI A + A+SSS+   F        +P ES C    GSIAEC +   
Sbjct: 1   MGSSKCYGLLLICAILAVHAAISSSSTAGFD------FIPMESGC---RGSIAECLINGD 60

Query: 61  ---AAEFEIPSEISRRILATTRRYISYSAMRRNSVPCSRRGASYYNCQAGAPANPYSRGC 120
                EF + SEI+RRILAT R YISY A+RRNSVPCSRRGASYYNC+AGA ANPYSRGC
Sbjct: 61  EDFETEFAMDSEINRRILAT-RTYISYGALRRNSVPCSRRGASYYNCRAGAQANPYSRGC 117

Query: 121 SAITRCR 122
           + ITRCR
Sbjct: 121 NRITRCR 117

The following BLAST results are available for this feature:

BLAST of Cla021738 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLF33_ARATH	9.4e-27	58.12	Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1	[more]
RLF22_ARATH	1.8e-25	55.46	Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1	[more]
RLF1_ARATH	9.7e-24	76.39	Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1	[more]
RLF23_ARATH	2.8e-23	77.27	Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1	[more]
RALF_TOBAC	1.8e-22	72.60	Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1	[more]

BLAST of Cla021738 vs. TrEMBL


Match Name	E-value	Identity	Description
A5BUA5_VITVI	3.7e-30	62.50	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037723 PE=4 SV=1	[more]
F6HDF3_VITVI	3.7e-30	62.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01490 PE=4 SV=...	[more]
A7LIT1_LITCN	1.4e-29	58.14	Rapid alkalinization factor OS=Litchi chinensis PE=2 SV=1	[more]
A0A067JV88_JATCU	5.9e-28	59.06	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18872 PE=4 SV=1	[more]
A0A0D2Q718_GOSRA	5.9e-28	59.54	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G028300 PE=4 SV=1	[more]

BLAST of Cla021738 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147862659\|emb\|CAN83593.1\|	5.3e-30	62.50	hypothetical protein VITISV_037723 [Vitis vinifera]	[more]
gi\|297736875\|emb\|CBI26076.3\|	5.3e-30	62.50	unnamed protein product [Vitis vinifera]	[more]
gi\|225432308\|ref\|XP_002273386.1\|	5.3e-30	62.50	PREDICTED: protein RALF-like 33 [Vitis vinifera]	[more]
gi\|154269428\|gb\|ABS72341.1\|	2.0e-29	58.14	rapid alkalinization factor precursor [Litchi chinensis]	[more]
gi\|802701358\|ref\|XP_012083935.1\|	8.5e-28	59.06	PREDICTED: protein RALF-like 33 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0007267	cell-cell signaling
biological_process	GO:0007154	cell communication
biological_process	GO:0044700	single organism signaling
biological_process	GO:0008150	biological_process
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009505	plant-type cell wall
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0005179	hormone activity
molecular_function	GO:0004871	signal transducer activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU43923	watermelon EST collection version 2.0	transcribed_cluster
WMU48151	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla021738	Cla021738.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU48151	WMU48151	transcribed_cluster
WMU43923	WMU43923	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 60..121 score: 1.9
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 10..121 score: 1.1
None	No IPR available	PANTHER	PTHR33136:SF5	PROTEIN RALF-LIKE 1-RELATED	coord: 10..121 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla021738	Cla97C05G087570	Watermelon (97103) v2	wmwmbB206
Cla021738	Cla97C06G114640	Watermelon (97103) v2	wmwmbB217
Cla021738	Csa7G396340	Cucumber (Chinese Long) v2	cuwmB588
Cla021738	Csa6G194150	Cucumber (Chinese Long) v2	cuwmB499
Cla021738	MELO3C021331	Melon (DHL92) v3.5.1	mewmB096
Cla021738	ClCG06G005140	Watermelon (Charleston Gray)	wcgwmB332
Cla021738	CSPI06G14730	Wild cucumber (PI 183967)	cpiwmB515
Cla021738	Cucsa.205730	Cucumber (Gy14) v1	cgywmB405
Cla021738	Cucsa.172250	Cucumber (Gy14) v1	cgywmB327
Cla021738	CmaCh08G012260	Cucurbita maxima (Rimu)	cmawmB869
Cla021738	CmaCh17G011040	Cucurbita maxima (Rimu)	cmawmB345
Cla021738	CmaCh17G003240	Cucurbita maxima (Rimu)	cmawmB344
Cla021738	CmoCh08G012000	Cucurbita moschata (Rifu)	cmowmB856
Cla021738	CmoCh17G003110	Cucurbita moschata (Rifu)	cmowmB341
Cla021738	Lsi09G014280	Bottle gourd (USVL1VR-Ls)	lsiwmB017
Cla021738	Cp4.1LG12g02690	Cucurbita pepo (Zucchini)	cpewmB152
Cla021738	Cp4.1LG12g05450	Cucurbita pepo (Zucchini)	cpewmB153
Cla021738	Cp4.1LG17g00620	Cucurbita pepo (Zucchini)	cpewmB329
Cla021738	CsGy7G015720	Cucumber (Gy14) v2	cgybwmB552
Cla021738	CsGy6G014610	Cucumber (Gy14) v2	cgybwmB466
Cla021738	MELO3C021331.2	Melon (DHL92) v3.6.1	medwmB094
Cla021738	Carg18842	Silver-seed gourd	carwmB0700
Cla021738	Carg05502	Silver-seed gourd	carwmB0070
Cla021738	CsaV3_6G017190	Cucumber (Chinese Long) v3	cucwmB523
Cla021738	Bhi12G001826	Wax gourd	wgowmB069
Cla021738	Bhi01G000714	Wax gourd	wgowmB201

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla021738	Cla015049	Watermelon (97103) v1	wmwmB022
Cla021738	Cla009305	Watermelon (97103) v1	wmwmB138

The following block(s) are covering this gene:


Gene	Organism	Block
Cla021738	Cucumber (Gy14) v1	cgywmB479
Cla021738	Cucurbita maxima (Rimu)	cmawmB005
Cla021738	Cucurbita maxima (Rimu)	cmawmB242
Cla021738	Cucurbita maxima (Rimu)	cmawmB798
Cla021738	Cucurbita moschata (Rifu)	cmowmB231
Cla021738	Cucurbita moschata (Rifu)	cmowmB793
Cla021738	Melon (DHL92) v3.5.1	mewmB461
Cla021738	Watermelon (Charleston Gray)	wcgwmB286
Cla021738	Cucumber (Chinese Long) v2	cuwmB233
Cla021738	Cucurbita pepo (Zucchini)	cpewmB613
Cla021738	Cucurbita pepo (Zucchini)	cpewmB845
Cla021738	Bottle gourd (USVL1VR-Ls)	lsiwmB362
Cla021738	Cucumber (Gy14) v2	cgybwmB041
Cla021738	Cucumber (Gy14) v2	cgybwmB217
Cla021738	Melon (DHL92) v3.6.1	medwmB271
Cla021738	Melon (DHL92) v3.6.1	medwmB447
Cla021738	Silver-seed gourd	carwmB0603
Cla021738	Silver-seed gourd	carwmB0834
Cla021738	Cucumber (Chinese Long) v3	cucwmB046
Cla021738	Cucumber (Chinese Long) v3	cucwmB239