Cucsa.205730 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.205730
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRapid alkalinization factor
Locationscaffold01416 : 740200 .. 740561 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAGCAAGAGAGAAAGTAACAATGGCCACCACGGTTTCTTTTCTTCTTCCAATTTTCTTACTAGTTGCTATCCTGACGGTCTCCTCCACCGCCAAGACACCAAGCTGGGTCCTAGATGGAGCTCATGCTCGTTGTCACGGATCCATGGCAGAGTGCATGATGGAAGATATCGAGTTTCAGATGGACTCTGAGATCAACAGACGCATATTGGCAGATTTAAACTACATAAGCTATGACGCACTCAAGGCCAACTCAGTGCCATGCTCACGCAAAGGAGCATCTTACTACAACTGTCAGCCAGGTGCCGAGGCAAACCCCTATGACCGTGGCTGTAATGCTATTTCTCGTTGTCGAAGCTAA

mRNA sequence

GAAGAGCAAGAGAGAAAGTAACAATGGCCACCACGGTTTCTTTTCTTCTTCCAATTTTCTTACTAGTTGCTATCCTGACGGTCTCCTCCACCGCCAAGACACCAAGCTGGGTCCTAGATGGAGCTCATGCTCGTTGTCACGGATCCATGGCAGAGTGCATGATGGAAGATATCGAGTTTCAGATGGACTCTGAGATCAACAGACGCATATTGGCAGATTTAAACTACATAAGCTATGACGCACTCAAGGCCAACTCAGTGCCATGCTCACGCAAAGGAGCATCTTACTACAACTGTCAGCCAGGTGCCGAGGCAAACCCCTATGACCGTGGCTGTAATGCTATTTCTCGTTGTCGAAGCTAA

Coding sequence (CDS)

GAAGAGCAAGAGAGAAAGTAACAATGGCCACCACGGTTTCTTTTCTTCTTCCAATTTTCTTACTAGTTGCTATCCTGACGGTCTCCTCCACCGCCAAGACACCAAGCTGGGTCCTAGATGGAGCTCATGCTCGTTGTCACGGATCCATGGCAGAGTGCATGATGGAAGATATCGAGTTTCAGATGGACTCTGAGATCAACAGACGCATATTGGCAGATTTAAACTACATAAGCTATGACGCACTCAAGGCCAACTCAGTGCCATGCTCACGCAAAGGAGCATCTTACTACAACTGTCAGCCAGGTGCCGAGGCAAACCCCTATGACCGTGGCTGTAATGCTATTTCTCGTTGTCGAAGCTAA

Protein sequence

RAREKVTMATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS*
Homology
[Close]
BLAST of Cucsa.205730 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.3e-27
Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = 1 

Query: 16  LPIFLLVAILTVSSTAKTPS----WVLDG-AHARCHGSMAECMMEDIEFQMDSEINRRIL 75
           L + +L+    +S  A   S    WV+   +   C GS+ EC+ E+ EF++DSE NRRIL
Sbjct: 7   LILCVLIGAFFISMAAAGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSESNRRIL 66

Query: 76  ADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           A   YISY AL+ NSVPCSR+GASYYNC+PGA+ANPY RGC+AI+RCRS
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]
BLAST of Cucsa.205730 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-26
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 1 

Query: 17  PIFLLVAILTV----SSTAKTPSWVLDGAHARCHGSMAECMME--DIEFQMDSEINRRIL 76
           P+ +++AILTV    ++     S       ++C+G++AEC +   + EF+MDSEINRRIL
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRIL 67

Query: 77  ADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCR 119
           A   YISY AL+ N+VPCSR+GASYYNC+ GA+ANPY RGC+AI+RCR
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]
BLAST of Cucsa.205730 vs. Swiss-Prot
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.9e-26
Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 1 

Query: 18  IFLLVAILTVSSTAKTP------------SWVLDGAHAR-CHGSMAECMMEDIEFQMDSE 77
           +FL + IL V   +  P            +W   G +   CHGS+AEC+  + E +MDSE
Sbjct: 7   LFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEE-EMDSE 66

Query: 78  INRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           INRRILA   YISY +LK NSVPCSR+GASYYNCQ GA+ANPY RGC+ I+RCRS
Sbjct: 67  INRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]
BLAST of Cucsa.205730 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.3e-24
Identity = 49/74 (66.22%), Postives = 61/74 (82.43%), Query Frame = 1 

Query: 45  CHGSMAECMMEDIEFQMDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEA 104
           C GS+AEC+ E+ E + DS+I+RRILA   YISY A++ NSVPCSR+GASYYNCQ GA+A
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQA 104

Query: 105 NPYDRGCNAISRCR 119
           NPY RGC+ I+RCR
Sbjct: 105 NPYSRGCSTITRCR 118

[Close]
BLAST of Cucsa.205730 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.1e-22
Identity = 56/124 (45.16%), Postives = 73/124 (58.87%), Query Frame = 1 

Query: 15  LLPIFLLVAILTVSSTAKTPSWVLDGA----HARCHGSMAECMMEDI------------- 74
           +  I L++A+   S    + S    G        C G++AEC +                
Sbjct: 13  IFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGE 72

Query: 75  ---EFQMDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAI 119
              EF+MDSEINRRILA   YISY AL+ N++PCSR+GASYYNC+ GA+ANPY RGC+AI
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

[Close]
BLAST of Cucsa.205730 vs. TrEMBL
Match: A0A0A0K607_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396340 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 4.2e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 8   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 67
           MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 60

Query: 68  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS
Sbjct: 61  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]
BLAST of Cucsa.205730 vs. TrEMBL
Match: V4U5R6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023750mg PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.6e-28
Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1 

Query: 8   MATTVSFLLPIFLLVAILTVSSTAKTP-------SWVLDGAHARCHGSMAECMMEDIEFQ 67
           MA T++FLL ++L +A L + S+           SWV   A ARC GSMAECM ++ EF 
Sbjct: 1   MAKTLAFLLCVYLFLAALMMDSSTVVDAGVDQRLSWV--PAKARCQGSMAECMADE-EFG 60

Query: 68  MDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           MDSEINRRILA   YISY AL+ +SVPCS++GASYYNC  GA+ANPY RGC+AI+RCRS
Sbjct: 61  MDSEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCRS 116

[Close]
BLAST of Cucsa.205730 vs. TrEMBL
Match: A0A067H8J5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033577mg PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.6e-28
Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1 

Query: 8   MATTVSFLLPIFLLVAILTVSSTAKTP-------SWVLDGAHARCHGSMAECMMEDIEFQ 67
           MA T++FLL ++L +A L + S+           SWV   A ARC GSMAECM ++ EF 
Sbjct: 1   MAKTLAFLLCVYLFLAALMMDSSTVVDAGVDQRLSWV--PAKARCQGSMAECMADE-EFG 60

Query: 68  MDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           MDSEINRRILA   YISY AL+ +SVPCS++GASYYNC  GA+ANPY RGC+AI+RCRS
Sbjct: 61  MDSEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCRS 116

[Close]
BLAST of Cucsa.205730 vs. TrEMBL
Match: A0A0A0KWI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001640 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.4e-28
Identity = 64/110 (58.18%), Postives = 85/110 (77.27%), Query Frame = 1 

Query: 11  TVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHG-SMAECMMEDIEFQMDSEINRRI 70
           T++F +       ++T  S+ ++ +W+     ARCHG S++ECMM  IEF+MDSEINRRI
Sbjct: 16  TIAFFVSSSSSSLVVTTMSSDRSLNWL--STEARCHGRSISECMMH-IEFEMDSEINRRI 75

Query: 71  LADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           LA  +YISY +L+AN++PCSR+G+SYYNCQPGAEANPY RGC AI+RCRS
Sbjct: 76  LATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 122

[Close]
BLAST of Cucsa.205730 vs. TrEMBL
Match: A0A0D2TE37_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G129000 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.5e-28
Identity = 71/118 (60.17%), Postives = 85/118 (72.03%), Query Frame = 1 

Query: 8   MATTVSFLLPIFLL-VAILTVSSTAKTP-----SWVLDGAHARCHGSMAECMMEDIEFQM 67
           MA    FLLP+ L+ VA++   ST  T      SW  +   + C GSMAECM ED EF M
Sbjct: 1   MANPSCFLLPVSLIFVALIMALSTVDTSAEHHLSWSPN--KSGCQGSMAECMAED-EFDM 60

Query: 68  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           DSEINRRIL    YISY AL+ N+VPCS++GASYYNCQPGA+ANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILQTTQYISYGALQRNTVPCSQRGASYYNCQPGAQANPYNRGCSAITRCRS 115

[Close]
BLAST of Cucsa.205730 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-27
Identity = 58/108 (53.70%), Postives = 79/108 (73.15%), Query Frame = 1 

Query: 17  PIFLLVAILTV----SSTAKTPSWVLDGAHARCHGSMAECMME--DIEFQMDSEINRRIL 76
           P+ +++AILTV    ++     S       ++C+G++AEC +   + EF+MDSEINRRIL
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRIL 67

Query: 77  ADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCR 119
           A   YISY AL+ N+VPCSR+GASYYNC+ GA+ANPY RGC+AI+RCR
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]
BLAST of Cucsa.205730 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1)

HSP 1 Score: 117.9 bits (294), Expect = 4.4e-27
Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 1 

Query: 18  IFLLVAILTVSSTAKTP------------SWVLDGAHAR-CHGSMAECMMEDIEFQMDSE 77
           +FL + IL V   +  P            +W   G +   CHGS+AEC+  + E +MDSE
Sbjct: 7   LFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEE-EMDSE 66

Query: 78  INRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           INRRILA   YISY +LK NSVPCSR+GASYYNCQ GA+ANPY RGC+ I+RCRS
Sbjct: 67  INRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]
BLAST of Cucsa.205730 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 112.5 bits (280), Expect = 1.9e-25
Identity = 49/74 (66.22%), Postives = 61/74 (82.43%), Query Frame = 1 

Query: 45  CHGSMAECMMEDIEFQMDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEA 104
           C GS+AEC+ E+ E + DS+I+RRILA   YISY A++ NSVPCSR+GASYYNCQ GA+A
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQA 104

Query: 105 NPYDRGCNAISRCR 119
           NPY RGC+ I+RCR
Sbjct: 105 NPYSRGCSTITRCR 118

[Close]
BLAST of Cucsa.205730 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 105.9 bits (263), Expect = 1.7e-23
Identity = 56/124 (45.16%), Postives = 73/124 (58.87%), Query Frame = 1 

Query: 15  LLPIFLLVAILTVSSTAKTPSWVLDGA----HARCHGSMAECMMEDI------------- 74
           +  I L++A+   S    + S    G        C G++AEC +                
Sbjct: 13  IFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGE 72

Query: 75  ---EFQMDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAI 119
              EF+MDSEINRRILA   YISY AL+ N++PCSR+GASYYNC+ GA+ANPY RGC+AI
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

[Close]
BLAST of Cucsa.205730 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-16
Identity = 46/107 (42.99%), Postives = 68/107 (63.55%), Query Frame = 1 

Query: 16  LPIFLLVAILTVSSTAKTPS--WVLDGAHARCHGSMAECMMED--IEFQMDSEINRRILA 75
           + I L++ +LT++  A++ +  W L  +     G    C+ ED  +++ MDSE NRR LA
Sbjct: 3   IKILLILGLLTLAVVAESANATWTLTKSCVNGQG----CIGEDGELDYLMDSETNRRQLA 62

Query: 76  DL-NYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRC 118
              +YISY AL+ N+VPCSR+G SYY+C+    ANPY RGC+ I+ C
Sbjct: 63  ARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105

[Close]
BLAST of Cucsa.205730 vs. NCBI nr
Match: gi|778730402|ref|XP_011659776.1| (PREDICTED: rapid alkalinization factor [Cucumis sativus])

HSP 1 Score: 231.9 bits (590), Expect = 6.0e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 8   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 67
           MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 60

Query: 68  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS
Sbjct: 61  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]
BLAST of Cucsa.205730 vs. NCBI nr
Match: gi|659101540|ref|XP_008451660.1| (PREDICTED: rapid alkalinization factor-like [Cucumis melo])

HSP 1 Score: 218.0 bits (554), Expect = 8.9e-54
Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 1 

Query: 8   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 67
           MA  VSFLLPIFLLVAILTVSSTA TPSWVL GAHARCHGSMAECM EDIEF+MDSEINR
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTATTPSWVLGGAHARCHGSMAECMKEDIEFEMDSEINR 60

Query: 68  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           RILADLNYISYDAL+ANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS
Sbjct: 61  RILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]
BLAST of Cucsa.205730 vs. NCBI nr
Match: gi|567903596|ref|XP_006444286.1| (hypothetical protein CICLE_v10023750mg [Citrus clementina])

HSP 1 Score: 132.9 bits (333), Expect = 3.8e-28
Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1 

Query: 8   MATTVSFLLPIFLLVAILTVSSTAKTP-------SWVLDGAHARCHGSMAECMMEDIEFQ 67
           MA T++FLL ++L +A L + S+           SWV   A ARC GSMAECM ++ EF 
Sbjct: 1   MAKTLAFLLCVYLFLAALMMDSSTVVDAGVDQRLSWV--PAKARCQGSMAECMADE-EFG 60

Query: 68  MDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           MDSEINRRILA   YISY AL+ +SVPCS++GASYYNC  GA+ANPY RGC+AI+RCRS
Sbjct: 61  MDSEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCRS 116

[Close]
BLAST of Cucsa.205730 vs. NCBI nr
Match: gi|700197639|gb|KGN52797.1| (hypothetical protein Csa_4G001640 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 4.9e-28
Identity = 64/110 (58.18%), Postives = 85/110 (77.27%), Query Frame = 1 

Query: 11  TVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHG-SMAECMMEDIEFQMDSEINRRI 70
           T++F +       ++T  S+ ++ +W+     ARCHG S++ECMM  IEF+MDSEINRRI
Sbjct: 16  TIAFFVSSSSSSLVVTTMSSDRSLNWL--STEARCHGRSISECMMH-IEFEMDSEINRRI 75

Query: 71  LADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           LA  +YISY +L+AN++PCSR+G+SYYNCQPGAEANPY RGC AI+RCRS
Sbjct: 76  LATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 122

[Close]
BLAST of Cucsa.205730 vs. NCBI nr
Match: gi|823188148|ref|XP_012490418.1| (PREDICTED: protein RALF-like 33 [Gossypium raimondii])

HSP 1 Score: 132.1 bits (331), Expect = 6.4e-28
Identity = 71/118 (60.17%), Postives = 85/118 (72.03%), Query Frame = 1 

Query: 8   MATTVSFLLPIFLL-VAILTVSSTAKTP-----SWVLDGAHARCHGSMAECMMEDIEFQM 67
           MA    FLLP+ L+ VA++   ST  T      SW  +   + C GSMAECM ED EF M
Sbjct: 1   MANPSCFLLPVSLIFVALIMALSTVDTSAEHHLSWSPN--KSGCQGSMAECMAED-EFDM 60

Query: 68  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 120
           DSEINRRIL    YISY AL+ N+VPCS++GASYYNCQPGA+ANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILQTTQYISYGALQRNTVPCSQRGASYYNCQPGAQANPYNRGCSAITRCRS 115

The following BLAST results are available for this feature:
BLAST of Cucsa.205730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RALF_TOBAC9.3e-2755.05Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1[more]
RLF33_ARATH2.7e-2653.70Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1[more]
RLF1_ARATH7.9e-2653.91Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1[more]
RLF22_ARATH3.3e-2466.22Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1[more]
RLF23_ARATH3.1e-2245.16Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1[more]
BLAST of Cucsa.205730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K607_CUCSA4.2e-58100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396340 PE=4 SV=1[more]
V4U5R6_9ROSI2.6e-2858.82Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023750mg PE=4 SV=1[more]
A0A067H8J5_CITSI2.6e-2858.82Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033577mg PE=4 SV=1[more]
A0A0A0KWI2_CUCSA3.4e-2858.18Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001640 PE=4 SV=1[more]
A0A0D2TE37_GOSRA4.5e-2860.17Uncharacterized protein OS=Gossypium raimondii GN=B456_007G129000 PE=4 SV=1[more]
BLAST of Cucsa.205730 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15800.11.5e-2753.70 ralf-like 33[more]
AT1G02900.14.4e-2753.91 rapid alkalinization factor 1[more]
AT3G05490.11.9e-2566.22 ralf-like 22[more]
AT3G16570.11.7e-2345.16 rapid alkalinization factor 23[more]
AT2G33775.11.2e-1642.99 ralf-like 19[more]
BLAST of Cucsa.205730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730402|ref|XP_011659776.1|6.0e-58100.00PREDICTED: rapid alkalinization factor [Cucumis sativus][more]
gi|659101540|ref|XP_008451660.1|8.9e-5493.75PREDICTED: rapid alkalinization factor-like [Cucumis melo][more]
gi|567903596|ref|XP_006444286.1|3.8e-2858.82hypothetical protein CICLE_v10023750mg [Citrus clementina][more]
gi|700197639|gb|KGN52797.1|4.9e-2858.18hypothetical protein Csa_4G001640 [Cucumis sativus][more]
gi|823188148|ref|XP_012490418.1|6.4e-2860.17PREDICTED: protein RALF-like 33 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0007267 cell-cell signaling
cellular_component GO:0005575 cellular_component
cellular_component GO:0048046 apoplast
cellular_component GO:0005622 intracellular
molecular_function GO:0003674 molecular_function
molecular_function GO:0005179 hormone activity
molecular_function GO:0004871 signal transducer activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.205730.1Cucsa.205730.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 58..118
score: 1.5
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 14..119
score: 7.6
NoneNo IPR availablePANTHERPTHR33136:SF4SUBFAMILY NOT NAMEDcoord: 14..119
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.205730Cla015049Watermelon (97103) v1cgywmB402
Cucsa.205730Cla021738Watermelon (97103) v1cgywmB405
Cucsa.205730Cla001316Watermelon (97103) v1cgywmB404
Cucsa.205730Csa4G001640Cucumber (Chinese Long) v2cgycuB311
Cucsa.205730Csa7G396340Cucumber (Chinese Long) v2cgycuB312
Cucsa.205730MELO3C016020Melon (DHL92) v3.5.1cgymeB371
Cucsa.205730MELO3C017971Melon (DHL92) v3.5.1cgymeB372
Cucsa.205730ClCG10G010660Watermelon (Charleston Gray)cgywcgB381
Cucsa.205730ClCG09G006060Watermelon (Charleston Gray)cgywcgB379
Cucsa.205730CSPI04G00690Wild cucumber (PI 183967)cgycpiB324
Cucsa.205730CSPI07G17290Wild cucumber (PI 183967)cgycpiB325
Cucsa.205730CmaCh17G011040Cucurbita maxima (Rimu)cgycmaB0606
Cucsa.205730CmoCh14G009220Cucurbita moschata (Rifu)cgycmoB0607
Cucsa.205730CmoCh17G010790Cucurbita moschata (Rifu)cgycmoB0608
Cucsa.205730Lsi02G023850Bottle gourd (USVL1VR-Ls)cgylsiB351
Cucsa.205730Lsi03G010550Bottle gourd (USVL1VR-Ls)cgylsiB352
Cucsa.205730Cp4.1LG12g05450Cucurbita pepo (Zucchini)cgycpeB0579
Cucsa.205730MELO3C017971.2Melon (DHL92) v3.6.1cgymedB369
Cucsa.205730MELO3C016020.2Melon (DHL92) v3.6.1cgymedB368
Cucsa.205730CsaV3_4G000650Cucumber (Chinese Long) v3cgycucB329
Cucsa.205730Cla97C10G193640Watermelon (97103) v2cgywmbB382
Cucsa.205730Cla97C09G168610Watermelon (97103) v2cgywmbB383
Cucsa.205730Bhi01G000714Wax gourdcgywgoB430
Cucsa.205730Carg07186Silver-seed gourdcarcgyB0132
Cucsa.205730Carg11125Silver-seed gourdcarcgyB0932
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.205730Cucsa.097250Cucumber (Gy14) v1cgycgyB035
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.205730Cucurbita pepo (Zucchini)cgycpeB0580
Cucsa.205730Cucumber (Chinese Long) v3cgycucB330
Cucsa.205730Wax gourdcgywgoB432
Cucsa.205730Cucurbita maxima (Rimu)cgycmaB0608
Cucsa.205730Cucurbita moschata (Rifu)cgycmoB0610