Carg11125 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11125
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Rapid ALkalinization Factor
Location	Cucurbita_argyrosperma_scaffold_013 : 37134 .. 37499 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAACTCTTCTTCTCCACCTGCCTTCTTCTCTATGCTCATTTTCACCTTAGCCTTCTTTGTCTCTTCGTCCTCTTTAATGGTCGTGGCCATGAGTGGTGACCGTAGTCTTAGCTGGCTCTCGACTGAACCTCGATGCCATGGACGTTCGTTAAGTGAATGCATGATGAATGTTGAGCTTGAAATGGATTCTGAGATCAATCGTCGTATCTTAGCCACTTCAAGTTACATAAGTTACAAGTCGTTGAAGGCGAACAACATTCCATGCTCTCGACGAGGTTCGTCCTACTACAATTGCCAGCCCGGGGCTGAAGCTAACCCCTATCAGCGGGGTTGTACTGTCATTACTCGTTGCAGAAGCTAA

mRNA sequence

ATGGGCAACTCTTCTTCTCCACCTGCCTTCTTCTCTATGCTCATTTTCACCTTAGCCTTCTTTGTCTCTTCGTCCTCTTTAATGGTCGTGGCCATGAGTGGTGACCGTAGTCTTAGCTGGCTCTCGACTGAACCTCGATGCCATGGACGTTCGTTAAGTGAATGCATGATGAATGTTGAGCTTGAAATGGATTCTGAGATCAATCGTCGTATCTTAGCCACTTCAAGTTACATAAGTTACAAGTCGTTGAAGGCGAACAACATTCCATGCTCTCGACGAGGTTCGTCCTACTACAATTGCCAGCCCGGGGCTGAAGCTAACCCCTATCAGCGGGGTTGTACTGTCATTACTCGTTGCAGAAGCTAA

Coding sequence (CDS)

ATGGGCAACTCTTCTTCTCCACCTGCCTTCTTCTCTATGCTCATTTTCACCTTAGCCTTCTTTGTCTCTTCGTCCTCTTTAATGGTCGTGGCCATGAGTGGTGACCGTAGTCTTAGCTGGCTCTCGACTGAACCTCGATGCCATGGACGTTCGTTAAGTGAATGCATGATGAATGTTGAGCTTGAAATGGATTCTGAGATCAATCGTCGTATCTTAGCCACTTCAAGTTACATAAGTTACAAGTCGTTGAAGGCGAACAACATTCCATGCTCTCGACGAGGTTCGTCCTACTACAATTGCCAGCCCGGGGCTGAAGCTAACCCCTATCAGCGGGGTTGTACTGTCATTACTCGTTGCAGAAGCTAA

Protein sequence

MGNSSSPPAFFSMLIFTLAFFVSSSSLMVVAMSGDRSLSWLSTEPRCHGRSLSECMMNVELEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCRS

Homology

[Close]

BLAST of Carg11125 vs. NCBI nr
Match: XP_022934551.1 (protein RALF-like 1 [Cucurbita moschata])

HSP 1 Score: 204.9 bits (520), Expect = 1.5e-49
Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MGNSSSPPAFXXXXXXXXXXXXXXXXLMVVAMSGDRSLSWLSTEPRCHGRSLSECMMNVE 60
           MGNSSSPPAFXXXXXXXXXXXXXXXXLMVVAMSGDRSLSWLSTE RCHGRSLSECMM+VE
Sbjct: 1   MGNSSSPPAFXXXXXXXXXXXXXXXXLMVVAMSGDRSLSWLSTEARCHGRSLSECMMDVE 60

Query: 61  LEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120
            EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of Carg11125 vs. NCBI nr
Match: XP_023529110.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.8 bits (517), Expect = 3.4e-49
Identity = 101/121 (83.47%), Postives = 102/121 (84.30%), Query Frame = 0


Query: 1   MGNSSSPPAFXXXXXXXXXXXXXXXXLMVVAMSGDRSLSWLSTEPRCHGRSLSECMMNVE 60
           MGNSSSPPAF                LMV+AMSGD SLSWLSTE RCHGRSLSECMMNVE
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVYSSSLMVMAMSGDHSLSWLSTEARCHGRSLSECMMNVE 60

Query: 61  LEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120
            EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of Carg11125 vs. NCBI nr
Match: XP_022983404.1 (protein RALF-like 1 [Cucurbita maxima])

HSP 1 Score: 203.4 bits (516), Expect = 4.5e-49
Identity = 101/121 (83.47%), Postives = 102/121 (84.30%), Query Frame = 0


Query: 1   MGNSSSPPAFXXXXXXXXXXXXXXXXLMVVAMSGDRSLSWLSTEPRCHGRSLSECMMNVE 60
           MGNSSSPPAF                LMV+AMSGDRSLSWLSTE RCHGR LSECMMNVE
Sbjct: 1   MGNSSSPPAFFSMLIFTIAFFVSSSSLMVMAMSGDRSLSWLSTEARCHGRLLSECMMNVE 60

Query: 61  LEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120
            EMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR
Sbjct: 61  FEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]

BLAST of Carg11125 vs. NCBI nr
Match: KGN52797.1 (hypothetical protein Csa_4G001640 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.9e-39
Identity = 79/87 (90.80%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 35  DRSLSWLSTEPRCHGRSLSECMMNVELEMDSEINRRILATSSYISYKSLKANNIPCSRRG 94
           DRSL+WLSTE RCHGRS+SECMM++E EMDSEINRRILATSSYISYKSL+ANNIPCSRRG
Sbjct: 36  DRSLNWLSTEARCHGRSISECMMHIEFEMDSEINRRILATSSYISYKSLRANNIPCSRRG 95

Query: 95  SSYYNCQPGAEANPYQRGCTVITRCRS 122
           SSYYNCQPGAEANPYQRGCT ITRCRS
Sbjct: 96  SSYYNCQPGAEANPYQRGCTAITRCRS 122

[Close]

BLAST of Carg11125 vs. NCBI nr
Match: XP_022846470.1 (protein RALF-like 33 [Olea europaea var. sylvestris])

HSP 1 Score: 133.3 bits (334), Expect = 5.7e-28
Identity = 59/95 (62.11%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 27  LMVVAMSGDRSLSWLSTEPRCHGRSLSECMMNVELEMDSEINRRILATSSYISYKSLKAN 86
           L+    +GD   SW+  +PRC+G SL++C+   E EMDSEINRRILAT+ YISY +L+AN
Sbjct: 30  LIASVNAGDNEFSWMDVKPRCNG-SLADCIDGGEFEMDSEINRRILATTKYISYGALQAN 89

Query: 87  NIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCRS 122
           N+PCSRRG+SYYNC+PGA+ANPY RGC+ +T+CRS
Sbjct: 90  NVPCSRRGASYYNCRPGAQANPYTRGCSAVTQCRS 123

[Close]

BLAST of Carg11125 vs. TAIR10
Match: AT1G02900.1 (rapid alkalinization factor 1)

HSP 1 Score: 115.5 bits (288), Expect = 2.2e-26
Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 38  LSWLSTEPR---CHGRSLSECMMNVELEMDSEINRRILATSSYISYKSLKANNIPCSRRG 97
           ++W +T      CHG S++EC+   E EMDSEINRRILAT+ YISY+SLK N++PCSRRG
Sbjct: 35  VAWATTGDNGSGCHG-SIAECIGAEEEEMDSEINRRILATTKYISYQSLKRNSVPCSRRG 94

Query: 98  SSYYNCQPGAEANPYQRGCTVITRCRS 122
           +SYYNCQ GA+ANPY RGC+ I RCRS
Sbjct: 95  ASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Carg11125 vs. TAIR10
Match: AT4G15800.1 (ralf-like 33)

HSP 1 Score: 110.9 bits (276), Expect = 5.5e-25
Identity = 52/96 (54.17%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 28  MVVAMSGDRSLSWLSTEPRCHGRSLSECMMNV---ELEMDSEINRRILATSSYISYKSLK 87
           +  A++   S  ++  E +C+G +++EC ++    E EMDSEINRRILAT+ YISY +L+
Sbjct: 21  LFAAVTSQSSGDFVPIESKCNG-TIAECSLSTAEEEFEMDSEINRRILATTKYISYGALR 80

Query: 88  ANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 121
            N +PCSRRG+SYYNC+ GA+ANPY RGC+ ITRCR
Sbjct: 81  RNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Carg11125 vs. TAIR10
Match: AT3G16570.1 (rapid alkalinization factor 23)

HSP 1 Score: 102.4 bits (254), Expect = 1.9e-22
Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 57  MNVELEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVI 116
           M  E EMDSEINRRILAT  YISY +L+ N IPCSRRG+SYYNC+ GA+ANPY RGC+ I
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

Query: 117 TRCR 121
           TRCR
Sbjct: 133 TRCR 136

[Close]

BLAST of Carg11125 vs. TAIR10
Match: AT3G05490.1 (ralf-like 22)

HSP 1 Score: 99.0 bits (245), Expect = 2.1e-21
Identity = 46/75 (61.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 47  CHGRSLSECMM-NVELEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAE 106
           C G S++EC+    E+E DS+I+RRILA   YISY +++ N++PCSRRG+SYYNCQ GA+
Sbjct: 45  CTG-SIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 107 ANPYQRGCTVITRCR 121
           ANPY RGC+ ITRCR
Sbjct: 105 ANPYSRGCSTITRCR 118

[Close]

BLAST of Carg11125 vs. TAIR10
Match: AT2G33775.1 (ralf-like 19)

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-16
Identity = 46/94 (48.94%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 27  LMVVAMSGDRSLSWLSTEPRCHGRSLSECMMNVELEMDSEINRRILAT-SSYISYKSLKA 86
           L VVA S   + +W  T+   +G+        ++  MDSE NRR LA   SYISY +L+ 
Sbjct: 14  LAVVAESA--NATWTLTKSCVNGQGCIGEDGELDYLMDSETNRRQLAARRSYISYGALRK 73

Query: 87  NNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRC 120
           NN+PCSRRG SYY+C+    ANPY+RGC+VIT C
Sbjct: 74  NNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105

[Close]

BLAST of Carg11125 vs. Swiss-Prot
Match: sp|Q9SRY3|RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.0e-25
Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 38  LSWLSTEPR---CHGRSLSECMMNVELEMDSEINRRILATSSYISYKSLKANNIPCSRRG 97
           ++W +T      CHG S++EC+   E EMDSEINRRILAT+ YISY+SLK N++PCSRRG
Sbjct: 35  VAWATTGDNGSGCHG-SIAECIGAEEEEMDSEINRRILATTKYISYQSLKRNSVPCSRRG 94

Query: 98  SSYYNCQPGAEANPYQRGCTVITRCRS 122
           +SYYNCQ GA+ANPY RGC+ I RCRS
Sbjct: 95  ASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of Carg11125 vs. Swiss-Prot
Match: sp|Q8L9P8|RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.8e-24
Identity = 52/96 (54.17%), Postives = 72/96 (75.00%), Query Frame = 0


Query: 28  MVVAMSGDRSLSWLSTEPRCHGRSLSECMMNV---ELEMDSEINRRILATSSYISYKSLK 87
           +  A++   S  ++  E +C+G +++EC ++    E EMDSEINRRILAT+ YISY +L+
Sbjct: 21  LFAAVTSQSSGDFVPIESKCNG-TIAECSLSTAEEEFEMDSEINRRILATTKYISYGALR 80

Query: 88  ANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCR 121
            N +PCSRRG+SYYNC+ GA+ANPY RGC+ ITRCR
Sbjct: 81  RNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of Carg11125 vs. Swiss-Prot
Match: sp|Q945T0|RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.2e-22
Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 0


Query: 47  CHGRSLSECMM-NVELEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAE 106
           C G S+ EC+    E E+DSE NRRILAT  YISY +L+ N++PCSRRG+SYYNC+PGA+
Sbjct: 41  CKG-SIGECIAEEEEFELDSESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQ 100

Query: 107 ANPYQRGCTVITRCRS 122
           ANPY RGC+ ITRCRS
Sbjct: 101 ANPYSRGCSAITRCRS 115

[Close]

BLAST of Carg11125 vs. Swiss-Prot
Match: sp|Q9LUS7|RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.5e-21
Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 57  MNVELEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVI 116
           M  E EMDSEINRRILAT  YISY +L+ N IPCSRRG+SYYNC+ GA+ANPY RGC+ I
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

Query: 117 TRCR 121
           TRCR
Sbjct: 133 TRCR 136

[Close]

BLAST of Carg11125 vs. Swiss-Prot
Match: sp|Q9MA62|RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.9e-20
Identity = 46/75 (61.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 47  CHGRSLSECMM-NVELEMDSEINRRILATSSYISYKSLKANNIPCSRRGSSYYNCQPGAE 106
           C G S++EC+    E+E DS+I+RRILA   YISY +++ N++PCSRRG+SYYNCQ GA+
Sbjct: 45  CTG-SIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQ 104

Query: 107 ANPYQRGCTVITRCR 121
           ANPY RGC+ ITRCR
Sbjct: 105 ANPYSRGCSTITRCR 118

[Close]

BLAST of Carg11125 vs. TrEMBL
Match: tr|A0A0A0KWI2|A0A0A0KWI2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-39
Identity = 79/87 (90.80%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 35  DRSLSWLSTEPRCHGRSLSECMMNVELEMDSEINRRILATSSYISYKSLKANNIPCSRRG 94
           DRSL+WLSTE RCHGRS+SECMM++E EMDSEINRRILATSSYISYKSL+ANNIPCSRRG
Sbjct: 36  DRSLNWLSTEARCHGRSISECMMHIEFEMDSEINRRILATSSYISYKSLRANNIPCSRRG 95

Query: 95  SSYYNCQPGAEANPYQRGCTVITRCRS 122
           SSYYNCQPGAEANPYQRGCT ITRCRS
Sbjct: 96  SSYYNCQPGAEANPYQRGCTAITRCRS 122

[Close]

BLAST of Carg11125 vs. TrEMBL
Match: tr|A0A200QWN9|A0A200QWN9_9MAGN (Rapid ALkalinization Factor OS=Macleaya cordata OX=56857 GN=BVC80_8955g28 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-26
Identity = 60/99 (60.61%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 27  LMVVAMSGDRSLSWL----STEPRCHGRSLSECMMNVELEMDSEINRRILATSSYISYKS 86
           +  V  +GD  L W+    S+   C G S++EC    E EMDSEI+RRILATS YISY++
Sbjct: 24  ISTVGATGDHQLGWIPTRSSSSSTCEG-SIAECQSENEFEMDSEISRRILATSQYISYEA 83

Query: 87  LKANNIPCSRRGSSYYNCQPGAEANPYQRGCTVITRCRS 122
           LK N +PCSRRG+SYYNCQPGA+ANPY RGC+ ITRCRS
Sbjct: 84  LKKNTVPCSRRGASYYNCQPGAQANPYNRGCSAITRCRS 121

[Close]

BLAST of Carg11125 vs. TrEMBL
Match: tr|A0A1R3IW04|A0A1R3IW04_COCAP (Rapid ALkalinization Factor OS=Corchorus capsularis OX=210143 GN=CCACVL1_09503 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.0e-26
Identity = 60/94 (63.83%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 30  VAMSGDRS--LSWLSTEPRCHGRSLSECMMNVELEMDSEINRRILATSSYISYKSLKANN 89
           V  SGD+   L W+ T+  C G S++EC+   E E+DSEINRRILATS+YISY +L+ N 
Sbjct: 23  VDASGDQQQILGWIPTKSPCKG-SIAECLSGEEFELDSEINRRILATSNYISYGALQRNT 82

Query: 90  IPCSRRGSSYYNCQPGAEANPYQRGCTVITRCRS 122
           +PCSRRG+SYYNCQPGA+ANPY RGC+ ITRCRS
Sbjct: 83  VPCSRRGASYYNCQPGAQANPYSRGCSKITRCRS 115

[Close]

BLAST of Carg11125 vs. TrEMBL
Match: tr|A0A1R3K856|A0A1R3K856_9ROSI (Rapid ALkalinization Factor OS=Corchorus olitorius OX=93759 GN=COLO4_10515 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.0e-26
Identity = 60/94 (63.83%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 30  VAMSGDRS--LSWLSTEPRCHGRSLSECMMNVELEMDSEINRRILATSSYISYKSLKANN 89
           V  SGD+   L W+ T+  C G S++EC+   E E+DSEINRRILATS+YISY +L+ N 
Sbjct: 23  VDASGDQQQILGWIPTKSPCKG-SIAECLSGEEFELDSEINRRILATSNYISYGALQRNT 82

Query: 90  IPCSRRGSSYYNCQPGAEANPYQRGCTVITRCRS 122
           +PCSRRG+SYYNCQPGA+ANPY RGC+ ITRCRS
Sbjct: 83  VPCSRRGASYYNCQPGAQANPYSRGCSKITRCRS 115

[Close]

BLAST of Carg11125 vs. TrEMBL
Match: tr|B9T0V9|B9T0V9_RICCO (RALFL33, putative OS=Ricinus communis OX=3988 GN=RCOM_1439830 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25
Identity = 57/87 (65.52%), Postives = 70/87 (80.46%), Query Frame = 0


Query: 35  DRSLSWLSTEPRCHGRSLSECMMNVELEMDSEINRRILATSSYISYKSLKANNIPCSRRG 94
           D  L+W+    RC G +L++CM   E +MDSEINRRILAT++YISY +L+ N IPCS+RG
Sbjct: 31  DHKLNWVPKTSRCQG-TLADCMQEDEFDMDSEINRRILATTNYISYGALQRNTIPCSQRG 90

Query: 95  SSYYNCQPGAEANPYQRGCTVITRCRS 122
           +SYYNCQPGAEANPY RGC+ ITRCRS
Sbjct: 91  ASYYNCQPGAEANPYSRGCSAITRCRS 116

The following BLAST results are available for this feature:

BLAST of Carg11125 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934551.1	1.5e-49	97.52	protein RALF-like 1 [Cucurbita moschata]	[more]
XP_023529110.1	3.4e-49	83.47	protein RALF-like 33 [Cucurbita pepo subsp. pepo]	[more]
XP_022983404.1	4.5e-49	83.47	protein RALF-like 1 [Cucurbita maxima]	[more]
KGN52797.1	1.9e-39	90.80	hypothetical protein Csa_4G001640 [Cucumis sativus]	[more]
XP_022846470.1	5.7e-28	62.11	protein RALF-like 33 [Olea europaea var. sylvestris]	[more]

BLAST of Carg11125 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02900.1	2.2e-26	64.37	rapid alkalinization factor 1	[more]
AT4G15800.1	5.5e-25	54.17	ralf-like 33	[more]
AT3G16570.1	1.9e-22	73.44	rapid alkalinization factor 23	[more]
AT3G05490.1	2.1e-21	61.33	ralf-like 22	[more]
AT2G33775.1	2.1e-16	48.94	ralf-like 19	[more]

BLAST of Carg11125 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SRY3\|RLF1_ARATH	4.0e-25	64.37	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
sp\|Q8L9P8\|RLF33_ARATH	9.8e-24	54.17	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
sp\|Q945T0\|RALF_TOBAC	3.2e-22	65.79	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
sp\|Q9LUS7\|RLF23_ARATH	3.5e-21	73.44	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
sp\|Q9MA62\|RLF22_ARATH	3.9e-20	61.33	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of Carg11125 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KWI2\|A0A0A0KWI2_CUCSA	1.2e-39	90.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001640 PE=4 SV=1	[more]
tr\|A0A200QWN9\|A0A200QWN9_9MAGN	3.5e-26	60.61	Rapid ALkalinization Factor OS=Macleaya cordata OX=56857 GN=BVC80_8955g28 PE=4 S...	[more]
tr\|A0A1R3IW04\|A0A1R3IW04_COCAP	6.0e-26	63.83	Rapid ALkalinization Factor OS=Corchorus capsularis OX=210143 GN=CCACVL1_09503 P...	[more]
tr\|A0A1R3K856\|A0A1R3K856_9ROSI	6.0e-26	63.83	Rapid ALkalinization Factor OS=Corchorus olitorius OX=93759 GN=COLO4_10515 PE=4 ...	[more]
tr\|B9T0V9\|B9T0V9_RICCO	1.0e-25	65.52	RALFL33, putative OS=Ricinus communis OX=3988 GN=RCOM_1439830 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11125-RA	Carg11125-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 60..120 e-value: 6.3E-28 score: 97.3
None	No IPR available	PANTHER	PTHR33136:SF4	SUBFAMILY NOT NAMED	coord: 13..121
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 13..121

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11125	Cla001316	Watermelon (97103) v1	carwmB0816
Carg11125	Csa4G001640	Cucumber (Chinese Long) v2	carcuB0832
Carg11125	MELO3C017971	Melon (DHL92) v3.5.1	carmeB0813
Carg11125	CSPI07G17290	Wild cucumber (PI 183967)	carcpiB0855
Carg11125	CSPI04G00690	Wild cucumber (PI 183967)	carcpiB0854
Carg11125	Cucsa.097250	Cucumber (Gy14) v1	carcgyB0927
Carg11125	Cucsa.205730	Cucumber (Gy14) v1	carcgyB0932
Carg11125	CmaCh14G008930	Cucurbita maxima (Rimu)	carcmaB1132
Carg11125	CmaCh17G011040	Cucurbita maxima (Rimu)	carcmaB1133
Carg11125	CmoCh17G010790	Cucurbita moschata (Rifu)	carcmoB1103
Carg11125	CmoCh14G009220	Cucurbita moschata (Rifu)	carcmoB1102
Carg11125	Lsi03G010550	Bottle gourd (USVL1VR-Ls)	carlsiB748
Carg11125	Cp4.1LG12g05450	Cucurbita pepo (Zucchini)	carcpeB1143
Carg11125	CsGy7G015720	Cucumber (Gy14) v2	carcgybB0807
Carg11125	MELO3C017971.2	Melon (DHL92) v3.6.1	carmedB0824
Carg11125	CsaV3_4G000650	Cucumber (Chinese Long) v3	carcucB0857
Carg11125	Cla97C10G193640	Watermelon (97103) v2	carwmbB0851

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11125	Carg07186	Silver-seed gourd	carcarB133

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11125	Wax gourd	carwgoB0951
Carg11125	Cucumber (Gy14) v2	carcgybB0806
Carg11125	Cucurbita pepo (Zucchini)	carcpeB1147
Carg11125	Watermelon (Charleston Gray)	carwcgB0792