MELO3C016020 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C016020
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ralf-like 33, putative
Location	chr1 : 31218131 .. 31219038 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATATAAATGATTAAAGAAGTGGATTGTATAGACATACCGGGAAGAGCAAGAGAGAAAGCAACAATGGCCGCCAAGGTTTCTTTTCTTCTTCCAATTTTCTTACTAGTTGCTATCCTGACGGTCTCCTCCACGGCCACGACCCCGAGCTGGGTCCTAGGTGGAGCTCATGCTCGTTGTCACGGATCCATGGCAGAGTGTATGAAGGAAGATATTGAATTTGAGATGGACTCTGAGATCAACAGACGCATATTAGCAGATTTAAACTACATAAGCTATGATGCACTCAGGGCCAACTCAGTGCCATGCTCACGCAAAGGAGCATCTTACTACAACTGTCAGCCAGGTGCCGAGGCAAACCCCTATGACCGTGGCTGTAATGCTATTTCTCGTTGTCGAAGCTAACTAGCTGTGTTTACTGTTTCACCAGATATGGGTAGTAGTAGTTGTATGAAGTCATCATAGAGTATAATCATCACTATATTATCAATAAGAAATCATGCAGAAACAGCAAGTCCAAGTTTATATCATATTGCTCTTTTCTGTTTCATTCTAAGCATTGGTTTCAACTTCACAAAGGCAATAGCAAAAAGAGAATATTGCAACAAACTCATCAATAAAATGAAACTCTCAACTATTTCTAGGCAGAACCTTCATCTTTCTTCACTTCATCTGCAACTGACTTTGATGGAGGTAGTGGTGACGGAGAGCCCTCGACACCCATCTCGGCCTTTAGATCATTGATGCTCTGCTCCAATTCATTTATGCGGCTCCCCATCTCATCGAGTATATTCAAGTTAAAGAAAGCTTATTTACTATAAGTTAACTAATTACAATAAAGCTATCCTACAATCTACTTCTCTTCCAATGTATCTGAAACCCAAAGTTGTATTAGAAAGTCAAAACATTC

mRNA sequence

AATATAAATGATTAAAGAAGTGGATTGTATAGACATACCGGGAAGAGCAAGAGAGAAAGCAACAATGGCCGCCAAGGTTTCTTTTCTTCTTCCAATTTTCTTACTAGTTGCTATCCTGACGGTCTCCTCCACGGCCACGACCCCGAGCTGGGTCCTAGGTGGAGCTCATGCTCGTTGTCACGGATCCATGGCAGAGTGTATGAAGGAAGATATTGAATTTGAGATGGACTCTGAGATCAACAGACGCATATTAGCAGATTTAAACTACATAAGCTATGATGCACTCAGGGCCAACTCAGTGCCATGCTCACGCAAAGGAGCATCTTACTACAACTGTCAGCCAGGTGCCGAGGCAAACCCCTATGACCGTGGCTGTAATGCTATTTCTCGTTGTCGAAGCTAACTAGCTGTGTTTACTGTTTCACCAGATATGGGTAGTAGTAGTTGTATGAAGTCATCATAGAGTATAATCATCACTATATTATCAATAAGAAATCATGCAGAAACAGCAAGTCCAAGTTTATATCATATTGCTCTTTTCTGTTTCATTCTAAGCATTGGTTTCAACTTCACAAAGGCAATAGCAAAAAGAGAATATTGCAACAAACTCATCAATAAAATGAAACTCTCAACTATTTCTAGGCAGAACCTTCATCTTTCTTCACTTCATCTGCAACTGACTTTGATGGAGGTAGTGGTGACGGAGAGCCCTCGACACCCATCTCGGCCTTTAGATCATTGATGCTCTGCTCCAATTCATTTATGCGGCTCCCCATCTCATCGAGTATATTCAAGTTAAAGAAAGCTTATTTACTATAAGTTAACTAATTACAATAAAGCTATCCTACAATCTACTTCTCTTCCAATGTATCTGAAACCCAAAGTTGTATTAGAAAGTCAAAACATTC

Coding sequence (CDS)

ATGATTAAAGAAGTGGATTGTATAGACATACCGGGAAGAGCAAGAGAGAAAGCAACAATGGCCGCCAAGGTTTCTTTTCTTCTTCCAATTTTCTTACTAGTTGCTATCCTGACGGTCTCCTCCACGGCCACGACCCCGAGCTGGGTCCTAGGTGGAGCTCATGCTCGTTGTCACGGATCCATGGCAGAGTGTATGAAGGAAGATATTGAATTTGAGATGGACTCTGAGATCAACAGACGCATATTAGCAGATTTAAACTACATAAGCTATGATGCACTCAGGGCCAACTCAGTGCCATGCTCACGCAAAGGAGCATCTTACTACAACTGTCAGCCAGGTGCCGAGGCAAACCCCTATGACCGTGGCTGTAATGCTATTTCTCGTTGTCGAAGCTAA

Protein sequence

MIKEVDCIDIPGRAREKATMAAKVSFLLPIFLLVAILTVSSTATTPSWVLGGAHARCHGSMAECMKEDIEFEMDSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS*

Homology

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BLAST of MELO3C016020 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 4.6e-27
Identity = 61/109 (55.96%), Postives = 75/109 (68.81%), Query Frame = 1


Query: 28  LPIFLLVAILTVSSTATTPS----WVLGG-AHARCHGSMAECMKEDIEFEMDSEINRRIL 87
           L + +L+    +S  A   S    WV+   +   C GS+ EC+ E+ EFE+DSE NRRIL
Sbjct: 7   LILCVLIGAFFISMAAAGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSESNRRIL 66

Query: 88  ADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           A   YISY AL+ NSVPCSR+GASYYNC+PGA+ANPY RGC+AI+RCRS
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

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BLAST of MELO3C016020 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26
Identity = 60/108 (55.56%), Postives = 77/108 (71.30%), Query Frame = 1


Query: 29  PIFLLVAILTV----SSTATTPSWVLGGAHARCHGSMAECMKE--DIEFEMDSEINRRIL 88
           P+ +++AILTV    ++  +  S       ++C+G++AEC     + EFEMDSEINRRIL
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRIL 67

Query: 89  ADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCR 131
           A   YISY ALR N+VPCSR+GASYYNC+ GA+ANPY RGC+AI+RCR
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of MELO3C016020 vs. Swiss-Prot
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.6e-26
Identity = 62/115 (53.91%), Postives = 75/115 (65.22%), Query Frame = 1


Query: 30  IFLLVAILTVSSTATTP------------SWVLGGAHAR-CHGSMAECMKEDIEFEMDSE 89
           +FL + IL V   ++ P            +W   G +   CHGS+AEC+  + E EMDSE
Sbjct: 7   LFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEE-EMDSE 66

Query: 90  INRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           INRRILA   YISY +L+ NSVPCSR+GASYYNCQ GA+ANPY RGC+ I+RCRS
Sbjct: 67  INRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

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BLAST of MELO3C016020 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.3e-25
Identity = 57/112 (50.89%), Postives = 73/112 (65.18%), Query Frame = 1


Query: 30  IFLLVAILTVSSTATTPSWVLGGA-----------HARCHGSMAECMKEDIEFEMDSEIN 89
           I+ ++AIL +  +A   +   G +            + C GS+AEC+ E+ E E DS+I+
Sbjct: 7   IYAVIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDIS 66

Query: 90  RRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCR 131
           RRILA   YISY A+R NSVPCSR+GASYYNCQ GA+ANPY RGC+ I+RCR
Sbjct: 67  RRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of MELO3C016020 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-23
Identity = 59/124 (47.58%), Postives = 73/124 (58.87%), Query Frame = 1


Query: 27  LLPIFLLVAI----LTVSSTATTPSWVLGGAHARCHGSMAECMKEDI------------- 86
           +  I L++A+    + VSS +T  +         C G++AEC                  
Sbjct: 13  IFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGE 72

Query: 87  ---EFEMDSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAI 131
              EFEMDSEINRRILA   YISY ALR N++PCSR+GASYYNC+ GA+ANPY RGC+AI
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

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BLAST of MELO3C016020 vs. TrEMBL
Match: A0A0A0K607_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396340 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 6.8e-54
Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 20  MAAKVSFLLPIFLLVAILTVSSTATTPSWVLGGAHARCHGSMAECMKEDIEFEMDSEINR 79
           MA  VSFLLPIFLLVAILTVSSTA TPSWVL GAHARCHGSMAECM EDIEF+MDSEINR
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 60

Query: 80  RILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           RILADLNYISYDAL+ANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS
Sbjct: 61  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

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BLAST of MELO3C016020 vs. TrEMBL
Match: B9T0V9_RICCO (RALFL33, putative OS=Ricinus communis GN=RCOM_1439830 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-28
Identity = 65/112 (58.04%), Postives = 85/112 (75.89%), Query Frame = 1


Query: 26  FLLPIFLLVAILTVSSTATTPS------WVLGGAHARCHGSMAECMKEDIEFEMDSEINR 85
           FL   +LL++ L +S++    +      WV     +RC G++A+CM+ED EF+MDSEINR
Sbjct: 8   FLFTFYLLLSSLIISTSTVEATIDHKLNWV--PKTSRCQGTLADCMQED-EFDMDSEINR 67

Query: 86  RILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           RILA  NYISY AL+ N++PCS++GASYYNCQPGAEANPY RGC+AI+RCRS
Sbjct: 68  RILATTNYISYGALQRNTIPCSQRGASYYNCQPGAEANPYSRGCSAITRCRS 116

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BLAST of MELO3C016020 vs. TrEMBL
Match: A0A0D2TE37_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G129000 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.9e-28
Identity = 71/118 (60.17%), Postives = 85/118 (72.03%), Query Frame = 1


Query: 20  MAAKVSFLLPIFLL-VAILTVSSTATTP-----SWVLGGAHARCHGSMAECMKEDIEFEM 79
           MA    FLLP+ L+ VA++   ST  T      SW      + C GSMAECM ED EF+M
Sbjct: 1   MANPSCFLLPVSLIFVALIMALSTVDTSAEHHLSW--SPNKSGCQGSMAECMAED-EFDM 60

Query: 80  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           DSEINRRIL    YISY AL+ N+VPCS++GASYYNCQPGA+ANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILQTTQYISYGALQRNTVPCSQRGASYYNCQPGAQANPYNRGCSAITRCRS 115

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BLAST of MELO3C016020 vs. TrEMBL
Match: V4U5R6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023750mg PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.4e-28
Identity = 69/119 (57.98%), Postives = 85/119 (71.43%), Query Frame = 1


Query: 20  MAAKVSFLLPIFLLVAILTVSSTATTP-------SWVLGGAHARCHGSMAECMKEDIEFE 79
           MA  ++FLL ++L +A L + S+           SWV   A ARC GSMAECM ++ EF 
Sbjct: 1   MAKTLAFLLCVYLFLAALMMDSSTVVDAGVDQRLSWV--PAKARCQGSMAECMADE-EFG 60

Query: 80  MDSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           MDSEINRRILA   YISY AL+ +SVPCS++GASYYNC  GA+ANPY RGC+AI+RCRS
Sbjct: 61  MDSEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCRS 116

[Close]

BLAST of MELO3C016020 vs. TrEMBL
Match: A0A067H8J5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033577mg PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.4e-28
Identity = 69/119 (57.98%), Postives = 85/119 (71.43%), Query Frame = 1


Query: 20  MAAKVSFLLPIFLLVAILTVSSTATTP-------SWVLGGAHARCHGSMAECMKEDIEFE 79
           MA  ++FLL ++L +A L + S+           SWV   A ARC GSMAECM ++ EF 
Sbjct: 1   MAKTLAFLLCVYLFLAALMMDSSTVVDAGVDQRLSWV--PAKARCQGSMAECMADE-EFG 60

Query: 80  MDSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           MDSEINRRILA   YISY AL+ +SVPCS++GASYYNC  GA+ANPY RGC+AI+RCRS
Sbjct: 61  MDSEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCRS 116

[Close]

BLAST of MELO3C016020 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 120.6 bits (301), Expect = 7.5e-28
Identity = 60/108 (55.56%), Postives = 77/108 (71.30%), Query Frame = 1


Query: 29  PIFLLVAILTV----SSTATTPSWVLGGAHARCHGSMAECMKE--DIEFEMDSEINRRIL 88
           P+ +++AILTV    ++  +  S       ++C+G++AEC     + EFEMDSEINRRIL
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRIL 67

Query: 89  ADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCR 131
           A   YISY ALR N+VPCSR+GASYYNC+ GA+ANPY RGC+AI+RCR
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of MELO3C016020 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1)

HSP 1 Score: 118.2 bits (295), Expect = 3.7e-27
Identity = 62/115 (53.91%), Postives = 75/115 (65.22%), Query Frame = 1


Query: 30  IFLLVAILTVSSTATTP------------SWVLGGAHAR-CHGSMAECMKEDIEFEMDSE 89
           +FL + IL V   ++ P            +W   G +   CHGS+AEC+  + E EMDSE
Sbjct: 7   LFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEE-EMDSE 66

Query: 90  INRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           INRRILA   YISY +L+ NSVPCSR+GASYYNCQ GA+ANPY RGC+ I+RCRS
Sbjct: 67  INRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of MELO3C016020 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 115.5 bits (288), Expect = 2.4e-26
Identity = 57/112 (50.89%), Postives = 73/112 (65.18%), Query Frame = 1


Query: 30  IFLLVAILTVSSTATTPSWVLGGA-----------HARCHGSMAECMKEDIEFEMDSEIN 89
           I+ ++AIL +  +A   +   G +            + C GS+AEC+ E+ E E DS+I+
Sbjct: 7   IYAVIAILAIVISAVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDIS 66

Query: 90  RRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCR 131
           RRILA   YISY A+R NSVPCSR+GASYYNCQ GA+ANPY RGC+ I+RCR
Sbjct: 67  RRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of MELO3C016020 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 109.0 bits (271), Expect = 2.3e-24
Identity = 59/124 (47.58%), Postives = 73/124 (58.87%), Query Frame = 1


Query: 27  LLPIFLLVAI----LTVSSTATTPSWVLGGAHARCHGSMAECMKEDI------------- 86
           +  I L++A+    + VSS +T  +         C G++AEC                  
Sbjct: 13  IFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGE 72

Query: 87  ---EFEMDSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAI 131
              EFEMDSEINRRILA   YISY ALR N++PCSR+GASYYNC+ GA+ANPY RGC+AI
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

[Close]

BLAST of MELO3C016020 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 1


Query: 28  LPIFLLVAILTVSSTATTPS--WVLGGAHARCHGSMAECMKEDIEFEMDSEINRRILADL 87
           + I L++ +LT++  A + +  W L  +     G + E    ++++ MDSE NRR LA  
Sbjct: 3   IKILLILGLLTLAVVAESANATWTLTKSCVNGQGCIGE--DGELDYLMDSETNRRQLAAR 62

Query: 88  -NYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRC 130
            +YISY ALR N+VPCSR+G SYY+C+    ANPY RGC+ I+ C
Sbjct: 63  RSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105

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BLAST of MELO3C016020 vs. NCBI nr
Match: gi|659101540|ref|XP_008451660.1| (PREDICTED: rapid alkalinization factor-like [Cucumis melo])

HSP 1 Score: 231.5 bits (589), Expect = 8.6e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1


Query: 20  MAAKVSFLLPIFLLVAILTVSSTATTPSWVLGGAHARCHGSMAECMKEDIEFEMDSEINR 79
           MAAKVSFLLPIFLLVAILTVSSTATTPSWVLGGAHARCHGSMAECMKEDIEFEMDSEINR
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTATTPSWVLGGAHARCHGSMAECMKEDIEFEMDSEINR 60

Query: 80  RILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           RILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS
Sbjct: 61  RILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of MELO3C016020 vs. NCBI nr
Match: gi|778730402|ref|XP_011659776.1| (PREDICTED: rapid alkalinization factor [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 9.8e-54
Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 1


Query: 20  MAAKVSFLLPIFLLVAILTVSSTATTPSWVLGGAHARCHGSMAECMKEDIEFEMDSEINR 79
           MA  VSFLLPIFLLVAILTVSSTA TPSWVL GAHARCHGSMAECM EDIEF+MDSEINR
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 60

Query: 80  RILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           RILADLNYISYDAL+ANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS
Sbjct: 61  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of MELO3C016020 vs. NCBI nr
Match: gi|255582168|ref|XP_002531878.1| (PREDICTED: protein RALF-like 33 [Ricinus communis])

HSP 1 Score: 132.9 bits (333), Expect = 4.1e-28
Identity = 65/112 (58.04%), Postives = 85/112 (75.89%), Query Frame = 1


Query: 26  FLLPIFLLVAILTVSSTATTPS------WVLGGAHARCHGSMAECMKEDIEFEMDSEINR 85
           FL   +LL++ L +S++    +      WV     +RC G++A+CM+ED EF+MDSEINR
Sbjct: 8   FLFTFYLLLSSLIISTSTVEATIDHKLNWV--PKTSRCQGTLADCMQED-EFDMDSEINR 67

Query: 86  RILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           RILA  NYISY AL+ N++PCS++GASYYNCQPGAEANPY RGC+AI+RCRS
Sbjct: 68  RILATTNYISYGALQRNTIPCSQRGASYYNCQPGAEANPYSRGCSAITRCRS 116

[Close]

BLAST of MELO3C016020 vs. NCBI nr
Match: gi|823188148|ref|XP_012490418.1| (PREDICTED: protein RALF-like 33 [Gossypium raimondii])

HSP 1 Score: 132.1 bits (331), Expect = 7.1e-28
Identity = 71/118 (60.17%), Postives = 85/118 (72.03%), Query Frame = 1


Query: 20  MAAKVSFLLPIFLL-VAILTVSSTATTP-----SWVLGGAHARCHGSMAECMKEDIEFEM 79
           MA    FLLP+ L+ VA++   ST  T      SW      + C GSMAECM ED EF+M
Sbjct: 1   MANPSCFLLPVSLIFVALIMALSTVDTSAEHHLSW--SPNKSGCQGSMAECMAED-EFDM 60

Query: 80  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           DSEINRRIL    YISY AL+ N+VPCS++GASYYNCQPGA+ANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILQTTQYISYGALQRNTVPCSQRGASYYNCQPGAQANPYNRGCSAITRCRS 115

[Close]

BLAST of MELO3C016020 vs. NCBI nr
Match: gi|720043259|ref|XP_010269500.1| (PREDICTED: rapid alkalinization factor-like [Nelumbo nucifera])

HSP 1 Score: 131.7 bits (330), Expect = 9.2e-28
Identity = 68/118 (57.63%), Postives = 82/118 (69.49%), Query Frame = 1


Query: 19  TMAAKVSFLLPIFLLVAILTVSSTATTPS---WVLGGAHAR--CHGSMAECMKEDIEFEM 78
           TMA    F +   + V  L +SS+ T  +   + LG    R  C GSM ECM    EFEM
Sbjct: 22  TMATSSGFFVMFVVFVTALLISSSTTIDASGEYQLGWLPTRSTCQGSMEECMAGGNEFEM 81

Query: 79  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 132
           DSEINRRILA   YISY AL+ N+VPCSR+GASYYNC+PGA+ANPY+RGC+AI+RCRS
Sbjct: 82  DSEINRRILATSQYISYGALQRNTVPCSRRGASYYNCKPGAQANPYNRGCSAITRCRS 139

The following BLAST results are available for this feature:

BLAST of MELO3C016020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RALF_TOBAC	4.6e-27	55.96	Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1	[more]
RLF33_ARATH	1.3e-26	55.56	Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1	[more]
RLF1_ARATH	6.6e-26	53.91	Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1	[more]
RLF22_ARATH	4.3e-25	50.89	Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1	[more]
RLF23_ARATH	4.0e-23	47.58	Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1	[more]

BLAST of MELO3C016020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K607_CUCSA	6.8e-54	93.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396340 PE=4 SV=1	[more]
B9T0V9_RICCO	2.9e-28	58.04	RALFL33, putative OS=Ricinus communis GN=RCOM_1439830 PE=4 SV=1	[more]
A0A0D2TE37_GOSRA	4.9e-28	60.17	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G129000 PE=4 SV=1	[more]
V4U5R6_9ROSI	8.4e-28	57.98	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023750mg PE=4 SV=1	[more]
A0A067H8J5_CITSI	8.4e-28	57.98	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033577mg PE=4 SV=1	[more]

BLAST of MELO3C016020 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G15800.1	7.5e-28	55.56	ralf-like 33	[more]
AT1G02900.1	3.7e-27	53.91	rapid alkalinization factor 1	[more]
AT3G05490.1	2.4e-26	50.89	ralf-like 22	[more]
AT3G16570.1	2.3e-24	47.58	rapid alkalinization factor 23	[more]
AT2G33775.1	1.3e-16	42.86	ralf-like 19	[more]

BLAST of MELO3C016020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101540\|ref\|XP_008451660.1\|	8.6e-58	100.00	PREDICTED: rapid alkalinization factor-like [Cucumis melo]	[more]
gi\|778730402\|ref\|XP_011659776.1\|	9.8e-54	93.75	PREDICTED: rapid alkalinization factor [Cucumis sativus]	[more]
gi\|255582168\|ref\|XP_002531878.1\|	4.1e-28	58.04	PREDICTED: protein RALF-like 33 [Ricinus communis]	[more]
gi\|823188148\|ref\|XP_012490418.1\|	7.1e-28	60.17	PREDICTED: protein RALF-like 33 [Gossypium raimondii]	[more]
gi\|720043259\|ref\|XP_010269500.1\|	9.2e-28	57.63	PREDICTED: rapid alkalinization factor-like [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0007267	cell-cell signaling
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003714	transcription corepressor activity
molecular_function	GO:0005179	hormone activity
molecular_function	GO:0004871	signal transducer activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU45816	melon EST collection version 4.0	transcribed_cluster
MU61078	melon EST collection version 4.0	transcribed_cluster
MU64950	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016020T1	MELO3C016020T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU45816	MU45816	transcribed_cluster
MU61078	MU61078	transcribed_cluster
MU64950	MU64950	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 70..130 score: 8.3
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 1..131 score: 1.9
None	No IPR available	PANTHER	PTHR33136:SF4	SUBFAMILY NOT NAMED	coord: 1..131 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C016020	Csa7G396340	Cucumber (Chinese Long) v2	cumeB532
MELO3C016020	Cla015049	Watermelon (97103) v1	mewmB184
MELO3C016020	ClCG09G006060	Watermelon (Charleston Gray)	mewcgB162
MELO3C016020	Cla97C09G168610	Watermelon (97103) v2	mewmbB209
MELO3C016020	CSPI07G17290	Wild cucumber (PI 183967)	cpimeB540
MELO3C016020	Cucsa.205730	Cucumber (Gy14) v1	cgymeB371
MELO3C016020	CmaCh17G011040	Cucurbita maxima (Rimu)	cmameB320
MELO3C016020	CmoCh17G010790	Cucurbita moschata (Rifu)	cmomeB313
MELO3C016020	Lsi02G023850	Bottle gourd (USVL1VR-Ls)	lsimeB192
MELO3C016020	Cp4.1LG12g05450	Cucurbita pepo (Zucchini)	cpemeB118
MELO3C016020	CsGy7G015720	Cucumber (Gy14) v2	cgybmeB470
MELO3C016020	Carg07186	Silver-seed gourd	carmeB0110

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C016020	Cucurbita pepo (Zucchini)	cpemeB293
MELO3C016020	Cucumber (Chinese Long) v3	cucmeB550
MELO3C016020	Wax gourd	mewgoB254
MELO3C016020	Cucurbita maxima (Rimu)	cmameB831
MELO3C016020	Cucurbita moschata (Rifu)	cmomeB815