Csa7G396340 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G396340
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRapid alkalinization factor 2; contains IPR008801 (Rapid ALkalinization Factor)
LocationChr7 : 15195152 .. 15195589 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGTTTACCAATTCCAAGTAACCTGCTTGTATTTCAATATAAAAGATTAAAGTGGATTGTATAGATGACATACCAGGAAGAGCAAGAGAGAAAGTAACAATGGCCACCACGGTTTCTTTTCTTCTTCCAATTTTCTTACTAGTTGCTATCCTGACGGTCTCCTCCACCGCCAAGACACCAAGCTGGGTCCTAGATGGAGCTCATGCTCGTTGTCACGGATCCATGGCAGAGTGCATGATGGAAGATATCGAGTTTCAGATGGACTCTGAGATCAACAGACGCATATTGGCAGATTTAAACTACATAAGCTATGACGCACTCAAGGCCAACTCAGTGCCATGCTCACGCAAAGGAGCATCTTACTACAACTGTCAGCCAGGTGCCGAGGCAAACCCCTATGACCGTGGCTGTAATGCTATTTCTCGTTGTCGAAGCTAA

mRNA sequence

ATGGCCACCACGGTTTCTTTTCTTCTTCCAATTTTCTTACTAGTTGCTATCCTGACGGTCTCCTCCACCGCCAAGACACCAAGCTGGGTCCTAGATGGAGCTCATGCTCGTTGTCACGGATCCATGGCAGAGTGCATGATGGAAGATATCGAGTTTCAGATGGACTCTGAGATCAACAGACGCATATTGGCAGATTTAAACTACATAAGCTATGACGCACTCAAGGCCAACTCAGTGCCATGCTCACGCAAAGGAGCATCTTACTACAACTGTCAGCCAGGTGCCGAGGCAAACCCCTATGACCGTGGCTGTAATGCTATTTCTCGTTGTCGAAGCTAA

Coding sequence (CDS)

ATGGCCACCACGGTTTCTTTTCTTCTTCCAATTTTCTTACTAGTTGCTATCCTGACGGTCTCCTCCACCGCCAAGACACCAAGCTGGGTCCTAGATGGAGCTCATGCTCGTTGTCACGGATCCATGGCAGAGTGCATGATGGAAGATATCGAGTTTCAGATGGACTCTGAGATCAACAGACGCATATTGGCAGATTTAAACTACATAAGCTATGACGCACTCAAGGCCAACTCAGTGCCATGCTCACGCAAAGGAGCATCTTACTACAACTGTCAGCCAGGTGCCGAGGCAAACCCCTATGACCGTGGCTGTAATGCTATTTCTCGTTGTCGAAGCTAA

Protein sequence

MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS*
Homology
[Close]
BLAST of Csa7G396340 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.7e-27
Identity = 60/109 (55.05%), Postives = 75/109 (68.81%), Query Frame = 1 

Query: 9   LPIFLLVAILTVSSTAKTPS----WVLDG-AHARCHGSMAECMMEDIEFQMDSEINRRIL 68
           L + +L+    +S  A   S    WV+   +   C GS+ EC+ E+ EF++DSE NRRIL
Sbjct: 7   LILCVLIGAFFISMAAAGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSESNRRIL 66

Query: 69  ADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           A   YISY AL+ NSVPCSR+GASYYNC+PGA+ANPY RGC+AI+RCRS
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]
BLAST of Csa7G396340 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 2.5e-26
Identity = 58/108 (53.70%), Postives = 77/108 (71.30%), Query Frame = 1 

Query: 10  PIFLLVAILTV----SSTAKTPSWVLDGAHARCHGSMAECMME--DIEFQMDSEINRRIL 69
           P+ +++AILTV    ++     S       ++C+G++AEC +   + EF+MDSEINRRIL
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRIL 67

Query: 70  ADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCR 112
           A   YISY AL+ N+VPCSR+GASYYNC+ GA+ANPY RGC+AI+RCR
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]
BLAST of Csa7G396340 vs. Swiss-Prot
Match: RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.4e-26
Identity = 62/115 (53.91%), Postives = 74/115 (64.35%), Query Frame = 1 

Query: 11  IFLLVAILTVSSTAKTP------------SWVLDGAHAR-CHGSMAECMMEDIEFQMDSE 70
           +FL + IL V   +  P            +W   G +   CHGS+AEC+  + E +MDSE
Sbjct: 7   LFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEE-EMDSE 66

Query: 71  INRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           INRRILA   YISY +LK NSVPCSR+GASYYNCQ GA+ANPY RGC+ I+RCRS
Sbjct: 67  INRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]
BLAST of Csa7G396340 vs. Swiss-Prot
Match: RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-24
Identity = 49/74 (66.22%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 38  CHGSMAECMMEDIEFQMDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEA 97
           C GS+AEC+ E+ E + DS+I+RRILA   YISY A++ NSVPCSR+GASYYNCQ GA+A
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQA 104

Query: 98  NPYDRGCNAISRCR 112
           NPY RGC+ I+RCR
Sbjct: 105 NPYSRGCSTITRCR 118

[Close]
BLAST of Csa7G396340 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-22
Identity = 56/124 (45.16%), Postives = 71/124 (57.26%), Query Frame = 1 

Query: 8   LLPIFLLVAILTVSSTAKTPSWVLDGA----HARCHGSMAECMMEDI------------- 67
           +  I L++A+   S    + S    G        C G++AEC +                
Sbjct: 13  IFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGE 72

Query: 68  ---EFQMDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAI 112
              EF+MDSEINRRILA   YISY AL+ N++PCSR+GASYYNC+ GA+ANPY RGC+AI
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

[Close]
BLAST of Csa7G396340 vs. TrEMBL
Match: A0A0A0K607_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396340 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.9e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 60
           MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 60

Query: 61  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS
Sbjct: 61  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]
BLAST of Csa7G396340 vs. TrEMBL
Match: A0A067H8J5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033577mg PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-28
Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1 

Query: 1   MATTVSFLLPIFLLVAILTVSSTAKTP-------SWVLDGAHARCHGSMAECMMEDIEFQ 60
           MA T++FLL ++L +A L + S+           SWV   A ARC GSMAECM ++ EF 
Sbjct: 1   MAKTLAFLLCVYLFLAALMMDSSTVVDAGVDQRLSWV--PAKARCQGSMAECMADE-EFG 60

Query: 61  MDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           MDSEINRRILA   YISY AL+ +SVPCS++GASYYNC  GA+ANPY RGC+AI+RCRS
Sbjct: 61  MDSEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCRS 116

[Close]
BLAST of Csa7G396340 vs. TrEMBL
Match: V4U5R6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023750mg PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-28
Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1 

Query: 1   MATTVSFLLPIFLLVAILTVSSTAKTP-------SWVLDGAHARCHGSMAECMMEDIEFQ 60
           MA T++FLL ++L +A L + S+           SWV   A ARC GSMAECM ++ EF 
Sbjct: 1   MAKTLAFLLCVYLFLAALMMDSSTVVDAGVDQRLSWV--PAKARCQGSMAECMADE-EFG 60

Query: 61  MDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           MDSEINRRILA   YISY AL+ +SVPCS++GASYYNC  GA+ANPY RGC+AI+RCRS
Sbjct: 61  MDSEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCRS 116

[Close]
BLAST of Csa7G396340 vs. TrEMBL
Match: A0A0A0KWI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001640 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-28
Identity = 64/110 (58.18%), Postives = 85/110 (77.27%), Query Frame = 1 

Query: 4   TVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHG-SMAECMMEDIEFQMDSEINRRI 63
           T++F +       ++T  S+ ++ +W+     ARCHG S++ECMM  IEF+MDSEINRRI
Sbjct: 16  TIAFFVSSSSSSLVVTTMSSDRSLNWL--STEARCHGRSISECMMH-IEFEMDSEINRRI 75

Query: 64  LADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           LA  +YISY +L+AN++PCSR+G+SYYNCQPGAEANPY RGC AI+RCRS
Sbjct: 76  LATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 122

[Close]
BLAST of Csa7G396340 vs. TrEMBL
Match: A0A0D2TE37_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G129000 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.2e-28
Identity = 71/118 (60.17%), Postives = 85/118 (72.03%), Query Frame = 1 

Query: 1   MATTVSFLLPIFLL-VAILTVSSTAKTP-----SWVLDGAHARCHGSMAECMMEDIEFQM 60
           MA    FLLP+ L+ VA++   ST  T      SW  +   + C GSMAECM ED EF M
Sbjct: 1   MANPSCFLLPVSLIFVALIMALSTVDTSAEHHLSWSPN--KSGCQGSMAECMAED-EFDM 60

Query: 61  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           DSEINRRIL    YISY AL+ N+VPCS++GASYYNCQPGA+ANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILQTTQYISYGALQRNTVPCSQRGASYYNCQPGAQANPYNRGCSAITRCRS 115

[Close]
BLAST of Csa7G396340 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 119.4 bits (298), Expect = 1.4e-27
Identity = 58/108 (53.70%), Postives = 77/108 (71.30%), Query Frame = 1 

Query: 10  PIFLLVAILTV----SSTAKTPSWVLDGAHARCHGSMAECMME--DIEFQMDSEINRRIL 69
           P+ +++AILTV    ++     S       ++C+G++AEC +   + EF+MDSEINRRIL
Sbjct: 8   PVAIIIAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRIL 67

Query: 70  ADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCR 112
           A   YISY AL+ N+VPCSR+GASYYNC+ GA+ANPY RGC+AI+RCR
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]
BLAST of Csa7G396340 vs. TAIR10
Match: AT1G02900.1 (AT1G02900.1 rapid alkalinization factor 1)

HSP 1 Score: 117.9 bits (294), Expect = 4.2e-27
Identity = 62/115 (53.91%), Postives = 74/115 (64.35%), Query Frame = 1 

Query: 11  IFLLVAILTVSSTAKTP------------SWVLDGAHAR-CHGSMAECMMEDIEFQMDSE 70
           +FL + IL V   +  P            +W   G +   CHGS+AEC+  + E +MDSE
Sbjct: 7   LFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEE-EMDSE 66

Query: 71  INRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           INRRILA   YISY +LK NSVPCSR+GASYYNCQ GA+ANPY RGC+ I+RCRS
Sbjct: 67  INRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]
BLAST of Csa7G396340 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 112.5 bits (280), Expect = 1.8e-25
Identity = 49/74 (66.22%), Postives = 59/74 (79.73%), Query Frame = 1 

Query: 38  CHGSMAECMMEDIEFQMDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEA 97
           C GS+AEC+ E+ E + DS+I+RRILA   YISY A++ NSVPCSR+GASYYNCQ GA+A
Sbjct: 45  CTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQA 104

Query: 98  NPYDRGCNAISRCR 112
           NPY RGC+ I+RCR
Sbjct: 105 NPYSRGCSTITRCR 118

[Close]
BLAST of Csa7G396340 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 105.9 bits (263), Expect = 1.6e-23
Identity = 56/124 (45.16%), Postives = 71/124 (57.26%), Query Frame = 1 

Query: 8   LLPIFLLVAILTVSSTAKTPSWVLDGA----HARCHGSMAECMMEDI------------- 67
           +  I L++A+   S    + S    G        C G++AEC +                
Sbjct: 13  IFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLFYGGGE 72

Query: 68  ---EFQMDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAI 112
              EF+MDSEINRRILA   YISY AL+ N++PCSR+GASYYNC+ GA+ANPY RGC+AI
Sbjct: 73  MGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAI 132

[Close]
BLAST of Csa7G396340 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 83.2 bits (204), Expect = 1.1e-16
Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 1 

Query: 9   LPIFLLVAILTVSSTAKTPS--WVLDGAHARCHGSMAECMMED--IEFQMDSEINRRILA 68
           + I L++ +LT++  A++ +  W L  +     G    C+ ED  +++ MDSE NRR LA
Sbjct: 3   IKILLILGLLTLAVVAESANATWTLTKSCVNGQG----CIGEDGELDYLMDSETNRRQLA 62

Query: 69  DL-NYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRC 111
              +YISY AL+ N+VPCSR+G SYY+C+    ANPY RGC+ I+ C
Sbjct: 63  ARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVITHC 105

[Close]
BLAST of Csa7G396340 vs. NCBI nr
Match: gi|778730402|ref|XP_011659776.1| (PREDICTED: rapid alkalinization factor [Cucumis sativus])

HSP 1 Score: 231.9 bits (590), Expect = 5.6e-58
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 1 

Query: 1   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 60
           MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 60

Query: 61  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS
Sbjct: 61  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]
BLAST of Csa7G396340 vs. NCBI nr
Match: gi|659101540|ref|XP_008451660.1| (PREDICTED: rapid alkalinization factor-like [Cucumis melo])

HSP 1 Score: 218.0 bits (554), Expect = 8.4e-54
Identity = 105/112 (93.75%), Postives = 107/112 (95.54%), Query Frame = 1 

Query: 1   MATTVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHGSMAECMMEDIEFQMDSEINR 60
           MA  VSFLLPIFLLVAILTVSSTA TPSWVL GAHARCHGSMAECM EDIEF+MDSEINR
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTATTPSWVLGGAHARCHGSMAECMKEDIEFEMDSEINR 60

Query: 61  RILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           RILADLNYISYDAL+ANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS
Sbjct: 61  RILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]
BLAST of Csa7G396340 vs. NCBI nr
Match: gi|567903596|ref|XP_006444286.1| (hypothetical protein CICLE_v10023750mg [Citrus clementina])

HSP 1 Score: 132.9 bits (333), Expect = 3.6e-28
Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1 

Query: 1   MATTVSFLLPIFLLVAILTVSSTAKTP-------SWVLDGAHARCHGSMAECMMEDIEFQ 60
           MA T++FLL ++L +A L + S+           SWV   A ARC GSMAECM ++ EF 
Sbjct: 1   MAKTLAFLLCVYLFLAALMMDSSTVVDAGVDQRLSWV--PAKARCQGSMAECMADE-EFG 60

Query: 61  MDSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           MDSEINRRILA   YISY AL+ +SVPCS++GASYYNC  GA+ANPY RGC+AI+RCRS
Sbjct: 61  MDSEINRRILATTKYISYGALQRDSVPCSQRGASYYNCHAGAQANPYSRGCSAITRCRS 116

[Close]
BLAST of Csa7G396340 vs. NCBI nr
Match: gi|700197639|gb|KGN52797.1| (hypothetical protein Csa_4G001640 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 4.6e-28
Identity = 64/110 (58.18%), Postives = 85/110 (77.27%), Query Frame = 1 

Query: 4   TVSFLLPIFLLVAILTVSSTAKTPSWVLDGAHARCHG-SMAECMMEDIEFQMDSEINRRI 63
           T++F +       ++T  S+ ++ +W+     ARCHG S++ECMM  IEF+MDSEINRRI
Sbjct: 16  TIAFFVSSSSSSLVVTTMSSDRSLNWL--STEARCHGRSISECMMH-IEFEMDSEINRRI 75

Query: 64  LADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           LA  +YISY +L+AN++PCSR+G+SYYNCQPGAEANPY RGC AI+RCRS
Sbjct: 76  LATSSYISYKSLRANNIPCSRRGSSYYNCQPGAEANPYQRGCTAITRCRS 122

[Close]
BLAST of Csa7G396340 vs. NCBI nr
Match: gi|823188148|ref|XP_012490418.1| (PREDICTED: protein RALF-like 33 [Gossypium raimondii])

HSP 1 Score: 132.1 bits (331), Expect = 6.1e-28
Identity = 71/118 (60.17%), Postives = 85/118 (72.03%), Query Frame = 1 

Query: 1   MATTVSFLLPIFLL-VAILTVSSTAKTP-----SWVLDGAHARCHGSMAECMMEDIEFQM 60
           MA    FLLP+ L+ VA++   ST  T      SW  +   + C GSMAECM ED EF M
Sbjct: 1   MANPSCFLLPVSLIFVALIMALSTVDTSAEHHLSWSPN--KSGCQGSMAECMAED-EFDM 60

Query: 61  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 113
           DSEINRRIL    YISY AL+ N+VPCS++GASYYNCQPGA+ANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILQTTQYISYGALQRNTVPCSQRGASYYNCQPGAQANPYNRGCSAITRCRS 115

The following BLAST results are available for this feature:
BLAST of Csa7G396340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RALF_TOBAC8.7e-2755.05Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1[more]
RLF33_ARATH2.5e-2653.70Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1[more]
RLF1_ARATH7.4e-2653.91Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1[more]
RLF22_ARATH3.1e-2466.22Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1[more]
RLF23_ARATH2.9e-2245.16Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1[more]
BLAST of Csa7G396340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K607_CUCSA3.9e-58100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G396340 PE=4 SV=1[more]
A0A067H8J5_CITSI2.5e-2858.82Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033577mg PE=4 SV=1[more]
V4U5R6_9ROSI2.5e-2858.82Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023750mg PE=4 SV=1[more]
A0A0A0KWI2_CUCSA3.2e-2858.18Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001640 PE=4 SV=1[more]
A0A0D2TE37_GOSRA4.2e-2860.17Uncharacterized protein OS=Gossypium raimondii GN=B456_007G129000 PE=4 SV=1[more]
BLAST of Csa7G396340 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15800.11.4e-2753.70 ralf-like 33[more]
AT1G02900.14.2e-2753.91 rapid alkalinization factor 1[more]
AT3G05490.11.8e-2566.22 ralf-like 22[more]
AT3G16570.11.6e-2345.16 rapid alkalinization factor 23[more]
AT2G33775.11.1e-1642.99 ralf-like 19[more]
BLAST of Csa7G396340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730402|ref|XP_011659776.1|5.6e-58100.00PREDICTED: rapid alkalinization factor [Cucumis sativus][more]
gi|659101540|ref|XP_008451660.1|8.4e-5493.75PREDICTED: rapid alkalinization factor-like [Cucumis melo][more]
gi|567903596|ref|XP_006444286.1|3.6e-2858.82hypothetical protein CICLE_v10023750mg [Citrus clementina][more]
gi|700197639|gb|KGN52797.1|4.6e-2858.18hypothetical protein Csa_4G001640 [Cucumis sativus][more]
gi|823188148|ref|XP_012490418.1|6.1e-2860.17PREDICTED: protein RALF-like 33 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0007267 cell-cell signaling
cellular_component GO:0005575 cellular_component
cellular_component GO:0048046 apoplast
cellular_component GO:0005622 intracellular
molecular_function GO:0003674 molecular_function
molecular_function GO:0005179 hormone activity
molecular_function GO:0004871 signal transducer activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU123076cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G396340.1Csa7G396340.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU123076CU123076transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 51..111
score: 1.3
NoneNo IPR availablePANTHERPTHR33136FAMILY NOT NAMEDcoord: 7..112
score: 7.6
NoneNo IPR availablePANTHERPTHR33136:SF4SUBFAMILY NOT NAMEDcoord: 7..112
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G396340Cla021738Watermelon (97103) v1cuwmB588
Csa7G396340Cla001316Watermelon (97103) v1cuwmB574
Csa7G396340Cla015049Watermelon (97103) v1cuwmB568
Csa7G396340MELO3C016020Melon (DHL92) v3.5.1cumeB532
Csa7G396340ClCG10G010660Watermelon (Charleston Gray)cuwcgB531
Csa7G396340ClCG09G006060Watermelon (Charleston Gray)cuwcgB526
Csa7G396340Lsi02G023850Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G396340Lsi03G010550Bottle gourd (USVL1VR-Ls)culsiB516
Csa7G396340MELO3C016020.2Melon (DHL92) v3.6.1cumedB511
Csa7G396340Cla97C05G087570Watermelon (97103) v2cuwmbB539
Csa7G396340Cla97C09G168610Watermelon (97103) v2cuwmbB572
Csa7G396340Cla97C10G193640Watermelon (97103) v2cuwmbB517
Csa7G396340Bhi01G000714Wax gourdcuwgoB657
Csa7G396340CSPI07G17290Wild cucumber (PI 183967)cpicuB354
Csa7G396340Cucsa.205730Cucumber (Gy14) v1cgycuB312
Csa7G396340CmaCh17G011040Cucurbita maxima (Rimu)cmacuB388
Csa7G396340CmoCh17G010790Cucurbita moschata (Rifu)cmocuB378
Csa7G396340Cp4.1LG12g05450Cucurbita pepo (Zucchini)cpecuB161
Csa7G396340Carg07186Silver-seed gourdcarcuB0119
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa7G396340Csa4G001640Cucumber (Chinese Long) v2cucuB149
The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G396340Cucurbita maxima (Rimu)cmacuB914
Csa7G396340Cucurbita moschata (Rifu)cmocuB900
Csa7G396340Cucurbita pepo (Zucchini)cpecuB343
Csa7G396340Cucumber (Gy14) v2cgybcuB323
Csa7G396340Wax gourdcuwgoB650
Csa7G396340Wax gourdcuwgoB691