CsGy6G014610 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G014610
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein RALF-like 33
Location	Chr6 : 12808377 .. 12808733 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCTCACGCGTTTCTTCTCTCCTTGCCGTCTTCCTCATTCTCGCTCCTCATTTTGTCTTCTCCATGGCGGCCGCCGTCGATTTCTCTGGCGACCACGAGCTTCTCTTCGTTCCCACCACGTCCGATTTCTTCGACGACAACGATGATTTCGGTTTCGGAATGGAGTTCCAGATGGACTCTGAGATCAATCGCCGAATTCTGGCGACTACTCGTTACATAAGCTACGGTGCTCTTAGGAGGAACAATGTTCCTTGCTCTCGTCGTGGTGCTTCTTATTACAACTGCAGACCAGGTGCTCAGGCGAATCCTTACACCCGTGGTTGCAGCGCTATTACTCGCTGCAGAAGTTGA

mRNA sequence

ATGGGAATCTCACGCGTTTCTTCTCTCCTTGCCGTCTTCCTCATTCTCGCTCCTCATTTTGTCTTCTCCATGGCGGCCGCCGTCGATTTCTCTGGCGACCACGAGCTTCTCTTCGTTCCCACCACGTCCGATTTCTTCGACGACAACGATGATTTCGGTTTCGGAATGGAGTTCCAGATGGACTCTGAGATCAATCGCCGAATTCTGGCGACTACTCGTTACATAAGCTACGGTGCTCTTAGGAGGAACAATGTTCCTTGCTCTCGTCGTGGTGCTTCTTATTACAACTGCAGACCAGGTGCTCAGGCGAATCCTTACACCCGTGGTTGCAGCGCTATTACTCGCTGCAGAAGTTGA

Coding sequence (CDS)

ATGGGAATCTCACGCGTTTCTTCTCTCCTTGCCGTCTTCCTCATTCTCGCTCCTCATTTTGTCTTCTCCATGGCGGCCGCCGTCGATTTCTCTGGCGACCACGAGCTTCTCTTCGTTCCCACCACGTCCGATTTCTTCGACGACAACGATGATTTCGGTTTCGGAATGGAGTTCCAGATGGACTCTGAGATCAATCGCCGAATTCTGGCGACTACTCGTTACATAAGCTACGGTGCTCTTAGGAGGAACAATGTTCCTTGCTCTCGTCGTGGTGCTTCTTATTACAACTGCAGACCAGGTGCTCAGGCGAATCCTTACACCCGTGGTTGCAGCGCTATTACTCGCTGCAGAAGTTGA

Protein sequence

MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS

Homology

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BLAST of CsGy6G014610 vs. NCBI nr
Match: XP_004143090.1 (PREDICTED: protein RALF-like 33 [Cucumis sativus] >KGN47180.1 hypothetical protein Csa_6G194150 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 2.1e-59
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGMEFQM 60
           MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGMEFQM
Sbjct: 1   MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGMEFQM 60

Query: 61  DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS 119
           DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS
Sbjct: 61  DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS 118

[Close]

BLAST of CsGy6G014610 vs. NCBI nr
Match: XP_008458453.1 (PREDICTED: protein RALF-like 33 [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 1.0e-53
Identity = 110/119 (92.44%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MGISRV-SSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGMEFQ 60
           MGISRV SSLLA FLI+A HF+ SMAAAVDFSGDH+LLFVPTTSDFF+DNDDFGFGMEFQ
Sbjct: 1   MGISRVSSSLLAAFLIIAAHFLVSMAAAVDFSGDHKLLFVPTTSDFFNDNDDFGFGMEFQ 60

Query: 61  MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS 119
           MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY+RGCSAITRCRS
Sbjct: 61  MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS 119

[Close]

BLAST of CsGy6G014610 vs. NCBI nr
Match: XP_023547686.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191.0 bits (484), Expect = 2.2e-45
Identity = 96/127 (75.59%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 1   MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSD---------FFDDNDD 60
           MGISRVS+L+A F++LA HF+ S A A+DFSGD+E+LF PT S+            +NDD
Sbjct: 1   MGISRVSALIAAFVVLAAHFLISSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNNDD 60

Query: 61  FGFGMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 119
            GFGMEF+MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

[Close]

BLAST of CsGy6G014610 vs. NCBI nr
Match: XP_023006467.1 (protein RALF-like 33 [Cucurbita maxima])

HSP 1 Score: 188.0 bits (476), Expect = 1.9e-44
Identity = 97/127 (76.38%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSD--------FFDDN-DD 60
           MGISRVS+L+A F +LA HF+ S A A+DFSGD+E+LF PT S+        F   N DD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLISSATAIDFSGDNEILFAPTKSECRGSITECFLAGNYDD 60

Query: 61  FGFGMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 119
            GFGMEF+MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

[Close]

BLAST of CsGy6G014610 vs. NCBI nr
Match: XP_022959207.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 187.6 bits (475), Expect = 2.5e-44
Identity = 95/127 (74.80%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSD---------FFDDNDD 60
           MGISRVS+L+A F +LA HF+   AAA+DFSGD+E+LF PT S+            ++DD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60

Query: 61  FGFGMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 119
            GFGMEF+MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

[Close]

BLAST of CsGy6G014610 vs. TAIR10
Match: AT3G16570.1 (rapid alkalinization factor 23)

HSP 1 Score: 120.9 bits (302), Expect = 5.1e-28
Identity = 73/134 (54.48%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 2   GISRVSSLLAVFLILAPHFVFSMAAAV-----DFSGD--------HELLFVPTTSDFFDD 61
           G+SR S   A+F IL    V + + AV     +F+GD           +   + S    D
Sbjct: 3   GLSRNSGAAAIFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGD 62

Query: 62  NDDFGF-----GMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQA 118
             D  +     G EF+MDSEINRRILAT RYISYGALRRN +PCSRRGASYYNCR GAQA
Sbjct: 63  GGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQA 122

[Close]

BLAST of CsGy6G014610 vs. TAIR10
Match: AT4G15800.1 (ralf-like 33)

HSP 1 Score: 120.2 bits (300), Expect = 8.8e-28
Identity = 69/109 (63.30%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 12  VFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGM---EFQMDSEINRRI 71
           +  IL  HF+F+ A     SGD    FVP  S       +        EF+MDSEINRRI
Sbjct: 12  IIAILTVHFLFA-AVTSQSSGD----FVPIESKCNGTIAECSLSTAEEEFEMDSEINRRI 71

Query: 72  LATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 118
           LATT+YISYGALRRN VPCSRRGASYYNCR GAQANPY+RGCSAITRCR
Sbjct: 72  LATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of CsGy6G014610 vs. TAIR10
Match: AT1G02900.1 (rapid alkalinization factor 1)

HSP 1 Score: 107.8 bits (268), Expect = 4.5e-24
Identity = 50/62 (80.65%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 57  EFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRC 116
           E +MDSEINRRILATT+YISY +L+RN+VPCSRRGASYYNC+ GAQANPY+RGCS I RC
Sbjct: 59  EEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARC 118

Query: 117 RS 119
           RS
Sbjct: 119 RS 120

[Close]

BLAST of CsGy6G014610 vs. TAIR10
Match: AT3G05490.1 (ralf-like 22)

HSP 1 Score: 105.1 bits (261), Expect = 2.9e-23
Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 57  EFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRC 116
           E + DS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNC+ GAQANPY+RGCS ITRC
Sbjct: 58  EMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRC 117

Query: 117 R 118
           R
Sbjct: 118 R 118

[Close]

BLAST of CsGy6G014610 vs. TAIR10
Match: AT2G33775.1 (ralf-like 19)

HSP 1 Score: 89.0 bits (219), Expect = 2.2e-18
Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 56  MEFQMDSEINRRILATTR-YISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAIT 115
           +++ MDSE NRR LA  R YISYGALR+NNVPCSRRG SYY+C+   +ANPY RGCS IT
Sbjct: 44  LDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVIT 103

Query: 116 RC 117
            C
Sbjct: 104 HC 105

[Close]

BLAST of CsGy6G014610 vs. Swiss-Prot
Match: sp|Q9LUS7|RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.3e-27
Identity = 73/134 (54.48%), Postives = 85/134 (63.43%), Query Frame = 0


Query: 2   GISRVSSLLAVFLILAPHFVFSMAAAV-----DFSGD--------HELLFVPTTSDFFDD 61
           G+SR S   A+F IL    V + + AV     +F+GD           +   + S    D
Sbjct: 3   GLSRNSGAAAIFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGD 62

Query: 62  NDDFGF-----GMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQA 118
             D  +     G EF+MDSEINRRILAT RYISYGALRRN +PCSRRGASYYNCR GAQA
Sbjct: 63  GGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQA 122

[Close]

BLAST of CsGy6G014610 vs. Swiss-Prot
Match: sp|Q8L9P8|RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.6e-26
Identity = 69/109 (63.30%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 12  VFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGM---EFQMDSEINRRI 71
           +  IL  HF+F+ A     SGD    FVP  S       +        EF+MDSEINRRI
Sbjct: 12  IIAILTVHFLFA-AVTSQSSGD----FVPIESKCNGTIAECSLSTAEEEFEMDSEINRRI 71

Query: 72  LATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 118
           LATT+YISYGALRRN VPCSRRGASYYNCR GAQANPY+RGCSAITRCR
Sbjct: 72  LATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of CsGy6G014610 vs. Swiss-Prot
Match: sp|Q945T0|RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-24
Identity = 62/109 (56.88%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 12  VFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDN--DDFGFGMEFQMDSEINRRIL 71
           +  +L   F  SMAAA D SG ++ +    +      +  +      EF++DSE NRRIL
Sbjct: 8   ILCVLIGAFFISMAAAGD-SGAYDWVMPARSGGGCKGSIGECIAEEEEFELDSESNRRIL 67

Query: 72  ATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS 119
           AT +YISYGAL++N+VPCSRRGASYYNC+PGAQANPY+RGCSAITRCRS
Sbjct: 68  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of CsGy6G014610 vs. Swiss-Prot
Match: sp|Q9SRY3|RLF1_ARATH (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.1e-23
Identity = 50/62 (80.65%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 57  EFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRC 116
           E +MDSEINRRILATT+YISY +L+RN+VPCSRRGASYYNC+ GAQANPY+RGCS I RC
Sbjct: 59  EEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARC 118

Query: 117 RS 119
           RS
Sbjct: 119 RS 120

[Close]

BLAST of CsGy6G014610 vs. Swiss-Prot
Match: sp|Q9MA62|RLF22_ARATH (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.3e-22
Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 57  EFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRC 116
           E + DS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNC+ GAQANPY+RGCS ITRC
Sbjct: 58  EMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRC 117

Query: 117 R 118
           R
Sbjct: 118 R 118

[Close]

BLAST of CsGy6G014610 vs. TrEMBL
Match: tr|A0A0A0KBU7|A0A0A0KBU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G194150 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-59
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGMEFQM 60
           MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGMEFQM
Sbjct: 1   MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGMEFQM 60

Query: 61  DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS 119
           DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS
Sbjct: 61  DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS 118

[Close]

BLAST of CsGy6G014610 vs. TrEMBL
Match: tr|A0A1S3C7V8|A0A1S3C7V8_CUCME (protein RALF-like 33 OS=Cucumis melo OX=3656 GN=LOC103497855 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.6e-54
Identity = 110/119 (92.44%), Postives = 115/119 (96.64%), Query Frame = 0


Query: 1   MGISRV-SSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGMEFQ 60
           MGISRV SSLLA FLI+A HF+ SMAAAVDFSGDH+LLFVPTTSDFF+DNDDFGFGMEFQ
Sbjct: 1   MGISRVSSSLLAAFLIIAAHFLVSMAAAVDFSGDHKLLFVPTTSDFFNDNDDFGFGMEFQ 60

Query: 61  MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS 119
           MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY+RGCSAITRCRS
Sbjct: 61  MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS 119

[Close]

BLAST of CsGy6G014610 vs. TrEMBL
Match: tr|A0A2P5E484|A0A2P5E484_PARAD (Rapid ALkalinization Factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_008020 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.3e-29
Identity = 73/116 (62.93%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 9   LLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTS-------DFFDDNDDFGFGMEFQMD 68
           LLA+  ILA HF  + ++A+DF GDH+L ++ + S       +     DD    +E QM+
Sbjct: 13  LLAICAILAVHFALASSSALDFGGDHQLSWLSSGSVCRGSIAECLIAGDD---DLEMQMN 72

Query: 69  SEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 118
           SE NRRILAT+RYISYGALRRN VPCSRRGASYYNCRPGAQANPY+RGCSAITRCR
Sbjct: 73  SESNRRILATSRYISYGALRRNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR 125

[Close]

BLAST of CsGy6G014610 vs. TrEMBL
Match: tr|A5BUA5|A5BUA5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_037723 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 73/114 (64.04%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 7   SSLLAVFLILAPHFVFSMAAAVDFSGDH---ELLFVPTTSDFFDDNDDFGFGMEFQMDSE 66
           S+ + +  I+A H V + ++AVDFSGDH   +L ++P  S       +   G EF+MDSE
Sbjct: 5   SAFVLICAIMAVHMVLT-SSAVDFSGDHLQFQLGWIPARSACQGSIAECLAGEEFEMDSE 64

Query: 67  INRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 118
           INRRILA+ RYISYGAL RN+VPCSRRGASYYNCRPGAQANPYTRGCSAITRCR
Sbjct: 65  INRRILASKRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 117

[Close]

BLAST of CsGy6G014610 vs. TrEMBL
Match: tr|F6HDF3|F6HDF3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01490 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 73/114 (64.04%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 7   SSLLAVFLILAPHFVFSMAAAVDFSGDH---ELLFVPTTSDFFDDNDDFGFGMEFQMDSE 66
           S+ + +  I+A H V + ++AVDFSGDH   +L ++P  S       +   G EF+MDSE
Sbjct: 5   SAFVLICAIMAVHMVLT-SSAVDFSGDHLQFQLGWIPARSACQGSIAECLAGEEFEMDSE 64

Query: 67  INRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 118
           INRRILA+ RYISYGAL RN+VPCSRRGASYYNCRPGAQANPYTRGCSAITRCR
Sbjct: 65  INRRILASKRYISYGALSRNSVPCSRRGASYYNCRPGAQANPYTRGCSAITRCR 117

The following BLAST results are available for this feature:

BLAST of CsGy6G014610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143090.1	2.1e-59	100.00	PREDICTED: protein RALF-like 33 [Cucumis sativus] >KGN47180.1 hypothetical prote...	[more]
XP_008458453.1	1.0e-53	92.44	PREDICTED: protein RALF-like 33 [Cucumis melo]	[more]
XP_023547686.1	2.2e-45	75.59	protein RALF-like 33 [Cucurbita pepo subsp. pepo]	[more]
XP_023006467.1	1.9e-44	76.38	protein RALF-like 33 [Cucurbita maxima]	[more]
XP_022959207.1	2.5e-44	74.80	protein RALF-like 33 [Cucurbita moschata]	[more]

BLAST of CsGy6G014610 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G16570.1	5.1e-28	54.48	rapid alkalinization factor 23	[more]
AT4G15800.1	8.8e-28	63.30	ralf-like 33	[more]
AT1G02900.1	4.5e-24	80.65	rapid alkalinization factor 1	[more]
AT3G05490.1	2.9e-23	77.05	ralf-like 22	[more]
AT2G33775.1	2.2e-18	67.74	ralf-like 19	[more]

BLAST of CsGy6G014610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LUS7\|RLF23_ARATH	9.3e-27	54.48	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
sp\|Q8L9P8\|RLF33_ARATH	1.6e-26	63.30	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
sp\|Q945T0\|RALF_TOBAC	1.9e-24	56.88	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
sp\|Q9SRY3\|RLF1_ARATH	8.1e-23	80.65	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
sp\|Q9MA62\|RLF22_ARATH	5.3e-22	77.05	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of CsGy6G014610 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KBU7\|A0A0A0KBU7_CUCSA	1.4e-59	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G194150 PE=4 SV=1	[more]
tr\|A0A1S3C7V8\|A0A1S3C7V8_CUCME	6.6e-54	92.44	protein RALF-like 33 OS=Cucumis melo OX=3656 GN=LOC103497855 PE=4 SV=1	[more]
tr\|A0A2P5E484\|A0A2P5E484_PARAD	3.3e-29	62.93	Rapid ALkalinization Factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_00802...	[more]
tr\|A5BUA5\|A5BUA5_VITVI	1.3e-28	64.04	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_037723 PE=4 SV=1	[more]
tr\|F6HDF3\|F6HDF3_VITVI	1.3e-28	64.04	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01490 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009506	plasmodesma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004871	signal transducer activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G014610.1	CsGy6G014610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 57..117 e-value: 3.8E-31 score: 107.6
None	No IPR available	PANTHER	PTHR33136:SF5	PROTEIN RALF-LIKE 1	coord: 12..118
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 12..118

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G014610	Cla009305	Watermelon (97103) v1	cgybwmB506
CsGy6G014610	Cla021738	Watermelon (97103) v1	cgybwmB466
CsGy6G014610	Csa6G194150	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G014610	MELO3C021331	Melon (DHL92) v3.5.1	cgybmeB386
CsGy6G014610	ClCG06G005140	Watermelon (Charleston Gray)	cgybwcgB440
CsGy6G014610	CSPI06G14730	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G014610	CmaCh17G003240	Cucurbita maxima (Rimu)	cgybcmaB765
CsGy6G014610	CmaCh08G012260	Cucurbita maxima (Rimu)	cgybcmaB875
CsGy6G014610	CmoCh08G012000	Cucurbita moschata (Rifu)	cgybcmoB857
CsGy6G014610	CmoCh17G003110	Cucurbita moschata (Rifu)	cgybcmoB747
CsGy6G014610	Lsi09G014280	Bottle gourd (USVL1VR-Ls)	cgyblsiB368
CsGy6G014610	Cp4.1LG17g00620	Cucurbita pepo (Zucchini)	cgybcpeB787
CsGy6G014610	Cp4.1LG12g02690	Cucurbita pepo (Zucchini)	cgybcpeB734
CsGy6G014610	MELO3C021331.2	Melon (DHL92) v3.6.1	cgybmedB387
CsGy6G014610	CsaV3_6G017190	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G014610	Cla97C06G114640	Watermelon (97103) v2	cgybwmbB448
CsGy6G014610	Cla97C05G087570	Watermelon (97103) v2	cgybwmbB445
CsGy6G014610	Bhi01G000714	Wax gourd	cgybwgoB534
CsGy6G014610	Bhi12G001826	Wax gourd	cgybwgoB514
CsGy6G014610	Carg05502	Silver-seed gourd	carcgybB0081
CsGy6G014610	Carg18842	Silver-seed gourd	carcgybB0703

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None