ClCG05G010960 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G010960
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionFormin Homology 14 LENGTH=1230
LocationCG_Chr05 : 12644918 .. 12645325 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCTTCCGCCGCCATTTTACTCTCTCTTCCTTTCTTCATCCTGTTGGTCCACGCCCAAACCTCCTCTCCACAAAATCCCGACGCTGAAATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTCAACAACTACCGCCGCCGCCACCTCCTCCTCCTTGTACCCCAACTCTGCCGTCTCGACCACCGCCTCCTAGGTTTATTTATACATCATCGTCGTCTCCACCACCACCTCCAAGGTTTATTTATACTACCGGCATTCCCGGTGACCTCTACCAGGTCGATGCGAATAATCATTGGTATTACTTCTCCGGCACGACGGGGAAGCGGCCGGCCATGGCAGCGGTTGTGGTGGCGCTTGGCTGTGGAACTTTGCATCTCATGGGGTTTGGTAAGTGGTGA

mRNA sequence

ATGGCGCCTTCCGCCGCCATTTTACTCTCTCTTCCTTTCTTCATCCTGTTGGTCCACGCCCAAACCTCCTCTCCACAAAATCCCGACGCTGAAATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTCAACAACTACCGCCGCCGCCACCTCCTCCTCCTTGTACCCCAACTCTGCCGTCTCGACCACCGCCTCCTAGGTTTATTTATACATCATCGTCGTCTCCACCACCACCTCCAAGGTTTATTTATACTACCGGCATTCCCGGTGACCTCTACCAGGTCGATGCGAATAATCATTGGTATTACTTCTCCGGCACGACGGGGAAGCGGCCGGCCATGGCAGCGGTTGTGGTGGCGCTTGGCTGTGGAACTTTGCATCTCATGGGGTTTGGTAAGTGGTGA

Coding sequence (CDS)

ATGGCGCCTTCCGCCGCCATTTTACTCTCTCTTCCTTTCTTCATCCTGTTGGTCCACGCCCAAACCTCCTCTCCACAAAATCCCGACGCTGAAATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTCAACAACTACCGCCGCCGCCACCTCCTCCTCCTTGTACCCCAACTCTGCCGTCTCGACCACCGCCTCCTAGGTTTATTTATACATCATCGTCGTCTCCACCACCACCTCCAAGGTTTATTTATACTACCGGCATTCCCGGTGACCTCTACCAGGTCGATGCGAATAATCATTGGTATTACTTCTCCGGCACGACGGGGAAGCGGCCGGCCATGGCAGCGGTTGTGGTGGCGCTTGGCTGTGGAACTTTGCATCTCATGGGGTTTGGTAAGTGGTGA

Protein sequence

MAPSAAILLSLPFFILLVHAQTSSPQNPDAEIKCGSCPCSNPCVQQLPPPPPPPPCTPTLPSRPPPPRFIYTSSSSPPPPPRFIYTTGIPGDLYQVDANNHWYYFSGTTGKRPAMAAVVVALGCGTLHLMGFGKW
Homology
[Close]
BLAST of ClCG05G010960 vs. Swiss-Prot
Match: PRR12_MOUSE (Proline-rich protein 12 OS=Mus musculus GN=Prr12 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.2e-07
Identity = 28/60 (46.67%), Postives = 30/60 (50.00%), Query Frame = 1 

Query: 22   TSSPQNPDAEIKCGSCPCSNPCVQQLPPPPPPPPCTPTLPSRPPPPRFIYTSSSSPPPPP 81
            + +P+ P  E K    P   P  Q  PPPPPPPP  P LPS  P P     +SS PPPPP
Sbjct: 1436 SGTPEPPLLEEKPPPTPPPAPTPQPAPPPPPPPPPVPALPS--PTPLVTPVASSPPPPPP 1493


HSP 2 Score: 47.4 bits (111), Expect = 1.5e-04
Identity = 23/56 (41.07%), Postives = 22/56 (39.29%), Query Frame = 1 

Query: 25   PQNPDAEIKCGSCPCSNPCVQQLPPPPPPPPCTPTLPSRPPPPRFIYTSSSSPPPP 81
            P  P         P   P     PPPPPPPP  P LPS PPPP    T+     PP
Sbjct: 1466 PPPPPVPALPSPTPLVTPVASSPPPPPPPPPPPPALPSPPPPPPPAPTTVPPVAPP 1521

[Close]
BLAST of ClCG05G010960 vs. Swiss-Prot
Match: FH20_ARATH (Formin-like protein 20 OS=Arabidopsis thaliana GN=FH20 PE=2 SV=3)

HSP 1 Score: 52.0 bits (123), Expect = 6.0e-06
Identity = 21/34 (61.76%), Postives = 21/34 (61.76%), Query Frame = 1 

Query: 48   PPPPPPPPCTPTLPSRPPPPRFIYTSSSSPPPPP 82
            PPPPPPPP +   P  PPPP F + SS  PPPPP
Sbjct: 1016 PPPPPPPPPSYGSPPPPPPPPFSHVSSIPPPPPP 1049


HSP 2 Score: 49.7 bits (117), Expect = 3.0e-05
Identity = 27/61 (44.26%), Postives = 27/61 (44.26%), Query Frame = 1 

Query: 23   SSPQNPDAEIKCGSCPCSNPCVQQLPPPPPPPPCTPTL--PSRPPPPRFIYTSSSSPPPP 82
            S P  P      GS P   P       PPPPPP  P+   P  PPPP F + SS  PPPP
Sbjct: 989  SPPPPPPPPPSYGSPPPPPPPPPGYGSPPPPPPPPPSYGSPPPPPPPPFSHVSSIPPPPP 1048


HSP 3 Score: 43.1 bits (100), Expect = 2.8e-03
Identity = 22/47 (46.81%), Postives = 21/47 (44.68%), Query Frame = 1 

Query: 35   GSCPCSNPCVQQLPPPPPPPPCTPTLPSRPPPPRFIYTSSSSPPPPP 82
            GS P   P       PPPPPP  P+  S PPPP       S PPPPP
Sbjct: 975  GSPPPPPPPPPSYGSPPPPPPPPPSYGSPPPPPPPPPGYGSPPPPPP 1021


HSP 4 Score: 42.7 bits (99), Expect = 3.6e-03
Identity = 29/82 (35.37%), Postives = 33/82 (40.24%), Query Frame = 1 

Query: 20  AQTSSPQNPDAEIKCGSCPCSNPCVQQLPPPPPPPPCTPT-------LPSRPPPP--RFI 79
           +Q  SP  P       S   ++  +   PPPPPPPP           LP  PPPP  + +
Sbjct: 818 SQLPSPPPPPPPPPFASVRRNSETLLPPPPPPPPPPFASVRRNSETLLPPPPPPPPWKSL 877

Query: 80  Y-----------TSSSSPPPPP 82
           Y           TSSS PPPPP
Sbjct: 878 YASTFETHEACSTSSSPPPPPP 899


HSP 5 Score: 41.6 bits (96), Expect = 8.1e-03
Identity = 24/59 (40.68%), Postives = 26/59 (44.07%), Query Frame = 1 

Query: 46  QLPPPPPPPP---------CTPTLPSRPPPPRFIYTSSSS-----PPPPPRFIYTTGIP 91
           QLPPPPPPPP          T   P  PPPP F     +S     PPPPP   +++  P
Sbjct: 700 QLPPPPPPPPPFSSERPNSGTVLPPPPPPPPPFSSERPNSGTVLPPPPPPPLPFSSERP 758


HSP 6 Score: 32.3 bits (72), Expect = 4.9e+00
Identity = 16/36 (44.44%), Postives = 16/36 (44.44%), Query Frame = 1 

Query: 48  PPPPPPPPCTPTLPSRPPPPRFIYTSSSSPPPPPRF 84
           PPPPP P  +    S+ PPP         PPPPP F
Sbjct: 685 PPPPPLPTYSHYQTSQLPPP---------PPPPPPF 711

[Close]
BLAST of ClCG05G010960 vs. Swiss-Prot
Match: G3PT_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gapdhs PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.0e-06
Identity = 25/64 (39.06%), Postives = 28/64 (43.75%), Query Frame = 1 

Query: 37 CPCSNPC----------------VQQLPPPPPPPPCTPTLPSRPPPPRF---IYTSSSSP 82
          CPC  PC                V++ PPPPPPPP  P  P  PPPP+     +  +  P
Sbjct: 27 CPCPCPCPVIRPPPPKLEDPPPTVEEQPPPPPPPPPPPPPPPPPPPPQIEPDKFEEAPPP 86

[Close]
BLAST of ClCG05G010960 vs. Swiss-Prot
Match: PRR12_HUMAN (Proline-rich protein 12 OS=Homo sapiens GN=PRR12 PE=1 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 7.8e-06
Identity = 33/81 (40.74%), Postives = 38/81 (46.91%), Query Frame = 1 

Query: 1   MAPSAAILLSLPFFILLVHAQTSSPQNPDAEIKCGSCPCSNPCVQQLPPPPPPPPCTPTL 60
           +AP+AA+    P   L       +P+ P  E K    P   P  Q   PPPPPPP  P L
Sbjct: 603 LAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQP-QPPPPPPPPQPAL 662

Query: 61  PSRPPPPRFIYTSSSSPPPPP 82
           PS   PP  +  + SSPPPPP
Sbjct: 663 PS---PPPLVAPTPSSPPPPP 679


HSP 2 Score: 43.1 bits (100), Expect = 2.8e-03
Identity = 19/44 (43.18%), Postives = 20/44 (45.45%), Query Frame = 1 

Query: 38  PCSNPCVQQLPPPPPPPPCTPTLPSRPPPPRFIYTSSSSPPPPP 82
           P   P     PPPP PPP  P +PS PPPP       ++PP  P
Sbjct: 666 PLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEP 709


HSP 3 Score: 31.2 bits (69), Expect = 1.1e+01
Identity = 12/20 (60.00%), Postives = 10/20 (50.00%), Query Frame = 1 

Query: 45  QQLPPPPPPPPCTPTLPSRP 65
           Q  PPPPPPPP  P   S P
Sbjct: 215 QAAPPPPPPPPPPPAPASEP 234

[Close]
BLAST of ClCG05G010960 vs. TrEMBL
Match: A0A0A0L7R0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346900 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.7e-56
Identity = 106/150 (70.67%), Postives = 117/150 (78.00%), Query Frame = 1 

Query: 1   MAPSAAILLSLPFF---ILLVHAQTSSP-----QNPDAEIKCGSCPCSNPCVQQLPPPPP 60
           MAP AAILLS  F    +LL ++QTSSP     QNPDAEIKCGSCPCSNPC+QQL PPPP
Sbjct: 3   MAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 62

Query: 61  PPP-------CTPTLPSRPPPPRFIYTSSSSPPPPPRFIYTTGIPGDLYQVDANNHWYYF 120
           PPP       CTPT+ SRPPPPRFIYT+SS  PPPPRF YTTG+PG+LY++DANN WYYF
Sbjct: 63  PPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYF 122

Query: 121 SGTTGKRPAMAAVVVALGCGTLHLMGFGKW 136
           SGT   RP MAAV VA+GCG LHLMGF KW
Sbjct: 123 SGTRRTRPGMAAVAVAIGCGALHLMGFSKW 152

[Close]
BLAST of ClCG05G010960 vs. TrEMBL
Match: A0A068TX13_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032833001 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.9e-17
Identity = 48/102 (47.06%), Postives = 56/102 (54.90%), Query Frame = 1 

Query: 11  LPFFILLVHAQTSSPQNPDAEIKCGSCPCSNPCVQQLPPPPPP--PPCTPTLPSRPPPPR 70
           L  F L V     +P +PD   KCG CPC+NPC    PPPPPP  PP  P LP  PPPP+
Sbjct: 8   LVIFALAVPINGQAPGSPDEGNKCGGCPCNNPCPVPSPPPPPPTLPPPPPALPPPPPPPK 67

Query: 71  FIYTSSSSPP-----------PPPRFIYTTGIPGDLYQVDAN 100
              T +  PP           PP ++IY TG PG+LY VDAN
Sbjct: 68  KPPTPACPPPPGSSGWPVVPTPPSQYIYVTGPPGNLYPVDAN 109

[Close]
BLAST of ClCG05G010960 vs. TrEMBL
Match: A0A139A4D5_GONPR (Uncharacterized protein OS=Gonapodya prolifera JEL478 GN=M427DRAFT_72798 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.1e-06
Identity = 29/64 (45.31%), Postives = 35/64 (54.69%), Query Frame = 1 

Query: 28  PDAEIKC-GSCPCSNPCVQQLPPPPPPPPCTPTLPSRPPPPRFIYTSSSSPPPPPRFIYT 87
           PD + +C GSC C+     Q+PPPPPPPP  P  P  PPP      +   PPPPP F+  
Sbjct: 62  PDGQQRCPGSCDCTVSECIQIPPPPPPPPPPPIPPPPPPPIPPPPPTPVPPPPPPPFVPP 121

Query: 88  TGIP 91
           T  P
Sbjct: 122 TPPP 125

[Close]
BLAST of ClCG05G010960 vs. TrEMBL
Match: A0A139A4D5_GONPR (Uncharacterized protein OS=Gonapodya prolifera JEL478 GN=M427DRAFT_72798 PE=4 SV=1)

HSP 1 Score: 41.6 bits (96), Expect = 9.0e-01
Identity = 22/46 (47.83%), Postives = 23/46 (50.00%), Query Frame = 1 

Query: 38  PCSNPCVQQLPPPPPPPPCTPTLPSRPPPPRFIYTSSSSPP--PPP 82
           P   P    +PPPPPPP   PT P  PPP     T   SPP  PPP
Sbjct: 101 PIPPPPPTPVPPPPPPPFVPPTPPPPPPPSPPPTTPPVSPPASPPP 146


HSP 2 Score: 58.2 bits (139), Expect = 9.3e-06
Identity = 31/70 (44.29%), Postives = 36/70 (51.43%), Query Frame = 1 

Query: 22  TSSPQNPDAEIKCGSCPCSNPCVQQL-PPPPPPPPCTPTLPSRPPPPRFIYTSSSSPPPP 81
           T  P +P     C   P   PC     PPPPPPPPCT T  + PPPP    T++ +PP P
Sbjct: 35  TPPPPDPCTTTTCPPPPPPPPCTTTTCPPPPPPPPCTTTTCAPPPPPPCT-TTTCAPPEP 94

Query: 82  PRFIYTTGIP 91
           P  I TT  P
Sbjct: 95  PPCITTTCPP 103

[Close]
BLAST of ClCG05G010960 vs. TrEMBL
Match: A0A0R1EGJ2_DROYA (Uncharacterized protein OS=Drosophila yakuba GN=Dyak\GE16158 PE=4 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 4.0e-01
Identity = 21/44 (47.73%), Postives = 27/44 (61.36%), Query Frame = 1 

Query: 40 SNPCVQQLPP--PPPPPPCTPTLPSRPPPPRFIYTSSSSPPPPP 82
          ++P   + PP  PPPP PCT T    PPPP    T+++ PPPPP
Sbjct: 24 AHPPRSEEPPCTPPPPDPCTTTTCPPPPPPPPC-TTTTCPPPPP 66


HSP 2 Score: 42.0 bits (97), Expect = 6.9e-01
Identity = 24/61 (39.34%), Postives = 29/61 (47.54%), Query Frame = 1 

Query: 26  QNPDAEIKCGSCPCSNPCVQ--QLPPPPPPPPCTPTLPSRPP----PPRFIYTSSSSPPP 81
           + P     C   P   PC +    PPPPPPPPCT T P  PP    PP      +++P P
Sbjct: 139 RTPPPPPPCTRTPPPPPCHKPPPPPPPPPPPPCTKTPPCTPPCTTTPP-----CTTTPCP 194

[Close]
BLAST of ClCG05G010960 vs. TAIR10
Match: AT1G23040.1 (AT1G23040.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 72.4 bits (176), Expect = 2.4e-13
Identity = 37/88 (42.05%), Postives = 45/88 (51.14%), Query Frame = 1 

Query: 17  LVHAQTSSPQNPDAE-------IKCGSCPCSNPCVQQLPPPPPPPPCTPTLPSRPPPPRF 76
           L++  +SS  + +A        IKC      NP     PPP PPPP  P  P+ PPPP  
Sbjct: 27  LINGSSSSDASLEARKLDEVDPIKCSPSCIQNPPPPSPPPPSPPPPACPPPPALPPPPPK 86

Query: 77  IYTSSSSPPPPPRFIYTTGIPGDLYQVD 98
             +S   PPPP  F+Y TG PG+LY VD
Sbjct: 87  KVSSYCPPPPPANFLYITGPPGNLYPVD 114

[Close]
BLAST of ClCG05G010960 vs. TAIR10
Match: AT3G03350.2 (AT3G03350.2 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 2.7e-12
Identity = 31/71 (43.66%), Postives = 42/71 (59.15%), Query Frame = 1 

Query: 59  TLPSRPPPPRFIYTS-SSSPPPPPRFIYTTGIPGDLYQVDANNHWYYFSGTTGKRPAMAA 118
           T P RPPPPR  Y S SSS PPPP+++Y TG+PG+LY+ + ++ W Y S           
Sbjct: 25  TTPLRPPPPRKTYCSKSSSSPPPPKYMYVTGVPGELYRTEPDDQWGYNSSVNRNLVKCLL 84

Query: 119 VVVALGCGTLH 129
           V+V +G G ++
Sbjct: 85  VIVIVGFGVIN 95

[Close]
BLAST of ClCG05G010960 vs. TAIR10
Match: AT1G70990.1 (AT1G70990.1 proline-rich family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-11
Identity = 40/103 (38.83%), Postives = 52/103 (50.49%), Query Frame = 1 

Query: 2   APSAAILLSLPF--FILLVHAQTSSPQNPDAE--IKCGSCPCSNPCVQQLPPPPPPPPCT 61
           A +A +L ++ F  F ++++A  SS      E  IKC       PC+Q +PPP PPPP  
Sbjct: 48  ALAATLLTTVVFLTFPMIINASDSSTNRKLEEDPIKC------TPCLQNIPPPSPPPPSP 107

Query: 62  PTLPSRPPPPRFIYT---SSSSPPPPPRFIYTTGIPGDLYQVD 98
           P      PPP    +    S  PPPP  +IY TG PG+LY +D
Sbjct: 108 PPPSQACPPPPLPPSPPKKSYCPPPPSTYIYMTGPPGELYPID 144

[Close]
BLAST of ClCG05G010960 vs. TAIR10
Match: AT1G02405.1 (AT1G02405.1 proline-rich family protein)

HSP 1 Score: 60.8 bits (146), Expect = 7.2e-10
Identity = 37/102 (36.27%), Postives = 54/102 (52.94%), Query Frame = 1 

Query: 5   AAILLSLPFFILLVHAQTSSPQNPDAEIKCGSCPCSNPCVQQLPPP---PPPPPCTPT-L 64
           A ++L+ P   ++++A+ SS +    ++ C       PC+Q  PPP   PPPP CTP+  
Sbjct: 18  AIVILASP---IIINAEDSSAE---VDVNC------IPCLQNQPPPPPSPPPPSCTPSPP 77

Query: 65  PSRPPPPRFIYTSSS-----SPPPPPRFIYTTGIPGDLYQVD 98
           P  PPPP+      S      PPPPP +++T   PGDLY ++
Sbjct: 78  PPSPPPPKKSSCPPSPLPPPPPPPPPNYVFTYP-PGDLYPIE 106

[Close]
BLAST of ClCG05G010960 vs. TAIR10
Match: AT4G08370.1 (AT4G08370.1 Proline-rich extensin-like family protein)

HSP 1 Score: 53.9 bits (128), Expect = 8.8e-08
Identity = 36/112 (32.14%), Postives = 48/112 (42.86%), Query Frame = 1 

Query: 7   ILLSLPFFILLVHAQTS---SPQNPDAEIKCGSCPCSNPCVQQLPPP------------- 66
           ++L L F++++V        SPQ+P  +    S P  +P V + PPP             
Sbjct: 11  LMLVLAFYVVVVPTSAQCKYSPQSPPPQPYVYSPPLPSPYVYKSPPPSPYLYSSPPPPPY 70

Query: 67  -----PPPPPCTPTLPSR-------PPPPRFIYTSSSSPPPPPRFIYTTGIP 91
                PPPPP     P R       PPPP F+Y+S    PPPP +IY +  P
Sbjct: 71  VYNSPPPPPPYIYNSPPRPPYVYKSPPPPPFVYSS----PPPPTYIYNSPPP 118

[Close]
BLAST of ClCG05G010960 vs. NCBI nr
Match: gi|778680858|ref|XP_011651408.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis sativus])

HSP 1 Score: 224.9 bits (572), Expect = 8.2e-56
Identity = 106/150 (70.67%), Postives = 117/150 (78.00%), Query Frame = 1 

Query: 1   MAPSAAILLSLPFF---ILLVHAQTSSP-----QNPDAEIKCGSCPCSNPCVQQLPPPPP 60
           MAP AAILLS  F    +LL ++QTSSP     QNPDAEIKCGSCPCSNPC+QQL PPPP
Sbjct: 3   MAPYAAILLSFSFLSHLLLLANSQTSSPILVDPQNPDAEIKCGSCPCSNPCIQQLSPPPP 62

Query: 61  PPP-------CTPTLPSRPPPPRFIYTSSSSPPPPPRFIYTTGIPGDLYQVDANNHWYYF 120
           PPP       CTPT+ SRPPPPRFIYT+SS  PPPPRF YTTG+PG+LY++DANN WYYF
Sbjct: 63  PPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYF 122

Query: 121 SGTTGKRPAMAAVVVALGCGTLHLMGFGKW 136
           SGT   RP MAAV VA+GCG LHLMGF KW
Sbjct: 123 SGTRRTRPGMAAVAVAIGCGALHLMGFSKW 152

[Close]
BLAST of ClCG05G010960 vs. NCBI nr
Match: gi|590652126|ref|XP_007033069.1| (Uncharacterized protein TCM_019232 [Theobroma cacao])

HSP 1 Score: 116.7 bits (291), Expect = 3.1e-23
Identity = 61/134 (45.52%), Postives = 79/134 (58.96%), Query Frame = 1 

Query: 7   ILLSLPFFILLVHAQTSS---------PQNPDAEIKCGSCPCSNPCVQQLPPPPPPPPCT 66
           ++LS+ F I ++ A T           PQ P  EIKCG+CPC NPC QQ  PPPPPPP  
Sbjct: 19  LILSISFLIPII-ASTKKLEEIVPVVVPQAPTTEIKCGTCPCVNPCGQQSLPPPPPPP-- 78

Query: 67  PTLPSRPPPPRFIYTSS-SSPPPPPRFIYTTGIPGDLYQVDANNHWYYFSGTTGKRPAMA 126
              PS PPPPRF Y +     PPPPRF Y TG+PG LY  DA++ W +FS  +  R  + 
Sbjct: 79  ---PSPPPPPRFTYCNPVPMTPPPPRFYYVTGVPGQLYTADADDRWTFFS--SAGRDDIG 138

Query: 127 AVVVALGCGTLHLM 131
            ++++ G G L L+
Sbjct: 139 ILLLSFGFGLLGLL 144

[Close]
BLAST of ClCG05G010960 vs. NCBI nr
Match: gi|255584475|ref|XP_002532967.1| (PREDICTED: formin-like protein 3 [Ricinus communis])

HSP 1 Score: 112.8 bits (281), Expect = 4.5e-22
Identity = 57/108 (52.78%), Postives = 68/108 (62.96%), Query Frame = 1 

Query: 25  PQNPDAEIKCGSCPCSNPCVQQLPPPPPPPPCTPTLPSRPPPPRFIYTSSSSPPPPPRFI 84
           PQ PDA IKCGSCPC NPC  QLPPPPPPPP        PPPP+ +Y +  + PPPPRFI
Sbjct: 35  PQEPDAGIKCGSCPCVNPCA-QLPPPPPPPP--------PPPPKTVYCTPLA-PPPPRFI 94

Query: 85  YTTGIP--GDLYQVDANNHWYYFSGTTGKRPAMAAVVVALGCGTLHLM 131
           Y TG+P  G+LY  D   +W Y+S  T     ++  + A G G LHLM
Sbjct: 95  YVTGVPGNGNLYVTDPYENWDYYSDAT--HNVVSWFLAAFGFGVLHLM 130

[Close]
BLAST of ClCG05G010960 vs. NCBI nr
Match: gi|566211035|ref|XP_006372591.1| (hypothetical protein POPTR_0017s03030g [Populus trichocarpa])

HSP 1 Score: 112.5 bits (280), Expect = 5.9e-22
Identity = 53/119 (44.54%), Postives = 68/119 (57.14%), Query Frame = 1 

Query: 21  QTSSPQNPDAEIKCGSCPCSNPCVQQLPPPPPPPP---------CTPTLPSRPPPPRFIY 80
           QT  PQ PDA IKCGSCPC NPC Q  PPPPPPPP         CTP  P  PPPP   Y
Sbjct: 32  QTLVPQEPDAGIKCGSCPCVNPCGQLPPPPPPPPPPPPPPPTPYCTPLAPPPPPPPPTPY 91

Query: 81  TSSSSPPPPPRFIYTTGIPGDLYQVDANNHWYYFSGTTGKRPAMAAVVVALGCGTLHLM 131
            S  +PPPP  +  T+ +PG +Y+ D  N W  + G   ++ A+  +++ +G G   L+
Sbjct: 92  CSPLAPPPPRFYYVTSTVPGSVYETDPYNRWGLYDG--ARQNAVTWLLLLIGLGVTELL 148

[Close]
BLAST of ClCG05G010960 vs. NCBI nr
Match: gi|697159392|ref|XP_009588454.1| (PREDICTED: leucine-rich repeat extensin-like protein 1 [Nicotiana tomentosiformis])

HSP 1 Score: 106.7 bits (265), Expect = 3.3e-20
Identity = 56/129 (43.41%), Postives = 65/129 (50.39%), Query Frame = 1 

Query: 25  PQNPDAEIKCGSCPCSNPCVQQLPPP----PPPPP--------CTPTLPSRPPPPRFIY- 84
           P  PD  IKCG CPC  PC QQL PP    PPPPP        C P +   PP PRFIY 
Sbjct: 30  PLMPDPSIKCGECPCGKPCNQQLTPPISSSPPPPPPPKASNTYCPPVIQQNPPSPRFIYF 89

Query: 85  -------TSSSSPPPPPRFIYTTGIPGDLYQVDANNHWYYFSGTTGKRPAMAAVVVALGC 134
                   S  S PPPPRFIY T  PG+LY  D  N   Y    T     + ++++ +GC
Sbjct: 90  TAPPAIQQSKPSSPPPPRFIYFTAPPGNLYSTDPFNLQIYSGALTRNPLCLNSLLLLVGC 149

The following BLAST results are available for this feature:
BLAST of ClCG05G010960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRR12_MOUSE9.2e-0746.67Proline-rich protein 12 OS=Mus musculus GN=Prr12 PE=1 SV=1[more]
FH20_ARATH6.0e-0661.76Formin-like protein 20 OS=Arabidopsis thaliana GN=FH20 PE=2 SV=3[more]
G3PT_MOUSE6.0e-0639.06Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gap... [more]
PRR12_HUMAN7.8e-0640.74Proline-rich protein 12 OS=Homo sapiens GN=PRR12 PE=1 SV=2[more]
BLAST of ClCG05G010960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7R0_CUCSA5.7e-5670.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346900 PE=4 SV=1[more]
A0A068TX13_COFCA8.9e-1747.06Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032833001 PE=4 SV=1[more]
A0A139A4D5_GONPR7.1e-0645.31Uncharacterized protein OS=Gonapodya prolifera JEL478 GN=M427DRAFT_72798 PE=4 SV... [more]
A0A139A4D5_GONPR9.0e-0147.83Uncharacterized protein OS=Gonapodya prolifera JEL478 GN=M427DRAFT_72798 PE=4 SV... [more]
A0A0R1EGJ2_DROYA4.0e-0147.73Uncharacterized protein OS=Drosophila yakuba GN=Dyak\GE16158 PE=4 SV=1[more]
BLAST of ClCG05G010960 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G23040.12.4e-1342.05 hydroxyproline-rich glycoprotein family protein[more]
AT3G03350.22.7e-1243.66 NAD(P)-binding Rossmann-fold superfamily protein[more]
AT1G70990.11.0e-1138.83 proline-rich family protein[more]
AT1G02405.17.2e-1036.27 proline-rich family protein[more]
AT4G08370.18.8e-0832.14 Proline-rich extensin-like family protein[more]
BLAST of ClCG05G010960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680858|ref|XP_011651408.1|8.2e-5670.67PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis sativus][more]
gi|590652126|ref|XP_007033069.1|3.1e-2345.52Uncharacterized protein TCM_019232 [Theobroma cacao][more]
gi|255584475|ref|XP_002532967.1|4.5e-2252.78PREDICTED: formin-like protein 3 [Ricinus communis][more]
gi|566211035|ref|XP_006372591.1|5.9e-2244.54hypothetical protein POPTR_0017s03030g [Populus trichocarpa][more]
gi|697159392|ref|XP_009588454.1|3.3e-2043.41PREDICTED: leucine-rich repeat extensin-like protein 1 [Nicotiana tomentosiformi... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G010960.1ClCG05G010960.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35094FAMILY NOT NAMEDcoord: 21..104
score: 1.8
NoneNo IPR availablePANTHERPTHR35094:SF2SUBFAMILY NOT NAMEDcoord: 21..104
score: 1.8