CSPI03G21850 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCAAATGGACCAAAATACCCTTCTGTTCAAAGTATTCCCATGCACCTAACTCAACCAAAATAACAAAACCTACACTCACCTTCGCATTAACTCTCTCTCTCTCTCTCTCTCTCCACAAACTCAATCCTCATCGATTTTAGAGCTTTTTCTTTACATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTTCTTTTCTTTCCTCTCCCACCTCCTTCTTCTCGCCAACTCCCAAACCTCCTCCCCGATATTGGTAGATCCTCAAAATTCGGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGCCACCACCGCCGCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTTGTACTCCAACGGTGTCCTCTCGACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTTCCCGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGATTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGAAGGATGAATAGCCATATAAAGCAAGTTAATGTGTTGAATTTGGTCTAGTTACTAAAAGAAATATATTCACTCTTAGTTCATCATAAAGTATAAGTATATATATATATATATATATTATGATCTTAATTATTAGATGTCTATTTATTTACCTTTTATTTCAACAAAATTTATTTATATTTTCTTTCAATATAATTTTGGGGTTATATA ATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTTCTTTTCTTTCCTCTCCCACCTCCTTCTTCTCGCCAACTCCCAAACCTCCTCCCCGATATTGGTAGATCCTCAAAATTCGGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGCCACCACCGCCGCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTTGTACTCCAACGGTGTCCTCTCGACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTTCCCGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGATTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGA ATGAAAATGGCGCCTTCCGCCGCCATTTTACTCTTCTTTTCTTTCCTCTCCCACCTCCTTCTTCTCGCCAACTCCCAAACCTCCTCCCCGATATTGGTAGATCCTCAAAATTCGGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGCCACCACCGCCGCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTTGTACTCCAACGGTGTCCTCTCGACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTTCCCGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGATTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGA
BLAST of CSPI03G21850 vs. TrEMBL
Match: A0A0A0L7R0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346900 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 4.3e-76 Identity = 148/152 (97.37%), Postives = 148/152 (97.37%), Query Frame = 1
BLAST of CSPI03G21850 vs. TrEMBL
Match: A0A061EG52_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_019232 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 7.7e-17 Identity = 62/140 (44.29%), Postives = 77/140 (55.00%), Query Frame = 1
BLAST of CSPI03G21850 vs. TrEMBL
Match: U5FGW6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s03030g PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 8.6e-16 Identity = 67/151 (44.37%), Postives = 83/151 (54.97%), Query Frame = 1
BLAST of CSPI03G21850 vs. TrEMBL
Match: B9T3Z8_RICCO (Nutrient reservoir, putative OS=Ricinus communis GN=RCOM_0336770 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.3e-15 Identity = 62/140 (44.29%), Postives = 74/140 (52.86%), Query Frame = 1
BLAST of CSPI03G21850 vs. TrEMBL
Match: A0A0D2TXY8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G058400 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 8.0e-14 Identity = 57/148 (38.51%), Postives = 76/148 (51.35%), Query Frame = 1
BLAST of CSPI03G21850 vs. TAIR10
Match: AT3G03350.2 (AT3G03350.2 NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 59.3 bits (142), Expect = 2.4e-09 Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 1
BLAST of CSPI03G21850 vs. TAIR10
Match: AT1G23040.1 (AT1G23040.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-07 Identity = 40/93 (43.01%), Postives = 52/93 (55.91%), Query Frame = 1
BLAST of CSPI03G21850 vs. NCBI nr
Match: gi|778680858|ref|XP_011651408.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis sativus]) HSP 1 Score: 292.0 bits (746), Expect = 6.2e-76 Identity = 148/152 (97.37%), Postives = 148/152 (97.37%), Query Frame = 1
BLAST of CSPI03G21850 vs. NCBI nr
Match: gi|731417884|ref|XP_010660469.1| (PREDICTED: WAS/WASL-interacting protein family member 3-like [Vitis vinifera]) HSP 1 Score: 95.5 bits (236), Expect = 8.5e-17 Identity = 71/151 (47.02%), Postives = 85/151 (56.29%), Query Frame = 1
BLAST of CSPI03G21850 vs. NCBI nr
Match: gi|590652126|ref|XP_007033069.1| (Uncharacterized protein TCM_019232 [Theobroma cacao]) HSP 1 Score: 95.1 bits (235), Expect = 1.1e-16 Identity = 62/140 (44.29%), Postives = 77/140 (55.00%), Query Frame = 1
BLAST of CSPI03G21850 vs. NCBI nr
Match: gi|566211035|ref|XP_006372591.1| (hypothetical protein POPTR_0017s03030g [Populus trichocarpa]) HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15 Identity = 67/151 (44.37%), Postives = 83/151 (54.97%), Query Frame = 1
BLAST of CSPI03G21850 vs. NCBI nr
Match: gi|697159392|ref|XP_009588454.1| (PREDICTED: leucine-rich repeat extensin-like protein 1 [Nicotiana tomentosiformis]) HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15 Identity = 62/148 (41.89%), Postives = 79/148 (53.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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