Cucsa.012670 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.012670
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Nutrient reservoir, putative
Location	scaffold00164 : 352761 .. 353116 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCTCAAAATCCGGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGCCACCACCGCCGCCTCCGCCTCCTCCTCCTCCTTCTCCTTGTGCTCCAACGGTGTCCTCTCGACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTTCCCGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGATTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGA

mRNA sequence

ATCCTCAAAATCCGGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGCCACCACCGCCGcctccgcctcctcctcctccttctcctTGTGCTCCAACGGTGTCCTCTCGACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTTCCCGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGATTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGA

Coding sequence (CDS)

ATCCTCAAAATCCGGACGCTGAGATCAAATGTGGATCATGCCCTTGTTCCAATCCATGTATTCAACAACTATCGCCACCACCGCCGCCTCCGCCTCCTCCTCCTCCTTCTCCTTGTGCTCCAACGGTGTCCTCTCGACCACCACCTCCTAGGTTTATTTATACTACGTCATCACCTGCACCACCACCTCCAAGGTTTACTTATACGACGGGTGTTCCCGGTAATTTGTACGAGATTGATGCGAATAATAGTTGGTATTACTTCTCTGGCACGAGGAGGACGCGGCCGGGCATGGCGGCAGTTGTGGTGGCGATTGGCTGTGGAGCTTTGCATCTAATGGGGTTTAGTAAGTGGTGA

Protein sequence

PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW*

Homology

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BLAST of Cucsa.012670 vs. Swiss-Prot
Match: LRX6_ARATH (Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana GN=LRX6 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10
Identity = 32/70 (45.71%), Postives = 37/70 (52.86%), Query Frame = 1


Query: 8   IKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPP-PPRFT 67
           I C S  CS P      PPPPPPPPPPP P  P     PPPP ++Y +  P PP PP + 
Sbjct: 367 IDCASFGCSPP--SPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYV 426

Query: 68  YTTGVPGNLY 77
           Y    P  +Y
Sbjct: 427 YPPPPPPYVY 434

HSP 2 Score: 50.8 bits (120), Expect = 1.2e-05
Identity = 24/56 (42.86%), Postives = 27/56 (48.21%), Query Frame = 1


Query: 25  PPPPPPP--------PPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVP 73
           PPPPPPP        PPPP P  P     PPPP ++Y    P PP P + Y    P
Sbjct: 398 PPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVY----PPPPSPPYVYPPPPP 449

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BLAST of Cucsa.012670 vs. Swiss-Prot
Match: LRX3_ARATH (Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana GN=LRX3 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.3e-08
Identity = 23/39 (58.97%), Postives = 26/39 (66.67%), Query Frame = 1


Query: 25  PPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPP 64
           PPPPPPPPPPP   +P   S PPPP  +Y+   P PPPP
Sbjct: 467 PPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPP 505

HSP 2 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 26/63 (41.27%), Postives = 31/63 (49.21%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAP 60
           P +P   +     P   P      PPPPPPPPPPP    P     PPPP  +Y+   P+P
Sbjct: 428 PPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSP 487

Query: 61  PPP 64
           PPP
Sbjct: 488 PPP 490

HSP 3 Score: 56.2 bits (134), Expect = 2.8e-07
Identity = 25/50 (50.00%), Postives = 29/50 (58.00%), Query Frame = 1


Query: 14  PCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPP 64
           P   P +    PPPPPPPPPPP   +P   S PPPP  +Y+   P PPPP
Sbjct: 457 PPPPPPVYSPPPPPPPPPPPPP-VYSPPPPSPPPPPPPVYSPPPPPPPPP 505

HSP 4 Score: 53.1 bits (126), Expect = 2.3e-06
Identity = 30/66 (45.45%), Postives = 35/66 (53.03%), Query Frame = 1


Query: 12  SCPCSNPCIQQLSPPPPPPPPPPP-SPCAPTVSSRPPPPRF-----IYTTSSP-----AP 67
           S P   P +    PPPPPPPPPP  SP  P V S PPPP       +Y T  P     +P
Sbjct: 486 SPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSP 545

HSP 5 Score: 52.0 bits (123), Expect = 5.2e-06
Identity = 31/80 (38.75%), Postives = 37/80 (46.25%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPP----SPCAPTVSSRPPPPRF----- 60
           P  P   +     P   P    +  PPPPPPPPPP    SP  P V S PPPP       
Sbjct: 472 PPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTP 531

Query: 61  IYTTSSP-----APPPPRFT 67
           +Y T  P     +PPPP+F+
Sbjct: 532 VYCTRPPPPPPHSPPPPQFS 551

HSP 6 Score: 43.1 bits (100), Expect = 2.4e-03
Identity = 24/60 (40.00%), Postives = 28/60 (46.67%), Query Frame = 1


Query: 19  CIQQLSPPP--PPPPPPPPSPCAPTVSSRPPPPRFIYTTSSP----APPPPRFTYTTGVP 73
           C +   PPP  PPPP   P P  P   S PPPP       SP    +PPPP + Y +  P
Sbjct: 534 CTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPP 593

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BLAST of Cucsa.012670 vs. Swiss-Prot
Match: LECT_SOLTU (Chitin-binding lectin 1 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 7.3e-08
Identity = 27/55 (49.09%), Postives = 31/55 (56.36%), Query Frame = 1


Query: 10  CGSCPCSNPC-IQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPP 64
           C S  C + C +    PPPPPP PPPPSP +P   S PPPP        P+PPPP
Sbjct: 138 CASKNCQSQCKLPSPPPPPPPPSPPPPSPPSPPPPSPPPPP-------PPSPPPP 185

HSP 2 Score: 56.2 bits (134), Expect = 2.8e-07
Identity = 29/55 (52.73%), Postives = 31/55 (56.36%), Query Frame = 1


Query: 14  PCSNPCIQQLSPPPPPPP-PPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTY 68
           P S P     SPPPPPPP PPPPSP  P+ S  PPP       +SP PPPP   Y
Sbjct: 163 PPSPPSPPPPSPPPPPPPSPPPPSPPPPSPSPPPPP-------ASPPPPPPALPY 210

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BLAST of Cucsa.012670 vs. Swiss-Prot
Match: FH3_ORYSJ (Formin-like protein 3 OS=Oryza sativa subsp. japonica GN=FH3 PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-07
Identity = 26/55 (47.27%), Postives = 30/55 (54.55%), Query Frame = 1


Query: 17  NPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPP--------PRFIYTTSSPAPPPP 64
           +P     +PPPPPPPPPPPS   P  S  PPP        P+  Y +S P PPPP
Sbjct: 536 SPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPP 590

HSP 2 Score: 55.8 bits (133), Expect = 3.6e-07
Identity = 30/79 (37.97%), Postives = 36/79 (45.57%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPP-------PRFIY 60
           P  P      G+ P  +P      PPPPPPPPPPP P +   SS+PPP       P  + 
Sbjct: 546 PPPPPPPPPSGNKPAFSP------PPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLV 605

Query: 61  TTSSPAPPPPRFTYTTGVP 73
            +  P PPPP       VP
Sbjct: 606 PSPPPPPPPPPILPNRSVP 618

HSP 3 Score: 53.5 bits (127), Expect = 1.8e-06
Identity = 25/50 (50.00%), Postives = 28/50 (56.00%), Query Frame = 1


Query: 14  PCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPP 64
           P SN    Q  PPPPPPPPP P+   P+    PPPP  +   S P PPPP
Sbjct: 576 PQSNYASSQ--PPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPP 623

HSP 4 Score: 45.4 bits (106), Expect = 4.9e-04
Identity = 22/38 (57.89%), Postives = 22/38 (57.89%), Query Frame = 1


Query: 26  PPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPP 64
           PPPPPPPPPPS     V   PPPP        PAPPPP
Sbjct: 634 PPPPPPPPPPSLPNRLV---PPPPAPGIGNKFPAPPPP 668

HSP 5 Score: 45.4 bits (106), Expect = 4.9e-04
Identity = 21/43 (48.84%), Postives = 23/43 (53.49%), Query Frame = 1


Query: 24  SPPPPPPPPP---PPSPCAPTVSSRPPPPRFIYTTSSPAPPPP 64
           +PPPPPPPPP      P AP     PP P      + PAPPPP
Sbjct: 711 APPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPP 753

HSP 6 Score: 43.5 bits (101), Expect = 1.9e-03
Identity = 23/63 (36.51%), Postives = 27/63 (42.86%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAP 60
           P  P+  +     P   P I      PPPPPPPPP P    +   PPPP      +   P
Sbjct: 592 PPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVP 651

Query: 61  PPP 64
           PPP
Sbjct: 652 PPP 654

HSP 7 Score: 33.1 bits (74), Expect = 2.5e+00
Identity = 24/68 (35.29%), Postives = 25/68 (36.76%), Query Frame = 1


Query: 4   PDAEIKCGSCPCSNPCIQQLSPPPPPPPP-----PPPSPCA---PTVSSRPPPPRFIYTT 63
           P     CGS    +    QL P      P     P PSP A   P     PPPP      
Sbjct: 501 PTTPPPCGSLSILSTDENQLPPEVQHESPSDRKLPSPSPTAAAPPPPPPPPPPPSGNKPA 560

[Close]

BLAST of Cucsa.012670 vs. Swiss-Prot
Match: VP61_NPVAC (61 kDa protein OS=Autographa californica nuclear polyhedrosis virus GN=P61 PE=3 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-07
Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = 1


Query: 24  SPPPPPPPPPPPSPCAP----TVSSRPPPPRFIYTTSSPAPPP 63
           SPPPPPPPPPPP+P AP     +SS PPPP  +   S   PPP
Sbjct: 277 SPPPPPPPPPPPAPPAPPPMVDLSSAPPPPPLVDLPSEMLPPP 319

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BLAST of Cucsa.012670 vs. TrEMBL
Match: A0A0A0L7R0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346900 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 9.1e-66
Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPP-PPPPPPPSPCAPTVSSRPPPPRFIYTTSSPA 60
           PQNPDAEIKCGSCPCSNPCIQQLSPPPP PPPPPPPSPC PTVSSRPPPPRFIYTTSSPA
Sbjct: 35  PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPA 94

Query: 61  PPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW 118
           PPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAV VAIGCGALHLMGFSKW
Sbjct: 95  PPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVAVAIGCGALHLMGFSKW 152

[Close]

BLAST of Cucsa.012670 vs. TrEMBL
Match: U5FGW6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s03030g PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.0e-24
Identity = 60/116 (51.72%), Postives = 69/116 (59.48%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSP---CAPTVSSRPPPPRFIYTTSS 60
           PQ PDA IKCGSCPC NPC Q   PPPPPPPPPPP P   C P     PPPP   Y  S 
Sbjct: 36  PQEPDAGIKCGSCPCVNPCGQLPPPPPPPPPPPPPPPTPYCTPLAPPPPPPPPTPY-CSP 95

Query: 61  PAPPPPRFTYTTG-VPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLM 113
            APPPPRF Y T  VPG++YE D  N W  + G R+    +  +++ IG G   L+
Sbjct: 96  LAPPPPRFYYVTSTVPGSVYETDPYNRWGLYDGARQN--AVTWLLLLIGLGVTELL 148

[Close]

BLAST of Cucsa.012670 vs. TrEMBL
Match: A0A061EG52_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_019232 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.6e-24
Identity = 58/113 (51.33%), Postives = 68/113 (60.18%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSP-A 60
           PQ P  EIKCG+CPC NPC QQ  PPPPPPPP P           PPPPRF Y    P  
Sbjct: 45  PQAPTTEIKCGTCPCVNPCGQQSLPPPPPPPPSP-----------PPPPRFTYCNPVPMT 104

Query: 61  PPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLM 113
           PPPPRF Y TGVPG LY  DA++ W +FS   R   G+  ++++ G G L L+
Sbjct: 105 PPPPRFYYVTGVPGQLYTADADDRWTFFSSAGRDDIGI--LLLSFGFGLLGLL 144

[Close]

BLAST of Cucsa.012670 vs. TrEMBL
Match: B9T3Z8_RICCO (Nutrient reservoir, putative OS=Ricinus communis GN=RCOM_0336770 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.1e-21
Identity = 59/114 (51.75%), Postives = 66/114 (57.89%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAP 60
           PQ PDA IKCGSCPC NPC Q      PPPPPPPP          PPPP+ +Y T   AP
Sbjct: 35  PQEPDAGIKCGSCPCVNPCAQL-----PPPPPPPP----------PPPPKTVYCTPL-AP 94

Query: 61  PPPRFTYTTGVP--GNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLM 113
           PPPRF Y TGVP  GNLY  D   +W Y+S    T   ++  + A G G LHLM
Sbjct: 95  PPPRFIYVTGVPGNGNLYVTDPYENWDYYSDA--THNVVSWFLAAFGFGVLHLM 130

[Close]

BLAST of Cucsa.012670 vs. TrEMBL
Match: B9H394_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s08700g PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.8e-20
Identity = 52/113 (46.02%), Postives = 66/113 (58.41%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSP-CAPTVSSRPPPPRFIYTTSSPA 60
           P+  DA IKCGSCPC NPC Q   PPPPPPP  P +P C P     PPPP         A
Sbjct: 45  PRELDAGIKCGSCPCVNPCAQLAPPPPPPPPSAPQTPYCTPLA---PPPPL--------A 104

Query: 61  PPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLM 113
           PPPPRF Y T VPG+L E D  + W ++SG R+    +  +++ +G G + L+
Sbjct: 105 PPPPRFIYVTSVPGSLSETDPYDHWKFYSGARQN--PVRWLLLLVGLGVIELL 144

[Close]

BLAST of Cucsa.012670 vs. TAIR10
Match: AT1G23040.1 (AT1G23040.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 79.0 bits (193), Expect = 2.2e-15
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 1


Query: 15  CSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVPGN 74
           CS  CIQ   PP PPPP PPP  C P  +  PPPP+ + ++  P PPP  F Y TG PGN
Sbjct: 51  CSPSCIQNPPPPSPPPPSPPPPACPPPPALPPPPPKKV-SSYCPPPPPANFLYITGPPGN 110

Query: 75  LYEID 80
           LY +D
Sbjct: 111 LYPVD 114

[Close]

BLAST of Cucsa.012670 vs. TAIR10
Match: AT3G22800.1 (AT3G22800.1 Leucine-rich repeat (LRR) family protein)

HSP 1 Score: 67.4 bits (163), Expect = 6.8e-12
Identity = 32/70 (45.71%), Postives = 37/70 (52.86%), Query Frame = 1


Query: 8   IKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPP-PPRFT 67
           I C S  CS P      PPPPPPPPPPP P  P     PPPP ++Y +  P PP PP + 
Sbjct: 367 IDCASFGCSPP--SPPPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYV 426

Query: 68  YTTGVPGNLY 77
           Y    P  +Y
Sbjct: 427 YPPPPPPYVY 434

HSP 2 Score: 50.8 bits (120), Expect = 6.5e-07
Identity = 24/56 (42.86%), Postives = 27/56 (48.21%), Query Frame = 1


Query: 25  PPPPPPP--------PPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTGVP 73
           PPPPPPP        PPPP P  P     PPPP ++Y    P PP P + Y    P
Sbjct: 398 PPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVY----PPPPSPPYVYPPPPP 449

[Close]

BLAST of Cucsa.012670 vs. TAIR10
Match: AT1G70990.1 (AT1G70990.1 proline-rich family protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.5e-11
Identity = 34/73 (46.58%), Postives = 38/73 (52.05%), Query Frame = 1


Query: 8   IKCGSCPCSNPCIQQLSPP-PPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFT 67
           IKC       PC+Q + PP PPPP PPPPS   P     P PP+  Y      PPP  + 
Sbjct: 82  IKC------TPCLQNIPPPSPPPPSPPPPSQACPPPPLPPSPPKKSYC----PPPPSTYI 141

Query: 68  YTTGVPGNLYEID 80
           Y TG PG LY ID
Sbjct: 142 YMTGPPGELYPID 144

[Close]

BLAST of Cucsa.012670 vs. TAIR10
Match: AT3G03350.2 (AT3G03350.2 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 3.4e-11
Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 1


Query: 41  TVSSRPPPPRFIYTT-SSPAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAA 100
           T   RPPPPR  Y + SS +PPPP++ Y TGVPG LY  + ++ W Y S   R       
Sbjct: 25  TTPLRPPPPRKTYCSKSSSSPPPPKYMYVTGVPGELYRTEPDDQWGYNSSVNRNLVKCLL 84

Query: 101 VVVAIGCGALH 111
           V+V +G G ++
Sbjct: 85  VIVIVGFGVIN 95

[Close]

BLAST of Cucsa.012670 vs. TAIR10
Match: AT1G02405.1 (AT1G02405.1 proline-rich family protein)

HSP 1 Score: 61.2 bits (147), Expect = 4.8e-10
Identity = 32/69 (46.38%), Postives = 37/69 (53.62%), Query Frame = 1


Query: 18  PCIQQLSPPPPPPP-------PPPPSPCAPTVSSRPPPPRFIYTTSSPAPPPPRFTYTTG 77
           PC+Q   PPPP PP       PPPPSP  P  SS PP P        P PPPP + +T  
Sbjct: 43  PCLQNQPPPPPSPPPPSCTPSPPPPSPPPPKKSSCPPSP----LPPPPPPPPPNYVFTY- 102

Query: 78  VPGNLYEID 80
            PG+LY I+
Sbjct: 103 PPGDLYPIE 106

[Close]

BLAST of Cucsa.012670 vs. NCBI nr
Match: gi|778680858|ref|XP_011651408.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 1.3e-65
Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPP-PPPPPPPSPCAPTVSSRPPPPRFIYTTSSPA 60
           PQNPDAEIKCGSCPCSNPCIQQLSPPPP PPPPPPPSPC PTVSSRPPPPRFIYTTSSPA
Sbjct: 35  PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPPSPCTPTVSSRPPPPRFIYTTSSPA 94

Query: 61  PPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLMGFSKW 118
           PPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAV VAIGCGALHLMGFSKW
Sbjct: 95  PPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVAVAIGCGALHLMGFSKW 152

[Close]

BLAST of Cucsa.012670 vs. NCBI nr
Match: gi|731417884|ref|XP_010660469.1| (PREDICTED: WAS/WASL-interacting protein family member 3-like [Vitis vinifera])

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-24
Identity = 59/115 (51.30%), Postives = 69/115 (60.00%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTV---SSRPPPPRFIYTTSS 60
           PQ PD+ IKC +CPC NPC  Q SPPPPPPPPPPP P   T       PPPPRFIY T  
Sbjct: 46  PQVPDSSIKCMTCPCVNPCSDQHSPPPPPPPPPPPPPPPRTQDCGQQVPPPPRFIYITE- 105

Query: 61  PAPPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLM 113
             PPPPRFTY    PGNLY  + +N  +Y +  R    G    +V +GCG L ++
Sbjct: 106 --PPPPRFTYIINEPGNLYATNPSNLGFYSASGRNVVIGF---MVLVGCGILDVL 154

[Close]

BLAST of Cucsa.012670 vs. NCBI nr
Match: gi|566211035|ref|XP_006372591.1| (hypothetical protein POPTR_0017s03030g [Populus trichocarpa])

HSP 1 Score: 119.4 bits (298), Expect = 4.2e-24
Identity = 60/116 (51.72%), Postives = 69/116 (59.48%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSP---CAPTVSSRPPPPRFIYTTSS 60
           PQ PDA IKCGSCPC NPC Q   PPPPPPPPPPP P   C P     PPPP   Y  S 
Sbjct: 36  PQEPDAGIKCGSCPCVNPCGQLPPPPPPPPPPPPPPPTPYCTPLAPPPPPPPPTPY-CSP 95

Query: 61  PAPPPPRFTYTTG-VPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLM 113
            APPPPRF Y T  VPG++YE D  N W  + G R+    +  +++ IG G   L+
Sbjct: 96  LAPPPPRFYYVTSTVPGSVYETDPYNRWGLYDGARQN--AVTWLLLLIGLGVTELL 148

[Close]

BLAST of Cucsa.012670 vs. NCBI nr
Match: gi|697159392|ref|XP_009588454.1| (PREDICTED: leucine-rich repeat extensin-like protein 1 [Nicotiana tomentosiformis])

HSP 1 Score: 118.6 bits (296), Expect = 7.2e-24
Identity = 59/126 (46.83%), Postives = 69/126 (54.76%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPP----PPPPPPPPPSP--CAPTVSSRPPPPRFIYT 60
           P  PD  IKCG CPC  PC QQL+PP    PPPPPPP  S   C P +   PP PRFIY 
Sbjct: 30  PLMPDPSIKCGECPCGKPCNQQLTPPISSSPPPPPPPKASNTYCPPVIQQNPPSPRFIYF 89

Query: 61  TSSPA--------PPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGC 113
           T+ PA        PPPPRF Y T  PGNLY  D  N   Y     R    + ++++ +GC
Sbjct: 90  TAPPAIQQSKPSSPPPPRFIYFTAPPGNLYSTDPFNLQIYSGALTRNPLCLNSLLLLVGC 149

[Close]

BLAST of Cucsa.012670 vs. NCBI nr
Match: gi|590652126|ref|XP_007033069.1| (Uncharacterized protein TCM_019232 [Theobroma cacao])

HSP 1 Score: 118.2 bits (295), Expect = 9.5e-24
Identity = 58/113 (51.33%), Postives = 68/113 (60.18%), Query Frame = 1


Query: 1   PQNPDAEIKCGSCPCSNPCIQQLSPPPPPPPPPPPSPCAPTVSSRPPPPRFIYTTSSP-A 60
           PQ P  EIKCG+CPC NPC QQ  PPPPPPPP P           PPPPRF Y    P  
Sbjct: 45  PQAPTTEIKCGTCPCVNPCGQQSLPPPPPPPPSP-----------PPPPRFTYCNPVPMT 104

Query: 61  PPPPRFTYTTGVPGNLYEIDANNSWYYFSGTRRTRPGMAAVVVAIGCGALHLM 113
           PPPPRF Y TGVPG LY  DA++ W +FS   R   G+  ++++ G G L L+
Sbjct: 105 PPPPRFYYVTGVPGQLYTADADDRWTFFSSAGRDDIGI--LLLSFGFGLLGLL 144

The following BLAST results are available for this feature:

BLAST of Cucsa.012670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LRX6_ARATH	1.2e-10	45.71	Leucine-rich repeat extensin-like protein 6 OS=Arabidopsis thaliana GN=LRX6 PE=2...	[more]
LRX3_ARATH	3.3e-08	58.97	Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana GN=LRX3 PE=1...	[more]
LECT_SOLTU	7.3e-08	49.09	Chitin-binding lectin 1 OS=Solanum tuberosum PE=1 SV=2	[more]
FH3_ORYSJ	2.1e-07	47.27	Formin-like protein 3 OS=Oryza sativa subsp. japonica GN=FH3 PE=2 SV=2	[more]
VP61_NPVAC	2.1e-07	58.14	61 kDa protein OS=Autographa californica nuclear polyhedrosis virus GN=P61 PE=3 ...	[more]

BLAST of Cucsa.012670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7R0_CUCSA	9.1e-66	97.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346900 PE=4 SV=1	[more]
U5FGW6_POPTR	3.0e-24	51.72	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s03030g PE=4 SV=1	[more]
A0A061EG52_THECC	6.6e-24	51.33	Uncharacterized protein OS=Theobroma cacao GN=TCM_019232 PE=4 SV=1	[more]
B9T3Z8_RICCO	3.1e-21	51.75	Nutrient reservoir, putative OS=Ricinus communis GN=RCOM_0336770 PE=4 SV=1	[more]
B9H394_POPTR	5.8e-20	46.02	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s08700g PE=4 SV=1	[more]

BLAST of Cucsa.012670 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G23040.1	2.2e-15	52.31	hydroxyproline-rich glycoprotein family protein	[more]
AT3G22800.1	6.8e-12	45.71	Leucine-rich repeat (LRR) family protein	[more]
AT1G70990.1	1.5e-11	46.58	proline-rich family protein	[more]
AT3G03350.2	3.4e-11	42.25	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G02405.1	4.8e-10	46.38	proline-rich family protein	[more]

BLAST of Cucsa.012670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680858\|ref\|XP_011651408.1\|	1.3e-65	97.46	PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis sativus]	[more]
gi\|731417884\|ref\|XP_010660469.1\|	2.5e-24	51.30	PREDICTED: WAS/WASL-interacting protein family member 3-like [Vitis vinifera]	[more]
gi\|566211035\|ref\|XP_006372591.1\|	4.2e-24	51.72	hypothetical protein POPTR_0017s03030g [Populus trichocarpa]	[more]
gi\|697159392\|ref\|XP_009588454.1\|	7.2e-24	46.83	PREDICTED: leucine-rich repeat extensin-like protein 1 [Nicotiana tomentosiformi...	[more]
gi\|590652126\|ref\|XP_007033069.1\|	9.5e-24	51.33	Uncharacterized protein TCM_019232 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.012670.1	Cucsa.012670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35094	FAMILY NOT NAMED	coord: 1..116 score: 4.2
None	No IPR available	PANTHER	PTHR35094:SF2	SUBFAMILY NOT NAMED	coord: 1..116 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.012670	Cla013170	Watermelon (97103) v1	cgywmB367
Cucsa.012670	Csa3G346900	Cucumber (Chinese Long) v2	cgycuB290
Cucsa.012670	MELO3C020289	Melon (DHL92) v3.5.1	cgymeB343
Cucsa.012670	ClCG05G010960	Watermelon (Charleston Gray)	cgywcgB345
Cucsa.012670	CSPI03G21850	Wild cucumber (PI 183967)	cgycpiB299
Cucsa.012670	CmaCh14G008520	Cucurbita maxima (Rimu)	cgycmaB0548
Cucsa.012670	CmoCh14G008660	Cucurbita moschata (Rifu)	cgycmoB0549
Cucsa.012670	Lsi05G003050	Bottle gourd (USVL1VR-Ls)	cgylsiB322
Cucsa.012670	Cp4.1LG03g05700	Cucurbita pepo (Zucchini)	cgycpeB0532
Cucsa.012670	MELO3C020289.2	Melon (DHL92) v3.6.1	cgymedB338
Cucsa.012670	CsaV3_3G021620	Cucumber (Chinese Long) v3	cgycucB303
Cucsa.012670	Cla97C05G093250	Watermelon (97103) v2	cgywmbB351
Cucsa.012670	Carg07444	Silver-seed gourd	carcgyB0859

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.012670	Wax gourd	cgywgoB393
Cucsa.012670	Cucurbita maxima (Rimu)	cgycmaB0551
Cucsa.012670	Cucurbita moschata (Rifu)	cgycmoB0552
Cucsa.012670	Cucurbita pepo (Zucchini)	cgycpeB0531