CSPI03G19080 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G19080
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Ferredoxin-2
Location	Chr3 : 14832993 .. 14833934 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGAGCGTGTGGAAGCCATGGCCTCTCATTCCCATGGTCCCATGATTGTTGATAAAAGGACAGAGTATTAGCTCGTAGCCTTTCATTTCATTTCTTATCTACAGGTGTGGGCTCCTCTTCTACTACAAGCTGAGTAAGGCATACGAATAAGATCCAGAAGTCAGTGGCCATTCATCTTGGTAGAGCAGCAAAATGACCAGTTCACCAGCACTTTCCAGTGTGACATTGAACACCTCGTTTCTCCAGAAGCAGCCAGCAGCAAGGATAAGGTTGGTGTTGAACTTTGGCCAAGATTTGTTTGGGCTGAAGGGTGGCAGCAGCCGAGGTGGGCGAGTGATTGCAATGGCAGAGTACAACGTGAAGTTGATCACACCAACAGGAGAGACGGAGTTCAAGTGCCCGGATGACGAATACATTCTTGATCGAGCTGAGCAAATGGGATTTGATCTTCCATATTCATGTAGAGCAGGGTCTTGCTCTTCTTGTGCAGGGAAAGTAGTATCAGGGAAGGTGGATCAGTCAGATGGGAGCTACCTTGAGGATGATCAGATGGATGAAGGTTGGGTTTTAACTTGTGTTGCTTACCCGCAGTCAGATGTTGTCATTGAGACACACAAGGAGGAATATCTATTTAGTTAGTTAGTTAAGTCTGCTTCAAGATCTAGTTATTTATCTCCATGAAATGATTCTGGCTTGCCTTCAGGTCCTTAATCAGATGTCTCATGGAGTTTTTTGATCACTTTTCTTAGTTTTACACCAACATTCTAAAACCAATTTAGGTTAGGATTTAAATTGATATATTTGTAAAAATTTTAGATTTAAATTGGTACAATTATTTAGTTTAGGGTTTAGATTGACATAACTTCAAAGTTCAGGGTTTAAATTGATGCACATTATCTTATACGACTCCAAAAATTTAGAGATATAAATTGATATTTGTT

mRNA sequence

ATGACCAGTTCACCAGCACTTTCCAGTGTGACATTGAACACCTCGTTTCTCCAGAAGCAGCCAGCAGCAAGGATAAGGTTGGTGTTGAACTTTGGCCAAGATTTGTTTGGGCTGAAGGGTGGCAGCAGCCGAGGTGGGCGAGTGATTGCAATGGCAGAGTACAACGTGAAGTTGATCACACCAACAGGAGAGACGGAGTTCAAGTGCCCGGATGACGAATACATTCTTGATCGAGCTGAGCAAATGGGATTTGATCTTCCATATTCATGTAGAGCAGGGTCTTGCTCTTCTTGTGCAGGGAAAGTAGTATCAGGGAAGGTGGATCAGTCAGATGGGAGCTACCTTGAGGATGATCAGATGGATGAAGGTTGGGTTTTAACTTGTGTTGCTTACCCGCAGTCAGATGTTGTCATTGAGACACACAAGGAGGAATATCTATTTAGTTAG

Coding sequence (CDS)

ATGACCAGTTCACCAGCACTTTCCAGTGTGACATTGAACACCTCGTTTCTCCAGAAGCAGCCAGCAGCAAGGATAAGGTTGGTGTTGAACTTTGGCCAAGATTTGTTTGGGCTGAAGGGTGGCAGCAGCCGAGGTGGGCGAGTGATTGCAATGGCAGAGTACAACGTGAAGTTGATCACACCAACAGGAGAGACGGAGTTCAAGTGCCCGGATGACGAATACATTCTTGATCGAGCTGAGCAAATGGGATTTGATCTTCCATATTCATGTAGAGCAGGGTCTTGCTCTTCTTGTGCAGGGAAAGTAGTATCAGGGAAGGTGGATCAGTCAGATGGGAGCTACCTTGAGGATGATCAGATGGATGAAGGTTGGGTTTTAACTTGTGTTGCTTACCCGCAGTCAGATGTTGTCATTGAGACACACAAGGAGGAATATCTATTTAGTTAG

Homology

[Close]

BLAST of CSPI03G19080 vs. Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.6e-47
Identity = 92/144 (63.89%), Postives = 107/144 (74.31%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQPAARIRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLITPT 62
           ++ ALS  T++T+F  K P     L  N G+ LFGLK  +SRG RV AMA Y V L+TP 
Sbjct: 4   TTAALSGATMSTAFAPKTPPMTAALPTNVGRALFGLKSSASRG-RVTAMAAYKVTLVTPE 63

Query: 63  GETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDE 122
           G+ E +CPDD YILD AE+ G DLPYSCRAGSCSSCAGKV SG V+Q DGS+L+DDQ+ E
Sbjct: 64  GKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKE 123

Query: 123 GWVLTCVAYPQSDVVIETHKEEYL 147
           GWVLTCVAYP  DV IETHKEE L
Sbjct: 124 GWVLTCVAYPTGDVTIETHKEEEL 146

[Close]

BLAST of CSPI03G19080 vs. Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.5e-47
Identity = 94/144 (65.28%), Postives = 111/144 (77.08%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQ--PAARIRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 62
           +S ALSS  ++TSFL++Q  P +   L     Q LFGLK  ++RGGRV AMA Y VK IT
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFIT 61

Query: 63  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 122
           P GE E +C +D Y+LD AE+ G DLPYSCRAGSCSSCAGKVVSG +DQSD S+L+D+QM
Sbjct: 62  PEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQM 121

Query: 123 DEGWVLTCVAYPQSDVVIETHKEE 145
            EG+VLTCVAYP SDVVIETHKEE
Sbjct: 122 SEGYVLTCVAYPTSDVVIETHKEE 145

[Close]

BLAST of CSPI03G19080 vs. Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 7.7e-47
Identity = 88/142 (61.97%), Postives = 112/142 (78.87%), Query Frame = 1


Query: 6   ALSSVTLNTSFLQKQPAAR-IRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLITPTGE 65
           ++S+  ++TSF+ ++PA   ++ + N G+ LFGLK  S+ GG+V  MA Y VKLITP G 
Sbjct: 3   SVSATMISTSFMPRKPAVTSLKPIPNVGEALFGLK--SANGGKVTCMASYKVKLITPDGP 62

Query: 66  TEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDEGW 125
            EF CPD+ YILD+AE+ G DLPYSCRAGSCSSCAGK+  G VDQ+DG++L+DDQ++EGW
Sbjct: 63  IEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGW 122

Query: 126 VLTCVAYPQSDVVIETHKEEYL 147
           VLTCVAYPQSDV IETHKE  L
Sbjct: 123 VLTCVAYPQSDVTIETHKEAEL 142

[Close]

BLAST of CSPI03G19080 vs. Swiss-Prot
Match: FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.9e-46
Identity = 93/144 (64.58%), Postives = 111/144 (77.08%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQPAA-RIRLVLNFG-QDLFGLKGGSSRGGRVIAMAEYNVKLIT 62
           +S ALSS  + TSF+++ PA   +R + +   Q LFGLK G++RGGRV AMA Y VK IT
Sbjct: 2   ASTALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFIT 61

Query: 63  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 122
           P GE E +C DD Y+LD AE+ G DLPYSCRAGSCSSCAGKVVSG VDQSD S+L+D+Q+
Sbjct: 62  PEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 121

Query: 123 DEGWVLTCVAYPQSDVVIETHKEE 145
            EG+VLTC AYP SDV IETHKEE
Sbjct: 122 GEGFVLTCAAYPTSDVTIETHKEE 145

[Close]

BLAST of CSPI03G19080 vs. Swiss-Prot
Match: FER1_SOLLC (Ferredoxin-1, chloroplastic OS=Solanum lycopersicum GN=SEND33 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.9e-45
Identity = 88/142 (61.97%), Postives = 109/142 (76.76%), Query Frame = 1


Query: 6   ALSSVTLNTSFLQKQPAAR-IRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLITPTGE 65
           ++S   ++TSFL ++PA   ++ + N G+ LFGLK G  R GR+  MA Y VKLITP G 
Sbjct: 3   SISGTMISTSFLPRKPAVTSLKAISNVGEALFGLKSG--RNGRITCMASYKVKLITPEGP 62

Query: 66  TEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDEGW 125
            EF+CPDD YILD+AE+ G DLPYSCRAGSCSSCAGKV +G VDQSDG++L++DQ   G+
Sbjct: 63  IEFECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGF 122

Query: 126 VLTCVAYPQSDVVIETHKEEYL 147
           VLTCVAYP+ DV IETHKEE L
Sbjct: 123 VLTCVAYPKGDVTIETHKEEEL 142

[Close]

BLAST of CSPI03G19080 vs. TrEMBL
Match: A0A0A0LAD3_CUCSA (Ferredoxin-2 OS=Cucumis sativus GN=Csa_3G222790 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.0e-77
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQPAARIRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 60
           MTSSPALSSVTLNTSFLQKQP  RIRLVLNFGQDLF LKGGSSRGGRVIAMAEYNVKLIT
Sbjct: 1   MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120
           PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM
Sbjct: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120

Query: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 149
           DEGWVLTCVAYPQSDVVIETHKEEYLFS
Sbjct: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 148

[Close]

BLAST of CSPI03G19080 vs. TrEMBL
Match: F8SPG7_CAMSI (Chloroplast ferredoxin I OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 9.4e-52
Identity = 104/147 (70.75%), Postives = 120/147 (81.63%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQ-PAARIRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLI 60
           M  + +LSS  ++TSFLQ+Q P   +R + N GQ LFG+KGG  RGGRV AMA Y VKL+
Sbjct: 1   MAMAASLSSTMVSTSFLQRQQPVTSLRSLPNVGQALFGVKGG--RGGRVTAMAMYKVKLL 60

Query: 61  TPTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQ 120
           TP G  EF+CPDD YILD+AE++G DLPYSCRAGSCSSCAGK+  GKVDQSDGS+L+DDQ
Sbjct: 61  TPEGPQEFECPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKLTGGKVDQSDGSFLDDDQ 120

Query: 121 MDEGWVLTCVAYPQSDVVIETHKEEYL 147
           MD GWVLTCVAYPQSDVVIETHKEE L
Sbjct: 121 MDGGWVLTCVAYPQSDVVIETHKEEEL 145

[Close]

BLAST of CSPI03G19080 vs. TrEMBL
Match: F6HK77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00270 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 8.8e-50
Identity = 97/140 (69.29%), Postives = 113/140 (80.71%), Query Frame = 1


Query: 7   LSSVTLNTSFLQKQPAARIRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLITPTGETE 66
           LS   ++TSF+++QP   +R + N GQ LFGLK G    GRV AMA Y VKLITP G  E
Sbjct: 4   LSGAMVSTSFIRRQPVTSLRALPNVGQALFGLKAGR---GRVTAMAVYKVKLITPEGAKE 63

Query: 67  FKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDEGWVL 126
           F+CPDD Y+LD AE++G DLPYSCRAGSCSSCAG+VV G VDQSDGS+LED+QM+EGWVL
Sbjct: 64  FECPDDVYVLDHAEEIGIDLPYSCRAGSCSSCAGRVVEGTVDQSDGSFLEDEQMEEGWVL 123

Query: 127 TCVAYPQSDVVIETHKEEYL 147
           TCVAYPQSD+VIETHKEE L
Sbjct: 124 TCVAYPQSDLVIETHKEEEL 140

[Close]

BLAST of CSPI03G19080 vs. TrEMBL
Match: A0A067L2U1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04972 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 8.8e-50
Identity = 100/144 (69.44%), Postives = 116/144 (80.56%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQPAARIRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLITPT 62
           +S ALSS  ++TSF ++QP   +R + N GQ LFGLK  SSRGG+  AMA Y VKL+TP 
Sbjct: 2   ASTALSSAMVSTSFTRRQPVTSLRALPNVGQALFGLK--SSRGGKFKAMASYKVKLLTPE 61

Query: 63  GETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDE 122
           GE   +CPDD YILD AE+ G DLPYSCRAGSCSSCAGKVV G+VDQSDGS+L+D+QM+E
Sbjct: 62  GEKVIECPDDVYILDAAEEAGVDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQMEE 121

Query: 123 GWVLTCVAYPQSDVVIETHKEEYL 147
           GWVLTCVAYP SDVVIETHKEE L
Sbjct: 122 GWVLTCVAYPTSDVVIETHKEEDL 143

[Close]

BLAST of CSPI03G19080 vs. TrEMBL
Match: A0A0S3S1Q6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G006400 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.7e-49
Identity = 102/147 (69.39%), Postives = 116/147 (78.91%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQPAARIRLV-LNFGQDLFGLKGGSSRGGRVIAMAEYNVKLI 60
           M ++PAL    LNTSFL+KQP     L        +FG++GG  RGGRV AMA Y VKLI
Sbjct: 1   MATAPALCGSVLNTSFLRKQPVISTSLKSFPNANAMFGVEGG--RGGRVTAMAAYKVKLI 60

Query: 61  TPTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQ 120
           TP GE EF+CPDDEYILD AE +G DLPYSCRAGSCSSCAGKVV+GKVDQSDG+YL+DDQ
Sbjct: 61  TPEGEKEFECPDDEYILDVAENLGLDLPYSCRAGSCSSCAGKVVAGKVDQSDGNYLDDDQ 120

Query: 121 MDEGWVLTCVAYPQSDVVIETHKEEYL 147
           + EG+VLTCVAYP SD+VIETHKEE L
Sbjct: 121 IGEGFVLTCVAYPSSDLVIETHKEEDL 145

[Close]

BLAST of CSPI03G19080 vs. TAIR10
Match: AT1G10960.1 (AT1G10960.1 ferredoxin 1)

HSP 1 Score: 188.7 bits (478), Expect = 2.5e-48
Identity = 94/144 (65.28%), Postives = 111/144 (77.08%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQ--PAARIRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 62
           +S ALSS  ++TSFL++Q  P +   L     Q LFGLK  ++RGGRV AMA Y VK IT
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFIT 61

Query: 63  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 122
           P GE E +C +D Y+LD AE+ G DLPYSCRAGSCSSCAGKVVSG +DQSD S+L+D+QM
Sbjct: 62  PEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQM 121

Query: 123 DEGWVLTCVAYPQSDVVIETHKEE 145
            EG+VLTCVAYP SDVVIETHKEE
Sbjct: 122 SEGYVLTCVAYPTSDVVIETHKEE 145

[Close]

BLAST of CSPI03G19080 vs. TAIR10
Match: AT1G60950.1 (AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 186.0 bits (471), Expect = 1.6e-47
Identity = 93/144 (64.58%), Postives = 111/144 (77.08%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQPAA-RIRLVLNFG-QDLFGLKGGSSRGGRVIAMAEYNVKLIT 62
           +S ALSS  + TSF+++ PA   +R + +   Q LFGLK G++RGGRV AMA Y VK IT
Sbjct: 2   ASTALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFIT 61

Query: 63  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 122
           P GE E +C DD Y+LD AE+ G DLPYSCRAGSCSSCAGKVVSG VDQSD S+L+D+Q+
Sbjct: 62  PEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 121

Query: 123 DEGWVLTCVAYPQSDVVIETHKEE 145
            EG+VLTC AYP SDV IETHKEE
Sbjct: 122 GEGFVLTCAAYPTSDVTIETHKEE 145

[Close]

BLAST of CSPI03G19080 vs. TAIR10
Match: AT2G27510.1 (AT2G27510.1 ferredoxin 3)

HSP 1 Score: 149.8 bits (377), Expect = 1.3e-36
Identity = 72/113 (63.72%), Postives = 89/113 (78.76%), Query Frame = 1


Query: 36  FGLKGGSSRGGRVIAMAEYNVKLITPTG-ETEFKCPDDEYILDRAEQMGFDLPYSCRAGS 95
           FGLK  ++ GG  ++ A Y VKL+ P G E EF+  DD+YILD AE+ G DLPYSCRAG+
Sbjct: 44  FGLKCSANSGGATMS-AVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGA 103

Query: 96  CSSCAGKVVSGKVDQSDGSYLEDDQMDEGWVLTCVAYPQSDVVIETHKEEYLF 148
           CS+CAG++VSG VDQSDGS+LED  +++G+VLTCVAYPQSD VI THKE  LF
Sbjct: 104 CSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155

[Close]

BLAST of CSPI03G19080 vs. TAIR10
Match: AT5G10000.1 (AT5G10000.1 ferredoxin 4)

HSP 1 Score: 117.9 bits (294), Expect = 5.5e-27
Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1


Query: 36  FGLKGGSSRGGRVIAMAEYNVKLITPTGET-EFKCPDDEYILDRAEQMGFDLPYSCRAGS 95
           FGL       G+V A     VKLI+P GE  E +  +D  IL+ AE  G +LPYSCR+G+
Sbjct: 36  FGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGT 95

Query: 96  CSSCAGKVVSGKVDQSDGSYLEDDQMDEGWVLTCVAYPQSDVVIETHKEEYL 147
           C +C GK+VSGKVDQS GS+LE++Q+ +G++LTC+A P  D V+ THK+  L
Sbjct: 96  CGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDL 147

[Close]

BLAST of CSPI03G19080 vs. TAIR10
Match: AT4G14890.1 (AT4G14890.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.5e-16
Identity = 45/103 (43.69%), Postives = 58/103 (56.31%), Query Frame = 1


Query: 46  GRVIAMAEYNVKLITPTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSG 105
           GR+IA A Y V +      TE +   DE IL +A   G D+PY C  G C +C  K+V+G
Sbjct: 46  GRIIARA-YKVVVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTG 105

Query: 106 KVDQSDGSYLEDDQMDEGWVLTCVAYPQSDVVIETHKEEYLFS 149
            VDQS G  L DD ++ G+ L C +YP SD  I+   EE L S
Sbjct: 106 TVDQS-GGMLSDDVVERGYTLLCASYPTSDCHIKMIPEEELLS 146

[Close]

BLAST of CSPI03G19080 vs. NCBI nr
Match: gi|449457047|ref|XP_004146260.1| (PREDICTED: ferredoxin-like [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 1.4e-77
Identity = 145/148 (97.97%), Postives = 145/148 (97.97%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQPAARIRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 60
           MTSSPALSSVTLNTSFLQKQP  RIRLVLNFGQDLF LKGGSSRGGRVIAMAEYNVKLIT
Sbjct: 1   MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120
           PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM
Sbjct: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120

Query: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 149
           DEGWVLTCVAYPQSDVVIETHKEEYLFS
Sbjct: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 148

[Close]

BLAST of CSPI03G19080 vs. NCBI nr
Match: gi|659112076|ref|XP_008456053.1| (PREDICTED: ferredoxin-like [Cucumis melo])

HSP 1 Score: 279.3 bits (713), Expect = 4.0e-72
Identity = 134/148 (90.54%), Postives = 141/148 (95.27%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQPAARIRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 60
           M SSPALSS TLNTSFL+KQPA R+  VLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT
Sbjct: 1   MASSPALSSATLNTSFLRKQPATRLGSVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120
           P GETEFKC DD+YILDRAE+MGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYL++DQM
Sbjct: 61  PAGETEFKCQDDDYILDRAEEMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDEDQM 120

Query: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 149
           +EGWVLTCVAYPQSDVVIETHKEEYLFS
Sbjct: 121 NEGWVLTCVAYPQSDVVIETHKEEYLFS 148

[Close]

BLAST of CSPI03G19080 vs. NCBI nr
Match: gi|1009124224|ref|XP_015878951.1| (PREDICTED: ferredoxin [Ziziphus jujuba])

HSP 1 Score: 211.8 bits (538), Expect = 7.9e-52
Identity = 101/146 (69.18%), Postives = 119/146 (81.51%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQPAARIRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 60
           M ++ ALS   ++TSF+++QP   +R + N GQ LFGLK  SSRGGRV AMA Y VKL+T
Sbjct: 1   MATAAALSGTMVSTSFMRRQPVTSLRSLPNVGQALFGLK--SSRGGRVTAMASYKVKLVT 60

Query: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120
           P G  EF+CPDD YILD AE++G DLPYSCRAGSCSSCAGKVV G VDQSDGS+L+D+Q+
Sbjct: 61  PDGPQEFECPDDVYILDHAEEIGIDLPYSCRAGSCSSCAGKVVQGSVDQSDGSFLDDEQI 120

Query: 121 DEGWVLTCVAYPQSDVVIETHKEEYL 147
           + GWVLTCVAYPQSDVVIETHKEE L
Sbjct: 121 ESGWVLTCVAYPQSDVVIETHKEEEL 144

[Close]

BLAST of CSPI03G19080 vs. NCBI nr
Match: gi|338173755|gb|AEI83424.1| (chloroplast ferredoxin I [Camellia sinensis])

HSP 1 Score: 211.1 bits (536), Expect = 1.4e-51
Identity = 104/147 (70.75%), Postives = 120/147 (81.63%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQ-PAARIRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLI 60
           M  + +LSS  ++TSFLQ+Q P   +R + N GQ LFG+KGG  RGGRV AMA Y VKL+
Sbjct: 1   MAMAASLSSTMVSTSFLQRQQPVTSLRSLPNVGQALFGVKGG--RGGRVTAMAMYKVKLL 60

Query: 61  TPTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQ 120
           TP G  EF+CPDD YILD+AE++G DLPYSCRAGSCSSCAGK+  GKVDQSDGS+L+DDQ
Sbjct: 61  TPEGPQEFECPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKLTGGKVDQSDGSFLDDDQ 120

Query: 121 MDEGWVLTCVAYPQSDVVIETHKEEYL 147
           MD GWVLTCVAYPQSDVVIETHKEE L
Sbjct: 121 MDGGWVLTCVAYPQSDVVIETHKEEEL 145

[Close]

BLAST of CSPI03G19080 vs. NCBI nr
Match: gi|1012102262|ref|XP_015957693.1| (PREDICTED: ferredoxin [Arachis duranensis])

HSP 1 Score: 208.8 bits (530), Expect = 6.7e-51
Identity = 104/149 (69.80%), Postives = 122/149 (81.88%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQPAAR---IRLVLNFGQDLFGLKGGSSRGGRVIAMAEYNVK 60
           M ++PALS   ++TSFL++QP A    ++   N GQ LFG+KGG  RGGRV AMA Y VK
Sbjct: 1   MATTPALSGTMVSTSFLRRQPVATTTSLKAFPNVGQALFGVKGG--RGGRVTAMASYKVK 60

Query: 61  LITPTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLED 120
           LITP G  EF CPDD YILD+AE++G +LPYSCRAGSCSSCAGKVV+GKVDQSDGS+L+D
Sbjct: 61  LITPEGPQEFDCPDDVYILDQAEEVGVELPYSCRAGSCSSCAGKVVNGKVDQSDGSFLDD 120

Query: 121 DQMDEGWVLTCVAYPQSDVVIETHKEEYL 147
           DQ+D G+VLTCVAYPQSDVVIETHKEE L
Sbjct: 121 DQIDGGFVLTCVAYPQSDVVIETHKEEEL 147

The following BLAST results are available for this feature:

BLAST of CSPI03G19080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FER1_MESCR	2.6e-47	63.89	Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1	[more]
FER1_ARATH	4.5e-47	65.28	Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1	[more]
FER_CAPAN	7.7e-47	61.97	Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1	[more]
FER2_ARATH	2.9e-46	64.58	Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1	[more]
FER1_SOLLC	1.9e-45	61.97	Ferredoxin-1, chloroplastic OS=Solanum lycopersicum GN=SEND33 PE=2 SV=1	[more]

BLAST of CSPI03G19080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAD3_CUCSA	1.0e-77	97.97	Ferredoxin-2 OS=Cucumis sativus GN=Csa_3G222790 PE=4 SV=1	[more]
F8SPG7_CAMSI	9.4e-52	70.75	Chloroplast ferredoxin I OS=Camellia sinensis PE=2 SV=1	[more]
F6HK77_VITVI	8.8e-50	69.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00270 PE=4 SV=...	[more]
A0A067L2U1_JATCU	8.8e-50	69.44	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04972 PE=4 SV=1	[more]
A0A0S3S1Q6_PHAAN	5.7e-49	69.39	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G006400 PE=...	[more]

BLAST of CSPI03G19080 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10960.1	2.5e-48	65.28	ferredoxin 1	[more]
AT1G60950.1	1.6e-47	64.58	2Fe-2S ferredoxin-like superfamily protein	[more]
AT2G27510.1	1.3e-36	63.72	ferredoxin 3	[more]
AT5G10000.1	5.5e-27	50.00	ferredoxin 4	[more]
AT4G14890.1	1.5e-16	43.69	2Fe-2S ferredoxin-like superfamily protein	[more]

BLAST of CSPI03G19080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457047\|ref\|XP_004146260.1\|	1.4e-77	97.97	PREDICTED: ferredoxin-like [Cucumis sativus]	[more]
gi\|659112076\|ref\|XP_008456053.1\|	4.0e-72	90.54	PREDICTED: ferredoxin-like [Cucumis melo]	[more]
gi\|1009124224\|ref\|XP_015878951.1\|	7.9e-52	69.18	PREDICTED: ferredoxin [Ziziphus jujuba]	[more]
gi\|338173755\|gb\|AEI83424.1\|	1.4e-51	70.75	chloroplast ferredoxin I [Camellia sinensis]	[more]
gi\|1012102262\|ref\|XP_015957693.1\|	6.7e-51	69.80	PREDICTED: ferredoxin [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR006058	2Fe2S_fd_BS
IPR010241	Fd_pln
IPR012675	Beta-grasp_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0051536	iron-sulfur cluster binding
GO:0051537	2 iron, 2 sulfur cluster binding

Vocabulary: **Biological Process**
Term	Definition
GO:0022900	electron transport chain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0022900	electron transport chain
biological_process	GO:0009639	response to red or far red light
biological_process	GO:0009688	abscisic acid biosynthetic process
biological_process	GO:0006098	pentose-phosphate shunt
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009536	plastid
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G19080.1	CSPI03G19080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 62..133 score: 4.8
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROFILE	PS51085	2FE2S_FER_2	coord: 54..144 score: 12
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	unknown	SSF54292	2Fe-2S ferredoxin-like	coord: 34..145 score: 9.83
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 90..98 scor
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAMs	TIGR02008	TIGR02008	coord: 53..146 score: 8.6
IPR012675	Beta-grasp domain	GENE3D	G3DSA:3.10.20.30		coord: 51..146 score: 4.5
None	No IPR available	PANTHER	PTHR19370	NADH-CYTOCHROME B5 REDUCTASE	coord: 30..144 score: 3.4
None	No IPR available	PANTHER	PTHR19370:SF120	FERREDOXIN-1, CHLOROPLASTIC-RELATED	coord: 30..144 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G19080	Cla013019	Watermelon (97103) v1	cpiwmB242
CSPI03G19080	Csa3G222790	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G19080	MELO3C019438	Melon (DHL92) v3.5.1	cpimeB241
CSPI03G19080	ClCG05G009510	Watermelon (Charleston Gray)	cpiwcgB237
CSPI03G19080	Lsi05G001640	Bottle gourd (USVL1VR-Ls)	cpilsiB209
CSPI03G19080	MELO3C019438.2	Melon (DHL92) v3.6.1	cpimedB239
CSPI03G19080	CsaV3_3G019210	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G19080	Cla97C05G091890	Watermelon (97103) v2	cpiwmbB221
CSPI03G19080	Bhi01G001192	Wax gourd	cpiwgoB283
CSPI03G19080	Cucsa.032940	Cucumber (Gy14) v1	cgycpiB003
CSPI03G19080	CmaCh04G005340	Cucurbita maxima (Rimu)	cmacpiB705
CSPI03G19080	CmoCh16G004200	Cucurbita moschata (Rifu)	cmocpiB315
CSPI03G19080	CmoCh04G005700	Cucurbita moschata (Rifu)	cmocpiB698
CSPI03G19080	Cp4.1LG01g01870	Cucurbita pepo (Zucchini)	cpecpiB388
CSPI03G19080	CsGy3G018990	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G19080	Carg11316	Silver-seed gourd	carcpiB0685
CSPI03G19080	Carg13204	Silver-seed gourd	carcpiB0047

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G19080	Cucurbita maxima (Rimu)	cmacpiB326
CSPI03G19080	Cucurbita pepo (Zucchini)	cpecpiB208