Cla97C05G091890 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G091890
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Ferredoxin
Location	Cla97Chr05 : 9898097 .. 9898684 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTCATAGCCATAGCTGTCATTGGCCATTGCAAGATAAGGTTAGCCATAGCCATATGCTCTGTTTTCACTTTCCACATTAGAGCCACACAACCATTCTCTTCCAAAAAGAACCTCACTTTCACCATATCTTCCATTCCAAGTAGCAAAATGGCCAGCAGCCTCATCACCACCACTTCCTTCCTCTGGTCCCAGCCAGAGGCCGCGATGTTGAGGCTGGTGCCTAATGTGGGCGAGCGCTTGTTCGGGCTGCAGAAGGGAGGGAGCCGAGGTGGGCGAGTGACAGCGATGGCGACATACAAGGTGAAGCTAATAACACCAAGTGGAGAGAAAGTAGTCAAGTGTCCAGATAACGAGTACATTTTAGATGCGGCGGAGAACGATGGGATCGACCTTCCATACTCATGTAGAGCAGGAGCATGTTCTTCTTGTGTAGGAAAATTGAAATCAGGGAAGGTAGATCAGTCAGATGTTAGCTTCCTTGATGAAGATCAAATTGCACAAGGCTGGGTTCTTACTTGTTTGGCAACTCCTCTCTCTAATGTTGTTATTGAGACACACAAGGAGGAGGAATTTTCAAGTTAA

mRNA sequence

ATGGTTTTCATAGCCATAGCTGTCATTGGCCATTGCAAGATAAGGTTAGCCATAGCCATATGCTCTGTTTTCACTTTCCACATTAGAGCCACACAACCATTCTCTTCCAAAAAGAACCTCACTTTCACCATATCTTCCATTCCAAGTAGCAAAATGGCCAGCAGCCTCATCACCACCACTTCCTTCCTCTGGTCCCAGCCAGAGGCCGCGATGTTGAGGCTGGTGCCTAATGTGGGCGAGCGCTTGTTCGGGCTGCAGAAGGGAGGGAGCCGAGGTGGGCGAGTGACAGCGATGGCGACATACAAGGTGAAGCTAATAACACCAAGTGGAGAGAAAGTAGTCAAGTGTCCAGATAACGAGTACATTTTAGATGCGGCGGAGAACGATGGGATCGACCTTCCATACTCATGTAGAGCAGGAGCATGTTCTTCTTGTGTAGGAAAATTGAAATCAGGGAAGGTAGATCAGTCAGATGTTAGCTTCCTTGATGAAGATCAAATTGCACAAGGCTGGGTTCTTACTTGTTTGGCAACTCCTCTCTCTAATGTTGTTATTGAGACACACAAGGAGGAGGAATTTTCAAGTTAA

Coding sequence (CDS)

ATGGTTTTCATAGCCATAGCTGTCATTGGCCATTGCAAGATAAGGTTAGCCATAGCCATATGCTCTGTTTTCACTTTCCACATTAGAGCCACACAACCATTCTCTTCCAAAAAGAACCTCACTTTCACCATATCTTCCATTCCAAGTAGCAAAATGGCCAGCAGCCTCATCACCACCACTTCCTTCCTCTGGTCCCAGCCAGAGGCCGCGATGTTGAGGCTGGTGCCTAATGTGGGCGAGCGCTTGTTCGGGCTGCAGAAGGGAGGGAGCCGAGGTGGGCGAGTGACAGCGATGGCGACATACAAGGTGAAGCTAATAACACCAAGTGGAGAGAAAGTAGTCAAGTGTCCAGATAACGAGTACATTTTAGATGCGGCGGAGAACGATGGGATCGACCTTCCATACTCATGTAGAGCAGGAGCATGTTCTTCTTGTGTAGGAAAATTGAAATCAGGGAAGGTAGATCAGTCAGATGTTAGCTTCCTTGATGAAGATCAAATTGCACAAGGCTGGGTTCTTACTTGTTTGGCAACTCCTCTCTCTAATGTTGTTATTGAGACACACAAGGAGGAGGAATTTTCAAGTTAA

Protein sequence

MVFIAIAVIGHCKIRLAIAICSVFTFHIRATQPFSSKKNLTFTISSIPSSKMASSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGEKVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGWVLTCLATPLSNVVIETHKEEEFSS

Homology

[Close]

BLAST of Cla97C05G091890 vs. NCBI nr
Match: XP_008456215.1 (PREDICTED: ferredoxin-like [Cucumis melo])

HSP 1 Score: 207.2 bits (526), Expect = 5.0e-50
Identity = 104/144 (72.22%), Postives = 120/144 (83.33%), Query Frame = 0


Query: 52  MASSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGE 111
           M+S  ITTTSFL  Q     LR  PNVGE LFGLQK   RG RVTAMATYKVKLITPSG 
Sbjct: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQK---RGSRVTAMATYKVKLITPSGV 60

Query: 112 KVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGW 171
           K +KCPD+ YIL+ AE++G+DLPYSCRAGACSSC GKL SGKVDQS++SFLD+DQIA+GW
Sbjct: 61  KEIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNISFLDDDQIAKGW 120

Query: 172 VLTCLATPLSNVVIETHKEEEFSS 196
           V+ C+A PLS+VVIETHKEEEF++
Sbjct: 121 VINCMAYPLSDVVIETHKEEEFTN 141

[Close]

BLAST of Cla97C05G091890 vs. NCBI nr
Match: XP_022136605.1 (ferredoxin-2-like [Momordica charantia])

HSP 1 Score: 206.5 bits (524), Expect = 8.5e-50
Identity = 105/142 (73.94%), Postives = 118/142 (83.10%), Query Frame = 0


Query: 57  ITTTSFLWSQPEAAML-----RLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGE 116
           +TTT+     P  + L     R V NVGE LFGLQKG SR GRVTAMATYKVKLITPSGE
Sbjct: 1   MTTTTTALCSPITSFLGTARPRPVSNVGEGLFGLQKGCSRSGRVTAMATYKVKLITPSGE 60

Query: 117 KVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGW 176
           KVV C D++YILDAAE  G++LP+SCRAGACSSCVGKLKSGK+DQSDVSFLDEDQI +GW
Sbjct: 61  KVVDCLDSDYILDAAEAKGLELPHSCRAGACSSCVGKLKSGKLDQSDVSFLDEDQIEEGW 120

Query: 177 VLTCLATPLSNVVIETHKEEEF 194
           VLTCLA+P+S+VVIETHK EEF
Sbjct: 121 VLTCLASPMSDVVIETHKAEEF 142

[Close]

BLAST of Cla97C05G091890 vs. NCBI nr
Match: XP_022136604.1 (ferredoxin-like [Momordica charantia])

HSP 1 Score: 199.9 bits (507), Expect = 7.9e-48
Identity = 107/146 (73.29%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 49  SSKMASSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITP 108
           S+   S  I  TSFL  QP AA LR  PN+G+ +FGL KGGSRGGRV AMA YKV LITP
Sbjct: 3   STTALSGPIPATSFLRGQP-AAGLRPFPNMGQGVFGL-KGGSRGGRVRAMA-YKVTLITP 62

Query: 109 SGEKVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIA 168
           SGEK VKCP + YILDAAE DG+DLPYSCRAGACSSCVGK+ SGKVDQSD SFLD+DQ+A
Sbjct: 63  SGEKSVKCPPDSYILDAAEEDGLDLPYSCRAGACSSCVGKVVSGKVDQSDNSFLDDDQMA 122

Query: 169 QGWVLTCLATPLSNVVIETHKEEEFS 195
           +GWVLTC+A P S+VVIETHKE EFS
Sbjct: 123 EGWVLTCVAYPQSDVVIETHKEGEFS 145

[Close]

BLAST of Cla97C05G091890 vs. NCBI nr
Match: XP_022136608.1 (ferredoxin [Momordica charantia])

HSP 1 Score: 196.4 bits (498), Expect = 8.8e-47
Identity = 101/147 (68.71%), Postives = 114/147 (77.55%), Query Frame = 0


Query: 49  SSKMASSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITP 108
           SS   S  + +TSFL  QP A  LR V N G+ LFGL KGGSRGGRVTAMATYKVKLITP
Sbjct: 3   SSTALSGAMMSTSFLRKQP-AGGLRSVSNFGQGLFGL-KGGSRGGRVTAMATYKVKLITP 62

Query: 109 SGEKVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIA 168
            GEK   CPD+ Y+LD AE  G DLPYSCRAG+CSSC GK+ SGKVDQSD SFLD+DQ+ 
Sbjct: 63  EGEKEFSCPDDVYVLDQAEEQGFDLPYSCRAGSCSSCAGKVVSGKVDQSDNSFLDDDQLE 122

Query: 169 QGWVLTCLATPLSNVVIETHKEEEFSS 196
           +GWVLTC+A P S++VIETHKEEE  S
Sbjct: 123 EGWVLTCVAYPQSDIVIETHKEEELVS 147

[Close]

BLAST of Cla97C05G091890 vs. NCBI nr
Match: PON46312.1 (Ferredoxin [2Fe-2S] [Parasponia andersonii])

HSP 1 Score: 196.1 bits (497), Expect = 1.1e-46
Identity = 94/142 (66.20%), Postives = 114/142 (80.28%), Query Frame = 0


Query: 54  SSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGEKV 113
           SS + +TSF+  QP    LR +PNVG+ LFGL+   +RGGRVTAMA YKVKLITP GE  
Sbjct: 9   SSTMVSTSFVRRQPTTTSLRALPNVGQALFGLKATPNRGGRVTAMAAYKVKLITPEGEVE 68

Query: 114 VKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGWVL 173
            +CPD+ Y+LD AE +GIDLPYSCRAG+CSSCVGK+  G+VDQSD SFLD+DQ+A GWVL
Sbjct: 69  FECPDDVYVLDQAEENGIDLPYSCRAGSCSSCVGKVVKGEVDQSDNSFLDDDQLAGGWVL 128

Query: 174 TCLATPLSNVVIETHKEEEFSS 196
           TC+A P S+VVIETHKEEE ++
Sbjct: 129 TCVAYPQSDVVIETHKEEELAA 150

[Close]

BLAST of Cla97C05G091890 vs. TrEMBL
Match: tr|A0A1S3C2Q0|A0A1S3C2Q0_CUCME (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496218 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.3e-50
Identity = 104/144 (72.22%), Postives = 120/144 (83.33%), Query Frame = 0


Query: 52  MASSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGE 111
           M+S  ITTTSFL  Q     LR  PNVGE LFGLQK   RG RVTAMATYKVKLITPSG 
Sbjct: 1   MSSIPITTTSFLRYQLLTTTLRSAPNVGECLFGLQK---RGSRVTAMATYKVKLITPSGV 60

Query: 112 KVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGW 171
           K +KCPD+ YIL+ AE++G+DLPYSCRAGACSSC GKL SGKVDQS++SFLD+DQIA+GW
Sbjct: 61  KEIKCPDDNYILNVAEDEGLDLPYSCRAGACSSCAGKLISGKVDQSNISFLDDDQIAKGW 120

Query: 172 VLTCLATPLSNVVIETHKEEEFSS 196
           V+ C+A PLS+VVIETHKEEEF++
Sbjct: 121 VINCMAYPLSDVVIETHKEEEFTN 141

[Close]

BLAST of Cla97C05G091890 vs. TrEMBL
Match: tr|A0A2P5BC06|A0A2P5BC06_PARAD (Ferredoxin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_252590 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.6e-47
Identity = 94/142 (66.20%), Postives = 114/142 (80.28%), Query Frame = 0


Query: 54  SSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGEKV 113
           SS + +TSF+  QP    LR +PNVG+ LFGL+   +RGGRVTAMA YKVKLITP GE  
Sbjct: 9   SSTMVSTSFVRRQPTTTSLRALPNVGQALFGLKATPNRGGRVTAMAAYKVKLITPEGEVE 68

Query: 114 VKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGWVL 173
            +CPD+ Y+LD AE +GIDLPYSCRAG+CSSCVGK+  G+VDQSD SFLD+DQ+A GWVL
Sbjct: 69  FECPDDVYVLDQAEENGIDLPYSCRAGSCSSCVGKVVKGEVDQSDNSFLDDDQLAGGWVL 128

Query: 174 TCLATPLSNVVIETHKEEEFSS 196
           TC+A P S+VVIETHKEEE ++
Sbjct: 129 TCVAYPQSDVVIETHKEEELAA 150

[Close]

BLAST of Cla97C05G091890 vs. TrEMBL
Match: tr|A0A2P5BHJ1|A0A2P5BHJ1_9ROSA (Ferredoxin OS=Trema orientalis OX=63057 GN=TorRG33x02_320950 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 94/142 (66.20%), Postives = 113/142 (79.58%), Query Frame = 0


Query: 54  SSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGEKV 113
           SS + +TSF+  QP    LR +PNVG+ LFGL+   SRGGRVTAMA YKVKL+TP GE  
Sbjct: 9   SSAMVSTSFVRRQPTTTSLRALPNVGQALFGLKATPSRGGRVTAMAAYKVKLLTPEGEVE 68

Query: 114 VKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGWVL 173
            +CPD+ Y+LD AE  GIDLPYSCRAG+CSSCVGK+  G+VDQSD SFLD+DQ+A GWVL
Sbjct: 69  FECPDDVYVLDQAEEVGIDLPYSCRAGSCSSCVGKVVKGEVDQSDNSFLDDDQVAGGWVL 128

Query: 174 TCLATPLSNVVIETHKEEEFSS 196
           TC+A P S+VVIETHKEEE ++
Sbjct: 129 TCVAYPQSDVVIETHKEEELAA 150

[Close]

BLAST of Cla97C05G091890 vs. TrEMBL
Match: tr|A0A067EGN2|A0A067EGN2_CITSI (Ferredoxin OS=Citrus sinensis OX=2711 GN=CISIN_1g032230mg PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 7.1e-45
Identity = 88/141 (62.41%), Postives = 114/141 (80.85%), Query Frame = 0


Query: 54  SSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGEKV 113
           SS + +TSF+ ++P    L+ +PN+G+ LFGL+   +RGGRV AMATYKVKLITP GE+ 
Sbjct: 5   SSAMVSTSFIRNKPTVTSLKAMPNMGQALFGLKANNNRGGRVIAMATYKVKLITPEGEQE 64

Query: 114 VKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGWVL 173
           ++CPD+ YILDAAE+ GIDLPYSCRAG+CS+C GK+ SG VDQSD SFL++DQI  G+VL
Sbjct: 65  IECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKVVSGSVDQSDGSFLEDDQIDAGYVL 124

Query: 174 TCLATPLSNVVIETHKEEEFS 195
           TC+A P S+V +ETHK+EE S
Sbjct: 125 TCVAYPTSDVTVETHKDEEMS 145

[Close]

BLAST of Cla97C05G091890 vs. TrEMBL
Match: tr|F8SPG7|F8SPG7_CAMSI (Ferredoxin OS=Camellia sinensis OX=4442 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.5e-44
Identity = 93/142 (65.49%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 54  SSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGEKV 113
           SS + +TSFL  Q     LR +PNVG+ LFG++  G RGGRVTAMA YKVKL+TP G + 
Sbjct: 8   SSTMVSTSFLQRQQPVTSLRSLPNVGQALFGVK--GGRGGRVTAMAMYKVKLLTPEGPQE 67

Query: 114 VKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGWVL 173
            +CPD+ YILD AE  GIDLPYSCRAG+CSSC GKL  GKVDQSD SFLD+DQ+  GWVL
Sbjct: 68  FECPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKLTGGKVDQSDGSFLDDDQMDGGWVL 127

Query: 174 TCLATPLSNVVIETHKEEEFSS 196
           TC+A P S+VVIETHKEEE ++
Sbjct: 128 TCVAYPQSDVVIETHKEEELTA 147

[Close]

BLAST of Cla97C05G091890 vs. Swiss-Prot
Match: sp|P16972|FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 8.1e-44
Identity = 90/145 (62.07%), Postives = 108/145 (74.48%), Query Frame = 0


Query: 49  SSKMASSLITTTSFLWSQPEAAMLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYKVKLIT 108
           +S   SS I  TSF+   P    LR +P+   + LFGL+ G +RGGRVTAMATYKVK IT
Sbjct: 2   ASTALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFIT 61

Query: 109 PSGEKVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQI 168
           P GE  V+C D+ Y+LDAAE  GIDLPYSCRAG+CSSC GK+ SG VDQSD SFLD++QI
Sbjct: 62  PEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 121

Query: 169 AQGWVLTCLATPLSNVVIETHKEEE 193
            +G+VLTC A P S+V IETHKEE+
Sbjct: 122 GEGFVLTCAAYPTSDVTIETHKEED 146

[Close]

BLAST of Cla97C05G091890 vs. Swiss-Prot
Match: sp|O04090|FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.9e-43
Identity = 87/144 (60.42%), Postives = 110/144 (76.39%), Query Frame = 0


Query: 49  SSKMASSLITTTSFLWSQPEAAMLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYKVKLIT 108
           +S   SS I +TSFL  Q     LR +P    + LFGL+   +RGGRVTAMATYKVK IT
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFIT 61

Query: 109 PSGEKVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQI 168
           P GE+ V+C ++ Y+LDAAE  G+DLPYSCRAG+CSSC GK+ SG +DQSD SFLD++Q+
Sbjct: 62  PEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQM 121

Query: 169 AQGWVLTCLATPLSNVVIETHKEE 192
           ++G+VLTC+A P S+VVIETHKEE
Sbjct: 122 SEGYVLTCVAYPTSDVVIETHKEE 145

[Close]

BLAST of Cla97C05G091890 vs. Swiss-Prot
Match: sp|Q43517|FER1_SOLLC (Ferredoxin-1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SEND33 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.6e-42
Identity = 85/142 (59.86%), Postives = 105/142 (73.94%), Query Frame = 0


Query: 54  SSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGEKV 113
           S  + +TSFL  +P    L+ + NVGE LFGL+ G  R GR+T MA+YKVKLITP G   
Sbjct: 5   SGTMISTSFLPRKPAVTSLKAISNVGEALFGLKSG--RNGRITCMASYKVKLITPEGPIE 64

Query: 114 VKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGWVL 173
            +CPD+ YILD AE +G DLPYSCRAG+CSSC GK+ +G VDQSD +FLDEDQ A G+VL
Sbjct: 65  FECPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGSVDQSDGNFLDEDQEAAGFVL 124

Query: 174 TCLATPLSNVVIETHKEEEFSS 196
           TC+A P  +V IETHKEEE ++
Sbjct: 125 TCVAYPKGDVTIETHKEEELTA 144

[Close]

BLAST of Cla97C05G091890 vs. Swiss-Prot
Match: sp|Q9ZTS2|FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.6e-42
Identity = 83/139 (59.71%), Postives = 103/139 (74.10%), Query Frame = 0


Query: 54  SSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGEKV 113
           S+ + +TSF+  +P    L+ +PNVGE LFGL+   + GG+VT MA+YKVKLITP G   
Sbjct: 5   SATMISTSFMPRKPAVTSLKPIPNVGEALFGLK--SANGGKVTCMASYKVKLITPDGPIE 64

Query: 114 VKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGWVL 173
             CPDN YILD AE  G DLPYSCRAG+CSSC GK+  G VDQ+D +FLD+DQ+ +GWVL
Sbjct: 65  FDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVL 124

Query: 174 TCLATPLSNVVIETHKEEE 193
           TC+A P S+V IETHKE E
Sbjct: 125 TCVAYPQSDVTIETHKEAE 141

[Close]

BLAST of Cla97C05G091890 vs. Swiss-Prot
Match: sp|O04683|FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.4e-41
Identity = 80/122 (65.57%), Postives = 96/122 (78.69%), Query Frame = 0


Query: 74  LVPNVGERLFGLQKGGSRGGRVTAMATYKVKLITPSGEKVVKCPDNEYILDAAENDGIDL 133
           L  NVG  LFGL+   SR GRVTAMA YKV L+TP G++ ++CPD+ YILDAAE  GIDL
Sbjct: 28  LPTNVGRALFGLKSSASR-GRVTAMAAYKVTLVTPEGKQELECPDDVYILDAAEEAGIDL 87

Query: 134 PYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQIAQGWVLTCLATPLSNVVIETHKEEEF 193
           PYSCRAG+CSSC GK+ SG V+Q D SFLD+DQI +GWVLTC+A P  +V IETHKEEE 
Sbjct: 88  PYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEEL 147

Query: 194 SS 196
           ++
Sbjct: 148 TA 148

[Close]

BLAST of Cla97C05G091890 vs. TAIR10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 178.3 bits (451), Expect = 4.5e-45
Identity = 90/145 (62.07%), Postives = 108/145 (74.48%), Query Frame = 0


Query: 49  SSKMASSLITTTSFLWSQPEAAMLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYKVKLIT 108
           +S   SS I  TSF+   P    LR +P+   + LFGL+ G +RGGRVTAMATYKVK IT
Sbjct: 2   ASTALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFIT 61

Query: 109 PSGEKVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQI 168
           P GE  V+C D+ Y+LDAAE  GIDLPYSCRAG+CSSC GK+ SG VDQSD SFLD++QI
Sbjct: 62  PEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 121

Query: 169 AQGWVLTCLATPLSNVVIETHKEEE 193
            +G+VLTC A P S+V IETHKEE+
Sbjct: 122 GEGFVLTCAAYPTSDVTIETHKEED 146

[Close]

BLAST of Cla97C05G091890 vs. TAIR10
Match: AT1G10960.1 (ferredoxin 1)

HSP 1 Score: 174.9 bits (442), Expect = 5.0e-44
Identity = 87/144 (60.42%), Postives = 110/144 (76.39%), Query Frame = 0


Query: 49  SSKMASSLITTTSFLWSQPEAAMLRLVPNVG-ERLFGLQKGGSRGGRVTAMATYKVKLIT 108
           +S   SS I +TSFL  Q     LR +P    + LFGL+   +RGGRVTAMATYKVK IT
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFIT 61

Query: 109 PSGEKVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDVSFLDEDQI 168
           P GE+ V+C ++ Y+LDAAE  G+DLPYSCRAG+CSSC GK+ SG +DQSD SFLD++Q+
Sbjct: 62  PEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQM 121

Query: 169 AQGWVLTCLATPLSNVVIETHKEE 192
           ++G+VLTC+A P S+VVIETHKEE
Sbjct: 122 SEGYVLTCVAYPTSDVVIETHKEE 145

[Close]

BLAST of Cla97C05G091890 vs. TAIR10
Match: AT2G27510.1 (ferredoxin 3)

HSP 1 Score: 125.2 bits (313), Expect = 4.5e-29
Identity = 72/153 (47.06%), Postives = 94/153 (61.44%), Query Frame = 0


Query: 41  TFTISSIPSSKMASSLITTTSFLWSQPEAAMLRLVPNVGERLFGLQKGGSRGGRVTAMAT 100
           T  ISS   +K      TT   + ++     +     V  R FGL+   + GG  T  A 
Sbjct: 3   TVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRV-SRSFGLKCSANSGG-ATMSAV 62

Query: 101 YKVKLITPSG-EKVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSGKVDQSDV 160
           YKVKL+ P G E   +  D++YILDAAE  G+DLPYSCRAGACS+C G++ SG VDQSD 
Sbjct: 63  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 122

Query: 161 SFLDEDQIAQGWVLTCLATPLSNVVIETHKEEE 193
           SFL++  + +G+VLTC+A P S+ VI THKE E
Sbjct: 123 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETE 153

[Close]

BLAST of Cla97C05G091890 vs. TAIR10
Match: AT5G10000.1 (ferredoxin 4)

HSP 1 Score: 115.9 bits (289), Expect = 2.7e-26
Identity = 56/111 (50.45%), Postives = 80/111 (72.07%), Query Frame = 0


Query: 83  FGLQKGGSRGGRVTAMATYKVKLITPSG-EKVVKCPDNEYILDAAENDGIDLPYSCRAGA 142
           FGL       G+V A  + KVKLI+P G E+ ++  ++  IL++AEN G++LPYSCR+G 
Sbjct: 36  FGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGT 95

Query: 143 CSSCVGKLKSGKVDQSDVSFLDEDQIAQGWVLTCLATPLSNVVIETHKEEE 193
           C +C GKL SGKVDQS  SFL+E+QI +G++LTC+A PL + V+ THK+ +
Sbjct: 96  CGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSD 146

[Close]

BLAST of Cla97C05G091890 vs. TAIR10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11
Identity = 38/103 (36.89%), Postives = 55/103 (53.40%), Query Frame = 0


Query: 93  GRVTAMATYKVKLITPSGEKVVKCPDNEYILDAAENDGIDLPYSCRAGACSSCVGKLKSG 152
           GR+ A A YKV +        ++   +E IL  A + G+D+PY C  G C +C  KL +G
Sbjct: 46  GRIIARA-YKVVVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTG 105

Query: 153 KVDQSDVSFLDEDQIAQGWVLTCLATPLSNVVIETHKEEEFSS 196
            VDQS    L +D + +G+ L C + P S+  I+   EEE  S
Sbjct: 106 TVDQSG-GMLSDDVVERGYTLLCASYPTSDCHIKMIPEEELLS 146

The following BLAST results are available for this feature:

BLAST of Cla97C05G091890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456215.1	5.0e-50	72.22	PREDICTED: ferredoxin-like [Cucumis melo]	[more]
XP_022136605.1	8.5e-50	73.94	ferredoxin-2-like [Momordica charantia]	[more]
XP_022136604.1	7.9e-48	73.29	ferredoxin-like [Momordica charantia]	[more]
XP_022136608.1	8.8e-47	68.71	ferredoxin [Momordica charantia]	[more]
PON46312.1	1.1e-46	66.20	Ferredoxin [2Fe-2S] [Parasponia andersonii]	[more]

BLAST of Cla97C05G091890 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C2Q0\|A0A1S3C2Q0_CUCME	3.3e-50	72.22	Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496218 PE=3 SV=1	[more]
tr\|A0A2P5BC06\|A0A2P5BC06_PARAD	7.6e-47	66.20	Ferredoxin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_252590 PE=3 SV=1	[more]
tr\|A0A2P5BHJ1\|A0A2P5BHJ1_9ROSA	1.3e-46	66.20	Ferredoxin OS=Trema orientalis OX=63057 GN=TorRG33x02_320950 PE=3 SV=1	[more]
tr\|A0A067EGN2\|A0A067EGN2_CITSI	7.1e-45	62.41	Ferredoxin OS=Citrus sinensis OX=2711 GN=CISIN_1g032230mg PE=3 SV=1	[more]
tr\|F8SPG7\|F8SPG7_CAMSI	3.5e-44	65.49	Ferredoxin OS=Camellia sinensis OX=4442 PE=2 SV=1	[more]

BLAST of Cla97C05G091890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P16972\|FER2_ARATH	8.1e-44	62.07	Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1	[more]
sp\|O04090\|FER1_ARATH	8.9e-43	60.42	Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1	[more]
sp\|Q43517\|FER1_SOLLC	7.6e-42	59.86	Ferredoxin-1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SEND33 PE=2 SV=1	[more]
sp\|Q9ZTS2\|FER_CAPAN	7.6e-42	59.71	Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1	[more]
sp\|O04683\|FER1_MESCR	6.4e-41	65.57	Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]

BLAST of Cla97C05G091890 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G60950.1	4.5e-45	62.07	2Fe-2S ferredoxin-like superfamily protein	[more]
AT1G10960.1	5.0e-44	60.42	ferredoxin 1	[more]
AT2G27510.1	4.5e-29	47.06	ferredoxin 3	[more]
AT5G10000.1	2.7e-26	50.45	ferredoxin 4	[more]
AT4G14890.1	1.9e-11	36.89	2Fe-2S ferredoxin-like superfamily protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051536	iron-sulfur cluster binding
GO:0051537	2 iron, 2 sulfur cluster binding
GO:0009055	electron carrier activity

Vocabulary: **Biological Process**
Term	Definition
GO:0022900	electron transport chain

Vocabulary: **INTERPRO**
Term	Definition
IPR036010	2Fe-2S_ferredoxin-like_sf
IPR006058	2Fe2S_fd_BS
IPR001041	2Fe-2S_ferredoxin-type
IPR012675	Beta-grasp_dom_sf
IPR010241	Fd_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0009639	response to red or far red light
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009536	plastid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G091890.1	Cla97C05G091890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 99..193 e-value: 1.8E-45 score: 150.6
IPR012675	Beta-grasp domain superfamily	GENE3D	G3DSA:3.10.20.30		coord: 98..195 e-value: 1.2E-32 score: 113.7
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 108..179 e-value: 2.1E-18 score: 65.9
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 101..191 score: 12.833
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 103..186 e-value: 2.17964E-30 score: 107.481
None	No IPR available	PANTHER	PTHR43112	FAMILY NOT NAMED	coord: 70..192
None	No IPR available	PANTHER	PTHR43112:SF4	FERREDOXIN-3, CHLOROPLASTIC-RELATED	coord: 70..192
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 137..145
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	SSF54292	2Fe-2S ferredoxin-like	coord: 81..190

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G091890	Cla013019	Watermelon (97103) v1	wmwmbB206
Cla97C05G091890	Csa3G222790	Cucumber (Chinese Long) v2	cuwmbB215
Cla97C05G091890	MELO3C019438	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G091890	ClCG05G009510	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G091890	CSPI03G19080	Wild cucumber (PI 183967)	cpiwmbB221
Cla97C05G091890	Cucsa.032940	Cucumber (Gy14) v1	cgywmbB003
Cla97C05G091890	CmaCh04G005340	Cucurbita maxima (Rimu)	cmawmbB763
Cla97C05G091890	CmoCh16G004200	Cucurbita moschata (Rifu)	cmowmbB332
Cla97C05G091890	CmoCh04G005700	Cucurbita moschata (Rifu)	cmowmbB735
Cla97C05G091890	Lsi05G001640	Bottle gourd (USVL1VR-Ls)	lsiwmbB329
Cla97C05G091890	CsGy3G018990	Cucumber (Gy14) v2	cgybwmbB206
Cla97C05G091890	MELO3C019438.2	Melon (DHL92) v3.6.1	medwmbB424
Cla97C05G091890	Carg13204	Silver-seed gourd	carwmbB0042
Cla97C05G091890	Carg11316	Silver-seed gourd	carwmbB0681
Cla97C05G091890	CsaV3_3G019210	Cucumber (Chinese Long) v3	cucwmbB217
Cla97C05G091890	Bhi01G001192	Wax gourd	wgowmbB179

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G091890	Cucurbita maxima (Rimu)	cmawmbB347