Csa3G222790 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G222790
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ferredoxin I; contains IPR010241 (Ferredoxin [2Fe-2S], plant), IPR012675 (Beta-grasp domain)
Location	Chr3 : 14752817 .. 14753532 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGCAGCAAAATGACCAGTTCACCAGCACTTTCCAGTGTGACATTGAACACCTCGTTTCTCCAGAAGCAGCCAACAACAAGGATAAGGTTGGTGTTGAACTTTGGCCAAGATTTGTTTAAGCTGAAGGGTGGCAGCAGCCGAGGTGGGCGAGTGATTGCAATGGCAGAGTACAACGTGAAGTTGATCACACCAACAGGAGAGACGGAGTTCAAGTGCCCGGATGACGAATACATTCTTGATCGAGCTGAGCAAATGGGATTTGATCTTCCATATTCATGTAGAGCAGGGTCTTGCTCTTCTTGTGCAGGGAAAGTAGTATCAGGGAAGGTGGATCAGTCAGATGGGAGCTACCTTGAGGATGATCAGATGGATGAAGGTTGGGTTTTAACTTGTGTTGCTTACCCGCAGTCAGATGTTGTCATTGAGACACACAAGGAGGAATATCTATTTAGTTAGTTAGTTAAGTCTGCTTCAAGATCTAGTTATTTATCTCCATGAAATGATTCTGGCTTGCCTTCAGGTCCTTAATCAGATGTCTCATGGAGTTTTTTGATCACTTTTCTTAGTTTTACACCAACATTCTAAAACCAATTTAGGTTAGGATTTAAATTGATATATTTGTAAAAATTTTAGATTTAAATTGGTACAATTATTTAGTTTAGGGTTTAGATTGACATAACTTCAAAGTTCAGGGTTTAAATTGATGCACATTAT

mRNA sequence

ATGACCAGTTCACCAGCACTTTCCAGTGTGACATTGAACACCTCGTTTCTCCAGAAGCAGCCAACAACAAGGATAAGGTTGGTGTTGAACTTTGGCCAAGATTTGTTTAAGCTGAAGGGTGGCAGCAGCCGAGGTGGGCGAGTGATTGCAATGGCAGAGTACAACGTGAAGTTGATCACACCAACAGGAGAGACGGAGTTCAAGTGCCCGGATGACGAATACATTCTTGATCGAGCTGAGCAAATGGGATTTGATCTTCCATATTCATGTAGAGCAGGGTCTTGCTCTTCTTGTGCAGGGAAAGTAGTATCAGGGAAGGTGGATCAGTCAGATGGGAGCTACCTTGAGGATGATCAGATGGATGAAGGTTGGGTTTTAACTTGTGTTGCTTACCCGCAGTCAGATGTTGTCATTGAGACACACAAGGAGGAATATCTATTTAGTTAG

Coding sequence (CDS)

ATGACCAGTTCACCAGCACTTTCCAGTGTGACATTGAACACCTCGTTTCTCCAGAAGCAGCCAACAACAAGGATAAGGTTGGTGTTGAACTTTGGCCAAGATTTGTTTAAGCTGAAGGGTGGCAGCAGCCGAGGTGGGCGAGTGATTGCAATGGCAGAGTACAACGTGAAGTTGATCACACCAACAGGAGAGACGGAGTTCAAGTGCCCGGATGACGAATACATTCTTGATCGAGCTGAGCAAATGGGATTTGATCTTCCATATTCATGTAGAGCAGGGTCTTGCTCTTCTTGTGCAGGGAAAGTAGTATCAGGGAAGGTGGATCAGTCAGATGGGAGCTACCTTGAGGATGATCAGATGGATGAAGGTTGGGTTTTAACTTGTGTTGCTTACCCGCAGTCAGATGTTGTCATTGAGACACACAAGGAGGAATATCTATTTAGTTAG

Protein sequence

MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLITPTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDEGWVLTCVAYPQSDVVIETHKEEYLFS*

Homology

[Close]

BLAST of Csa3G222790 vs. Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.8e-46
Identity = 94/144 (65.28%), Postives = 108/144 (75.00%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQPTTRIRLVLNFG--QDLFKLKGGSSRGGRVIAMAEYNVKLIT 62
           +S ALSS  ++TSFL++Q T      L F   Q LF LK  ++RGGRV AMA Y VK IT
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFIT 61

Query: 63  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 122
           P GE E +C +D Y+LD AE+ G DLPYSCRAGSCSSCAGKVVSG +DQSD S+L+D+QM
Sbjct: 62  PEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQM 121

Query: 123 DEGWVLTCVAYPQSDVVIETHKEE 145
            EG+VLTCVAYP SDVVIETHKEE
Sbjct: 122 SEGYVLTCVAYPTSDVVIETHKEE 145

[Close]

BLAST of Csa3G222790 vs. Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.5e-46
Identity = 91/144 (63.19%), Postives = 104/144 (72.22%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLITPT 62
           ++ ALS  T++T+F  K P     L  N G+ LF LK  +SRG RV AMA Y V L+TP 
Sbjct: 4   TTAALSGATMSTAFAPKTPPMTAALPTNVGRALFGLKSSASRG-RVTAMAAYKVTLVTPE 63

Query: 63  GETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDE 122
           G+ E +CPDD YILD AE+ G DLPYSCRAGSCSSCAGKV SG V+Q DGS+L+DDQ+ E
Sbjct: 64  GKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKE 123

Query: 123 GWVLTCVAYPQSDVVIETHKEEYL 147
           GWVLTCVAYP  DV IETHKEE L
Sbjct: 124 GWVLTCVAYPTGDVTIETHKEEEL 146

[Close]

BLAST of Csa3G222790 vs. Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.5e-45
Identity = 87/142 (61.27%), Postives = 109/142 (76.76%), Query Frame = 1


Query: 6   ALSSVTLNTSFLQKQPT-TRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLITPTGE 65
           ++S+  ++TSF+ ++P  T ++ + N G+ LF LK  S+ GG+V  MA Y VKLITP G 
Sbjct: 3   SVSATMISTSFMPRKPAVTSLKPIPNVGEALFGLK--SANGGKVTCMASYKVKLITPDGP 62

Query: 66  TEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDEGW 125
            EF CPD+ YILD+AE+ G DLPYSCRAGSCSSCAGK+  G VDQ+DG++L+DDQ++EGW
Sbjct: 63  IEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGW 122

Query: 126 VLTCVAYPQSDVVIETHKEEYL 147
           VLTCVAYPQSDV IETHKE  L
Sbjct: 123 VLTCVAYPQSDVTIETHKEAEL 142

[Close]

BLAST of Csa3G222790 vs. Swiss-Prot
Match: FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-44
Identity = 91/144 (63.19%), Postives = 107/144 (74.31%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQPTT-RIRLVLNFG-QDLFKLKGGSSRGGRVIAMAEYNVKLIT 62
           +S ALSS  + TSF+++ P    +R + +   Q LF LK G++RGGRV AMA Y VK IT
Sbjct: 2   ASTALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFIT 61

Query: 63  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 122
           P GE E +C DD Y+LD AE+ G DLPYSCRAGSCSSCAGKVVSG VDQSD S+L+D+Q+
Sbjct: 62  PEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 121

Query: 123 DEGWVLTCVAYPQSDVVIETHKEE 145
            EG+VLTC AYP SDV IETHKEE
Sbjct: 122 GEGFVLTCAAYPTSDVTIETHKEE 145

[Close]

BLAST of Csa3G222790 vs. Swiss-Prot
Match: FER1_PEA (Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2)

HSP 1 Score: 179.1 bits (453), Expect = 3.6e-44
Identity = 88/147 (59.86%), Postives = 104/147 (70.75%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQPTTR-IRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLI 60
           M ++PAL    ++TSFL+ QP    +     F      LK    RG   +AMA Y VKL+
Sbjct: 1   MATTPALYGTAVSTSFLRTQPMPMSVTTTKAFSNGFLGLKTSLKRGDLAVAMASYKVKLV 60

Query: 61  TPTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQ 120
           TP G  EF+CP D YILD AE++G DLPYSCRAGSCSSCAGKVV G+VDQSDGS+L+D+Q
Sbjct: 61  TPDGTQEFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQ 120

Query: 121 MDEGWVLTCVAYPQSDVVIETHKEEYL 147
           ++ G+VLTCVAYP SDVVIETHKEE L
Sbjct: 121 IEAGFVLTCVAYPTSDVVIETHKEEDL 147

[Close]

BLAST of Csa3G222790 vs. TrEMBL
Match: A0A0A0LAD3_CUCSA (Ferredoxin-2 OS=Cucumis sativus GN=Csa_3G222790 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-79
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT 60
           MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT
Sbjct: 1   MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120
           PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM
Sbjct: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120

Query: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 149
           DEGWVLTCVAYPQSDVVIETHKEEYLFS
Sbjct: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 148

[Close]

BLAST of Csa3G222790 vs. TrEMBL
Match: F8SPG7_CAMSI (Chloroplast ferredoxin I OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.6e-51
Identity = 104/147 (70.75%), Postives = 120/147 (81.63%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQ-PTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLI 60
           M  + +LSS  ++TSFLQ+Q P T +R + N GQ LF +KGG  RGGRV AMA Y VKL+
Sbjct: 1   MAMAASLSSTMVSTSFLQRQQPVTSLRSLPNVGQALFGVKGG--RGGRVTAMAMYKVKLL 60

Query: 61  TPTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQ 120
           TP G  EF+CPDD YILD+AE++G DLPYSCRAGSCSSCAGK+  GKVDQSDGS+L+DDQ
Sbjct: 61  TPEGPQEFECPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKLTGGKVDQSDGSFLDDDQ 120

Query: 121 MDEGWVLTCVAYPQSDVVIETHKEEYL 147
           MD GWVLTCVAYPQSDVVIETHKEE L
Sbjct: 121 MDGGWVLTCVAYPQSDVVIETHKEEEL 145

[Close]

BLAST of Csa3G222790 vs. TrEMBL
Match: A0A067L2U1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04972 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.7e-49
Identity = 100/144 (69.44%), Postives = 116/144 (80.56%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLITPT 62
           +S ALSS  ++TSF ++QP T +R + N GQ LF LK  SSRGG+  AMA Y VKL+TP 
Sbjct: 2   ASTALSSAMVSTSFTRRQPVTSLRALPNVGQALFGLK--SSRGGKFKAMASYKVKLLTPE 61

Query: 63  GETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDE 122
           GE   +CPDD YILD AE+ G DLPYSCRAGSCSSCAGKVV G+VDQSDGS+L+D+QM+E
Sbjct: 62  GEKVIECPDDVYILDAAEEAGVDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQMEE 121

Query: 123 GWVLTCVAYPQSDVVIETHKEEYL 147
           GWVLTCVAYP SDVVIETHKEE L
Sbjct: 122 GWVLTCVAYPTSDVVIETHKEEDL 143

[Close]

BLAST of Csa3G222790 vs. TrEMBL
Match: F6HK77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00270 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.8e-49
Identity = 97/140 (69.29%), Postives = 113/140 (80.71%), Query Frame = 1


Query: 7   LSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLITPTGETE 66
           LS   ++TSF+++QP T +R + N GQ LF LK G    GRV AMA Y VKLITP G  E
Sbjct: 4   LSGAMVSTSFIRRQPVTSLRALPNVGQALFGLKAGR---GRVTAMAVYKVKLITPEGAKE 63

Query: 67  FKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDEGWVL 126
           F+CPDD Y+LD AE++G DLPYSCRAGSCSSCAG+VV G VDQSDGS+LED+QM+EGWVL
Sbjct: 64  FECPDDVYVLDHAEEIGIDLPYSCRAGSCSSCAGRVVEGTVDQSDGSFLEDEQMEEGWVL 123

Query: 127 TCVAYPQSDVVIETHKEEYL 147
           TCVAYPQSD+VIETHKEE L
Sbjct: 124 TCVAYPQSDLVIETHKEEEL 140

[Close]

BLAST of Csa3G222790 vs. TrEMBL
Match: A0A067EGN2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032230mg PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.3e-48
Identity = 97/140 (69.29%), Postives = 114/140 (81.43%), Query Frame = 1


Query: 6   ALSSVTLNTSFLQKQPT-TRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLITPTGE 65
           ALSS  ++TSF++ +PT T ++ + N GQ LF LK  ++RGGRVIAMA Y VKLITP GE
Sbjct: 3   ALSSAMVSTSFIRNKPTVTSLKAMPNMGQALFGLKANNNRGGRVIAMATYKVKLITPEGE 62

Query: 66  TEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDEGW 125
            E +CPDD YILD AE  G DLPYSCRAGSCS+CAGKVVSG VDQSDGS+LEDDQ+D G+
Sbjct: 63  QEIECPDDTYILDAAEDAGIDLPYSCRAGSCSTCAGKVVSGSVDQSDGSFLEDDQIDAGY 122

Query: 126 VLTCVAYPQSDVVIETHKEE 145
           VLTCVAYP SDV +ETHK+E
Sbjct: 123 VLTCVAYPTSDVTVETHKDE 142

[Close]

BLAST of Csa3G222790 vs. TAIR10
Match: AT1G10960.1 (AT1G10960.1 ferredoxin 1)

HSP 1 Score: 185.7 bits (470), Expect = 2.1e-47
Identity = 94/144 (65.28%), Postives = 108/144 (75.00%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQPTTRIRLVLNFG--QDLFKLKGGSSRGGRVIAMAEYNVKLIT 62
           +S ALSS  ++TSFL++Q T      L F   Q LF LK  ++RGGRV AMA Y VK IT
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFIT 61

Query: 63  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 122
           P GE E +C +D Y+LD AE+ G DLPYSCRAGSCSSCAGKVVSG +DQSD S+L+D+QM
Sbjct: 62  PEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQM 121

Query: 123 DEGWVLTCVAYPQSDVVIETHKEE 145
            EG+VLTCVAYP SDVVIETHKEE
Sbjct: 122 SEGYVLTCVAYPTSDVVIETHKEE 145

[Close]

BLAST of Csa3G222790 vs. TAIR10
Match: AT1G60950.1 (AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 179.9 bits (455), Expect = 1.2e-45
Identity = 91/144 (63.19%), Postives = 107/144 (74.31%), Query Frame = 1


Query: 3   SSPALSSVTLNTSFLQKQPTT-RIRLVLNFG-QDLFKLKGGSSRGGRVIAMAEYNVKLIT 62
           +S ALSS  + TSF+++ P    +R + +   Q LF LK G++RGGRV AMA Y VK IT
Sbjct: 2   ASTALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFIT 61

Query: 63  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 122
           P GE E +C DD Y+LD AE+ G DLPYSCRAGSCSSCAGKVVSG VDQSD S+L+D+Q+
Sbjct: 62  PEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 121

Query: 123 DEGWVLTCVAYPQSDVVIETHKEE 145
            EG+VLTC AYP SDV IETHKEE
Sbjct: 122 GEGFVLTCAAYPTSDVTIETHKEE 145

[Close]

BLAST of Csa3G222790 vs. TAIR10
Match: AT2G27510.1 (AT2G27510.1 ferredoxin 3)

HSP 1 Score: 146.7 bits (369), Expect = 1.1e-35
Identity = 79/153 (51.63%), Postives = 102/153 (66.67%), Query Frame = 1


Query: 7   LSSVTLNTSFLQKQPTTRIRLVLNFGQDL-----------FKLKGGSSRGGRVIAMAEYN 66
           +SS ++  + L+ Q T +  L+ N   +L           F LK  ++ GG  ++ A Y 
Sbjct: 6   ISSTSMTKAVLRSQTTNK--LITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMS-AVYK 65

Query: 67  VKLITPTG-ETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSY 126
           VKL+ P G E EF+  DD+YILD AE+ G DLPYSCRAG+CS+CAG++VSG VDQSDGS+
Sbjct: 66  VKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSF 125

Query: 127 LEDDQMDEGWVLTCVAYPQSDVVIETHKEEYLF 148
           LED  +++G+VLTCVAYPQSD VI THKE  LF
Sbjct: 126 LEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155

[Close]

BLAST of Csa3G222790 vs. TAIR10
Match: AT5G10000.1 (AT5G10000.1 ferredoxin 4)

HSP 1 Score: 116.3 bits (290), Expect = 1.6e-26
Identity = 64/132 (48.48%), Postives = 83/132 (62.88%), Query Frame = 1


Query: 18  QKQPTTRIRLVLNFGQDLFKLKGGSSRG--GRVIAMAEYNVKLITPTGET-EFKCPDDEY 77
           Q Q TTR+     FG         SSRG  G+V A     VKLI+P GE  E +  +D  
Sbjct: 23  QAQLTTRLNNTTYFGLS-------SSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCC 82

Query: 78  ILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQMDEGWVLTCVAYPQS 137
           IL+ AE  G +LPYSCR+G+C +C GK+VSGKVDQS GS+LE++Q+ +G++LTC+A P  
Sbjct: 83  ILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLE 142

Query: 138 DVVIETHKEEYL 147
           D V+ THK+  L
Sbjct: 143 DCVVYTHKQSDL 147

[Close]

BLAST of Csa3G222790 vs. TAIR10
Match: AT4G14890.1 (AT4G14890.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-15
Identity = 45/103 (43.69%), Postives = 56/103 (54.37%), Query Frame = 1


Query: 46  GRVIAMAEYNVKLITPTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSG 105
           GR+IA A Y V +      TE +   DE IL +A   G D+PY C  G C +C  K+V+G
Sbjct: 46  GRIIARA-YKVVVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTG 105

Query: 106 KVDQSDGSYLEDDQMDEGWVLTCVAYPQSDVVIETHKEEYLFS 149
            VDQS G  L DD ++ G+ L C +YP SD  I+   EE L S
Sbjct: 106 TVDQS-GGMLSDDVVERGYTLLCASYPTSDCHIKMIPEEELLS 146

[Close]

BLAST of Csa3G222790 vs. NCBI nr
Match: gi|449457047|ref|XP_004146260.1| (PREDICTED: ferredoxin-like [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 4.5e-79
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT 60
           MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT
Sbjct: 1   MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120
           PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM
Sbjct: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120

Query: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 149
           DEGWVLTCVAYPQSDVVIETHKEEYLFS
Sbjct: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 148

[Close]

BLAST of Csa3G222790 vs. NCBI nr
Match: gi|659112076|ref|XP_008456053.1| (PREDICTED: ferredoxin-like [Cucumis melo])

HSP 1 Score: 275.0 bits (702), Expect = 7.6e-71
Identity = 133/148 (89.86%), Postives = 140/148 (94.59%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT 60
           M SSPALSS TLNTSFL+KQP TR+  VLNFGQDLF LKGGSSRGGRVIAMAEYNVKLIT
Sbjct: 1   MASSPALSSATLNTSFLRKQPATRLGSVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120
           P GETEFKC DD+YILDRAE+MGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYL++DQM
Sbjct: 61  PAGETEFKCQDDDYILDRAEEMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDEDQM 120

Query: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 149
           +EGWVLTCVAYPQSDVVIETHKEEYLFS
Sbjct: 121 NEGWVLTCVAYPQSDVVIETHKEEYLFS 148

[Close]

BLAST of Csa3G222790 vs. NCBI nr
Match: gi|1009124224|ref|XP_015878951.1| (PREDICTED: ferredoxin [Ziziphus jujuba])

HSP 1 Score: 209.1 bits (531), Expect = 5.1e-51
Identity = 101/146 (69.18%), Postives = 119/146 (81.51%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT 60
           M ++ ALS   ++TSF+++QP T +R + N GQ LF LK  SSRGGRV AMA Y VKL+T
Sbjct: 1   MATAAALSGTMVSTSFMRRQPVTSLRSLPNVGQALFGLK--SSRGGRVTAMASYKVKLVT 60

Query: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120
           P G  EF+CPDD YILD AE++G DLPYSCRAGSCSSCAGKVV G VDQSDGS+L+D+Q+
Sbjct: 61  PDGPQEFECPDDVYILDHAEEIGIDLPYSCRAGSCSSCAGKVVQGSVDQSDGSFLDDEQI 120

Query: 121 DEGWVLTCVAYPQSDVVIETHKEEYL 147
           + GWVLTCVAYPQSDVVIETHKEE L
Sbjct: 121 ESGWVLTCVAYPQSDVVIETHKEEEL 144

[Close]

BLAST of Csa3G222790 vs. NCBI nr
Match: gi|338173755|gb|AEI83424.1| (chloroplast ferredoxin I [Camellia sinensis])

HSP 1 Score: 209.1 bits (531), Expect = 5.1e-51
Identity = 104/147 (70.75%), Postives = 120/147 (81.63%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQ-PTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLI 60
           M  + +LSS  ++TSFLQ+Q P T +R + N GQ LF +KGG  RGGRV AMA Y VKL+
Sbjct: 1   MAMAASLSSTMVSTSFLQRQQPVTSLRSLPNVGQALFGVKGG--RGGRVTAMAMYKVKLL 60

Query: 61  TPTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQ 120
           TP G  EF+CPDD YILD+AE++G DLPYSCRAGSCSSCAGK+  GKVDQSDGS+L+DDQ
Sbjct: 61  TPEGPQEFECPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKLTGGKVDQSDGSFLDDDQ 120

Query: 121 MDEGWVLTCVAYPQSDVVIETHKEEYL 147
           MD GWVLTCVAYPQSDVVIETHKEE L
Sbjct: 121 MDGGWVLTCVAYPQSDVVIETHKEEEL 145

[Close]

BLAST of Csa3G222790 vs. NCBI nr
Match: gi|1012102262|ref|XP_015957693.1| (PREDICTED: ferredoxin [Arachis duranensis])

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-50
Identity = 104/149 (69.80%), Postives = 122/149 (81.88%), Query Frame = 1


Query: 1   MTSSPALSSVTLNTSFLQKQP---TTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVK 60
           M ++PALS   ++TSFL++QP   TT ++   N GQ LF +KGG  RGGRV AMA Y VK
Sbjct: 1   MATTPALSGTMVSTSFLRRQPVATTTSLKAFPNVGQALFGVKGG--RGGRVTAMASYKVK 60

Query: 61  LITPTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLED 120
           LITP G  EF CPDD YILD+AE++G +LPYSCRAGSCSSCAGKVV+GKVDQSDGS+L+D
Sbjct: 61  LITPEGPQEFDCPDDVYILDQAEEVGVELPYSCRAGSCSSCAGKVVNGKVDQSDGSFLDD 120

Query: 121 DQMDEGWVLTCVAYPQSDVVIETHKEEYL 147
           DQ+D G+VLTCVAYPQSDVVIETHKEE L
Sbjct: 121 DQIDGGFVLTCVAYPQSDVVIETHKEEEL 147

The following BLAST results are available for this feature:

BLAST of Csa3G222790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FER1_ARATH	3.8e-46	65.28	Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1	[more]
FER1_MESCR	6.5e-46	63.19	Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1	[more]
FER_CAPAN	2.5e-45	61.27	Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1	[more]
FER2_ARATH	2.1e-44	63.19	Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1	[more]
FER1_PEA	3.6e-44	59.86	Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2	[more]

BLAST of Csa3G222790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAD3_CUCSA	3.1e-79	100.00	Ferredoxin-2 OS=Cucumis sativus GN=Csa_3G222790 PE=4 SV=1	[more]
F8SPG7_CAMSI	3.6e-51	70.75	Chloroplast ferredoxin I OS=Camellia sinensis PE=2 SV=1	[more]
A0A067L2U1_JATCU	5.7e-49	69.44	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04972 PE=4 SV=1	[more]
F6HK77_VITVI	9.8e-49	69.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00270 PE=4 SV=...	[more]
A0A067EGN2_CITSI	1.3e-48	69.29	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032230mg PE=4 SV=1	[more]

BLAST of Csa3G222790 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10960.1	2.1e-47	65.28	ferredoxin 1	[more]
AT1G60950.1	1.2e-45	63.19	2Fe-2S ferredoxin-like superfamily protein	[more]
AT2G27510.1	1.1e-35	51.63	ferredoxin 3	[more]
AT5G10000.1	1.6e-26	48.48	ferredoxin 4	[more]
AT4G14890.1	1.3e-15	43.69	2Fe-2S ferredoxin-like superfamily protein	[more]

BLAST of Csa3G222790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457047\|ref\|XP_004146260.1\|	4.5e-79	100.00	PREDICTED: ferredoxin-like [Cucumis sativus]	[more]
gi\|659112076\|ref\|XP_008456053.1\|	7.6e-71	89.86	PREDICTED: ferredoxin-like [Cucumis melo]	[more]
gi\|1009124224\|ref\|XP_015878951.1\|	5.1e-51	69.18	PREDICTED: ferredoxin [Ziziphus jujuba]	[more]
gi\|338173755\|gb\|AEI83424.1\|	5.1e-51	70.75	chloroplast ferredoxin I [Camellia sinensis]	[more]
gi\|1012102262\|ref\|XP_015957693.1\|	2.0e-50	69.80	PREDICTED: ferredoxin [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001041	2Fe-2S_ferredoxin-type
IPR006058	2Fe2S_fd_BS
IPR010241	Fd_pln
IPR012675	Beta-grasp_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0051536	iron-sulfur cluster binding
GO:0051537	2 iron, 2 sulfur cluster binding

Vocabulary: **Biological Process**
Term	Definition
GO:0022900	electron transport chain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0022900	electron transport chain
biological_process	GO:0009639	response to red or far red light
biological_process	GO:0009688	abscisic acid biosynthetic process
biological_process	GO:0006098	pentose-phosphate shunt
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009536	plastid
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU106686	cucumber EST collection version 3.0	transcribed_cluster
CU169640	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G222790.1	Csa3G222790.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU169640	CU169640	transcribed_cluster
CU106686	CU106686	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 62..133 score: 4.8
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROFILE	PS51085	2FE2S_FER_2	coord: 54..144 score: 12
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	unknown	SSF54292	2Fe-2S ferredoxin-like	coord: 35..145 score: 1.44
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 90..98 scor
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAMs	TIGR02008	TIGR02008	coord: 53..146 score: 8.6
IPR012675	Beta-grasp domain	GENE3D	G3DSA:3.10.20.30		coord: 51..146 score: 4.5
None	No IPR available	PANTHER	PTHR19370	NADH-CYTOCHROME B5 REDUCTASE	coord: 30..144 score: 1.5
None	No IPR available	PANTHER	PTHR19370:SF120	FERREDOXIN-1, CHLOROPLASTIC-RELATED	coord: 30..144 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G222790	Cla013019	Watermelon (97103) v1	cuwmB243
Csa3G222790	MELO3C019438	Melon (DHL92) v3.5.1	cumeB166
Csa3G222790	ClCG05G009510	Watermelon (Charleston Gray)	cuwcgB230
Csa3G222790	Lsi05G001640	Bottle gourd (USVL1VR-Ls)	culsiB211
Csa3G222790	MELO3C019438.2	Melon (DHL92) v3.6.1	cumedB238
Csa3G222790	Cla97C05G091890	Watermelon (97103) v2	cuwmbB215
Csa3G222790	Bhi01G001192	Wax gourd	cuwgoB283
Csa3G222790	CSPI03G19080	Wild cucumber (PI 183967)	cpicuB120
Csa3G222790	Cucsa.032940	Cucumber (Gy14) v1	cgycuB003
Csa3G222790	CmaCh04G005340	Cucurbita maxima (Rimu)	cmacuB697
Csa3G222790	CmoCh16G004200	Cucurbita moschata (Rifu)	cmocuB307
Csa3G222790	CmoCh04G005700	Cucurbita moschata (Rifu)	cmocuB687
Csa3G222790	Cp4.1LG01g01870	Cucurbita pepo (Zucchini)	cpecuB389
Csa3G222790	CsGy3G018990	Cucumber (Gy14) v2	cgybcuB109
Csa3G222790	Carg13204	Silver-seed gourd	carcuB0043
Csa3G222790	Carg11316	Silver-seed gourd	carcuB0675

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G222790	Cucurbita maxima (Rimu)	cmacuB320
Csa3G222790	Cucurbita pepo (Zucchini)	cpecuB205