CmaCh10G003330 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGAGGGGAAGGCATAATCCTTGCATCCCAAGTAACCCATGACCGACCACCTAGCATTCCACTTCTATATTAGAGCTTTCAAATTTCATTTAGAAATCTGTCTCAACGCTCTTTCAAGTTTAGCAGTGTTCTTTTTGGATTACCCATCAAGAAGAACCCTTTCATCAGTGCACAGAGAAGAAACCACCACAAGCAGCCCCAACAATGGTGTCCCTCACCCTACAGAAGCGGCTTGCTGCCAGTAGTCTCGACTGTGGCAAGCGCCGAGTATGGCTCGATCCCAACGAGACCTGCAACATCTCCTTAGCCAATTCTAGTAAGTACAACAACTTTCCAAGAACTATCATCTGGTTTTTTTCTTCCTGTTGAACTTGATCAGTCATGAAGTTTGCTTATGAGTGCACAACCATGTTTAAGAGGAGAGGAGAGAAGAAAAGAAAAGGTTTGGCAAACATGAATAATTGATTCTACCACATACAGATTTAACAAAAGAGTGAACAATGAATTCTTTTGTTTCAGGAAAGAATTTTGTACCTGATATTAACAATTTAAAAACATTTTAACTAGAAAACACTTGAAACTGTCAGGAATGAGCATCAGAAAGCTCATAAAGGATGGCTTGATCATCAAGAGGACGACAACAATCCACTCGAAGTTTCGATCTCGACAAAGCCGCGAAGCAAAATCAAGAGGACGACATTCTGGGTATGGAAAACGAAGAGGAACAAAGGAAGCAAGGTTACCCACAAAGCTGCTATGGATGAGAAGAATGAGGATCCTCCGAAGATTACTGCGCAAATACAGAGAATGTGAGAAGATAGATAAGCATATTTATCATGAAATGTATACTAGAGTGAAGGGAAACGTCTACAAAAACAAGCGTGTGCTGATGGAAAACATTCACAAGGTCAAGTCCGAAAAAGCATCAGAAAGAACACTTTCTGCACAGGTCGAGGCCAAGAGAGCAAGAAACAGTAAAGCTACAGTAAGCGTTGTAAAGCAGAAAGATTACACTGCCACTACAGGCTCTGGCAGCGACAAAATTCACACATTCAGGGAATGTCTTTCTTATGGAGTGGAAGCTTCATAAAACAGTTGATTAGAACATAAGTGCATAATTGTCCTTTTATTTTTGCAAGATCATATGTATTTGTCTATTTGTATATTTGTCACCAGTTCTATATTGTAATGTTTGTTATTTAGGCTACTTTTTATTTTTCATAGCATGCCAGAATTTGAATAAGTATTGTAGAGGAAAAAAAATAAGTTACAAGTTAAATGGAAGTTGTGCATAACCATTTATTAACTATATGCTTTACAGTATGTAGCTTGATTGTCAGTTCAAATAGAGGGAAGAAAGCATCATACTGCAACTCATAATGCTTTTCC CGAGGGGAAGGCATAATCCTTGCATCCCAAGTAACCCATGACCGACCACCTAGCATTCCACTTCTATATTAGAGCTTTCAAATTTCATTTAGAAATCTGTCTCAACGCTCTTTCAAGTTTAGCAGTGTTCTTTTTGGATTACCCATCAAGAAGAACCCTTTCATCAGTGCACAGAGAAGAAACCACCACAAGCAGCCCCAACAATGGTGTCCCTCACCCTACAGAAGCGGCTTGCTGCCAGTAGTCTCGACTGTGGCAAGCGCCGAGTATGGCTCGATCCCAACGAGACCTGCAACATCTCCTTAGCCAATTCTAGAATGAGCATCAGAAAGCTCATAAAGGATGGCTTGATCATCAAGAGGACGACAACAATCCACTCGAAGTTTCGATCTCGACAAAGCCGCGAAGCAAAATCAAGAGGACGACATTCTGGGTATGGAAAACGAAGAGGAACAAAGGAAGCAAGGTTACCCACAAAGCTGCTATGGATGAGAAGAATGAGGATCCTCCGAAGATTACTGCGCAAATACAGAGAATGTGAGAAGATAGATAAGCATATTTATCATGAAATGTATACTAGAGTGAAGGGAAACGTCTACAAAAACAAGCGTGTGCTGATGGAAAACATTCACAAGGTCAAGTCCGAAAAAGCATCAGAAAGAACACTTTCTGCACAGGTCGAGGCCAAGAGAGCAAGAAACAGTAAAGCTACAGTAAGCGTTGTAAAGCAGAAAGATTACACTGCCACTACAGGCTCTGGCAGCGACAAAATTCACACATTCAGGGAATGTCTTTCTTATGGAGTGGAAGCTTCATAAAACAGTTGATTAGAACATAAGTGCATAATTGTCCTTTTATTTTTGCAAGATCATATGTATTTGTCTATTTGTATATTTGTCACCAGTTCTATATTGTAATGTTTGTTATTTAGGCTACTTTTTATTTTTCATAGCATGCCAGAATTTGAATAAGTATTGTAGAGGAAAAAAAATAAGTTACAAGTTAAATGGAAGTTGTGCATAACCATTTATTAACTATATGCTTTACAGTATGTAGCTTGATTGTCAGTTCAAATAGAGGGAAGAAAGCATCATACTGCAACTCATAATGCTTTTCC ATGGTGTCCCTCACCCTACAGAAGCGGCTTGCTGCCAGTAGTCTCGACTGTGGCAAGCGCCGAGTATGGCTCGATCCCAACGAGACCTGCAACATCTCCTTAGCCAATTCTAGAATGAGCATCAGAAAGCTCATAAAGGATGGCTTGATCATCAAGAGGACGACAACAATCCACTCGAAGTTTCGATCTCGACAAAGCCGCGAAGCAAAATCAAGAGGACGACATTCTGGGTATGGAAAACGAAGAGGAACAAAGGAAGCAAGGTTACCCACAAAGCTGCTATGGATGAGAAGAATGAGGATCCTCCGAAGATTACTGCGCAAATACAGAGAATGTGAGAAGATAGATAAGCATATTTATCATGAAATGTATACTAGAGTGAAGGGAAACGTCTACAAAAACAAGCGTGTGCTGATGGAAAACATTCACAAGGTCAAGTCCGAAAAAGCATCAGAAAGAACACTTTCTGCACAGGTCGAGGCCAAGAGAGCAAGAAACAGTAAAGCTACAGTAAGCGTTGTAAAGCAGAAAGATTACACTGCCACTACAGGCTCTGGCAGCGACAAAATTCACACATTCAGGGAATGTCTTTCTTATGGAGTGGAAGCTTCATAA MVSLTLQKRLAASSLDCGKRRVWLDPNETCNISLANSRMSIRKLIKDGLIIKRTTTIHSKFRSRQSREAKSRGRHSGYGKRRGTKEARLPTKLLWMRRMRILRRLLRKYRECEKIDKHIYHEMYTRVKGNVYKNKRVLMENIHKVKSEKASERTLSAQVEAKRARNSKATVSVVKQKDYTATTGSGSDKIHTFRECLSYGVEAS
BLAST of CmaCh10G003330 vs. Swiss-Prot
Match: RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana GN=RPL19A PE=2 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 3.4e-61 Identity = 123/188 (65.43%), Postives = 154/188 (81.91%), Query Frame = 1
BLAST of CmaCh10G003330 vs. Swiss-Prot
Match: RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana GN=RPL19C PE=2 SV=3) HSP 1 Score: 235.3 bits (599), Expect = 5.7e-61 Identity = 123/188 (65.43%), Postives = 153/188 (81.38%), Query Frame = 1
BLAST of CmaCh10G003330 vs. Swiss-Prot
Match: RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 7.0e-59 Identity = 118/192 (61.46%), Postives = 152/192 (79.17%), Query Frame = 1
BLAST of CmaCh10G003330 vs. Swiss-Prot
Match: RL19_TETTS (60S ribosomal protein L19 OS=Tetrahymena thermophila (strain SB210) GN=RPL19 PE=1 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.2e-52 Identity = 108/167 (64.67%), Postives = 135/167 (80.84%), Query Frame = 1
BLAST of CmaCh10G003330 vs. Swiss-Prot
Match: RL19_ICTPU (60S ribosomal protein L19 OS=Ictalurus punctatus GN=rpl19 PE=2 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 6.4e-52 Identity = 104/169 (61.54%), Postives = 137/169 (81.07%), Query Frame = 1
BLAST of CmaCh10G003330 vs. TrEMBL
Match: A0A0A0LSW8_CUCSA (Ribosomal protein L19 OS=Cucumis sativus GN=Csa_1G025150 PE=3 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 4.0e-69 Identity = 145/171 (84.80%), Postives = 156/171 (91.23%), Query Frame = 1
BLAST of CmaCh10G003330 vs. TrEMBL
Match: A0A061DYW5_THECC (Ribosomal protein L19 OS=Theobroma cacao GN=TCM_004725 PE=3 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 8.9e-61 Identity = 125/189 (66.14%), Postives = 155/189 (82.01%), Query Frame = 1
BLAST of CmaCh10G003330 vs. TrEMBL
Match: A0A164YYZ1_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018315 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 8.9e-61 Identity = 125/186 (67.20%), Postives = 154/186 (82.80%), Query Frame = 1
BLAST of CmaCh10G003330 vs. TrEMBL
Match: A0A068V9R7_COFCA (Ribosomal protein L19 OS=Coffea canephora GN=GSCOC_T00000698001 PE=3 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.2e-60 Identity = 124/187 (66.31%), Postives = 154/187 (82.35%), Query Frame = 1
BLAST of CmaCh10G003330 vs. TrEMBL
Match: B9SAV9_RICCO (Ribosomal protein L19 OS=Ricinus communis GN=RCOM_1179520 PE=3 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 2.0e-60 Identity = 125/189 (66.14%), Postives = 155/189 (82.01%), Query Frame = 1
BLAST of CmaCh10G003330 vs. TAIR10
Match: AT1G02780.1 (AT1G02780.1 Ribosomal protein L19e family protein) HSP 1 Score: 236.1 bits (601), Expect = 1.9e-62 Identity = 123/188 (65.43%), Postives = 154/188 (81.91%), Query Frame = 1
BLAST of CmaCh10G003330 vs. TAIR10
Match: AT4G02230.1 (AT4G02230.1 Ribosomal protein L19e family protein) HSP 1 Score: 235.3 bits (599), Expect = 3.2e-62 Identity = 123/188 (65.43%), Postives = 153/188 (81.38%), Query Frame = 1
BLAST of CmaCh10G003330 vs. TAIR10
Match: AT3G16780.1 (AT3G16780.1 Ribosomal protein L19e family protein) HSP 1 Score: 228.4 bits (581), Expect = 4.0e-60 Identity = 118/192 (61.46%), Postives = 152/192 (79.17%), Query Frame = 1
BLAST of CmaCh10G003330 vs. TAIR10
Match: AT4G16030.1 (AT4G16030.1 Ribosomal protein L19e family protein) HSP 1 Score: 61.2 bits (147), Expect = 8.4e-10 Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 1
BLAST of CmaCh10G003330 vs. NCBI nr
Match: gi|659107003|ref|XP_008453495.1| (PREDICTED: 60S ribosomal protein L19-3-like [Cucumis melo]) HSP 1 Score: 275.4 bits (703), Expect = 8.0e-71 Identity = 148/171 (86.55%), Postives = 157/171 (91.81%), Query Frame = 1
BLAST of CmaCh10G003330 vs. NCBI nr
Match: gi|449439153|ref|XP_004137352.1| (PREDICTED: 60S ribosomal protein L19-3-like [Cucumis sativus]) HSP 1 Score: 269.2 bits (687), Expect = 5.7e-69 Identity = 145/171 (84.80%), Postives = 156/171 (91.23%), Query Frame = 1
BLAST of CmaCh10G003330 vs. NCBI nr
Match: gi|729454118|ref|XP_010523961.1| (PREDICTED: 60S ribosomal protein L19-3 [Tarenaya hassleriana]) HSP 1 Score: 244.2 bits (622), Expect = 2.0e-61 Identity = 127/192 (66.15%), Postives = 156/192 (81.25%), Query Frame = 1
BLAST of CmaCh10G003330 vs. NCBI nr
Match: gi|729414432|ref|XP_010556721.1| (PREDICTED: 60S ribosomal protein L19-3-like [Tarenaya hassleriana]) HSP 1 Score: 242.3 bits (617), Expect = 7.5e-61 Identity = 125/188 (66.49%), Postives = 154/188 (81.91%), Query Frame = 1
BLAST of CmaCh10G003330 vs. NCBI nr
Match: gi|729355800|ref|XP_010544991.1| (PREDICTED: 60S ribosomal protein L19-1-like [Tarenaya hassleriana]) HSP 1 Score: 241.9 bits (616), Expect = 9.8e-61 Identity = 125/189 (66.14%), Postives = 154/189 (81.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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