CsaV3_1G004430 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G004430
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Ribosomal protein L19
Location	chr1 : 2773948 .. 2778133 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTGAATCAATGAAATATATATATCAATTGCCACACATCATCCTTCCACACTTTAATAAAAGAGAACACTAAAATAAATTAATTACAACTTTACTTTGGCCCCAAGGAAACACTTAAAATTTTCAAGCCCTGTTTGAATGGTCAAAGAAACAAAGGGGGGAATATGGAAGAAACGAAGAAGGCATAATCCTTGCATTCCAAGTAACACAAAACCAAGCAATAGACATTTTACTTTCTATATAAAACCTTTCAAATTTGTTTTCATATAGAAAGCACTTAAGCCAATTAGCTCACCTCAAGCTCTTTCAAGTTTGCATTCTTTTGGTTCAGTGTAGAGAAGAAGCCACCACAAGCAGAACCAGCAATGGTGTCTCTCACCCTACAAAAGCGGCTTGCCGCCAGCAGCCTCAACTGTGGCAAACGTCGAGTATGGCTTGATCCGGACGAGACCACCACCATCTCCTTGGCCAATTCAAGTAAGCACTTCAACTTTATCTAGAATTGTTGCATCTTCTCTTTTCTTTCTCTTCGTGTTAACTTGAAGAGTCATGAAGTTTAGTTGTAAGTACATAACCACTTAAAGAGAACAGTGAGAAAATCAAAAGTAAGGCAGGTTTGATCAGTCATCATTTTGGTGTTTGATGTTGAATATTATTGATTTTAGAAAATTCTAAAAACATTTTAAAATTGCGTTTTCTGTTGAAGTGCTAGATGCATGTTTTGAAATATTTATTATAAACGTTTTCTTACATACATATCAATCATACATATAAAATTTTCATAATAAAAAAATTAGAGAAAAAGTATAGTTATCACAATTATTTAGTTAAATAAGTTCTCAGATAGAAACTTCCATTTGATACTATTTTTGTTTTCAAAAAATAAACCTATAGACAATACTTTCCGTCTCTCTCTTTCTTCCTTTGTTATCTATAATAAATATTACCAAAATATCTTCCTTTGCTATCTATATTAAATATTACCAATTGTTTAAAAAACCAAGCCAAAACTTGATACTAAAAAAAAAAGTAACTTTTTGCTTTTGAAATTTAGCTAGGAATTCAACCACACAAAGAGGATATAGGCTTAGTTTTGAAAAACAAAAACAAATAACGAAATAGTTACAAACTAGACCTTACTGATTCCATAATTCTAAACTCGTTTTTAAAACCAAACATAACAACTCAAGATCATATTTAAATATATAAAAATCACTTTTAAGGGCTTGAAACCAAACATTAATATGATTATATAAAAATCAATAATCTTTTTTCTAAAATCATATTTCAATCATCACTCCCAAAACATACCCTTAGAATAATTGATTCCACTGGATGCAGATTTCACACAAGAGTGGGCAATTAAATCTTTAGTTTCAGAAAAGAATTTTGTACCCCTGATATTAACAATTCAAGTAGCAAAATCTTTTCTAAGAGAACAAGGATATTTTAACTAAAAAGCATATGTAACTATCAGGAATGAGCATCAGAAAGCTCATAAAAGATGGCCTAATCATCAAAAGATTGACAACAACCCACTCAAAATCTCGATCTCGACAACGCCATCAAGCAAAATCAAGAGGACGTCACTCAGGGAATGGAAAACGAAGAGGAACAAAGGAAGCAAGGTTACCTACAAAGCTGCTATGGATGAGAAGAATGAGAGTCCTCCGAAGATTACTGCGAAAGTACAGAGACTATGAGAAGATAGATAGGCATATTTATCATCAAATGTACATCAGAGTGAAGGGAAACGTCTACAAAAACAAGCGTGTTCTAATGGAAAGTATTCACAAAGTCCATGCTGAAAAAGCATTAGAAAAAACACTTTCTATTCAGGTGGAGGCCAAGAGAGCAATAAATAGTAAAGCTATAATAAGATTGTGAAGCAGAAAGATTACTCTACCATTAAGGCTCTGGCTGTGACATAATTCACACATTCAGGGTCTGTCTTCCTCATAGCCATATAGGGGAAGCTCAATAAAACAAATGGTTAGATAAAAACTGTATAATCGTCCATTAATATTTTTCAACTTCATATGTATTTGTATGTTTCACATGAGTTTTATGATGACAAATCTAACAGAGTGAACAGTAATTGGTACCTACAGATATTCAATGATGAGAACCTATGCTTTAAACAGCATTCATGTGCAATGAAAAGGATATAACATCCTATTTAGAACCTCATTTTCAGATATTTGGCCAATAGATGGTTAGCAGGTTTTACAATATGAAAATGGAACAGTGCTTTCTTGATTGTTCCATCCAAGGGAATGTTTTACACGTTACCCAACTGAATGAAGAATAACATCCATTCCAAATGCAAGCTTCCTCATGAAGGACGATCAGAGTTCAAAATACCTTCACTTCGCTGCATAAAAAGGCTACAAGGCAAACCATTATCACATAATGGAATTGGAAACAACCAAAACACATTCTAAAGAAGCCAATAGGACTCCCCAACTTCTAACTGAGGGATAAGGAAGGACATTTCTGATTCCCATCCTCCGGGAGACCTCCCCTTGCCACCCTCTTAATTTCTTTGGTCCGAGCTCTGGTCTGGTAATGGTATTTCCTTCTCCCAGATTTCACAACCCTGCAATGGTGGATGCCTGTGGTTGACAAAATTTGCGCTCAATCATTTCAATTAACCATGAAACGATCAATCATTTTTATTTGGCCATTCTCTAGGCAGTTCAGCATAAAAGTAAAGAAAGAAATGAGGTTCTCAAAGCTCACCCATTATCCTTTCTAGTCGTGATATTCCATATAATGCAAAACAATCACATTACTGTTCTTAAGGTAGAAAATGTTAACAAATAGAGCGAACAGACAATAGATTTCAACAGATTATAGGATCCCATAACATATGCAAACTCATCTATCACAATTAGGCTAGTAATTCTTGGAAAGCATAGTAAATTGGTAGAAACGTCTGAGAATCTAAGGATTATATAAAAGGCAACATTCTGAATACTATAAATATTTCATATATGAAATATTCATAAATGAAATCAATATCTGTATGGGGGATCAACAGTACAGTATATGTACATTTCATAAACCAGATATGACAAACCATGACCATCTAACTTGAGGGCTTTCAACATTCCAGCTGCAAATCAGAACATCATGAGGATCACGGAAGAAAAACAATCAACTGCAGCATTCAAAATTAGACCTGGAAAAAGGAAAAATAAACTTCACATAAACCCAAAAAAGGGTAAAAGATTCTAATTGATAAAATATGGTAACAATAGCAAGTGTAGAGTAGCCCCGCTGGAGCATTGATCAAATTGAGCAAGTGCAAGGATGTCTGGAACACTAACGCAAAGGGTGGCGCACCATAATTGCCATCTGATAGCCACTATTGCAAGGTAATAGCGGAGAGACAATATTGAACATGTGATCTAGGTATATAACATCCCTCGCACCATAGGAAAAGAAAAACAGAACAAAAATCAAAAGAGGCGAACATTGAAATAATATACATATTAATGATATCTTACATCTAGGGCAAAATTCTACAAGATATTAGAAAGCTAAGAAGAAATAGAAATCCTGAGAATACTATGCTCCTGACTCAACTAATAGAATCTTTTGTTTCTCAATTTGAAAATAGAAACAAAGAAAGGGGGAAAATCACATGATACGTGCAATTTCCAGCAACAAAAGGATTCATGAAAACCATGCCGTCAAAGTAAAGATTAAGTTCTCACACTTAAACGACCGAGTATCTGCCTGGTTGTGATCCACCGGGTAGTGACAGTGTTTGGTTTGTAATGTCCTCAAGGACACGTTTTAACTCAGCTTTAGCTCTCTTAACAGATTGTTCAGTAGGACCTTCAATGAACAAGTAAAGCTTGCGCTCTCCAGGTCCAGCAATCTTGCCTGGTGGAAAGAACTGTCCCCTAGTAGTAATAGCAGCTCCAGTCCACTCTGAAATTGGGCCTAAGGTCTCCTTATGGGTTACCTTCCATCGAGCATTCTGTGGGAAATCGTTAATTTCCAATTCAGCTTCATAGTGTTCAGGTATTGCACTAGCTTGAATCTTGGCTAGGTTGTGTTGCAAGTTCATTGCAGCTGCTAGTGCTGCCCTTGCAGCAGCCCCATCATTAGTAACTGTAGGCAATGTTGCACTAGGAATAACTGGCATTGTTCCTGGAATTGTGAGCCCAAGAAC

mRNA sequence

ATGGTGTCTCTCACCCTACAAAAGCGGCTTGCCGCCAGCAGCCTCAACTGTGGCAAACGTCGAGTATGGCTTGATCCGGACGAGACCACCACCATCTCCTTGGCCAATTCAAGAATGAGCATCAGAAAGCTCATAAAAGATGGCCTAATCATCAAAAGATTGACAACAACCCACTCAAAATCTCGATCTCGACAACGCCATCAAGCAAAATCAAGAGGACGTCACTCAGGGAATGGAAAACGAAGAGGAACAAAGGAAGCAAGGTTACCTACAAAGCTGCTATGGATGAGAAGAATGAGAGTCCTCCGAAGATTACTGCGAAAGTACAGAGACTATGAGAAGATAGATAGGCATATTTATCATCAAATGTACATCAGAGTGAAGGGAAACGTCTACAAAAACAAGCGTGTTCTAATGGAAAGTATTCACAAAGTCCATGCTGAAAAAGCATTAGAAAAAACACTTTCTATTCAGGTGGAGGCCAAGAGAGCAATAAATAGTAAAGCTATAATAAGATTGTGA

Coding sequence (CDS)

ATGGTGTCTCTCACCCTACAAAAGCGGCTTGCCGCCAGCAGCCTCAACTGTGGCAAACGTCGAGTATGGCTTGATCCGGACGAGACCACCACCATCTCCTTGGCCAATTCAAGAATGAGCATCAGAAAGCTCATAAAAGATGGCCTAATCATCAAAAGATTGACAACAACCCACTCAAAATCTCGATCTCGACAACGCCATCAAGCAAAATCAAGAGGACGTCACTCAGGGAATGGAAAACGAAGAGGAACAAAGGAAGCAAGGTTACCTACAAAGCTGCTATGGATGAGAAGAATGAGAGTCCTCCGAAGATTACTGCGAAAGTACAGAGACTATGAGAAGATAGATAGGCATATTTATCATCAAATGTACATCAGAGTGAAGGGAAACGTCTACAAAAACAAGCGTGTTCTAATGGAAAGTATTCACAAAGTCCATGCTGAAAAAGCATTAGAAAAAACACTTTCTATTCAGGTGGAGGCCAAGAGAGCAATAAATAGTAAAGCTATAATAAGATTGTGA

Protein sequence

MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSKSRSRQRHQAKSRGRHSGNGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIYHQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAIIRL

Homology

[Close]

BLAST of CsaV3_1G004430 vs. NCBI nr
Match: XP_004137352.1 (PREDICTED: 60S ribosomal protein L19-3-like [Cucumis sativus] >KGN63882.1 hypothetical protein Csa_1G025150 [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 6.4e-73
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK
Sbjct: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY
Sbjct: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAIIRL 174
           HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAIIRL
Sbjct: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAIIRL 173

[Close]

BLAST of CsaV3_1G004430 vs. NCBI nr
Match: XP_008453495.1 (PREDICTED: 60S ribosomal protein L19-3-like [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 3.0e-70
Identity = 169/173 (97.69%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSL+CGKRRVWLDP+ETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY
Sbjct: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAIIRL 174
           HQMYIRVKGNVYKNKRVLMESIHKV  EKALEKTLSIQVEAKRAINSKAIIRL
Sbjct: 121 HQMYIRVKGNVYKNKRVLMESIHKVKTEKALEKTLSIQVEAKRAINSKAIIRL 173

[Close]

BLAST of CsaV3_1G004430 vs. NCBI nr
Match: XP_023515875.1 (60S ribosomal protein L19-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.1 bits (614), Expect = 2.8e-60
Identity = 132/171 (77.19%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSL+CGKRRVWLDP+ET TISLANSRMSIRKLIKDGLIIKR+TT HSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETCTISLANSRMSIRKLIKDGLIIKRMTTIHSK 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
                               RRGTKEARLPTKLLWMRRMRVLRRLLRKYR+ EKID+HIY
Sbjct: 61  FRSRQSHEAKSRGRHSGYGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRECEKIDKHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAII 172
           HQMY RVKGNVYKNKRVLME+IHKV +E A E+TLS QVEAKRA NSKA +
Sbjct: 121 HQMYTRVKGNVYKNKRVLMENIHKVKSEIASERTLSAQVEAKRARNSKATV 171

[Close]

BLAST of CsaV3_1G004430 vs. NCBI nr
Match: XP_022921592.1 (60S ribosomal protein L19-3-like [Cucurbita moschata])

HSP 1 Score: 240.0 bits (611), Expect = 6.2e-60
Identity = 131/171 (76.61%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSL+CGKR+VWLDP+ET TISLANSRMSIRKLIKDG IIKR TT HSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRQVWLDPNETCTISLANSRMSIRKLIKDGFIIKRTTTIHSK 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
                               RRGTKEARLPTKLLWMRRMRVLRRLLRKYR+ EKID+HIY
Sbjct: 61  FRSRQSHEAKSRGRHSGYGKRRGTKEARLPTKLLWMRRMRVLRRLLRKYRECEKIDKHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAII 172
           HQMY RVKGNVYKNKRVLME+IHKV +EKA E+TLS QVEAKRA NSKA +
Sbjct: 121 HQMYTRVKGNVYKNKRVLMENIHKVKSEKASERTLSAQVEAKRARNSKATV 171

[Close]

BLAST of CsaV3_1G004430 vs. NCBI nr
Match: XP_022988450.1 (60S ribosomal protein L19-1-like [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 8.1e-60
Identity = 130/171 (76.02%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSL+CGKRRVWLDP+ET  ISLANSRMSIRKLIKDGLIIKR TT HSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETCNISLANSRMSIRKLIKDGLIIKRTTTIHSK 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
                               RRGTKEARLPTKLLWMRRMR+LRRLLRKYR+ EKID+HIY
Sbjct: 61  FRSRQSREAKSRGRHSGYGKRRGTKEARLPTKLLWMRRMRILRRLLRKYRECEKIDKHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAII 172
           H+MY RVKGNVYKNKRVLME+IHKV +EKA E+TLS QVEAKRA NSKA +
Sbjct: 121 HEMYTRVKGNVYKNKRVLMENIHKVKSEKASERTLSAQVEAKRARNSKATV 171

[Close]

BLAST of CsaV3_1G004430 vs. TAIR10
Match: AT4G02230.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 204.5 bits (519), Expect = 5.2e-53
Identity = 109/166 (65.66%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL LQKRLA+S L CGKR+VWLDP+E + IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           S                   R+GT+EARLPTK+LWMRRMRVLRRLL+KYR+ +KIDRH+Y
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAIN 167
           H MY++VKGNV+KNKRVLMESIHK  AEKA EKTLS Q EAKRA N
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166

[Close]

BLAST of CsaV3_1G004430 vs. TAIR10
Match: AT1G02780.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 203.4 bits (516), Expect = 1.2e-52
Identity = 108/166 (65.06%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL LQKRLAAS + CGK +VWLDP+E++ IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           S                   R+GT+EARLPTK+LWMRRMRVLRRLL+KYR+ +KID+H+Y
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAIN 167
           H MY+RVKGNV+KNKRVLMESIHK  AEKA EKTLS Q EAKRA N
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166

[Close]

BLAST of CsaV3_1G004430 vs. TAIR10
Match: AT3G16780.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 197.2 bits (500), Expect = 8.3e-51
Identity = 104/166 (62.65%), Postives = 126/166 (75.90%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL +QKRLAAS + CGK +VWLDP+E+  IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           S                   R+GT+EARLPTK+LWMRRMRVLRR L KYR+ +KIDRH+Y
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAIN 167
           H MY++VKGNV+KNKRVLMESIHK+ AEKA EKTL+ Q EAKR  N
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKN 166

[Close]

BLAST of CsaV3_1G004430 vs. TAIR10
Match: AT4G16030.1 (Ribosomal protein L19e family protein)

HSP 1 Score: 43.9 bits (102), Expect = 1.2e-04
Identity = 25/59 (42.37%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 113 EKIDRHI-YHQMYIRVKGNVYKNKRVLMESIHKVHAEKAL---EKTLSIQVEAKRAINS 168
           +KID+ + YH M+++VKG VYKNK VLMES+HK   E+     E  L+++ E ++  ++
Sbjct: 54  KKIDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRERKFSGSEMRLALEPEGEKTASA 112

[Close]

BLAST of CsaV3_1G004430 vs. Swiss-Prot
Match: sp|P49693|RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3)

HSP 1 Score: 204.5 bits (519), Expect = 9.4e-52
Identity = 109/166 (65.66%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL LQKRLA+S L CGKR+VWLDP+E + IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           S                   R+GT+EARLPTK+LWMRRMRVLRRLL+KYR+ +KIDRH+Y
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAIN 167
           H MY++VKGNV+KNKRVLMESIHK  AEKA EKTLS Q EAKRA N
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166

[Close]

BLAST of CsaV3_1G004430 vs. Swiss-Prot
Match: sp|Q9SRX2|RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.1e-51
Identity = 108/166 (65.06%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL LQKRLAAS + CGK +VWLDP+E++ IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           S                   R+GT+EARLPTK+LWMRRMRVLRRLL+KYR+ +KID+H+Y
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAIN 167
           H MY+RVKGNV+KNKRVLMESIHK  AEKA EKTLS Q EAKRA N
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166

[Close]

BLAST of CsaV3_1G004430 vs. Swiss-Prot
Match: sp|Q9LUQ6|RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-49
Identity = 104/166 (62.65%), Postives = 126/166 (75.90%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL +QKRLAAS + CGK +VWLDP+E+  IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           S                   R+GT+EARLPTK+LWMRRMRVLRR L KYR+ +KIDRH+Y
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAIN 167
           H MY++VKGNV+KNKRVLMESIHK+ AEKA EKTL+ Q EAKR  N
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKN 166

[Close]

BLAST of CsaV3_1G004430 vs. Swiss-Prot
Match: sp|Q90YU8|RL19_ICTPU (60S ribosomal protein L19 OS=Ictalurus punctatus OX=7998 GN=rpl19 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.5e-45
Identity = 93/164 (56.71%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           M  L LQKRLA+S L CGK++VWLDP+ET  I+ ANSR +IRKL+KDGLIIK+  T HS+
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQAIRKLVKDGLIIKKPVTVHSR 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           +                   R+GT  AR+P KL WMRRMR+LRRLLR+YR+ +KIDRH+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRA 165
           H +Y+R KGNV+KNKR+LME IHK+ A++A +K LS Q EA+R+
Sbjct: 121 HSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQAEARRS 164

[Close]

BLAST of CsaV3_1G004430 vs. Swiss-Prot
Match: sp|Q7ZYS1|RL19_XENLA (60S ribosomal protein L19 OS=Xenopus laevis OX=8355 GN=rpl19 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.9e-44
Identity = 92/164 (56.10%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           M  L LQKRLA+S L CGK++VWLDP+ET  I+ ANSR  IRKL+KDGLII++  T HS+
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIRKPVTVHSR 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           +                   R+GT  AR+P KL WMRRMR+LRRLLR+YR+ +KIDRH+Y
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRA 165
           H +Y++VKGNV+KNKR+LME IHK+ A+KA +K L+ Q EA+R+
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRS 164

[Close]

BLAST of CsaV3_1G004430 vs. TrEMBL
Match: tr|A0A0A0LSW8|A0A0A0LSW8_CUCSA (Ribosomal protein L19 OS=Cucumis sativus OX=3659 GN=Csa_1G025150 PE=3 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.2e-73
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK
Sbjct: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY
Sbjct: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAIIRL 174
           HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAIIRL
Sbjct: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAIIRL 173

[Close]

BLAST of CsaV3_1G004430 vs. TrEMBL
Match: tr|A0A1S3BVU0|A0A1S3BVU0_CUCME (Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103494191 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.0e-70
Identity = 169/173 (97.69%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSLTLQKRLAASSL+CGKRRVWLDP+ETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK
Sbjct: 1   MVSLTLQKRLAASSLDCGKRRVWLDPNETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY
Sbjct: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKAIIRL 174
           HQMYIRVKGNVYKNKRVLMESIHKV  EKALEKTLSIQVEAKRAINSKAIIRL
Sbjct: 121 HQMYIRVKGNVYKNKRVLMESIHKVKTEKALEKTLSIQVEAKRAINSKAIIRL 173

[Close]

BLAST of CsaV3_1G004430 vs. TrEMBL
Match: tr|A0A199UV46|A0A199UV46_ANACO (Ribosomal protein L19 OS=Ananas comosus OX=4615 GN=ACMD2_23633 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 6.5e-50
Identity = 111/169 (65.68%), Postives = 131/169 (77.51%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL LQKRLAAS LNCGK +VWLDP+E + IS+ANSR +IRKL+KDG +IK+    HS+
Sbjct: 1   MVSLKLQKRLAASVLNCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFVIKKPMKIHSR 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           S                   RRGT+EARLPTK+LWMRRMRVLRRLLRKYR+ +KID+H+Y
Sbjct: 61  SRARRAMEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHLY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAINSKA 170
           H++Y++VKGNVYKNKRVLMESIHK  AEKA EKT+S Q EAKRA  SKA
Sbjct: 121 HELYMKVKGNVYKNKRVLMESIHKSKAEKAREKTISDQFEAKRA-KSKA 168

[Close]

BLAST of CsaV3_1G004430 vs. TrEMBL
Match: tr|S8E649|S8E649_9LAMI (Ribosomal protein L19 (Fragment) OS=Genlisea aurea OX=192259 GN=M569_03471 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 8.5e-50
Identity = 110/166 (66.27%), Postives = 128/166 (77.11%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL LQKRLAAS LNCGK +VWLDP+E   IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKLQKRLAASVLNCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           S                   R+GT+EARLPTK+LWMRRMRVLRRLLRKYR+ +KID+H+Y
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAIN 167
           H MY++VKGNV+KNKRVLMESIHK  AEKA EKTLS Q EAKRA N
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166

[Close]

BLAST of CsaV3_1G004430 vs. TrEMBL
Match: tr|R0FC54|R0FC54_9BRAS (Ribosomal protein L19 OS=Capsella rubella OX=81985 GN=CARUB_v10003129mg PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 8.5e-50
Identity = 110/166 (66.27%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 1   MVSLTLQKRLAASSLNCGKRRVWLDPDETTTISLANSRMSIRKLIKDGLIIKRLTTTHSK 60
           MVSL LQKRLAAS L CGKR+VWLDP+E + IS+ANSR +IRKL+KDG II++ T  HS+
Sbjct: 1   MVSLKLQKRLAASVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SXXXXXXXXXXXXXXXXXXXRRGTKEARLPTKLLWMRRMRVLRRLLRKYRDYEKIDRHIY 120
           S                   R+GT+EARLPTK+LWMRRMRVLRRLL+KYR+ +KIDRH+Y
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HQMYIRVKGNVYKNKRVLMESIHKVHAEKALEKTLSIQVEAKRAIN 167
           H MY++VKGNV+KNKRVLMESIHK  AEKA EKTLS Q EAKRA N
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKN 166

The following BLAST results are available for this feature:

BLAST of CsaV3_1G004430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137352.1	6.4e-73	100.00	PREDICTED: 60S ribosomal protein L19-3-like [Cucumis sativus] >KGN63882.1 hypoth...	[more]
XP_008453495.1	3.0e-70	97.69	PREDICTED: 60S ribosomal protein L19-3-like [Cucumis melo]	[more]
XP_023515875.1	2.8e-60	77.19	60S ribosomal protein L19-3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022921592.1	6.2e-60	76.61	60S ribosomal protein L19-3-like [Cucurbita moschata]	[more]
XP_022988450.1	8.1e-60	76.02	60S ribosomal protein L19-1-like [Cucurbita maxima]	[more]

BLAST of CsaV3_1G004430 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02230.1	5.2e-53	65.66	Ribosomal protein L19e family protein	[more]
AT1G02780.1	1.2e-52	65.06	Ribosomal protein L19e family protein	[more]
AT3G16780.1	8.3e-51	62.65	Ribosomal protein L19e family protein	[more]
AT4G16030.1	1.2e-04	42.37	Ribosomal protein L19e family protein	[more]

BLAST of CsaV3_1G004430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P49693\|RL193_ARATH	9.4e-52	65.66	60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3	[more]
sp\|Q9SRX2\|RL191_ARATH	2.1e-51	65.06	60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1	[more]
sp\|Q9LUQ6\|RL192_ARATH	1.5e-49	62.65	60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1	[more]
sp\|Q90YU8\|RL19_ICTPU	6.5e-45	56.71	60S ribosomal protein L19 OS=Ictalurus punctatus OX=7998 GN=rpl19 PE=2 SV=1	[more]
sp\|Q7ZYS1\|RL19_XENLA	1.9e-44	56.10	60S ribosomal protein L19 OS=Xenopus laevis OX=8355 GN=rpl19 PE=2 SV=1	[more]

BLAST of CsaV3_1G004430 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LSW8\|A0A0A0LSW8_CUCSA	4.2e-73	100.00	Ribosomal protein L19 OS=Cucumis sativus OX=3659 GN=Csa_1G025150 PE=3 SV=1	[more]
tr\|A0A1S3BVU0\|A0A1S3BVU0_CUCME	2.0e-70	97.69	Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103494191 PE=3 SV=1	[more]
tr\|A0A199UV46\|A0A199UV46_ANACO	6.5e-50	65.68	Ribosomal protein L19 OS=Ananas comosus OX=4615 GN=ACMD2_23633 PE=3 SV=1	[more]
tr\|S8E649\|S8E649_9LAMI	8.5e-50	66.27	Ribosomal protein L19 (Fragment) OS=Genlisea aurea OX=192259 GN=M569_03471 PE=3 ...	[more]
tr\|R0FC54\|R0FC54_9BRAS	8.5e-50	66.27	Ribosomal protein L19 OS=Capsella rubella OX=81985 GN=CARUB_v10003129mg PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0022625	cytosolic large ribosomal subunit
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR035970	60S_ribosomal_L19/L19e_sf
IPR033935	Ribosomal_L19_euka
IPR023638	Ribosomal_L19/L19e_CS
IPR015972	Ribosomal_L19/L19e_dom1
IPR000196	Ribosomal_L19/L19e

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0042788	polysomal ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G004430.1	CsaV3_1G004430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000196	Ribosomal protein L19/L19e	SMART	SM01416	Ribosomal_L19e_2	coord: 3..146 e-value: 9.7E-81 score: 284.2
IPR000196	Ribosomal protein L19/L19e	PFAM	PF01280	Ribosomal_L19e	coord: 4..144 e-value: 1.7E-59 score: 199.9
None	No IPR available	GENE3D	G3DSA:1.10.1200.240		coord: 57..172 e-value: 2.7E-46 score: 158.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..79
None	No IPR available	PANTHER	PTHR10722	60S RIBOSOMAL PROTEIN L19	coord: 1..167
None	No IPR available	PANTHER	PTHR10722:SF11	60S RIBOSOMAL PROTEIN L19-1-RELATED	coord: 1..167
IPR015972	Ribosomal protein L19/L19e, domain 1	GENE3D	G3DSA:1.10.1650.10		coord: 1..55 e-value: 5.7E-27 score: 95.2
IPR023638	Ribosomal protein L19/L19e conserved site	PROSITE	PS00526	RIBOSOMAL_L19E	coord: 7..26
IPR033935	Ribosomal protein L19, eukaryotic	CDD	cd01417	Ribosomal_L19e_E	coord: 4..166 e-value: 2.90387E-65 score: 198.728
IPR035970	Ribosomal protein L19/L19e superfamily	SUPERFAMILY	SSF48140	Ribosomal protein L19 (L19e)	coord: 3..144

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G004430	CmaCh10G003330	Cucurbita maxima (Rimu)	cmacucB0060
CsaV3_1G004430	CmoCh10G003590	Cucurbita moschata (Rifu)	cmocucB0046
CsaV3_1G004430	Cp4.1LG18g06670	Cucurbita pepo (Zucchini)	cpecucB0444
CsaV3_1G004430	CsGy1G004340	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G004430	Carg15182	Silver-seed gourd	carcucB0824
CsaV3_1G004430	Cla018917	Watermelon (97103) v1	cucwmB106
CsaV3_1G004430	ClCG06G014250	Watermelon (Charleston Gray)	cucwcgB089
CsaV3_1G004430	Lsi06G012730	Bottle gourd (USVL1VR-Ls)	cuclsiB082
CsaV3_1G004430	MELO3C017364.2	Melon (DHL92) v3.6.1	cucmedB051
CsaV3_1G004430	Cla97C06G123710	Watermelon (97103) v2	cucwmbB077
CsaV3_1G004430	Bhi02G000109	Wax gourd	cucwgoB085

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G004430	Silver-seed gourd	carcucB0629
CsaV3_1G004430	Cucumber (Gy14) v1	cgycucB143
CsaV3_1G004430	Cucurbita maxima (Rimu)	cmacucB0101
CsaV3_1G004430	Cucurbita moschata (Rifu)	cmocucB0091
CsaV3_1G004430	Cucurbita pepo (Zucchini)	cpecucB0815
CsaV3_1G004430	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G004430	Melon (DHL92) v3.5.1	cucmeB055