MELO3C024672 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C024672
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial import inner membrane translocase subunit tim23, putative
Location	chr2 : 20045081 .. 20045875 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTCTCTCTCTTTCTCGCCATTGTTTTCTCTCCGTTCAACCTTTGATTCAGCTCACCCTGAACCCTAATTTCTGTTCCTTCAAAACATCCCTTTCTCCTCGTCCCATGGAAAATTCCTCCAAATCACCCGATGATCGGAAAACCCGTTTCTATCATCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATACTACACCGGAATTGGCTACCTCTCCGGCGCCCTTCTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCCGGGCAGCTGAGCCCGGTGACTCTGTCAAACTCCGTCTCAATCGAGTTCTCAACTCTGGGGGCCAGCTTGGCCGGAGGGCTGGAAACTCTCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTTCTGATGATGTTTTGAATAGTATTGTAGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCCGCCATCGCCGGTGCTATTGGAGGGATTGCTGCTGCAGCTGCAGTTGCGGGTAAGCAGGCAGTTAAGAGATATGTGCCGATATAGAATCGGCATAACAAGTTATGCAAATTTGTATCAATTAGAGGGAGGACTTGCACGGTAAAGCATTTGGTTTCTTTGATTATTATTTCTTCATATTGTTACACAGTTAGTTTATTATTCATGGATTAGTGAATAATAC

mRNA sequence

TTTTTCTCTCTCTTTCTCGCCATTGTTTTCTCTCCGTTCAACCTTTGATTCAGCTCACCCTGAACCCTAATTTCTGTTCCTTCAAAACATCCCTTTCTCCTCGTCCCATGGAAAATTCCTCCAAATCACCCGATGATCGGAAAACCCGTTTCTATCATCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATACTACACCGGAATTGGCTACCTCTCCGGCGCCCTTCTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCCGGGCAGCTGAGCCCGGTGACTCTGTCAAACTCCGTCTCAATCGAGTTCTCAACTCTGGGGGCCAGCTTGGCCGGAGGGCTGGAAACTCTCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTTCTGATGATGTTTTGAATAGTATTGTAGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCCGCCATCGCCGGTGCTATTGGAGGGATTGCTGCTGCAGCTGCAGTTGCGGGTAAGCAGGCAGTTAAGAGATATGTGCCGATATAGAATCGGCATAACAAGTTATGCAAATTTGTATCAATTAGAGGGAGGACTTGCACGGTAAAGCATTTGGTTTCTTTGATTATTATTTCTTCATATTGTTACACAGTTAGTTTATTATTCATGGATTAGTGAATAATAC

Coding sequence (CDS)

ATGGAAAATTCCTCCAAATCACCCGATGATCGGAAAACCCGTTTCTATCATCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATACTACACCGGAATTGGCTACCTCTCCGGCGCCCTTCTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCCGGGCAGCTGAGCCCGGTGACTCTGTCAAACTCCGTCTCAATCGAGTTCTCAACTCTGGGGGCCAGCTTGGCCGGAGGGCTGGAAACTCTCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTTCTGATGATGTTTTGAATAGTATTGTAGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCCGCCATCGCCGGTGCTATTGGAGGGATTGCTGCTGCAGCTGCAGTTGCGGGTAAGCAGGCAGTTAAGAGATATGTGCCGATATAG

Protein sequence

MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI*

Homology

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BLAST of MELO3C024672 vs. Swiss-Prot
Match: TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana GN=TIM23-2 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.6e-56
Identity = 108/184 (58.70%), Postives = 133/184 (72.28%), Query Frame = 1


Query: 3   NSSKSPDDRKTRFYHPYQDLHVPITK---LYELPTAPEHLFFEEAARPHRSWGENLQYYT 62
           N S    D  TR Y+PYQ+  VPI K   LY+LPT+PE LF EEA R  RSWGENL +YT
Sbjct: 5   NRSDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYT 64

Query: 63  GIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAG 122
           G  YL G++ G + G I G+++ E GD+ KL++NR+LNS GQ GR  GN +GI+GL++AG
Sbjct: 65  GTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAG 124

Query: 123 LESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 182
           +ESG++     DDV  S+VAGLGTGAV +AA G RSAA+AGA+GG+AA A VAGKQ VKR
Sbjct: 125 IESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKR 184

Query: 183 YVPI 184
           YVPI
Sbjct: 185 YVPI 188

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BLAST of MELO3C024672 vs. Swiss-Prot
Match: TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana GN=TIM23-3 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.5e-55
Identity = 103/184 (55.98%), Postives = 140/184 (76.09%), Query Frame = 1


Query: 1   MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60
           M +S+     +K R Y+PYQ +++P  KLYELPT+PE LF EEA +   +WGENL ++TG
Sbjct: 5   MNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTG 64

Query: 61  IGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 120
            GY +G++LG  +G+I G+RAAE G+S+K+R NR+LNSGG + RR GN LG +GL+FA +
Sbjct: 65  WGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAM 124

Query: 121 ESGVIHLR-GSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 180
           ESGV ++R G D  L +++AGL TG +Y+AASGPRSA +AGA+GG+AA AAVAG++ VKR
Sbjct: 125 ESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKR 184

Query: 181 YVPI 184
           +VPI
Sbjct: 185 FVPI 188

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BLAST of MELO3C024672 vs. Swiss-Prot
Match: TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana GN=TIM23-1 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.3e-55
Identity = 106/185 (57.30%), Postives = 132/185 (71.35%), Query Frame = 1


Query: 1   MENSSKSPDDRKTRFYHPYQDLHVPITK--LYELPTAPEHLFFEEAARPHRSWGENLQYY 60
           +  SS    D  TR YHPYQ+  VPI    LY+LPT+PE LF EE+ +  RSWGENL +Y
Sbjct: 3   INRSSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFY 62

Query: 61  TGIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFA 120
           TG GYL+G++ G + G   G+++ E GD+ KL++NR+LNS GQ GR  GN +GI+GLI+A
Sbjct: 63  TGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYA 122

Query: 121 GLESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVK 180
           G+ESGV+ +   DDV  S+VAGLGTGAV++AA G RSAA+AGA GGIAA A VAGKQ  K
Sbjct: 123 GIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFK 182

Query: 181 RYVPI 184
           RY  I
Sbjct: 183 RYAHI 187

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BLAST of MELO3C024672 vs. Swiss-Prot
Match: TIM23_SCHPO (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tim23 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.9e-19
Identity = 58/160 (36.25%), Postives = 83/160 (51.88%), Query Frame = 1


Query: 17  HPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIGYLSGALLGGARGSI 76
           HP  DL  P+  L     A   L  +  A P R W ++L Y TG  YLSG  +GG  G  
Sbjct: 45  HPLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSYLSGLAIGGLWGLN 104

Query: 77  QGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLESGVIHLRGSDDVLNS 136
           +G++  +   S +LRLN +LN   + G   GNSLG+L L++ G+ S + + R      NS
Sbjct: 105 EGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINSLIGYKRQKHGWENS 164

Query: 137 IVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQA 177
           + AG  TGA+YK+  G R+ AI+ ++   AA      K++
Sbjct: 165 VAAGALTGALYKSTRGLRAMAISSSLVATAAGIWTLAKRS 204

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BLAST of MELO3C024672 vs. Swiss-Prot
Match: TI17B_HUMAN (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens GN=TIMM17B PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.9e-08
Identity = 42/127 (33.07%), Postives = 61/127 (48.03%), Query Frame = 1


Query: 42  EEAARPHRSWGENLQYYTGIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQ 101
           EE AR    W   +    G  +  G + GG   +I+G R A  G  ++ RL    N+   
Sbjct: 2   EEYAREPCPW--RIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVG--IRHRLRGSANAVRI 61

Query: 102 LGRRAGNSLGILGLIFAGLESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGA 161
              + G S  + G +F+ ++ G++ LRG +D  NSI +G  TGAV  A SGP +   +  
Sbjct: 62  RAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAM 121

Query: 162 IGGIAAA 169
           +GGI  A
Sbjct: 122 MGGILLA 124

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BLAST of MELO3C024672 vs. TrEMBL
Match: A0A0A0M0I6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690355 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 9.1e-97
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 1


Query: 1   MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60
           MENSSKSPDDRK+RFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG
Sbjct: 1   MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 61  IGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 120
           IGYLSGAL GGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL
Sbjct: 61  IGYLSGALFGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 120

Query: 121 ESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRY 180
           ESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRY
Sbjct: 121 ESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRY 180

Query: 181 VPI 184
           VPI
Sbjct: 181 VPI 183

[Close]

BLAST of MELO3C024672 vs. TrEMBL
Match: A0A059D310_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01693 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.0e-76
Identity = 143/181 (79.01%), Postives = 164/181 (90.61%), Query Frame = 1


Query: 4   SSKSPDD-RKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIG 63
           SS  P++ RKTR Y+PYQDLHVPI  LY+LPT+PE+LF EE  +PHRSWGE LQYYTG G
Sbjct: 7   SSGDPEEGRKTRPYNPYQDLHVPIKNLYDLPTSPEYLFHEETLKPHRSWGETLQYYTGSG 66

Query: 64  YLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLES 123
           YL+GAL GGARG++ GLR+AEPGDS+KLR+NRVLNSGGQ GRR GNSLGI+GLIFAGLES
Sbjct: 67  YLAGALAGGARGTLDGLRSAEPGDSLKLRVNRVLNSGGQTGRRLGNSLGIVGLIFAGLES 126

Query: 124 GVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVP 183
           G++H RG+DD+LNS+ AGLGTGA+YKAA+GPRSAAIAGAIGGIAAAAAVAGKQAVKRYVP
Sbjct: 127 GLVHWRGTDDLLNSVAAGLGTGALYKAAAGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVP 186

[Close]

BLAST of MELO3C024672 vs. TrEMBL
Match: A0A0L9VJC2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g097000 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 4.4e-75
Identity = 138/182 (75.82%), Postives = 160/182 (87.91%), Query Frame = 1


Query: 2   ENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGI 61
           ++SS S D   TR YHPY+DL+VPI KLY LPTAPEHLF EEAAR HRSWG+NLQYYTG 
Sbjct: 3   DSSSNSKDKNNTRLYHPYKDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGT 62

Query: 62  GYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLE 121
            YLSGA++G  RG++QGLR AE GDS+K+RLNRVLNSGG  GR+ GNSLG+LGLIFAGLE
Sbjct: 63  AYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLE 122

Query: 122 SGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 181
           SG+IH RG+DD++NS VAGLGTGA+Y+AA+GPRSAAIAGAIGGIAAAAAV GKQA+KRY+
Sbjct: 123 SGMIHARGTDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYI 182

Query: 182 PI 184
           PI
Sbjct: 183 PI 184

[Close]

BLAST of MELO3C024672 vs. TrEMBL
Match: A0A0S3SQ47_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G163400 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 4.4e-75
Identity = 138/182 (75.82%), Postives = 160/182 (87.91%), Query Frame = 1


Query: 2   ENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGI 61
           ++SS S D   TR YHPY+DL+VPI KLY LPTAPEHLF EEAAR HRSWG+NLQYYTG 
Sbjct: 3   DSSSNSKDKNNTRLYHPYKDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGT 62

Query: 62  GYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLE 121
            YLSGA++G  RG++QGLR AE GDS+K+RLNRVLNSGG  GR+ GNSLG+LGLIFAGLE
Sbjct: 63  AYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLE 122

Query: 122 SGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 181
           SG+IH RG+DD++NS VAGLGTGA+Y+AA+GPRSAAIAGAIGGIAAAAAV GKQA+KRY+
Sbjct: 123 SGMIHARGTDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYI 182

Query: 182 PI 184
           PI
Sbjct: 183 PI 184

[Close]

BLAST of MELO3C024672 vs. TrEMBL
Match: I1NIP2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G223900 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 9.8e-75
Identity = 140/182 (76.92%), Postives = 161/182 (88.46%), Query Frame = 1


Query: 2   ENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGI 61
           ++SS S D   TR YHPYQDL+VPI KLY LPTAPEHLF EEAAR HRSWG+NLQYYTG 
Sbjct: 3   DSSSNSKDHHNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGS 62

Query: 62  GYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLE 121
           GYL+GA+ G ARG++QGLR AE  DS+K+RLNRVLNSGG  GRR GNSLG++GLIFAGLE
Sbjct: 63  GYLAGAITGAARGTVQGLREAESADSLKIRLNRVLNSGGLAGRRLGNSLGVVGLIFAGLE 122

Query: 122 SGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 181
           SG+ HLRG+DD++NS VAGLGTGA+Y+AA+GP+SAAIAGAIGGIAAAAAVAGKQA+KRYV
Sbjct: 123 SGMTHLRGTDDLVNSAVAGLGTGALYRAAAGPQSAAIAGAIGGIAAAAAVAGKQALKRYV 182

Query: 182 PI 184
           PI
Sbjct: 183 PI 184

[Close]

BLAST of MELO3C024672 vs. TAIR10
Match: AT1G72750.1 (AT1G72750.1 translocase inner membrane subunit 23-2)

HSP 1 Score: 218.4 bits (555), Expect = 3.7e-57
Identity = 108/184 (58.70%), Postives = 133/184 (72.28%), Query Frame = 1


Query: 3   NSSKSPDDRKTRFYHPYQDLHVPITK---LYELPTAPEHLFFEEAARPHRSWGENLQYYT 62
           N S    D  TR Y+PYQ+  VPI K   LY+LPT+PE LF EEA R  RSWGENL +YT
Sbjct: 5   NRSDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYT 64

Query: 63  GIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAG 122
           G  YL G++ G + G I G+++ E GD+ KL++NR+LNS GQ GR  GN +GI+GL++AG
Sbjct: 65  GTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAG 124

Query: 123 LESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 182
           +ESG++     DDV  S+VAGLGTGAV +AA G RSAA+AGA+GG+AA A VAGKQ VKR
Sbjct: 125 IESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKR 184

Query: 183 YVPI 184
           YVPI
Sbjct: 185 YVPI 188

[Close]

BLAST of MELO3C024672 vs. TAIR10
Match: AT3G04800.1 (AT3G04800.1 translocase inner membrane subunit 23-3)

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-56
Identity = 103/184 (55.98%), Postives = 140/184 (76.09%), Query Frame = 1


Query: 1   MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60
           M +S+     +K R Y+PYQ +++P  KLYELPT+PE LF EEA +   +WGENL ++TG
Sbjct: 5   MNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTG 64

Query: 61  IGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 120
            GY +G++LG  +G+I G+RAAE G+S+K+R NR+LNSGG + RR GN LG +GL+FA +
Sbjct: 65  WGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAM 124

Query: 121 ESGVIHLR-GSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 180
           ESGV ++R G D  L +++AGL TG +Y+AASGPRSA +AGA+GG+AA AAVAG++ VKR
Sbjct: 125 ESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKR 184

Query: 181 YVPI 184
           +VPI
Sbjct: 185 FVPI 188

[Close]

BLAST of MELO3C024672 vs. TAIR10
Match: AT1G17530.1 (AT1G17530.1 translocase of inner mitochondrial membrane 23)

HSP 1 Score: 216.1 bits (549), Expect = 1.8e-56
Identity = 106/185 (57.30%), Postives = 132/185 (71.35%), Query Frame = 1


Query: 1   MENSSKSPDDRKTRFYHPYQDLHVPITK--LYELPTAPEHLFFEEAARPHRSWGENLQYY 60
           +  SS    D  TR YHPYQ+  VPI    LY+LPT+PE LF EE+ +  RSWGENL +Y
Sbjct: 3   INRSSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFY 62

Query: 61  TGIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFA 120
           TG GYL+G++ G + G   G+++ E GD+ KL++NR+LNS GQ GR  GN +GI+GLI+A
Sbjct: 63  TGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYA 122

Query: 121 GLESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVK 180
           G+ESGV+ +   DDV  S+VAGLGTGAV++AA G RSAA+AGA GGIAA A VAGKQ  K
Sbjct: 123 GIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFK 182

Query: 181 RYVPI 184
           RY  I
Sbjct: 183 RYAHI 187

[Close]

BLAST of MELO3C024672 vs. NCBI nr
Match: gi|659125510|ref|XP_008462719.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucumis melo])

HSP 1 Score: 364.0 bits (933), Expect = 1.5e-97
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1


Query: 1   MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60
           MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG
Sbjct: 1   MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 61  IGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 120
           IGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL
Sbjct: 61  IGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 120

Query: 121 ESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRY 180
           ESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRY
Sbjct: 121 ESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRY 180

Query: 181 VPI 184
           VPI
Sbjct: 181 VPI 183

[Close]

BLAST of MELO3C024672 vs. NCBI nr
Match: gi|449449545|ref|XP_004142525.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucumis sativus])

HSP 1 Score: 360.9 bits (925), Expect = 1.3e-96
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 1


Query: 1   MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60
           MENSSKSPDDRK+RFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG
Sbjct: 1   MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 61  IGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 120
           IGYLSGAL GGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL
Sbjct: 61  IGYLSGALFGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 120

Query: 121 ESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRY 180
           ESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRY
Sbjct: 121 ESGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRY 180

Query: 181 VPI 184
           VPI
Sbjct: 181 VPI 183

[Close]

BLAST of MELO3C024672 vs. NCBI nr
Match: gi|702269720|ref|XP_010043240.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1 [Eucalyptus grandis])

HSP 1 Score: 296.6 bits (758), Expect = 3.0e-77
Identity = 145/181 (80.11%), Postives = 166/181 (91.71%), Query Frame = 1


Query: 4   SSKSPDD-RKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIG 63
           SS  P++ RKTR Y+PYQDLHVPI  LY+LPT+PE+LF EEA +PHRSWGENLQYYTG G
Sbjct: 7   SSGDPEEVRKTRPYNPYQDLHVPIKNLYDLPTSPEYLFHEEALKPHRSWGENLQYYTGSG 66

Query: 64  YLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLES 123
           YL+GAL GGARG++ GLR+AEPGDS+KLR+NRVLNSGGQ GRR GNSLGI+GLIFAGLES
Sbjct: 67  YLAGALAGGARGTLDGLRSAEPGDSLKLRVNRVLNSGGQAGRRLGNSLGIVGLIFAGLES 126

Query: 124 GVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVP 183
           G++H RG+DD+LNS+ AGLGTGA+YKAA+GPRSAAIAGAIGGIAAAAAVAGKQAVKRYVP
Sbjct: 127 GLVHWRGTDDLLNSVAAGLGTGALYKAAAGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVP 186

[Close]

BLAST of MELO3C024672 vs. NCBI nr
Match: gi|702265961|ref|XP_010041376.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1-like [Eucalyptus grandis])

HSP 1 Score: 292.7 bits (748), Expect = 4.4e-76
Identity = 143/181 (79.01%), Postives = 164/181 (90.61%), Query Frame = 1


Query: 4   SSKSPDD-RKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIG 63
           SS  P++ RKTR Y+PYQDLHVPI  LY+LPT+PE+LF EE  +PHRSWGE LQYYTG G
Sbjct: 7   SSGDPEEGRKTRPYNPYQDLHVPIKNLYDLPTSPEYLFHEETLKPHRSWGETLQYYTGSG 66

Query: 64  YLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLES 123
           YL+GAL GGARG++ GLR+AEPGDS+KLR+NRVLNSGGQ GRR GNSLGI+GLIFAGLES
Sbjct: 67  YLAGALAGGARGTLDGLRSAEPGDSLKLRVNRVLNSGGQTGRRLGNSLGIVGLIFAGLES 126

Query: 124 GVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVP 183
           G++H RG+DD+LNS+ AGLGTGA+YKAA+GPRSAAIAGAIGGIAAAAAVAGKQAVKRYVP
Sbjct: 127 GLVHWRGTDDLLNSVAAGLGTGALYKAAAGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVP 186

[Close]

BLAST of MELO3C024672 vs. NCBI nr
Match: gi|920714990|gb|KOM55078.1| (hypothetical protein LR48_Vigan10g097000 [Vigna angularis])

HSP 1 Score: 288.9 bits (738), Expect = 6.3e-75
Identity = 138/182 (75.82%), Postives = 160/182 (87.91%), Query Frame = 1


Query: 2   ENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGI 61
           ++SS S D   TR YHPY+DL+VPI KLY LPTAPEHLF EEAAR HRSWG+NLQYYTG 
Sbjct: 3   DSSSNSKDKNNTRLYHPYKDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGT 62

Query: 62  GYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLE 121
            YLSGA++G  RG++QGLR AE GDS+K+RLNRVLNSGG  GR+ GNSLG+LGLIFAGLE
Sbjct: 63  AYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLE 122

Query: 122 SGVIHLRGSDDVLNSIVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 181
           SG+IH RG+DD++NS VAGLGTGA+Y+AA+GPRSAAIAGAIGGIAAAAAV GKQA+KRY+
Sbjct: 123 SGMIHARGTDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYI 182

Query: 182 PI 184
           PI
Sbjct: 183 PI 184

The following BLAST results are available for this feature:

BLAST of MELO3C024672 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TI232_ARATH	6.6e-56	58.70	Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis t...	[more]
TI233_ARATH	2.5e-55	55.98	Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis t...	[more]
TI231_ARATH	3.3e-55	57.30	Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis t...	[more]
TIM23_SCHPO	2.9e-19	36.25	Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharom...	[more]
TI17B_HUMAN	3.9e-08	33.07	Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens ...	[more]

BLAST of MELO3C024672 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0I6_CUCSA	9.1e-97	98.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690355 PE=4 SV=1	[more]
A0A059D310_EUCGR	3.0e-76	79.01	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01693 PE=4 SV=1	[more]
A0A0L9VJC2_PHAAN	4.4e-75	75.82	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g097000 PE=4 SV=1	[more]
A0A0S3SQ47_PHAAN	4.4e-75	75.82	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G163400 PE=...	[more]
I1NIP2_SOYBN	9.8e-75	76.92	Uncharacterized protein OS=Glycine max GN=GLYMA_20G223900 PE=4 SV=1	[more]

BLAST of MELO3C024672 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G72750.1	3.7e-57	58.70	translocase inner membrane subunit 23-2	[more]
AT3G04800.1	1.4e-56	55.98	translocase inner membrane subunit 23-3	[more]
AT1G17530.1	1.8e-56	57.30	translocase of inner mitochondrial membrane 23	[more]

BLAST of MELO3C024672 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125510\|ref\|XP_008462719.1\|	1.5e-97	100.00	PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucu...	[more]
gi\|449449545\|ref\|XP_004142525.1\|	1.3e-96	98.91	PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucu...	[more]
gi\|702269720\|ref\|XP_010043240.1\|	3.0e-77	80.11	PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1 [Euca...	[more]
gi\|702265961\|ref\|XP_010041376.1\|	4.4e-76	79.01	PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1-like ...	[more]
gi\|920714990\|gb\|KOM55078.1\|	6.3e-75	75.82	hypothetical protein LR48_Vigan10g097000 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003397	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016114	terpenoid biosynthetic process
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0005744	mitochondrial inner membrane presequence translocase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0015266	protein channel activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU53290	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C024672T1	MELO3C024672T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU53290	MU53290	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003397	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24	PFAM	PF02466	Tim17	coord: 57..165 score: 1.1
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 1..183 score: 1.7E
None	No IPR available	PANTHER	PTHR15371:SF7	SUBFAMILY NOT NAMED	coord: 1..183 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C024672	Cla003747	Watermelon (97103) v1	mewmB290
MELO3C024672	ClCG06G009180	Watermelon (Charleston Gray)	mewcgB259
MELO3C024672	Cla97C06G118950	Watermelon (97103) v2	mewmbB266
MELO3C024672	Bhi02G001024	Wax gourd	mewgoB310
MELO3C024672	CSPI01G33690	Wild cucumber (PI 183967)	cpimeB045
MELO3C024672	Cucsa.291760	Cucumber (Gy14) v1	cgymeB484
MELO3C024672	CmaCh10G010080	Cucurbita maxima (Rimu)	cmameB071
MELO3C024672	CmaCh11G009860	Cucurbita maxima (Rimu)	cmameB109
MELO3C024672	CmoCh11G010050	Cucurbita moschata (Rifu)	cmomeB102
MELO3C024672	CmoCh10G010630	Cucurbita moschata (Rifu)	cmomeB064
MELO3C024672	Lsi06G008030	Bottle gourd (USVL1VR-Ls)	lsimeB401
MELO3C024672	Cp4.1LG04g01900	Cucurbita pepo (Zucchini)	cpemeB617
MELO3C024672	Cp4.1LG05g08470	Cucurbita pepo (Zucchini)	cpemeB686
MELO3C024672	CsGy1G032290	Cucumber (Gy14) v2	cgybmeB041
MELO3C024672	Carg16484	Silver-seed gourd	carmeB0896
MELO3C024672	Carg06121	Silver-seed gourd	carmeB0020
MELO3C024672	CsaV3_1G045620	Cucumber (Chinese Long) v3	cucmeB045

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C024672	Watermelon (97103) v2	mewmbB263
MELO3C024672	Cucurbita maxima (Rimu)	cmameB061
MELO3C024672	Cucurbita moschata (Rifu)	cmomeB052
MELO3C024672	Cucumber (Chinese Long) v2	cumeB045
MELO3C024672	Watermelon (Charleston Gray)	mewcgB256
MELO3C024672	Cucurbita pepo (Zucchini)	cpemeB337
MELO3C024672	Bottle gourd (USVL1VR-Ls)	lsimeB405
MELO3C024672	Silver-seed gourd	carmeB0132