CsaV3_1G045620 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G045620
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionMitochondrial import inner membrane translocase subunit TIM23-like protein
Locationchr1 : 31442901 .. 31443451 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATTCCTCCAAATCACCCGATGATCGGAAATCCCGCTTCTATCACCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATATTACACCGGAATTGGCTACCTCTCCGGCGCCCTTTTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCAGGGCAGCTGAGCCTGGTGACTCTGTCAAACTCCGTCTCAATCGAGTTCTCAACTCTGGGGGCCAGCTTGGCCGGAGGGCTGGAAACTCTCTTGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTTCTGATGATGTTTTAAACAGTATTGTAGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCTGCCATCGCCGGTGCTATTGGAGGAATTGCTGCTGCAGCTGCAGTTGCGGGTAAGCAGGCAGTTAAGAGATATGTGCCGATATAG

mRNA sequence

ATGGAAAATTCCTCCAAATCACCCGATGATCGGAAATCCCGCTTCTATCACCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATATTACACCGGAATTGGCTACCTCTCCGGCGCCCTTTTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCAGGGCAGCTGAGCCTGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCTGCCATCGCCGGTGCTATTGGAGGAATTGCTGCTGCAGCTGCAGTTGCGGGTAAGCAGGCAGTTAAGAGATATGTGCCGATATAG

Coding sequence (CDS)

ATGGAAAATTCCTCCAAATCACCCGATGATCGGAAATCCCGCTTCTATCACCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATATTACACCGGAATTGGCTACCTCTCCGGCGCCCTTTTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCAGGGCAGCTGAGCCTGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCTGCCATCGCCGGTGCTATTGGAGGAATTGCTGCTGCAGCTGCAGTTGCGGGTAAGCAGGCAGTTAAGAGATATGTGCCGATATAG

Protein sequence

MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIGYLSGALFGGARGSIQGLRAAEPAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI
Homology
[Close]
BLAST of CsaV3_1G045620 vs. NCBI nr
Match: XP_022988221.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita maxima])

HSP 1 Score: 210.7 bits (535), Expect = 3.0e-51
Identity = 124/184 (67.39%), Postives = 127/184 (69.02%), Query Frame = 0 

Query: 1   MENSSKSPDDRK-SRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT 60
           ME+SSKS DDRK +RFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT
Sbjct: 1   MEDSSKSGDDRKNTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT 60

Query: 61  GIGYLSGALFGGARGSIQGLRAAEP----------------------------------- 120
           GIGYLSGAL GGARGSIQGLRAAEP                                   
Sbjct: 61  GIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAG 120

Query: 121 -------------------AGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 130
                              AGLGTGA+YKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR
Sbjct: 121 LESGVIHLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 180

[Close]
BLAST of CsaV3_1G045620 vs. NCBI nr
Match: XP_022961272.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita moschata] >XP_023534786.1 mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.8 bits (530), Expect = 1.1e-50
Identity = 123/184 (66.85%), Postives = 126/184 (68.48%), Query Frame = 0 

Query: 1   MENSSKSPDDRK-SRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT 60
           ME+SS S DDRK +RFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT
Sbjct: 1   MEDSSNSGDDRKNTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT 60

Query: 61  GIGYLSGALFGGARGSIQGLRAAEP----------------------------------- 120
           GIGYLSGAL GGARGSIQGLRAAEP                                   
Sbjct: 61  GIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAG 120

Query: 121 -------------------AGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 130
                              AGLGTGA+YKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR
Sbjct: 121 LESGVIHLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 180

[Close]
BLAST of CsaV3_1G045620 vs. NCBI nr
Match: XP_023531226.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.5 bits (454), Expect = 7.4e-42
Identity = 105/183 (57.38%), Postives = 111/183 (60.66%), Query Frame = 0 

Query: 1   MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60
           ME+S +S  DRK+RFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG
Sbjct: 1   MEDSPQSAGDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 61  IGYLSGALFGGARGSIQGLRAAEP------------------------------------ 120
           IGYLSGALFGGARGS+QG+RAAEP                                    
Sbjct: 61  IGYLSGALFGGARGSLQGIRAAEPGDTMKLRLNRVLNSGGQVGRRAGNSLGILGLIFAGL 120

Query: 121 ------------------AGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRY 130
                             AGLGTGA+YKAASGPRSAAIA              KQA KRY
Sbjct: 121 ESGVTHLRGSDDVLNSIVAGLGTGAIYKAASGPRSAAIAXXXXXXXXXXXXXXKQAAKRY 180

[Close]
BLAST of CsaV3_1G045620 vs. NCBI nr
Match: XP_004142525.1 (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucumis sativus] >KGN66799.1 hypothetical protein Csa_1G690355 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 2.8e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60
          MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG
Sbjct: 1  MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 61 IGYLSGALFGGARGSIQGLRAAEP 85
          IGYLSGALFGGARGSIQGLRAAEP
Sbjct: 61 IGYLSGALFGGARGSIQGLRAAEP 84

[Close]
BLAST of CsaV3_1G045620 vs. NCBI nr
Match: PON87118.1 (Mitochondrial inner membrane translocase subunit [Trema orientalis])

HSP 1 Score: 176.4 bits (446), Expect = 6.3e-41
Identity = 101/182 (55.49%), Postives = 116/182 (63.74%), Query Frame = 0 

Query: 2   ENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGI 61
           ++S+ + D++K R Y+PYQDL VPI  LY LPTAPEHLF EEA++PHRSWGENLQYYTG 
Sbjct: 3   DSSNHNHDEQKGRLYNPYQDLQVPIRNLYNLPTAPEHLFIEEASKPHRSWGENLQYYTGC 62

Query: 62  GYLSGALFGGARGSIQGLRAAEP------------------------------------- 121
           GYLSGA+ GGA+GS +GL+AAEP                                     
Sbjct: 63  GYLSGAIIGGAKGSFEGLKAAEPGDTLKLRINRVLNSGGHVGRRYGNSLGVLGLIFAGLE 122

Query: 122 -----------------AGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 130
                            AGLGTGA+YKAA+GPRSAAIAGAIGGIAAAAAVAGKQAVKRYV
Sbjct: 123 SGVIQLRGHDDLLNTVVAGLGTGALYKAAAGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 182

[Close]
BLAST of CsaV3_1G045620 vs. TAIR10
Match: AT3G04800.1 (translocase inner membrane subunit 23-3)

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-27
Identity = 73/184 (39.67%), Postives = 99/184 (53.80%), Query Frame = 0 

Query: 1   MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60
           M +S+     +K R Y+PYQ +++P  KLYELPT+PE LF EEA +   +WGENL ++TG
Sbjct: 5   MNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTG 64

Query: 61  IGYLSGALFGGARGSIQGLRAAEP------------------------------------ 120
            GY +G++ G  +G+I G+RAAE                                     
Sbjct: 65  WGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAM 124

Query: 121 -------------------AGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 130
                              AGL TG +Y+AASGPRSA +AGA+GG+AA AAVAG++ VKR
Sbjct: 125 ESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKR 184

[Close]
BLAST of CsaV3_1G045620 vs. TAIR10
Match: AT1G72750.1 (translocase inner membrane subunit 23-2)

HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26
Identity = 78/184 (42.39%), Postives = 94/184 (51.09%), Query Frame = 0 

Query: 3   NSSKSPDDRKSRFYHPYQDLHVPITK---LYELPTAPEHLFFEEAARPHRSWGENLQYYT 62
           N S    D  +R Y+PYQ+  VPI K   LY+LPT+PE LF EEA R  RSWGENL +YT
Sbjct: 5   NRSDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYT 64

Query: 63  GIGYLSGALFGGARGSIQGLRAAEP----------------------------------- 122
           G  YL G++ G + G I G+++ E                                    
Sbjct: 65  GTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAG 124

Query: 123 -------------------AGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 130
                              AGLGTGAV +AA G RSAA+AGA+GG+AA A VAGKQ VKR
Sbjct: 125 IESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKR 184

[Close]
BLAST of CsaV3_1G045620 vs. TAIR10
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23)

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25
Identity = 74/185 (40.00%), Postives = 92/185 (49.73%), Query Frame = 0 

Query: 1   MENSSKSPDDRKSRFYHPYQDLHVPITK--LYELPTAPEHLFFEEAARPHRSWGENLQYY 60
           +  SS    D  +R YHPYQ+  VPI    LY+LPT+PE LF EE+ +  RSWGENL +Y
Sbjct: 3   INRSSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFY 62

Query: 61  TGIGYLSGALFGGARGSIQGLRAAE----------------------------------- 120
           TG GYL+G++ G + G   G+++ E                                   
Sbjct: 63  TGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYA 122

Query: 121 -------------------PAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVK 130
                               AGLGTGAV++AA G RSAA+AGA GGIAA A VAGKQ  K
Sbjct: 123 GIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFK 182

[Close]
BLAST of CsaV3_1G045620 vs. Swiss-Prot
Match: sp|Q9S837|TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana OX=3702 GN=TIM23-3 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-26
Identity = 73/184 (39.67%), Postives = 99/184 (53.80%), Query Frame = 0 

Query: 1   MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60
           M +S+     +K R Y+PYQ +++P  KLYELPT+PE LF EEA +   +WGENL ++TG
Sbjct: 5   MNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTG 64

Query: 61  IGYLSGALFGGARGSIQGLRAAEP------------------------------------ 120
            GY +G++ G  +G+I G+RAAE                                     
Sbjct: 65  WGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAM 124

Query: 121 -------------------AGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 130
                              AGL TG +Y+AASGPRSA +AGA+GG+AA AAVAG++ VKR
Sbjct: 125 ESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKR 184

[Close]
BLAST of CsaV3_1G045620 vs. Swiss-Prot
Match: sp|Q38820|TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana OX=3702 GN=TIM23-2 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-25
Identity = 78/184 (42.39%), Postives = 94/184 (51.09%), Query Frame = 0 

Query: 3   NSSKSPDDRKSRFYHPYQDLHVPITK---LYELPTAPEHLFFEEAARPHRSWGENLQYYT 62
           N S    D  +R Y+PYQ+  VPI K   LY+LPT+PE LF EEA R  RSWGENL +YT
Sbjct: 5   NRSDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYT 64

Query: 63  GIGYLSGALFGGARGSIQGLRAAEP----------------------------------- 122
           G  YL G++ G + G I G+++ E                                    
Sbjct: 65  GTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAG 124

Query: 123 -------------------AGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 130
                              AGLGTGAV +AA G RSAA+AGA+GG+AA A VAGKQ VKR
Sbjct: 125 IESGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKR 184

[Close]
BLAST of CsaV3_1G045620 vs. Swiss-Prot
Match: sp|Q9LNQ1|TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana OX=3702 GN=TIM23-1 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.6e-24
Identity = 74/185 (40.00%), Postives = 92/185 (49.73%), Query Frame = 0 

Query: 1   MENSSKSPDDRKSRFYHPYQDLHVPITK--LYELPTAPEHLFFEEAARPHRSWGENLQYY 60
           +  SS    D  +R YHPYQ+  VPI    LY+LPT+PE LF EE+ +  RSWGENL +Y
Sbjct: 3   INRSSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFY 62

Query: 61  TGIGYLSGALFGGARGSIQGLRAAE----------------------------------- 120
           TG GYL+G++ G + G   G+++ E                                   
Sbjct: 63  TGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYA 122

Query: 121 -------------------PAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVK 130
                               AGLGTGAV++AA G RSAA+AGA GGIAA A VAGKQ  K
Sbjct: 123 GIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFK 182

[Close]
BLAST of CsaV3_1G045620 vs. TrEMBL
Match: tr|A0A0A0M0I6|A0A0A0M0I6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690355 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.9e-41
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60
          MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG
Sbjct: 1  MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 61 IGYLSGALFGGARGSIQGLRAAEP 85
          IGYLSGALFGGARGSIQGLRAAEP
Sbjct: 61 IGYLSGALFGGARGSIQGLRAAEP 84

[Close]
BLAST of CsaV3_1G045620 vs. TrEMBL
Match: tr|A0A2P5ENG4|A0A2P5ENG4_9ROSA (Mitochondrial inner membrane translocase subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_170670 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.1e-41
Identity = 101/182 (55.49%), Postives = 116/182 (63.74%), Query Frame = 0 

Query: 2   ENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGI 61
           ++S+ + D++K R Y+PYQDL VPI  LY LPTAPEHLF EEA++PHRSWGENLQYYTG 
Sbjct: 3   DSSNHNHDEQKGRLYNPYQDLQVPIRNLYNLPTAPEHLFIEEASKPHRSWGENLQYYTGC 62

Query: 62  GYLSGALFGGARGSIQGLRAAEP------------------------------------- 121
           GYLSGA+ GGA+GS +GL+AAEP                                     
Sbjct: 63  GYLSGAIIGGAKGSFEGLKAAEPGDTLKLRINRVLNSGGHVGRRYGNSLGVLGLIFAGLE 122

Query: 122 -----------------AGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 130
                            AGLGTGA+YKAA+GPRSAAIAGAIGGIAAAAAVAGKQAVKRYV
Sbjct: 123 SGVIQLRGHDDLLNTVVAGLGTGALYKAAAGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 182

[Close]
BLAST of CsaV3_1G045620 vs. TrEMBL
Match: tr|A0A2P5DKQ3|A0A2P5DKQ3_PARAD (Mitochondrial inner membrane translocase subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_054200 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40
Identity = 101/182 (55.49%), Postives = 116/182 (63.74%), Query Frame = 0 

Query: 2   ENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGI 61
           ++S+ + D++K R Y+PYQDL VPI  LY LPTAPEHLF EEA++PHRSWGENLQYYTG 
Sbjct: 3   DSSNHNHDEQKVRLYNPYQDLQVPIRNLYNLPTAPEHLFSEEASKPHRSWGENLQYYTGC 62

Query: 62  GYLSGALFGGARGSIQGLRAAEP------------------------------------- 121
           GYLSGA+ GGA+GS +GL+AAEP                                     
Sbjct: 63  GYLSGAIIGGAKGSFEGLKAAEPGDTIKLRINRVLNSGGHVGRRYGNSLGVLGLIFAGLE 122

Query: 122 -----------------AGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 130
                            AGLGTGA+YKAA+GPRSAAIAGAIGGIAAAAAVAGKQAVKRYV
Sbjct: 123 SGVIQLRGHDDLLNTVVAGLGTGALYKAAAGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 182

[Close]
BLAST of CsaV3_1G045620 vs. TrEMBL
Match: tr|A0A1S3CJ69|A0A1S3CJ69_CUCME (mitochondrial import inner membrane translocase subunit TIM23-2 OS=Cucumis melo OX=3656 GN=LOC103501018 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-40
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0 

Query: 1  MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60
          MENSSKSPDDRK+RFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG
Sbjct: 1  MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 61 IGYLSGALFGGARGSIQGLRAAEP 85
          IGYLSGAL GGARGSIQGLRAAEP
Sbjct: 61 IGYLSGALLGGARGSIQGLRAAEP 84

[Close]
BLAST of CsaV3_1G045620 vs. TrEMBL
Match: tr|I1NIP2|I1NIP2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100803835 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.9e-38
Identity = 99/182 (54.40%), Postives = 113/182 (62.09%), Query Frame = 0 

Query: 2   ENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGI 61
           ++SS S D   +R YHPYQDL+VPI KLY LPTAPEHLF EEAAR HRSWG+NLQYYTG 
Sbjct: 3   DSSSNSKDHHNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGS 62

Query: 62  GYLSGALFGGARGSIQGLRAAEP------------------------------------- 121
           GYL+GA+ G ARG++QGLR AE                                      
Sbjct: 63  GYLAGAITGAARGTVQGLREAESADSLKIRLNRVLNSGGLAGRRLGNSLGVVGLIFAGLE 122

Query: 122 -----------------AGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 130
                            AGLGTGA+Y+AA+GP+SAAIAGAIGGIAAAAAVAGKQA+KRYV
Sbjct: 123 SGMTHLRGTDDLVNSAVAGLGTGALYRAAAGPQSAAIAGAIGGIAAAAAVAGKQALKRYV 182

The following BLAST results are available for this feature:
BLAST of CsaV3_1G045620 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022988221.13.0e-5167.39mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita ... [more]
XP_022961272.11.1e-5066.85mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita ... [more]
XP_023531226.17.4e-4257.38mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita ... [more]
XP_004142525.12.8e-41100.00PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucu... [more]
PON87118.16.3e-4155.49Mitochondrial inner membrane translocase subunit [Trema orientalis][more]
BLAST of CsaV3_1G045620 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04800.12.2e-2739.67translocase inner membrane subunit 23-3[more]
AT1G72750.11.8e-2642.39translocase inner membrane subunit 23-2[more]
AT1G17530.12.0e-2540.00translocase of inner mitochondrial membrane 23[more]
BLAST of CsaV3_1G045620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9S837|TI233_ARATH3.9e-2639.67Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis t... [more]
sp|Q38820|TI232_ARATH3.3e-2542.39Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis t... [more]
sp|Q9LNQ1|TI231_ARATH3.6e-2440.00Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis t... [more]
BLAST of CsaV3_1G045620 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M0I6|A0A0A0M0I6_CUCSA1.9e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690355 PE=4 SV=1[more]
tr|A0A2P5ENG4|A0A2P5ENG4_9ROSA4.1e-4155.49Mitochondrial inner membrane translocase subunit OS=Trema orientalis OX=63057 GN... [more]
tr|A0A2P5DKQ3|A0A2P5DKQ3_PARAD1.2e-4055.49Mitochondrial inner membrane translocase subunit OS=Parasponia andersonii OX=347... [more]
tr|A0A1S3CJ69|A0A1S3CJ69_CUCME2.1e-4097.62mitochondrial import inner membrane translocase subunit TIM23-2 OS=Cucumis melo ... [more]
tr|I1NIP2|I1NIP2_SOYBN1.9e-3854.40Uncharacterized protein OS=Glycine max OX=3847 GN=100803835 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016114 terpenoid biosynthetic process
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031305 integral component of mitochondrial inner membrane
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G045620.1CsaV3_1G045620.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15371:SF15MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-1-RELATEDcoord: 85..129
coord: 4..84
NoneNo IPR availablePANTHERPTHR15371TIM23coord: 85..129
coord: 4..84

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G045620CSPI01G33690Wild cucumber (PI 183967)cpicucB000
CsaV3_1G045620Cucsa.291760Cucumber (Gy14) v1cgycucB450
CsaV3_1G045620CmaCh10G010080Cucurbita maxima (Rimu)cmacucB0072
CsaV3_1G045620CmaCh11G009860Cucurbita maxima (Rimu)cmacucB0099
CsaV3_1G045620CmoCh10G010630Cucurbita moschata (Rifu)cmocucB0059
CsaV3_1G045620CmoCh11G010050Cucurbita moschata (Rifu)cmocucB0090
CsaV3_1G045620Cp4.1LG04g01900Cucurbita pepo (Zucchini)cpecucB0799
CsaV3_1G045620Cp4.1LG05g08470Cucurbita pepo (Zucchini)cpecucB0874
CsaV3_1G045620CsGy1G032290Cucumber (Gy14) v2cgybcucB001
CsaV3_1G045620Carg06121Silver-seed gourdcarcucB0016
CsaV3_1G045620Carg16484Silver-seed gourdcarcucB0949
CsaV3_1G045620Cla003747Watermelon (97103) v1cucwmB101
CsaV3_1G045620MELO3C024672Melon (DHL92) v3.5.1cucmeB045
CsaV3_1G045620ClCG06G009180Watermelon (Charleston Gray)cucwcgB091
CsaV3_1G045620Lsi06G008030Bottle gourd (USVL1VR-Ls)cuclsiB068
CsaV3_1G045620MELO3C024672.2Melon (DHL92) v3.6.1cucmedB042
CsaV3_1G045620Cla97C06G118950Watermelon (97103) v2cucwmbB079
CsaV3_1G045620Bhi02G001024Wax gourdcucwgoB112
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_1G045620CsaV3_UNG004050Cucumber (Chinese Long) v3cuccucB043
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G045620Watermelon (Charleston Gray)cucwcgB083
CsaV3_1G045620Watermelon (97103) v2cucwmbB072
CsaV3_1G045620Bottle gourd (USVL1VR-Ls)cuclsiB089