CsaV3_UNG004050 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAATTCCTCCAAATCACCCGATGATCGGAAATCCCGCTTCTATCACCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATATTACACCGGAATTGGCTACCTCTCCGGCGCCCTTTTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCAGGGCAGCTGAGCCTGGTGACTCTGTCAAACTCCGTCTCAATCGAGTTCTCAACTCTGGGGGCCAGCTTGGCCGGAGGGCTGGAAACTCTCTTGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTTCTGATGATGTTTTAAACAGTATTGTAGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCTGCCATCGCCGGTGCTATTGGAGGAATTGCTGCTGCAGCTGCAGTTGCGGGTAAGCAGGCAGTTAAGAGATATGTGCCGATATAG ATGGAAAATTCCTCCAAATCACCCGATGATCGGAAATCCCGCTTCTATCACCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATATTACACCGGAATTGGCTACCTCTCCGGCGCCCTTTTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCAGGGCAGCTGAGCCTGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCTGCCATCGCCGGTGCTATTGGAGGAATTGCTGCTGCAGCTGCAGTTGCGGGTAAGCAGGCAGTTAAGAGATATGTGCCGATATAG ATGGAAAATTCCTCCAAATCACCCGATGATCGGAAATCCCGCTTCTATCACCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATATTACACCGGAATTGGCTACCTCTCCGGCGCCCTTTTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCAGGGCAGCTGAGCCTGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCTGCCATCGCCGGTGCTATTGGAGGAATTGCTGCTGCAGCTGCAGTTGCGGGTAAGCAGGCAGTTAAGAGATATGTGCCGATATAG MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTGIGYLSGALFGGARGSIQGLRAAEPAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI
BLAST of CsaV3_UNG004050 vs. NCBI nr
Match: XP_022988221.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita maxima]) HSP 1 Score: 210.7 bits (535), Expect = 3.0e-51 Identity = 124/184 (67.39%), Postives = 127/184 (69.02%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. NCBI nr
Match: XP_022961272.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita moschata] >XP_023534786.1 mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 208.8 bits (530), Expect = 1.1e-50 Identity = 123/184 (66.85%), Postives = 126/184 (68.48%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. NCBI nr
Match: XP_023531226.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 179.5 bits (454), Expect = 7.4e-42 Identity = 105/183 (57.38%), Postives = 111/183 (60.66%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. NCBI nr
Match: XP_004142525.1 (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucumis sativus] >KGN66799.1 hypothetical protein Csa_1G690355 [Cucumis sativus]) HSP 1 Score: 177.6 bits (449), Expect = 2.8e-41 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. NCBI nr
Match: PON87118.1 (Mitochondrial inner membrane translocase subunit [Trema orientalis]) HSP 1 Score: 176.4 bits (446), Expect = 6.3e-41 Identity = 101/182 (55.49%), Postives = 116/182 (63.74%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. TAIR10
Match: AT3G04800.1 (translocase inner membrane subunit 23-3) HSP 1 Score: 119.0 bits (297), Expect = 2.2e-27 Identity = 73/184 (39.67%), Postives = 99/184 (53.80%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. TAIR10
Match: AT1G72750.1 (translocase inner membrane subunit 23-2) HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26 Identity = 78/184 (42.39%), Postives = 94/184 (51.09%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. TAIR10
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23) HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25 Identity = 74/185 (40.00%), Postives = 92/185 (49.73%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. Swiss-Prot
Match: sp|Q9S837|TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana OX=3702 GN=TIM23-3 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.9e-26 Identity = 73/184 (39.67%), Postives = 99/184 (53.80%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. Swiss-Prot
Match: sp|Q38820|TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana OX=3702 GN=TIM23-2 PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.3e-25 Identity = 78/184 (42.39%), Postives = 94/184 (51.09%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. Swiss-Prot
Match: sp|Q9LNQ1|TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana OX=3702 GN=TIM23-1 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 3.6e-24 Identity = 74/185 (40.00%), Postives = 92/185 (49.73%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. TrEMBL
Match: tr|A0A0A0M0I6|A0A0A0M0I6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690355 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.9e-41 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. TrEMBL
Match: tr|A0A2P5ENG4|A0A2P5ENG4_9ROSA (Mitochondrial inner membrane translocase subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_170670 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 4.1e-41 Identity = 101/182 (55.49%), Postives = 116/182 (63.74%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. TrEMBL
Match: tr|A0A2P5DKQ3|A0A2P5DKQ3_PARAD (Mitochondrial inner membrane translocase subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_054200 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.2e-40 Identity = 101/182 (55.49%), Postives = 116/182 (63.74%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. TrEMBL
Match: tr|A0A1S3CJ69|A0A1S3CJ69_CUCME (mitochondrial import inner membrane translocase subunit TIM23-2 OS=Cucumis melo OX=3656 GN=LOC103501018 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.1e-40 Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of CsaV3_UNG004050 vs. TrEMBL
Match: tr|I1NIP2|I1NIP2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100803835 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.9e-38 Identity = 99/182 (54.40%), Postives = 113/182 (62.09%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |