Cla97C06G118950 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G118950
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	mitochondrial import inner membrane translocase subunit TIM23-2
Location	Cla97Chr06 : 14242000 .. 14242551 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATTCCTCCAAATCAGCCGATGATCGGAAGACCCGTTTCTATCACCCCTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAACTCCCCACCTCTCCCGAGCATCTCTTCTTCGAAGAAGCCGCCAGGCCCCACCGTTCTTGGGGCGAAAACCTCCAGTACTACACCGGAATTGGCTACCTCTCCGGCGCCATTCTCGGCGGCGCCAGGGGCTCTGTCCAGGGCCTCAGGGCGGCCGAGCCCGGCGACTCTGTCAAACTCCGTGTCAATCGAGTTCTCAACGCTGGGGGCCAGCTTGGCCGGAGGGCTGGGAACTCTCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCAATTGAGAGGTACTGATGATGTCTTGAACAGTATTGTCGCCGGATTGGGGACTGGTGCGCTTTATAAAGCGGCTTCCGGGCCAAGATCTGCCGCCATCGCCGGTGCCATTGGAGGGATTGCTGCTGCAGCTGCAGTTGGGGGAAAGCAGGCAGTTAAGAGATATGTGCCAATATAG

mRNA sequence

ATGGAAGATTCCTCCAAATCAGCCGATGATCGGAAGACCCGTTTCTATCACCCCTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAACTCCCCACCTCTCCCGAGCATCTCTTCTTCGAAGAAGCCGCCAGGCCCCACCGTTCTTGGGGCGAAAACCTCCAGTACTACACCGGAATTGGCTACCTCTCCGGCGCCATTCTCGGCGGCGCCAGGGGCTCTGTCCAGGGCCTCAGGGCGGCCGAGCCCGGCGACTCTGTCAAACTCCGTGTCAATCGAGTTCTCAACGCTGGGGGCCAGCTTGGCCGGAGGGCTGGGAACTCTCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCAATTGAGAGGTACTGATGATGTCTTGAACAGTATTGTCGCCGGATTGGGGACTGGTGCGCTTTATAAAGCGGCTTCCGGGCCAAGATCTGCCGCCATCGCCGGTGCCATTGGAGGGATTGCTGCTGCAGCTGCAGTTGGGGGAAAGCAGGCAGTTAAGAGATATGTGCCAATATAG

Coding sequence (CDS)

ATGGAAGATTCCTCCAAATCAGCCGATGATCGGAAGACCCGTTTCTATCACCCCTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAACTCCCCACCTCTCCCGAGCATCTCTTCTTCGAAGAAGCCGCCAGGCCCCACCGTTCTTGGGGCGAAAACCTCCAGTACTACACCGGAATTGGCTACCTCTCCGGCGCCATTCTCGGCGGCGCCAGGGGCTCTGTCCAGGGCCTCAGGGCGGCCGAGCCCGGCGACTCTGTCAAACTCCGTGTCAATCGAGTTCTCAACGCTGGGGGCCAGCTTGGCCGGAGGGCTGGGAACTCTCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCAATTGAGAGGTACTGATGATGTCTTGAACAGTATTGTCGCCGGATTGGGGACTGGTGCGCTTTATAAAGCGGCTTCCGGGCCAAGATCTGCCGCCATCGCCGGTGCCATTGGAGGGATTGCTGCTGCAGCTGCAGTTGGGGGAAAGCAGGCAGTTAAGAGATATGTGCCAATATAG

Protein sequence

MEDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTGIGYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLESGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYVPI

Homology

[Close]

BLAST of Cla97C06G118950 vs. NCBI nr
Match: XP_022988221.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita maxima])

HSP 1 Score: 337.4 bits (864), Expect = 3.0e-89
Identity = 175/184 (95.11%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MEDSSKSADDRK-TRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYT 60
           MEDSSKS DDRK TRFYHPYQDLHVPITKLYELPT+PEHLFFEEAARPHRSWGENLQYYT
Sbjct: 1   MEDSSKSGDDRKNTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT 60

Query: 61  GIGYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAG 120
           GIGYLSGA+LGGARGS+QGLRAAEPGDSVKLR+NRVLN+GGQLGRRAGNSLGILGLIFAG
Sbjct: 61  GIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAG 120

Query: 121 LESGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKR 180
           LESGVI LRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAV GKQAVKR
Sbjct: 121 LESGVIHLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 180

Query: 181 YVPI 184
           YVPI
Sbjct: 181 YVPI 184

[Close]

BLAST of Cla97C06G118950 vs. NCBI nr
Match: XP_022961272.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita moschata] >XP_023534786.1 mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.5 bits (859), Expect = 1.1e-88
Identity = 174/184 (94.57%), Postives = 179/184 (97.28%), Query Frame = 0


Query: 1   MEDSSKSADDRK-TRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYT 60
           MEDSS S DDRK TRFYHPYQDLHVPITKLYELPT+PEHLFFEEAARPHRSWGENLQYYT
Sbjct: 1   MEDSSNSGDDRKNTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT 60

Query: 61  GIGYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAG 120
           GIGYLSGA+LGGARGS+QGLRAAEPGDSVKLR+NRVLN+GGQLGRRAGNSLGILGLIFAG
Sbjct: 61  GIGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAG 120

Query: 121 LESGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKR 180
           LESGVI LRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAV GKQAVKR
Sbjct: 121 LESGVIHLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKR 180

Query: 181 YVPI 184
           YVPI
Sbjct: 181 YVPI 184

[Close]

BLAST of Cla97C06G118950 vs. NCBI nr
Match: XP_023531226.1 (mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.6 bits (758), Expect = 5.8e-77
Identity = 151/183 (82.51%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MEDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTG 60
           MEDS +SA DRKTRFYHPYQDLHVPITKLYELPT+PEHLFFEEAARPHRSWGENLQYYTG
Sbjct: 1   MEDSPQSAGDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 61  IGYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGL 120
           IGYLSGA+ GGARGS+QG+RAAEPGD++KLR+NRVLN+GGQ+GRRAGNSLGILGLIFAGL
Sbjct: 61  IGYLSGALFGGARGSLQGIRAAEPGDTMKLRLNRVLNSGGQVGRRAGNSLGILGLIFAGL 120

Query: 121 ESGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRY 180
           ESGV  LRG+DDVLNSIVAGLGTGA+YKAASGPRSAAIA              KQA KRY
Sbjct: 121 ESGVTHLRGSDDVLNSIVAGLGTGAIYKAASGPRSAAIAXXXXXXXXXXXXXXKQAAKRY 180

Query: 181 VPI 184
           VPI
Sbjct: 181 VPI 183

[Close]

BLAST of Cla97C06G118950 vs. NCBI nr
Match: XP_023002094.1 (mitochondrial import inner membrane translocase subunit TIM23-3-like [Cucurbita maxima])

HSP 1 Score: 293.1 bits (749), Expect = 6.5e-76
Identity = 150/183 (81.97%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MEDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTG 60
           MEDS +SA  RKTRFYHPYQDLHVPITKLYELPT+PEHLFFEEAARPHRSWGENLQYYTG
Sbjct: 1   MEDSPQSAGYRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 61  IGYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGL 120
           IGYLSGA+ GGARGS+QG+RAAEPGD++KLR+NRVLN+GGQ+GRRAGNSLGILGLIFAGL
Sbjct: 61  IGYLSGALFGGARGSLQGIRAAEPGDTMKLRLNRVLNSGGQVGRRAGNSLGILGLIFAGL 120

Query: 121 ESGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRY 180
           ESGV  LRG+DDVLNSIVAGLGTGA+YKAASGPRSAAIA              KQA KRY
Sbjct: 121 ESGVTHLRGSDDVLNSIVAGLGTGAIYKAASGPRSAAIAXXXXXXXXXXXXXXKQAAKRY 180

Query: 181 VPI 184
           VPI
Sbjct: 181 VPI 183

[Close]

BLAST of Cla97C06G118950 vs. NCBI nr
Match: PON73870.1 (Mitochondrial inner membrane translocase subunit [Parasponia andersonii])

HSP 1 Score: 288.1 bits (736), Expect = 2.1e-74
Identity = 143/182 (78.57%), Postives = 166/182 (91.21%), Query Frame = 0


Query: 2   EDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTGI 61
           + S+ + D++K R Y+PYQDL VPI  LY LPT+PEHLF EEA++PHRSWGENLQYYTG 
Sbjct: 3   DSSNHNHDEQKVRLYNPYQDLQVPIRNLYNLPTAPEHLFSEEASKPHRSWGENLQYYTGC 62

Query: 62  GYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLE 121
           GYLSGAI+GGA+GS +GL+AAEPGD++KLR+NRVLN+GG +GRR GNSLG+LGLIFAGLE
Sbjct: 63  GYLSGAIIGGAKGSFEGLKAAEPGDTIKLRINRVLNSGGHVGRRYGNSLGVLGLIFAGLE 122

Query: 122 SGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYV 181
           SGVIQLRG DD+LN++VAGLGTGALYKAA+GPRSAAIAGAIGGIAAAAAV GKQAVKRYV
Sbjct: 123 SGVIQLRGHDDLLNTVVAGLGTGALYKAAAGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 182

Query: 182 PI 184
           PI
Sbjct: 183 PI 184

[Close]

BLAST of Cla97C06G118950 vs. TrEMBL
Match: tr|A0A2P5DKQ3|A0A2P5DKQ3_PARAD (Mitochondrial inner membrane translocase subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_054200 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.4e-74
Identity = 143/182 (78.57%), Postives = 166/182 (91.21%), Query Frame = 0


Query: 2   EDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTGI 61
           + S+ + D++K R Y+PYQDL VPI  LY LPT+PEHLF EEA++PHRSWGENLQYYTG 
Sbjct: 3   DSSNHNHDEQKVRLYNPYQDLQVPIRNLYNLPTAPEHLFSEEASKPHRSWGENLQYYTGC 62

Query: 62  GYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLE 121
           GYLSGAI+GGA+GS +GL+AAEPGD++KLR+NRVLN+GG +GRR GNSLG+LGLIFAGLE
Sbjct: 63  GYLSGAIIGGAKGSFEGLKAAEPGDTIKLRINRVLNSGGHVGRRYGNSLGVLGLIFAGLE 122

Query: 122 SGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYV 181
           SGVIQLRG DD+LN++VAGLGTGALYKAA+GPRSAAIAGAIGGIAAAAAV GKQAVKRYV
Sbjct: 123 SGVIQLRGHDDLLNTVVAGLGTGALYKAAAGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 182

Query: 182 PI 184
           PI
Sbjct: 183 PI 184

[Close]

BLAST of Cla97C06G118950 vs. TrEMBL
Match: tr|A0A2P5ENG4|A0A2P5ENG4_9ROSA (Mitochondrial inner membrane translocase subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_170670 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.3e-74
Identity = 143/182 (78.57%), Postives = 166/182 (91.21%), Query Frame = 0


Query: 2   EDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTGI 61
           + S+ + D++K R Y+PYQDL VPI  LY LPT+PEHLF EEA++PHRSWGENLQYYTG 
Sbjct: 3   DSSNHNHDEQKGRLYNPYQDLQVPIRNLYNLPTAPEHLFIEEASKPHRSWGENLQYYTGC 62

Query: 62  GYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLE 121
           GYLSGAI+GGA+GS +GL+AAEPGD++KLR+NRVLN+GG +GRR GNSLG+LGLIFAGLE
Sbjct: 63  GYLSGAIIGGAKGSFEGLKAAEPGDTLKLRINRVLNSGGHVGRRYGNSLGVLGLIFAGLE 122

Query: 122 SGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYV 181
           SGVIQLRG DD+LN++VAGLGTGALYKAA+GPRSAAIAGAIGGIAAAAAV GKQAVKRYV
Sbjct: 123 SGVIQLRGHDDLLNTVVAGLGTGALYKAAAGPRSAAIAGAIGGIAAAAAVAGKQAVKRYV 182

Query: 182 PI 184
           PI
Sbjct: 183 PI 184

[Close]

BLAST of Cla97C06G118950 vs. TrEMBL
Match: tr|A0A059D310|A0A059D310_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B01693 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 4.9e-72
Identity = 141/180 (78.33%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 4   SSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTGIGY 63
           S    + RKTR Y+PYQDLHVPI  LY+LPTSPE+LF EE  +PHRSWGE LQYYTG GY
Sbjct: 8   SGDPEEGRKTRPYNPYQDLHVPIKNLYDLPTSPEYLFHEETLKPHRSWGETLQYYTGSGY 67

Query: 64  LSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLESG 123
           L+GA+ GGARG++ GLR+AEPGDS+KLRVNRVLN+GGQ GRR GNSLGI+GLIFAGLESG
Sbjct: 68  LAGALAGGARGTLDGLRSAEPGDSLKLRVNRVLNSGGQTGRRLGNSLGIVGLIFAGLESG 127

Query: 124 VIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYVPI 183
           ++  RGTDD+LNS+ AGLGTGALYKAA+GPRSAAIAGAIGGIAAAAAV GKQAVKRYVPI
Sbjct: 128 LVHWRGTDDLLNSVAAGLGTGALYKAAAGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI 187

[Close]

BLAST of Cla97C06G118950 vs. TrEMBL
Match: tr|A0A0L9VJC2|A0A0L9VJC2_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g097000 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.4e-71
Identity = 139/182 (76.37%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 2   EDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTGI 61
           + SS S D   TR YHPY+DL+VPI KLY LPT+PEHLF EEAAR HRSWG+NLQYYTG 
Sbjct: 3   DSSSNSKDKNNTRLYHPYKDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGT 62

Query: 62  GYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLE 121
            YLSGAI+G  RG+VQGLR AE GDS+K+R+NRVLN+GG  GR+ GNSLG+LGLIFAGLE
Sbjct: 63  AYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLE 122

Query: 122 SGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYV 181
           SG+I  RGTDD++NS VAGLGTGALY+AA+GPRSAAIAGAIGGIAAAAAVGGKQA+KRY+
Sbjct: 123 SGMIHARGTDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYI 182

Query: 182 PI 184
           PI
Sbjct: 183 PI 184

[Close]

BLAST of Cla97C06G118950 vs. TrEMBL
Match: tr|A0A0S3SQ47|A0A0S3SQ47_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G163400 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.4e-71
Identity = 139/182 (76.37%), Postives = 159/182 (87.36%), Query Frame = 0


Query: 2   EDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTGI 61
           + SS S D   TR YHPY+DL+VPI KLY LPT+PEHLF EEAAR HRSWG+NLQYYTG 
Sbjct: 3   DSSSNSKDKNNTRLYHPYKDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGT 62

Query: 62  GYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLE 121
            YLSGAI+G  RG+VQGLR AE GDS+K+R+NRVLN+GG  GR+ GNSLG+LGLIFAGLE
Sbjct: 63  AYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLE 122

Query: 122 SGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYV 181
           SG+I  RGTDD++NS VAGLGTGALY+AA+GPRSAAIAGAIGGIAAAAAVGGKQA+KRY+
Sbjct: 123 SGMIHARGTDDLVNSAVAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYI 182

Query: 182 PI 184
           PI
Sbjct: 183 PI 184

[Close]

BLAST of Cla97C06G118950 vs. Swiss-Prot
Match: sp|Q38820|TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana OX=3702 GN=TIM23-2 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.4e-52
Identity = 104/182 (57.14%), Postives = 133/182 (73.08%), Query Frame = 0


Query: 5   SKSADDRKTRFYHPYQDLHVPITK---LYELPTSPEHLFFEEAARPHRSWGENLQYYTGI 64
           S    D  TR Y+PYQ+  VPI K   LY+LPTSPE LF EEA R  RSWGENL +YTG 
Sbjct: 7   SDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGT 66

Query: 65  GYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLE 124
            YL G++ G + G + G+++ E GD+ KL++NR+LN+ GQ GR  GN +GI+GL++AG+E
Sbjct: 67  AYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIE 126

Query: 125 SGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYV 184
           SG++     DDV  S+VAGLGTGA+ +AA G RSAA+AGA+GG+AA A V GKQ VKRYV
Sbjct: 127 SGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKRYV 186

[Close]

BLAST of Cla97C06G118950 vs. Swiss-Prot
Match: sp|Q9S837|TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana OX=3702 GN=TIM23-3 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-51
Identity = 102/184 (55.43%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 1   MEDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTG 60
           M  S+     +K R Y+PYQ +++P  KLYELPTSPE LF EEA +   +WGENL ++TG
Sbjct: 5   MNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTG 64

Query: 61  IGYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGL 120
            GY +G++LG  +G++ G+RAAE G+S+K+R NR+LN+GG + RR GN LG +GL+FA +
Sbjct: 65  WGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAM 124

Query: 121 ESGVIQLR-GTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKR 180
           ESGV  +R G D  L +++AGL TG LY+AASGPRSA +AGA+GG+AA AAV G++ VKR
Sbjct: 125 ESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKR 184

Query: 181 YVPI 184
           +VPI
Sbjct: 185 FVPI 188

[Close]

BLAST of Cla97C06G118950 vs. Swiss-Prot
Match: sp|Q9LNQ1|TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana OX=3702 GN=TIM23-1 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-51
Identity = 104/182 (57.14%), Postives = 132/182 (72.53%), Query Frame = 0


Query: 4   SSKSADDRKTRFYHPYQDLHVPITK--LYELPTSPEHLFFEEAARPHRSWGENLQYYTGI 63
           SS    D  TR YHPYQ+  VPI    LY+LPTSPE LF EE+ +  RSWGENL +YTG 
Sbjct: 6   SSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGT 65

Query: 64  GYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLE 123
           GYL+G++ G + G   G+++ E GD+ KL++NR+LN+ GQ GR  GN +GI+GLI+AG+E
Sbjct: 66  GYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYAGIE 125

Query: 124 SGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYV 183
           SGV+ +   DDV  S+VAGLGTGA+++AA G RSAA+AGA GGIAA A V GKQ  KRY 
Sbjct: 126 SGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFKRYA 185

[Close]

BLAST of Cla97C06G118950 vs. Swiss-Prot
Match: sp|Q9USM7|TIM23_SCHPO (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tim23 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15
Identity = 57/155 (36.77%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 17  HPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTGIGYLSGAILGGARGSV 76
           HP  DL  P+  L     +   L  +  A P R W ++L Y TG  YLSG  +GG  G  
Sbjct: 45  HPLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSYLSGLAIGGLWGLN 104

Query: 77  QGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLESGVIQLRGTDDVLNS 136
           +G++  +   S +LR+N +LN   + G   GNSLG+L L++ G+ S +   R      NS
Sbjct: 105 EGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINSLIGYKRQKHGWENS 164

Query: 137 IVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAV 172
           + AG  TGALYK+  G R+ AI+ ++  +A AA +
Sbjct: 165 VAAGALTGALYKSTRGLRAMAISSSL--VATAAGI 197

[Close]

BLAST of Cla97C06G118950 vs. Swiss-Prot
Match: sp|P32897|TIM23_YEAST (Mitochondrial import inner membrane translocase subunit TIM23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIM23 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.4e-12
Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 47  PHRSWGENLQYYTGIGYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRA 106
           P R W ++L Y TG  YL G  +GG  G +QGL+   P    KL++N VLN   + G   
Sbjct: 89  PSRGWTDDLCYGTGAVYLLGLGIGGFSGMMQGLQNIPPNSPGKLQLNTVLNHITKRGPFL 148

Query: 107 GNSLGILGLIFAGLESGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIA 166
           GN+ GIL L +  + S +  LRG  D   SI AG  TGAL+K++ G +    + A+  +A
Sbjct: 149 GNNAGILALSYNIINSTIDALRGKHDTAGSIGAGALTGALFKSSKGLKPMGYSSAM--VA 208

Query: 167 AAAAV 172
           AA AV
Sbjct: 209 AACAV 211

[Close]

BLAST of Cla97C06G118950 vs. TAIR10
Match: AT1G72750.1 (translocase inner membrane subunit 23-2)

HSP 1 Score: 205.7 bits (522), Expect = 2.5e-53
Identity = 104/182 (57.14%), Postives = 133/182 (73.08%), Query Frame = 0


Query: 5   SKSADDRKTRFYHPYQDLHVPITK---LYELPTSPEHLFFEEAARPHRSWGENLQYYTGI 64
           S    D  TR Y+PYQ+  VPI K   LY+LPTSPE LF EEA R  RSWGENL +YTG 
Sbjct: 7   SDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGT 66

Query: 65  GYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLE 124
            YL G++ G + G + G+++ E GD+ KL++NR+LN+ GQ GR  GN +GI+GL++AG+E
Sbjct: 67  AYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIE 126

Query: 125 SGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYV 184
           SG++     DDV  S+VAGLGTGA+ +AA G RSAA+AGA+GG+AA A V GKQ VKRYV
Sbjct: 127 SGIVAATDRDDVWTSVVAGLGTGAVCRAARGVRSAAVAGALGGLAAGAVVAGKQIVKRYV 186

[Close]

BLAST of Cla97C06G118950 vs. TAIR10
Match: AT3G04800.1 (translocase inner membrane subunit 23-3)

HSP 1 Score: 204.1 bits (518), Expect = 7.2e-53
Identity = 102/184 (55.43%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 1   MEDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTG 60
           M  S+     +K R Y+PYQ +++P  KLYELPTSPE LF EEA +   +WGENL ++TG
Sbjct: 5   MNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFTG 64

Query: 61  IGYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGL 120
            GY +G++LG  +G++ G+RAAE G+S+K+R NR+LN+GG + RR GN LG +GL+FA +
Sbjct: 65  WGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAAM 124

Query: 121 ESGVIQLR-GTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKR 180
           ESGV  +R G D  L +++AGL TG LY+AASGPRSA +AGA+GG+AA AAV G++ VKR
Sbjct: 125 ESGVTYMRDGDDGSLTTVIAGLATGVLYRAASGPRSAVVAGAVGGVAALAAVAGRRIVKR 184

Query: 181 YVPI 184
           +VPI
Sbjct: 185 FVPI 188

[Close]

BLAST of Cla97C06G118950 vs. TAIR10
Match: AT1G17530.1 (translocase of inner mitochondrial membrane 23)

HSP 1 Score: 203.8 bits (517), Expect = 9.4e-53
Identity = 104/182 (57.14%), Postives = 132/182 (72.53%), Query Frame = 0


Query: 4   SSKSADDRKTRFYHPYQDLHVPITK--LYELPTSPEHLFFEEAARPHRSWGENLQYYTGI 63
           SS    D  TR YHPYQ+  VPI    LY+LPTSPE LF EE+ +  RSWGENL +YTG 
Sbjct: 6   SSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGT 65

Query: 64  GYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLE 123
           GYL+G++ G + G   G+++ E GD+ KL++NR+LN+ GQ GR  GN +GI+GLI+AG+E
Sbjct: 66  GYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYAGIE 125

Query: 124 SGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYV 183
           SGV+ +   DDV  S+VAGLGTGA+++AA G RSAA+AGA GGIAA A V GKQ  KRY 
Sbjct: 126 SGVVAVTDKDDVWTSVVAGLGTGAVFRAARGVRSAAVAGAFGGIAAGAVVAGKQVFKRYA 185

The following BLAST results are available for this feature:

BLAST of Cla97C06G118950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988221.1	3.0e-89	95.11	mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita ...	[more]
XP_022961272.1	1.1e-88	94.57	mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita ...	[more]
XP_023531226.1	5.8e-77	82.51	mitochondrial import inner membrane translocase subunit TIM23-2-like [Cucurbita ...	[more]
XP_023002094.1	6.5e-76	81.97	mitochondrial import inner membrane translocase subunit TIM23-3-like [Cucurbita ...	[more]
PON73870.1	2.1e-74	78.57	Mitochondrial inner membrane translocase subunit [Parasponia andersonii]	[more]

BLAST of Cla97C06G118950 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2P5DKQ3\|A0A2P5DKQ3_PARAD	1.4e-74	78.57	Mitochondrial inner membrane translocase subunit OS=Parasponia andersonii OX=347...	[more]
tr\|A0A2P5ENG4\|A0A2P5ENG4_9ROSA	2.3e-74	78.57	Mitochondrial inner membrane translocase subunit OS=Trema orientalis OX=63057 GN...	[more]
tr\|A0A059D310\|A0A059D310_EUCGR	4.9e-72	78.33	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B01693 PE=4 SV...	[more]
tr\|A0A0L9VJC2\|A0A0L9VJC2_PHAAN	2.4e-71	76.37	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan10g097000 PE...	[more]
tr\|A0A0S3SQ47\|A0A0S3SQ47_PHAAN	2.4e-71	76.37	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G...	[more]

BLAST of Cla97C06G118950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q38820\|TI232_ARATH	4.4e-52	57.14	Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis t...	[more]
sp\|Q9S837\|TI233_ARATH	1.3e-51	55.43	Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis t...	[more]
sp\|Q9LNQ1\|TI231_ARATH	1.7e-51	57.14	Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis t...	[more]
sp\|Q9USM7\|TIM23_SCHPO	1.1e-15	36.77	Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharom...	[more]
sp\|P32897\|TIM23_YEAST	3.4e-12	40.80	Mitochondrial import inner membrane translocase subunit TIM23 OS=Saccharomyces c...	[more]

BLAST of Cla97C06G118950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G72750.1	2.5e-53	57.14	translocase inner membrane subunit 23-2	[more]
AT3G04800.1	7.2e-53	55.43	translocase inner membrane subunit 23-3	[more]
AT1G17530.1	9.4e-53	57.14	translocase of inner mitochondrial membrane 23	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016114	terpenoid biosynthetic process
biological_process	GO:0030150	protein import into mitochondrial matrix
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0005744	mitochondrial inner membrane presequence translocase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0015266	protein channel activity
molecular_function	GO:0008320	protein transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G118950.1	Cla97C06G118950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 57..165 e-value: 6.4E-21 score: 74.5
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 4..183
None	No IPR available	PANTHER	PTHR15371:SF15	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-1-RELATED	coord: 4..183

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C06G118950	Cla003747	Watermelon (97103) v1	wmwmbB412
Cla97C06G118950	MELO3C024672	Melon (DHL92) v3.5.1	mewmbB266
Cla97C06G118950	ClCG06G009180	Watermelon (Charleston Gray)	wcgwmbB273
Cla97C06G118950	CSPI01G33690	Wild cucumber (PI 183967)	cpiwmbB083
Cla97C06G118950	CmaCh11G009860	Cucurbita maxima (Rimu)	cmawmbB142
Cla97C06G118950	CmoCh11G010050	Cucurbita moschata (Rifu)	cmowmbB125
Cla97C06G118950	Lsi06G008030	Bottle gourd (USVL1VR-Ls)	lsiwmbB378
Cla97C06G118950	CsGy1G032290	Cucumber (Gy14) v2	cgybwmbB079
Cla97C06G118950	MELO3C024672.2	Melon (DHL92) v3.6.1	medwmbB252
Cla97C06G118950	Carg16484	Silver-seed gourd	carwmbB0958
Cla97C06G118950	CsaV3_1G045620	Cucumber (Chinese Long) v3	cucwmbB079
Cla97C06G118950	Bhi02G001024	Wax gourd	wgowmbB651

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C06G118950	Cucurbita maxima (Rimu)	cmawmbB083
Cla97C06G118950	Cucurbita moschata (Rifu)	cmowmbB072
Cla97C06G118950	Cucumber (Chinese Long) v2	cuwmbB082
Cla97C06G118950	Melon (DHL92) v3.5.1	mewmbB262
Cla97C06G118950	Watermelon (97103) v1	wmwmbB406