MU53290 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU53290
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Mitochondrial import inner membrane translocase subunit tim23, putative
Location	chr2 : 20045210 .. 20045876 (-)
Sequence length	665

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TTTTTCTCTCTCTTTCTCGCCATTGTTTTCTCTCTGTTCAACCTTTGATTCAGCTCACCCTGAACCCTAATTTCTGTTCCTTCAAAACATCCCTTTCTCCTCGTCCCATGGAAAATTCCTCCAAATCACCCGATGATCGGAAAACCCGTTTCTATCATCCTTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAGCTCCCCACCGCCCCCGAGCATCTTTTCTTCGAAGAAGCCGCCAGGCCTCACCGTTCTTGGGGCGAAAACCTCCAATACTACACCGGAATTGGCTACCTCTCCGGCGCCCTTCTTGGCGGCGCCAGGGGTTCCATTCAGGGCCTCCGGGCAGCTGAGCCCGGTGACTCTGTCAAACTCCGTCTCAATCGAGTTCTCAACTCTGGGGGCCAGCTTGGCCGGAGGGCTGGAAACTCTCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCATTTGAGAGGTTCTGATGATGTTTTGAATAGATTGTAGCTGGATTGGGGACTGGTGCTGTTTATAAGGCGGCGTCTGGGCCAAGGTCGGCCGCCATCGCCGGTGCTATTGGAGGGATTGCTGCTGCAGCTGCAGTTGCGGGTAAGCAGGCAGTTAAGAGATATGTGCCGATATAGAATCGGC

Library


Library category	ESTs
Tam Dew mature fruit library	1
melon CM-PEa library	1

Homology

[Close]

BLAST of MU53290 vs. Swiss-Prot
Match: TI233_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis thaliana GN=TIM23-3 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-29
Identity = 63/133 (47.37%), Postives = 84/133 (63.16%), Query Frame = 3


Query: 105 PMENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT 164
           PM +S+     +K R Y+PYQ +++P  KLYELPT+PE LF EEA +   +WGENL ++T
Sbjct: 4   PMNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFT 63

Query: 165 XXXXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAG 224
                             G+RAAE G+S+K+R NR+LNSGG + RR GN LG +GL+FA 
Sbjct: 64  GWGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAA 123

Query: 225 LESGVIHLRGSDD 284
           +ESGV ++R  DD
Sbjct: 124 MESGVTYMRDGDD 136

Query: 285  344
           
Sbjct: 184  136

Query: 345  404
           
Sbjct: 244  136

Query: 405  464
           
Sbjct: 304  136

Query: 465  504
           
Sbjct: 364  136

[Close]

BLAST of MU53290 vs. Swiss-Prot
Match: TI231_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis thaliana GN=TIM23-1 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.8e-29
Identity = 64/135 (47.41%), Postives = 82/135 (60.74%), Query Frame = 3


Query: 108 MENSSKSPDDRKTRFYHPYQDLHVPITK--LYELPTAPEHLFFEEAARPHRSWGENLQYY 167
           +  SS    D  TR YHPYQ+  VPI    LY+LPT+PE LF EE+ +  RSWGENL +Y
Sbjct: 3   INRSSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFY 62

Query: 168 TXXXXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFA 227
           T                  G+++ E GD+ KL++NR+LNS GQ GR  GN +GI+GLI+A
Sbjct: 63  TGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYA 122

Query: 228 GLESGVIHLRGSDDV 287
           G+ESGV+ +   DDV
Sbjct: 123 GIESGVVAVTDKDDV 137

Query: 288  347
           
Sbjct: 183  137

Query: 348  407
           
Sbjct: 243  137

Query: 408  467
           
Sbjct: 303  137

Query: 468  507
           
Sbjct: 363  137

[Close]

BLAST of MU53290 vs. Swiss-Prot
Match: TI232_ARATH (Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis thaliana GN=TIM23-2 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.3e-29
Identity = 64/134 (47.76%), Postives = 81/134 (60.45%), Query Frame = 3


Query: 114 NSSKSPDDRKTRFYHPYQDLHVPITK---LYELPTAPEHLFFEEAARPHRSWGENLQYYT 173
           N S    D  TR Y+PYQ+  VPI K   LY+LPT+PE LF EEA R  RSWGENL +YT
Sbjct: 5   NRSDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYT 64

Query: 174 XXXXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAG 233
                             G+++ E GD+ KL++NR+LNS GQ GR  GN +GI+GL++AG
Sbjct: 65  GTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAG 124

Query: 234 LESGVIHLRGSDDV 293
           +ESG++     DDV
Sbjct: 125 IESGIVAATDRDDV 138

Query: 294  353
           
Sbjct: 185  138

Query: 354  413
           
Sbjct: 245  138

Query: 414  473
           
Sbjct: 305  138

Query: 474  507
           
Sbjct: 365  138

[Close]

BLAST of MU53290 vs. Swiss-Prot
Match: TIM23_SCHPO (Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tim23 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.7e-06
Identity = 33/106 (31.13%), Postives = 46/106 (43.40%), Query Frame = 3


Query: 156 HPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTXXXXXXXXXXXXXXXXX 215
           HP  DL  P+  L     A   L  +  A P R W ++L Y T                 
Sbjct: 45  HPLADLDKPLDYLLIEEDALSTLPGDSMAIPSRGWQDDLCYGTGTSYLSGLAIGGLWGLN 104

Query: 216 QGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLES 275
           +G++  +   S +LRLN +LN   + G   GNSLG+L L++ G+ S
Sbjct: 105 EGMKKTKDITSTRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINS 150

Query: 276  335
           
Sbjct: 165  150

Query: 336  395
           
Sbjct: 225  150

Query: 396  455
           
Sbjct: 285  150

Query: 456  474
           
Sbjct: 345  150

[Close]

BLAST of MU53290 vs. TrEMBL
Match: A0A0A0M0I6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690355 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.1e-59
Identity = 117/137 (85.40%), Postives = 119/137 (86.86%), Query Frame = 3


Query: 108 MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTX 167
           MENSSKSPDDRK+RFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT 
Sbjct: 1   MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 168 XXXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 227
                           QGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL
Sbjct: 61  IGYLSGALFGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 120

Query: 228 ESGVIHLRGSDDVLNRL 287
           ESGVIHLRGSDDVLN +
Sbjct: 121 ESGVIHLRGSDDVLNSI 137

Query: 288  347
           
Sbjct: 181  137

Query: 348  407
           
Sbjct: 241  137

Query: 408  467
           
Sbjct: 301  137

Query: 468  519
           
Sbjct: 361  137

[Close]

BLAST of MU53290 vs. TrEMBL
Match: A0A0A0M0I6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690355 PE=4 SV=1)

HSP 1 Score: 37.0 bits (84), Expect = 3.6e+01
Identity = 22/47 (46.81%), Postives = 22/47 (46.81%), Query Frame = 2


Query: 515 IVAGLGTGAVYKXXXXXXXXXXXXXXXXXXXXXXXXXKQAVKRYVPI 574
           IVAGLGTGAVYK                         KQAVKRYVPI
Sbjct: 137 IVAGLGTGAVYKAASGPRSAAIAGAIGGIAAAAAVAGKQAVKRYVPI 183

Query: 575  634
           
Sbjct: 197  183

Query: 635  656
           
Sbjct: 257  183

HSP 2 Score: 183.3 bits (464), Expect = 3.1e-43
Identity = 90/134 (67.16%), Postives = 101/134 (75.37%), Query Frame = 3


Query: 111 ENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTXX 170
           ++SS S D   TR YHPYQDL+VPI KLY LPTAPEHLF EEAAR HRSWGENLQYYT  
Sbjct: 3   DSSSNSKDKNNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGENLQYYTGT 62

Query: 171 XXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLE 230
                          QGLR AE GDS+K+RLNRVLNSGG  GR+ GNSLG+LGLIFAGLE
Sbjct: 63  AYLSGAVIGAATGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKFGNSLGVLGLIFAGLE 122

Query: 231 SGVIHLRGSDDVLN 290
           SG+IH RG+DD++N
Sbjct: 123 SGMIHARGTDDLVN 136

Query: 291  350
           
Sbjct: 183  136

Query: 351  410
           
Sbjct: 243  136

Query: 411  470
           
Sbjct: 303  136

Query: 471  513
           
Sbjct: 363  136

[Close]

BLAST of MU53290 vs. TrEMBL
Match: V7BIL3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G186600g PE=4 SV=1)

HSP 1 Score: 32.0 bits (71), Expect = 1.2e+03
Identity = 18/46 (39.13%), Postives = 21/46 (45.65%), Query Frame = 2


Query: 518 VAGLGTGAVYKXXXXXXXXXXXXXXXXXXXXXXXXXKQAVKRYVPI 577
           VAGLGTGA+Y+                         KQA+KRYVPI
Sbjct: 139 VAGLGTGALYRGAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYVPI 184

Query: 578  637
           
Sbjct: 199  184

Query: 638  656
           
Sbjct: 259  184

HSP 2 Score: 182.2 bits (461), Expect = 7.0e-43
Identity = 88/134 (65.67%), Postives = 101/134 (75.37%), Query Frame = 3


Query: 111 ENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTXX 170
           ++SS S D   TR YHPY+DL+VPI KLY LPTAPEHLF EEAAR HRSWG+NLQYYT  
Sbjct: 3   DSSSNSKDKNNTRLYHPYKDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGT 62

Query: 171 XXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLE 230
                          QGLR AE GDS+K+RLNRVLNSGG  GR+ GNSLG+LGLIFAGLE
Sbjct: 63  AYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLE 122

Query: 231 SGVIHLRGSDDVLN 290
           SG+IH RG+DD++N
Sbjct: 123 SGMIHARGTDDLVN 136

Query: 291  350
           
Sbjct: 183  136

Query: 351  410
           
Sbjct: 243  136

Query: 411  470
           
Sbjct: 303  136

Query: 471  513
           
Sbjct: 363  136

[Close]

BLAST of MU53290 vs. TrEMBL
Match: A0A0L9VJC2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g097000 PE=4 SV=1)

HSP 1 Score: 31.6 bits (70), Expect = 1.5e+03
Identity = 17/46 (36.96%), Postives = 21/46 (45.65%), Query Frame = 2


Query: 518 VAGLGTGAVYKXXXXXXXXXXXXXXXXXXXXXXXXXKQAVKRYVPI 577
           VAGLGTGA+Y+                         KQA+KRY+PI
Sbjct: 139 VAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYIPI 184

Query: 578  637
           
Sbjct: 199  184

Query: 638  656
           
Sbjct: 259  184

HSP 2 Score: 182.2 bits (461), Expect = 7.0e-43
Identity = 88/134 (65.67%), Postives = 101/134 (75.37%), Query Frame = 3


Query: 111 ENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTXX 170
           ++SS S D   TR YHPY+DL+VPI KLY LPTAPEHLF EEAAR HRSWG+NLQYYT  
Sbjct: 3   DSSSNSKDKNNTRLYHPYKDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGT 62

Query: 171 XXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLE 230
                          QGLR AE GDS+K+RLNRVLNSGG  GR+ GNSLG+LGLIFAGLE
Sbjct: 63  AYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLE 122

Query: 231 SGVIHLRGSDDVLN 290
           SG+IH RG+DD++N
Sbjct: 123 SGMIHARGTDDLVN 136

Query: 291  350
           
Sbjct: 183  136

Query: 351  410
           
Sbjct: 243  136

Query: 411  470
           
Sbjct: 303  136

Query: 471  513
           
Sbjct: 363  136

[Close]

BLAST of MU53290 vs. TrEMBL
Match: A0A0S3SQ47_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G163400 PE=4 SV=1)

HSP 1 Score: 31.6 bits (70), Expect = 1.5e+03
Identity = 17/46 (36.96%), Postives = 21/46 (45.65%), Query Frame = 2


Query: 518 VAGLGTGAVYKXXXXXXXXXXXXXXXXXXXXXXXXXKQAVKRYVPI 577
           VAGLGTGA+Y+                         KQA+KRY+PI
Sbjct: 139 VAGLGTGALYRAAAGPRSAAIAGAIGGIAAAAAVGGKQALKRYIPI 184

Query: 578  637
           
Sbjct: 199  184

Query: 638  656
           
Sbjct: 259  184

HSP 2 Score: 180.3 bits (456), Expect = 2.6e-42
Identity = 88/134 (65.67%), Postives = 101/134 (75.37%), Query Frame = 3


Query: 111 ENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTXX 170
           ++SS S D   TR YHPYQDL+VPI KLY LPTAPEHLF EEAAR HRSWG+NLQYYT  
Sbjct: 3   DSSSNSKDHHNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGDNLQYYTGS 62

Query: 171 XXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLE 230
                          QGLR AE GDS+K+RLNRVLNSGG  GRR GNSLG++GLIFAGLE
Sbjct: 63  GYLAGALIGAARGTVQGLREAESGDSLKIRLNRVLNSGGHAGRRLGNSLGVVGLIFAGLE 122

Query: 231 SGVIHLRGSDDVLN 290
           SG+ +LRG+DD++N
Sbjct: 123 SGMTYLRGTDDLVN 136

Query: 291  350
           
Sbjct: 183  136

Query: 351  410
           
Sbjct: 243  136

Query: 411  470
           
Sbjct: 303  136

Query: 471  513
           
Sbjct: 363  136

[Close]

BLAST of MU53290 vs. TAIR10
Match: AT3G04800.1 (AT3G04800.1 translocase inner membrane subunit 23-3)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30
Identity = 63/133 (47.37%), Postives = 84/133 (63.16%), Query Frame = 3


Query: 105 PMENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT 164
           PM +S+     +K R Y+PYQ +++P  KLYELPT+PE LF EEA +   +WGENL ++T
Sbjct: 4   PMNHSTGHQQQQKYRQYNPYQQVNLPYRKLYELPTSPEFLFEEEATKKRLTWGENLTFFT 63

Query: 165 XXXXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAG 224
                             G+RAAE G+S+K+R NR+LNSGG + RR GN LG +GL+FA 
Sbjct: 64  GWGYCTGSVLGAFKGTIAGMRAAERGESLKIRTNRILNSGGLVARRGGNCLGSVGLMFAA 123

Query: 225 LESGVIHLRGSDD 284
           +ESGV ++R  DD
Sbjct: 124 MESGVTYMRDGDD 136

Query: 285  344
           
Sbjct: 184  136

Query: 345  404
           
Sbjct: 244  136

Query: 405  464
           
Sbjct: 304  136

Query: 465  504
           
Sbjct: 364  136

[Close]

BLAST of MU53290 vs. TAIR10
Match: AT1G17530.1 (AT1G17530.1 translocase of inner mitochondrial membrane 23)

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-30
Identity = 64/135 (47.41%), Postives = 82/135 (60.74%), Query Frame = 3


Query: 108 MENSSKSPDDRKTRFYHPYQDLHVPITK--LYELPTAPEHLFFEEAARPHRSWGENLQYY 167
           +  SS    D  TR YHPYQ+  VPI    LY+LPT+PE LF EE+ +  RSWGENL +Y
Sbjct: 3   INRSSDHESDENTRLYHPYQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFY 62

Query: 168 TXXXXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFA 227
           T                  G+++ E GD+ KL++NR+LNS GQ GR  GN +GI+GLI+A
Sbjct: 63  TGTGYLAGSVAGASAGIFSGIKSFENGDTTKLKINRILNSSGQAGRTWGNRVGIVGLIYA 122

Query: 228 GLESGVIHLRGSDDV 287
           G+ESGV+ +   DDV
Sbjct: 123 GIESGVVAVTDKDDV 137

Query: 288  347
           
Sbjct: 183  137

Query: 348  407
           
Sbjct: 243  137

Query: 408  467
           
Sbjct: 303  137

Query: 468  507
           
Sbjct: 363  137

[Close]

BLAST of MU53290 vs. TAIR10
Match: AT1G72750.1 (AT1G72750.1 translocase inner membrane subunit 23-2)

HSP 1 Score: 129.0 bits (323), Expect = 3.5e-30
Identity = 64/134 (47.76%), Postives = 81/134 (60.45%), Query Frame = 3


Query: 114 NSSKSPDDRKTRFYHPYQDLHVPITK---LYELPTAPEHLFFEEAARPHRSWGENLQYYT 173
           N S    D  TR Y+PYQ+  VPI K   LY+LPT+PE LF EEA R  RSWGENL +YT
Sbjct: 5   NRSDHGSDENTRLYNPYQNYEVPINKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYT 64

Query: 174 XXXXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAG 233
                             G+++ E GD+ KL++NR+LNS GQ GR  GN +GI+GL++AG
Sbjct: 65  GTAYLGGSVAGASVGVITGVKSFESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAG 124

Query: 234 LESGVIHLRGSDDV 293
           +ESG++     DDV
Sbjct: 125 IESGIVAATDRDDV 138

Query: 294  353
           
Sbjct: 185  138

Query: 354  413
           
Sbjct: 245  138

Query: 414  473
           
Sbjct: 305  138

Query: 474  507
           
Sbjct: 365  138

[Close]

BLAST of MU53290 vs. NCBI nr
Match: gi|659125510|ref|XP_008462719.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucumis melo])

HSP 1 Score: 238.0 bits (606), Expect = 1.5e-59
Identity = 118/137 (86.13%), Postives = 119/137 (86.86%), Query Frame = 3


Query: 108 MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTX 167
           MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT 
Sbjct: 1   MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 168 XXXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 227
                           QGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL
Sbjct: 61  IGYLSGALLGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 120

Query: 228 ESGVIHLRGSDDVLNRL 287
           ESGVIHLRGSDDVLN +
Sbjct: 121 ESGVIHLRGSDDVLNSI 137

Query: 288  347
           
Sbjct: 181  137

Query: 348  407
           
Sbjct: 241  137

Query: 408  467
           
Sbjct: 301  137

Query: 468  519
           
Sbjct: 361  137

[Close]

BLAST of MU53290 vs. NCBI nr
Match: gi|449449545|ref|XP_004142525.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 4.5e-59
Identity = 117/137 (85.40%), Postives = 119/137 (86.86%), Query Frame = 3


Query: 108 MENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTX 167
           MENSSKSPDDRK+RFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYT 
Sbjct: 1   MENSSKSPDDRKSRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTG 60

Query: 168 XXXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 227
                           QGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL
Sbjct: 61  IGYLSGALFGGARGSIQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGL 120

Query: 228 ESGVIHLRGSDDVLNRL 287
           ESGVIHLRGSDDVLN +
Sbjct: 121 ESGVIHLRGSDDVLNSI 137

Query: 288  347
           
Sbjct: 181  137

Query: 348  407
           
Sbjct: 241  137

Query: 408  467
           
Sbjct: 301  137

Query: 468  519
           
Sbjct: 361  137

[Close]

BLAST of MU53290 vs. NCBI nr
Match: gi|593688369|ref|XP_007144819.1| (hypothetical protein PHAVU_007G186600g [Phaseolus vulgaris])

HSP 1 Score: 183.3 bits (464), Expect = 4.5e-43
Identity = 90/134 (67.16%), Postives = 101/134 (75.37%), Query Frame = 3


Query: 111 ENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTXX 170
           ++SS S D   TR YHPYQDL+VPI KLY LPTAPEHLF EEAAR HRSWGENLQYYT  
Sbjct: 3   DSSSNSKDKNNTRVYHPYQDLNVPIQKLYNLPTAPEHLFPEEAARTHRSWGENLQYYTGT 62

Query: 171 XXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLE 230
                          QGLR AE GDS+K+RLNRVLNSGG  GR+ GNSLG+LGLIFAGLE
Sbjct: 63  AYLSGAVIGAATGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKFGNSLGVLGLIFAGLE 122

Query: 231 SGVIHLRGSDDVLN 290
           SG+IH RG+DD++N
Sbjct: 123 SGMIHARGTDDLVN 136

Query: 291  350
           
Sbjct: 183  136

Query: 351  410
           
Sbjct: 243  136

Query: 411  470
           
Sbjct: 303  136

Query: 471  513
           
Sbjct: 363  136

[Close]

BLAST of MU53290 vs. NCBI nr
Match: gi|920714990|gb|KOM55078.1| (hypothetical protein LR48_Vigan10g097000 [Vigna angularis])

HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42
Identity = 88/134 (65.67%), Postives = 101/134 (75.37%), Query Frame = 3


Query: 111 ENSSKSPDDRKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTXX 170
           ++SS S D   TR YHPY+DL+VPI KLY LPTAPEHLF EEAAR HRSWG+NLQYYT  
Sbjct: 3   DSSSNSKDKNNTRLYHPYKDLNVPIQKLYNLPTAPEHLFSEEAARTHRSWGDNLQYYTGT 62

Query: 171 XXXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLE 230
                          QGLR AE GDS+K+RLNRVLNSGG  GR+ GNSLG+LGLIFAGLE
Sbjct: 63  AYLSGAIIGATRGTVQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLGVLGLIFAGLE 122

Query: 231 SGVIHLRGSDDVLN 290
           SG+IH RG+DD++N
Sbjct: 123 SGMIHARGTDDLVN 136

Query: 291  350
           
Sbjct: 183  136

Query: 351  410
           
Sbjct: 243  136

Query: 411  470
           
Sbjct: 303  136

Query: 471  513
           
Sbjct: 363  136

[Close]

BLAST of MU53290 vs. NCBI nr
Match: gi|702269720|ref|XP_010043240.1| (PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1 [Eucalyptus grandis])

HSP 1 Score: 181.8 bits (460), Expect = 1.3e-42
Identity = 89/133 (66.92%), Postives = 104/133 (78.20%), Query Frame = 3


Query: 117 SSKSPDD-RKTRFYHPYQDLHVPITKLYELPTAPEHLFFEEAARPHRSWGENLQYYTXXX 176
           SS  P++ RKTR Y+PYQDLHVPI  LY+LPT+PE+LF EEA +PHRSWGENLQYYT   
Sbjct: 7   SSGDPEEVRKTRPYNPYQDLHVPIKNLYDLPTSPEYLFHEEALKPHRSWGENLQYYTGSG 66

Query: 177 XXXXXXXXXXXXXXQGLRAAEPGDSVKLRLNRVLNSGGQLGRRAGNSLGILGLIFAGLES 236
                          GLR+AEPGDS+KLR+NRVLNSGGQ GRR GNSLGI+GLIFAGLES
Sbjct: 67  YLAGALAGGARGTLDGLRSAEPGDSLKLRVNRVLNSGGQAGRRLGNSLGIVGLIFAGLES 126

Query: 237 GVIHLRGSDDVLN 296
           G++H RG+DD+LN
Sbjct: 127 GLVHWRGTDDLLN 139

Query: 297  356
           
Sbjct: 187  139

Query: 357  416
           
Sbjct: 247  139

Query: 417  476
           
Sbjct: 307  139

Query: 477  513
           
Sbjct: 367  139

The following BLAST results are available for this feature:

BLAST of MU53290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TI233_ARATH	2.2e-29	47.37	Mitochondrial import inner membrane translocase subunit TIM23-3 OS=Arabidopsis t...	[more]
TI231_ARATH	4.8e-29	47.41	Mitochondrial import inner membrane translocase subunit TIM23-1 OS=Arabidopsis t...	[more]
TI232_ARATH	6.3e-29	47.76	Mitochondrial import inner membrane translocase subunit TIM23-2 OS=Arabidopsis t...	[more]
TIM23_SCHPO	5.7e-06	31.13	Mitochondrial import inner membrane translocase subunit tim23 OS=Schizosaccharom...	[more]

BLAST of MU53290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0I6_CUCSA	3.1e-59	85.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690355 PE=4 SV=1	[more]
A0A0A0M0I6_CUCSA	3.6e+01	46.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690355 PE=4 SV=1	[more]
V7BIL3_PHAVU	1.2e+03	39.13	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G186600g PE=4 SV=1	[more]
A0A0L9VJC2_PHAAN	1.5e+03	36.96	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g097000 PE=4 SV=1	[more]
A0A0S3SQ47_PHAAN	1.5e+03	36.96	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G163400 PE=...	[more]

BLAST of MU53290 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04800.1	1.2e-30	47.37	translocase inner membrane subunit 23-3	[more]
AT1G17530.1	2.7e-30	47.41	translocase of inner mitochondrial membrane 23	[more]
AT1G72750.1	3.5e-30	47.76	translocase inner membrane subunit 23-2	[more]

BLAST of MU53290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125510\|ref\|XP_008462719.1\|	1.5e-59	86.13	PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucu...	[more]
gi\|449449545\|ref\|XP_004142525.1\|	4.5e-59	85.40	PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Cucu...	[more]
gi\|593688369\|ref\|XP_007144819.1\|	4.5e-43	67.16	hypothetical protein PHAVU_007G186600g [Phaseolus vulgaris]	[more]
gi\|920714990\|gb\|KOM55078.1\|	1.0e-42	65.67	hypothetical protein LR48_Vigan10g097000 [Vigna angularis]	[more]
gi\|702269720\|ref\|XP_010043240.1\|	1.3e-42	66.92	PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1 [Euca...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR003397	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C024672	MELO3C024672	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FR16M19	FR16M19	EST
PEa0017N08	PEa0017N08	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003397	Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24	PFAM	PF02466	Tim17	coord: 57..165 score: 4.4
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 1..183 score: 1.3E
None	No IPR available	PANTHER	PTHR15371:SF7	SUBFAMILY NOT NAMED	coord: 1..183 score: 1.3E