MELO3C019495.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019495.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	cytochrome b-c1 complex subunit 6
Location	chr06 : 11747405 .. 11751580 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGATTTGTCATATTGCAATTTCTCAGCTTCCAAACTAAACCTAATCAGAGTTCCTAGTTTCCTCTCAGATTCGTGTTTCAGCTTTCAAAGGTATGATTTTTTCAGCTCAAGAATTCTTCCCCCGTTTTTAACTCTTTTTTTTTTTTCTATGCTTTTTTTTGTATTCTTGTTCTCACCTTTTCTTTTAGTTTTCGATTTTTATTATCAGATCCGTGTTTAGTTTTCTTCCATTCATCGATCGTGTATGTTTTGTATTTCCCGGTGCTTTTCTTTTCCTTCTATCAATTGGGTTCGTCTGCTCTGAAGTTTTCTAAGAAATCGATGGAGTATTTTTGTTTTTGTTTTACAATATTCATTTCTTTGTTCTACCTCTCAGTAGTAGTTTGTATTTGAGGTTTTTTCCCCTCTTGTTGCATTATATGATCTGATTCTTGTTTCTGATAGCCATTTAACTCCCAATTTTGAAATTGGGGGGGGGGGGGGGTTCCATTTATTTGGAATGGGATCAAGTTTAACGAGTATTGTTATGTGGGAATAAATCGTTGGATTGAAAGCAATTGCTTTCCCTGTGGTGAAAATTGCAAGGTTCTCCATATTTTATAATATCTTCCTTTTTGAATGTTTCATTTCTGAACCTGAAATCTAATCTTACGGCAACGATGGTCTTAAAAGATAGAGTTTAGCTACAGACTGGTTAATTTCAATTTTTTTTAATCTTGTCTCTGCCATTCCTTAAACGAATGCTTGAGTTAAATACATGGACATCTTGAATTTGTGGAAAAAAGTTCATGGTTATTGGGGTCAGCATTTTTGTACAAACTAAAACAATAACCTTTTTCTTTATTCATATTGATGCTTAATTTTAGTTGTTTTTCAGGTTTTCTTGCGTGCTCTTTTGCTCCAAGTCAGTACTATTTGTTAGCGATGTGAGTATCTCCCTTTTTTCCTTTCAGTTTTACCATGTACTATTATCTTTTTGCCTTTTTATTTCTTAGACAATAAACTTTTTTATTGCCTGCTACATTACTATAGATTTGTATCCCTGTAGTCTAGTGTTGTTTTGTTAGCGTTCATATTTTTATTTGGGATTCGTAAATTTCTAAGCCACTATTTCTTCCCTTGTAAGTATATCTCATTGTTGTCCGAAGGGTTATTAAGGTGGACTGTAAGCACATACTTGGGCAAATTTTTCTCTGAATATTGATTTTTTGAGTAACTACCATGACAAGTATCATCTCTCTGTTACGATCTTACTTGAACAAGGTCTGTTCTATAGGTAGCAAATTATGACCTTGAGTTCTAAGGAGATAAGTATCATCTCCCTGTTGCTGAAATTGAAAAGATGAAATATAAAAGCGCCCTTGAATTTTGCACACATTGGGAAGAATCAGTTTGCTGAAGATTTAGTTTCGATGAGACAGTAGATGTCCTAGCATTTAGTGGATGTAGCATTTTGTTTTCTTGGTGATATGATCAACGTGTTTTTGGAGATTATTAAAGTTTAATAATCTGCAGGATAGTTGCATCATTGCATCATGTCTTCTCCGTACCCTGTGTCTTTATCTTTCATAATGTTGAAGATTATTTGTTTTGATGTCAACTTATCTATGTTTCCTTGTTTCTTCATAATATGTAGGGCGGATGAAGAGCCCGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGTACAGGGTGTTTTATTGATCTTTGTTGTGTGGGATTGATGAGTCTTAGTGAAGTTGGATATACTTTTTTCTTCAGTTGTTAGACCTTTATTCATTATTCATTTTTTTTTCATGATTACTCAACTTTAAAAGTCTAGTCTCATGAGTGGGTATGTTTCTATTCTCTTATTTGGTTAGAAATTAATCCTGTCGCTACGCTAGATTGAAGATTTTGCATCTCTCCATGTAAGTGCGCCCATTATAAATGAGTAGATTTCCTTGTAGCTTCGAACTTTTTTTTTTTTGTGACAGAACAGGCAGCCACTGGCTCACCAAATGACTGAACCTTATAGGTCTTTCTGGAAAATAACGAAGCCTATTTACAGGAGTGAGTTTGATATTAGGTACTTTCTGACAAGACTTGGGCTTGGGCTTGTCATGGTGAATACCAAAATACCATCCTTCAAAAGCAGGGAACAGATGGTTAGCGGGTAAGGAGAGAAAAAAAAAGGAAAAGAAGTTAGAATTGGATTTGGCTCCACCTTTTTTTTCTGAATTTCCTTTTGGAAAAAACCAATTGACGTCACCTGGTCCTGATCCCGATCAATCGCGCTGCGCCTCTGGGATAAAAGTTCTTCTTATGCTGTATAGTGTTTGGATCATTATTTGGATATGTTGGGCATATTGATGATTTAACTAATAAGTGATCATAAGTAAATGATCTTCATTATAAAACAAACAGAATGAAGCCGCTCAAATGCTAAGTAGCATCATTTAAATTCTCATTCTTTTAGTAATTTCAACAGCATATTTCATCATTCTGTTTCAATTCTGGGCTCTATCTTGCCATAAAAGTAACAGGAAGAAAGTTGCTAGTGCAACCAGTTTCATGCTTTTGGATGAGAATCATTTTCGCCTGACAAGCTTATTTTTGGTCTCCTTATGTTGGGTTCTTTTTGTATGCTCTTGTATATTCTTTGTTAAGAAGCCTAGTTTTTCTTCAAAAGTTACTGCGACCTGCAATTATGGTGAAAGATCCTTGCTTATCATGGGAATCATTTAGGTCATGGAGGCAGCAATAGCCTTCCTTAACAAATTGTCTTAGCTCCCTTTTGTGTTTCAAATCATTATTAACGACAAAATATCTTTTTGCCAAAACTTTAGACATCTTATGTTTCACTGATTCTATTTGATACTGTGCTTTGGGGCTCCCGTTGACTTGGTCATTCGACATCCTTTTATTGTGAGGTTGATAAATCTTAAAACATGCATTGGACTTCTTTTTCCTAGGATGCTAGACCTCACCAAATTTGGAGAATTGTTTATTTTGACCTTCACATATGACCTGTTTCCCCTAGTTTTTATGTTTTCCTCTAGATTTTGATTTTGAAGACCTCTTGTAATTACTCTACATGTTCAATTTTGTGTAACTGGAGTTCTTTTAGTTGAGCTCCTCATTCCTTTTTCCAATTAGAGTTGAGCTCCCAACCTATGGTTGACCTGGTGGTAAAAAAGTAAAGTCTCTCAATAACTAACTAAGAGATTATAGGTTGTCCTAGTGGAGACAATCTCAATCATCATAGGTTAATCCAGTGGTTCAATCCATGGTGGTCACTTACCTAGAAATTAATTTCCTACGAGTTTCCTTGATACTCAAATGATGTAGGGTCAAGCAGGTTGTCCCATGAGATTAGTTGAGGTGGTCCGGAAAGGAAAAGAAAAATAAAAAAATAGAGTTGAGCTCCCCAAAATGATGTATTTTTCCTGAGAATTGGCAAAATTTATTTAGTCTCTCATATGAGTTTCGGATGATGACTCGTTGCTAATTTAGGAATGATGGAGGGTCCTAATATTTTAGTTTGTTAACCATGTCTGAGCAGATTCAAATTCTATCAATAGTATAAAGATAGGGTAAAATTGATGGTTATTGTCTTTCCATGTCATAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTAAGTAACTTTGGGTTTTGTTAGAAACTAAATCGTAGAAAAAGTTGTACGCATAAACAAGTTAATTTTTTTTAAAAAAACTGAAATAACCTTGAACTAACTTGGAAGACACTTTTTTCTTGCAGGTTGCACCAAAACTATTTACGAAACTAAAGTAATGGGAGAGAGTTGTTAGGGATGTGGGGATCCTATCCTTTTGCTTTTGCAGCATTTTTCTGATTTTTTATGCAATGTCGTTTTGTGAACTTGATTTTTGCATCAACAAAAAATGCCAGGGCTGTGAAATTTTATAAAAACTGTCATAGACCTTTAACCATGGTCAATAAGAAAGGAGATTGGATTCACGTTGGGAGATTGGATTCTGAATAACTTCTTCCTTCAATTTTATGATTGCTTTATATAAACAATAGTGATCCATGAATTCAGTAGTTGTTTCAG

mRNA sequence

GAAGATTTGTCATATTGCAATTTCTCAGCTTCCAAACTAAACCTAATCAGAGTTCCTAGTTTCCTCTCAGATTCGTGTTTCAGCTTTCAAAGTTGTTTTTCAGGTTTTCTTGCGTGCTCTTTTGCTCCAAGTCAGTACTATTTGTTAGCGATGGCGGATGAAGAGCCCGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAACTATTTACGAAACTAAAGTAATGGGAGAGAGTTGTTAGGGATGTGGGGATCCTATCCTTTTGCTTTTGCAGCATTTTTCTGATTTTTTATGCAATGTCGTTTTGTGAACTTGATTTTTGCATCAACAAAAAATGCCAGGGCTGTGAAATTTTATAAAAACTGTCATAGACCTTTAACCATGGTCAATAAGAAAGGAGATTGGATTCACGTTGGGAGATTGGATTCTGAATAACTTCTTCCTTCAATTTTATGATTGCTTTATATAAACAATAGTGATCCATGAATTCAGTAGTTGTTTCAG

Coding sequence (CDS)

GAAGATTTGTCATATTGCAATTTCTCAGCTTCCAAACTAAACCTAATCAGAGTTCCTAGTTTCCTCTCAGATTCGTGTTTCAGCTTTCAAAGTTGTTTTTCAGGTTTTCTTGCGTGCTCTTTTGCTCCAAGTCAGTACTATTTGTTAGCGATGGCGGATGAAGAGCCCGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAACTATTTACGAAACTAAAGTAA

Protein sequence

EDLSYCNFSASKLNLIRVPSFLSDSCFSFQSCFSGFLACSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

Homology

[Close]

BLAST of MELO3C019495.2 vs. NCBI nr
Match: XP_022942987.1 (cytochrome b-c1 complex subunit 6-like [Cucurbita moschata])

HSP 1 Score: 179.5 bits (454), Expect = 6.8e-42
Identity = 82/91 (90.11%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 29  FQSCFSGFLACSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD 88
           F     GFLA SFAPSQ YLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD
Sbjct: 44  FVLLLQGFLAFSFAPSQCYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD 103

Query: 89  DSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK 120
           DSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Sbjct: 104 DSGHKHCTGQYFDYWSCVDKCVAPKLFTKIK 134

[Close]

BLAST of MELO3C019495.2 vs. NCBI nr
Match: XP_008456103.1 (PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo] >XP_008456104.1 PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo])

HSP 1 Score: 157.1 bits (396), Expect = 3.6e-35
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 51  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 110
           MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV
Sbjct: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60

Query: 111 APKLFTKLK 120
           APKLFTKLK
Sbjct: 61  APKLFTKLK 69

[Close]

BLAST of MELO3C019495.2 vs. NCBI nr
Match: XP_022983580.1 (cytochrome b-c1 complex subunit 6-like [Cucurbita maxima])

HSP 1 Score: 156.0 bits (393), Expect = 8.0e-35
Identity = 67/69 (97.10%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 51  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 110
           MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSC+DKCV
Sbjct: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCVDKCV 60

Query: 111 APKLFTKLK 120
           APKLFTK+K
Sbjct: 61  APKLFTKIK 69

[Close]

BLAST of MELO3C019495.2 vs. NCBI nr
Match: XP_022922477.1 (cytochrome b-c1 complex subunit 6 [Cucurbita moschata] >XP_022985141.1 cytochrome b-c1 complex subunit 6-like [Cucurbita maxima] >XP_023551986.1 cytochrome b-c1 complex subunit 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 51  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 110
           MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCV
Sbjct: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCV 60

Query: 111 APKLFTKLK 120
           APKLFTKLK
Sbjct: 61  APKLFTKLK 69

[Close]

BLAST of MELO3C019495.2 vs. NCBI nr
Match: XP_004140689.1 (PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis sativus] >XP_011651255.1 PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 1.8e-34
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 51  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 110
           MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV
Sbjct: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60

Query: 111 APKLFTKLK 120
           APKL TKLK
Sbjct: 61  APKLLTKLK 69

[Close]

BLAST of MELO3C019495.2 vs. TAIR10
Match: AT1G15120.2 (Ubiquinol-cytochrome C reductase hinge protein)

HSP 1 Score: 127.1 bits (318), Expect = 7.2e-30
Identity = 61/88 (69.32%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 22  LSDSCFSFQSCFSGFLACSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQAC 81
           LS S FSFQ  F+                MAD+E VD K+YLEE+CKPKCVKPLLEYQAC
Sbjct: 55  LSISVFSFQLTFN----------------MADDEVVDPKKYLEESCKPKCVKPLLEYQAC 114

Query: 82  VKRIQGDDSGHKHCTGQYFDYWSCIDKC 110
           VKRIQGDDSGHKHCTGQYFDYW CIDKC
Sbjct: 115 VKRIQGDDSGHKHCTGQYFDYWQCIDKC 126

[Close]

BLAST of MELO3C019495.2 vs. TAIR10
Match: AT2G01090.1 (Ubiquinol-cytochrome C reductase hinge protein)

HSP 1 Score: 122.1 bits (305), Expect = 2.3e-28
Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 51  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 110
           M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV
Sbjct: 1   MPEEDVVDQKRYFEESCKPKCVKPLLEYQACVKRIQDDESGHKHCTGQYFDYWHCVDKCV 60

Query: 111 A 112
           +
Sbjct: 61  S 61

[Close]

BLAST of MELO3C019495.2 vs. Swiss-Prot
Match: sp|P48504|QCR6_SOLTU (Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26
Identity = 51/69 (73.91%), Postives = 57/69 (82.61%), Query Frame = 0


Query: 51  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 110
           M+DEE VD K  LE +CKPKCV+ L EYQAC KR++GD+SGHKHCTGQYFDYW CIDKCV
Sbjct: 1   MSDEEVVDPKATLEVSCKPKCVRQLKEYQACTKRVEGDESGHKHCTGQYFDYWHCIDKCV 60

Query: 111 APKLFTKLK 120
           A KLF  LK
Sbjct: 61  AAKLFDHLK 69

[Close]

BLAST of MELO3C019495.2 vs. Swiss-Prot
Match: sp|Q1ZXP3|QCR6_DICDI (Probable cytochrome b-c1 complex subunit 6 OS=Dictyostelium discoideum OX=44689 GN=uqcrh PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.7e-07
Identity = 25/58 (43.10%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 63  LEEACKPKCVKPLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAPKLFTKLK 120
           ++E C   C K    YQAC  R+   +   K +C GQ+ ++  CIDKCV PKLF +LK
Sbjct: 12  IQEGCASGCEKSWSAYQACSGRVAKLEHDEKANCLGQFLEHVQCIDKCVGPKLFAQLK 69

[Close]

BLAST of MELO3C019495.2 vs. TrEMBL
Match: tr|A0A1S3C350|A0A1S3C350_CUCME (Cytochrome b-c1 complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103496141 PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.4e-35
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 51  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 110
           MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV
Sbjct: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60

Query: 111 APKLFTKLK 120
           APKLFTKLK
Sbjct: 61  APKLFTKLK 69

[Close]

BLAST of MELO3C019495.2 vs. TrEMBL
Match: tr|A0A0A0L6I2|A0A0A0L6I2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G212480 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.6e-34
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 51  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 110
           +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV
Sbjct: 60  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 119

Query: 111 APKLFTKLK 120
           APKL TKLK
Sbjct: 120 APKLLTKLK 128

[Close]

BLAST of MELO3C019495.2 vs. TrEMBL
Match: tr|M5XBF4|M5XBF4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G560700 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-33
Identity = 64/73 (87.67%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 47  YLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCI 106
           ++  MADEEPVDQK+YLEE+CKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSC+
Sbjct: 49  FVFCMADEEPVDQKKYLEESCKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCV 108

Query: 107 DKCVAPKLFTKLK 120
           DKCVAPKLF KLK
Sbjct: 109 DKCVAPKLFPKLK 121

[Close]

BLAST of MELO3C019495.2 vs. TrEMBL
Match: tr|A0A2I0J9N8|A0A2I0J9N8_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_026555 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.7e-33
Identity = 68/78 (87.18%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 44  SQYYLLA--MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFD 103
           S Y LLA   ADEEPVDQK+YLEE+CKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFD
Sbjct: 33  SYYCLLADLRADEEPVDQKKYLEESCKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFD 92

Query: 104 YWSCIDKCVAPKLFTKLK 120
           YWSC+DKCVAPKLF KLK
Sbjct: 93  YWSCVDKCVAPKLFVKLK 110

[Close]

BLAST of MELO3C019495.2 vs. TrEMBL
Match: tr|B9H7R3|B9H7R3_POPTR (Cytochrome b-c1 complex subunit 6 OS=Populus trichocarpa OX=3694 GN=POPTR_005G191000v3 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.2e-33
Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 51  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 110
           MADEEPVD K+YLEEACKPKCV+PLLEYQACVKRIQGD+SGHKHCTGQYFDYWSC+DKCV
Sbjct: 1   MADEEPVDPKKYLEEACKPKCVRPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCV 60

Query: 111 APKLFTKLK 120
           APKLFTKLK
Sbjct: 61  APKLFTKLK 69

The following BLAST results are available for this feature:

BLAST of MELO3C019495.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942987.1	6.8e-42	90.11	cytochrome b-c1 complex subunit 6-like [Cucurbita moschata]	[more]
XP_008456103.1	3.6e-35	100.00	PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo] >XP_008456104.1 PRED...	[more]
XP_022983580.1	8.0e-35	97.10	cytochrome b-c1 complex subunit 6-like [Cucurbita maxima]	[more]
XP_022922477.1	1.0e-34	98.55	cytochrome b-c1 complex subunit 6 [Cucurbita moschata] >XP_022985141.1 cytochrom...	[more]
XP_004140689.1	1.8e-34	98.55	PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis sativus] >XP_011651255.1 P...	[more]

BLAST of MELO3C019495.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G15120.2	7.2e-30	69.32	Ubiquinol-cytochrome C reductase hinge protein	[more]
AT2G01090.1	2.3e-28	81.97	Ubiquinol-cytochrome C reductase hinge protein	[more]

BLAST of MELO3C019495.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P48504\|QCR6_SOLTU	2.1e-26	73.91	Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum OX=4113 PE=1 SV=2	[more]
sp\|Q1ZXP3\|QCR6_DICDI	3.7e-07	43.10	Probable cytochrome b-c1 complex subunit 6 OS=Dictyostelium discoideum OX=44689 ...	[more]

BLAST of MELO3C019495.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C350\|A0A1S3C350_CUCME	2.4e-35	100.00	Cytochrome b-c1 complex subunit 6 OS=Cucumis melo OX=3656 GN=LOC103496141 PE=3 S...	[more]
tr\|A0A0A0L6I2\|A0A0A0L6I2_CUCSA	2.6e-34	97.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G212480 PE=4 SV=1	[more]
tr\|M5XBF4\|M5XBF4_PRUPE	1.0e-33	87.67	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G560700 PE=4 SV=1	[more]
tr\|A0A2I0J9N8\|A0A2I0J9N8_PUNGR	1.7e-33	87.18	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_026555 PE=4 SV=1	[more]
tr\|B9H7R3\|B9H7R3_POPTR	2.2e-33	92.75	Cytochrome b-c1 complex subunit 6 OS=Populus trichocarpa OX=3694 GN=POPTR_005G19...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008121	ubiquinol-cytochrome-c reductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c

Vocabulary: **INTERPRO**
Term	Definition
IPR003422	Cyt_b-c1_6
IPR036811	Ubol_cytC_Rdtase_hinge_dom_sf
IPR023184	Ubol_cytC_Rdtase_hinge_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	hydrogen ion transmembrane transport
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0015992	proton transport
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0005750	mitochondrial respiratory chain complex III
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019495.2.1	MELO3C019495.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023184	Ubiquinol-cytochrome C reductase hinge domain	PFAM	PF02320	UCR_hinge	coord: 58..119 e-value: 1.5E-22 score: 79.5
IPR036811	Ubiquinol-cytochrome C reductase hinge domain superfamily	GENE3D	G3DSA:1.10.287.20		coord: 50..119 e-value: 6.3E-23 score: 82.6
IPR036811	Ubiquinol-cytochrome C reductase hinge domain superfamily	SUPERFAMILY	SSF81531	Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	coord: 51..119
IPR003422	Cytochrome b-c1 complex, subunit 6	PIRSF	PIRSF000019	Bc1_11K	coord: 44..119 e-value: 1.1E-35 score: 119.5
IPR003422	Cytochrome b-c1 complex, subunit 6	PANTHER	PTHR15336	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEIN	coord: 51..119
None	No IPR available	PANTHER	PTHR15336:SF2	SUBFAMILY NOT NAMED	coord: 51..119

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C019495.2	Csa3G212480	Cucumber (Chinese Long) v2	cumedB238
MELO3C019495.2	CSPI03G18710	Wild cucumber (PI 183967)	cpimedB239
MELO3C019495.2	CmaCh04G005070	Cucurbita maxima (Rimu)	cmamedB777
MELO3C019495.2	CmaCh16G003670	Cucurbita maxima (Rimu)	cmamedB346
MELO3C019495.2	CmoCh04G005450	Cucurbita moschata (Rifu)	cmomedB774
MELO3C019495.2	CmoCh16G003920	Cucurbita moschata (Rifu)	cmomedB332
MELO3C019495.2	Lsi05G001970	Bottle gourd (USVL1VR-Ls)	lsimedB384
MELO3C019495.2	Cp4.1LG01g02120	Cucurbita pepo (Zucchini)	cpemedB481
MELO3C019495.2	Cp4.1LG14g04110	Cucurbita pepo (Zucchini)	cpemedB234
MELO3C019495.2	CsGy3G018560	Cucumber (Gy14) v2	cgybmedB215
MELO3C019495.2	ClCG05G009840	Watermelon (Charleston Gray)	medwcgB417
MELO3C019495.2	Cla97C05G092230	Watermelon (97103) v2	medwmbB424
MELO3C019495.2	Bhi01G001240	Wax gourd	medwgoB531
MELO3C019495.2	Carg08176	Silver-seed gourd	carmedB0384
MELO3C019495.2	Carg11295	Silver-seed gourd	carmedB0661
MELO3C019495.2	CsaV3_3G018780	Cucumber (Chinese Long) v3	cucmedB246

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019495.2	Watermelon (97103) v1	medwmB448