CSPI03G18710 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI03G18710
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Cytochrome b-c1 complex subunit 6
Location	Chr3 : 14330396 .. 14334729 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGATTTGTCATATTGCAATTTCTCAGCTTCCAAACTAAACCTAATCAGAGTTCCTAGTTTCCTCTCAGATTCGTGTTTCAGCTTCCAAAGGTATGAGTTTTTTAGCCCAAGAATTCTTCCCTTGTTTTTAACTTTTTTATTTGTTTCTAAGCTTTTTCTTTATTTTTTTTTATTTTTTATTCTTGTTCGATTTTTATTATCAGATCCAACATTCATCGATCGTGTATGTTTTGTATTTTCCGGTGCTTTTGATTTCTTCTATCATTTGGGATCGTTTGCTCTGAATTTTTCCAAGAAATCGATGGAGTATTATGTTTTTTTTGTTTTACAATATTCATTTCTTTCTTCTACCTCTCAGTAGTCGTTTGTATTTGAGGGTTTTTCCCCTCTTGTTGCATTATATGATCTGATTCTTGTTTTTGATAGACATTCAACTTTCCAATTTTGAAATGGGGGGTTTCCATTTATTTGGAATGGGATCAAGTTTAACGAGTATTATTACGTGGGAACAAATCGTTGGATTGAAAGCAATTGCTTTCCCTTTGGTCAAAATTGCAAGGTTCTCCATATTTCAGAGTATCTTCCTTTTTTAATGTTTCATTTCTGAACCTGAAATCTAATCTCATGGCAACGACGGTCTTAAAAGATTGAGTTTAGCTGGAGACTCGTTAATTACAAATCTCTTTTTTTTAAAAAAAAAAATATATATTTATATATTTTTTCTGCCATTCCTCAAATGAATGCTTGAGTTAAAGGCATGGACATCTCGAATTTGTGGAATAAAGTTCATGGTTTTGGTGTCAGTATTTTTGTACAAACTAAAACAATGACCTTTTTCTTTATTCATATTGATGCTTAATTTGAATTGTTTTTCAGGTTTTCTTGCGTGCTCTTTCCCTCCAAGTCAGTACTCTTTGTTAGCCATGTGAGTATCCCCCTTTTCTTTCCTTTCTGTTTTACCATGTACTATTATCTTCTTGCCTTTTTATTTCTTACACAATGAACTTTTTTATTGTCTGCTACATTACTATAGATTTGTATCCCTGTAGTCAAGTGCTGTTTTGTTAGCGTTTATATTTTTATTTGGTATTCATAAATTTCTAAGCCACTATTCTTCCTTTGTAAGTATAGCTCATTGCTGTCAGAAGAGTTATTAAGGTGGACTGTAAAGCACATACTGGGGCAAACTTTTCTCTGAATATTGATATTTTGAGCAACTATCATGACAAGTATCATCTCTCTGTTAGGATCTTACTTGAACAGGATCTGTTCTATAGGTAGTAAACTATGACCTTGAGTTCTAAGGAGACAAGTATCATCTCCCTGTTGCTGCAATTGAAAAGATGAAATATAAAAGCGCTGATGAATTTTGCACACATTGGAAAGAATCGGTTTGCTGAAGATTTAGTTTCAATGAGACAGTAGATGTGCTAGCATTTAGTAGATGTAGCATTTTGTTCGCTTGGTGATGTGATCAACATTTTTGGAGATTATTAAGGTTTAATAATCAGCAGGATAGTTGCATCATTGCATGTCTTCTCCATACCCTCTATCTTTATCTTTCATAATGTTAAAGATTATTTGTTTTGATGTCAACTTATCTATGTTTCCTTGATTCTTCATAATATGTAGGGCGGATGAAGAGCCTGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGTACATTGTGTTTTATTGATACTTTGTTGTGGGGGATTGATGAGTCTTAGTGAAGTTGGATATACTAATTTCTTCAGTTGTTAGACTTGTATTCATTATTCATTCTTTTTTTCATAATTACTCAACTTTAAAAGTCTGGTCTCATGAGTAGGTATGTTTCTATTCTTTTATTTGGTTAGAAATTAATCTGTCACTATGCTAGATTGAAGATTTTGCATCTCTCCAGTGAATGCGTTCATTATAAATGAGTAGATTTTCTTGTAGCTTCAAACTTTTCTTTGTGACAGAACGGGCAGCCACTGGCCCACCATTGACTCAGTCTTATAGGTCTTTCTGGAGAATAACGAAGCTTAGTTACAGGAGTGAGTTTGATATTAGGTACTTTCTGACAAGACTTGGGCTTCGGCTTGTCATGGTGAATACCAAAATACCATCCTTCAAGAGCAGGAACTGATGGATAGAGGGTAAAGAGAGAAAAAAAATGAAAAGGAAGTTAGAATTGGATTTGGCTCCACCTTTGTTTCTGAATTTTCTTTTGGAAAAAACCAATTGATGTCACCTGGTCCTGATCCCGATCAATAAAGCCGCGCCTCCAGGATAAAGTCTTTCTTTGGGCTGTATGATATTTGGAACATTATTTGGATATTGTGGGCATATTAATGATTTAACTAATAAGTGGTCGTAAGTAAATGAACTTAATAATAAAACAAACAGAATGAAGTCGCTCAAATGCTAAGTAGCATCATTTAAATTCTCATTCTTTTAGTAATTCCAACAACATATTTCATCATTCTGTTTCAATTCTGGGTCCTATCTTGCCATTAAAAGTAACAGGAAGAAAGTTGCTAGTGCAACCAGTTTTTTGGTTTTGGATGAGAATCTTTTCACCTGACAAGCTTACTTTTGGTCTCCTTATGTTGGGTTTTCTTTGTATGCTCTTGTATATTCTTTGTTAAGAAGTTGTTAAGAAGCCTAGTTTTTTTGTCCAAAGCTGTTAGTGCAACCTTACGATGAACACAATTTGACCCTGTGCAATTATGGTGAAAGATCCTTGCTTAGCATGGCAATCATTTTGGTCATGGAGGCAACAATAACCTTCCTTAACAAATTGTCTTAGCTCCCTTTCGTGAATTCAAATCAATATTGAGGACAAAGATATCCTTTTGCCAAAGCTTTAGATATCTCATGTTTCACTGATTCTAGTTGATACTGTGCTTTGGGGTTCAAGTTGACTTGGTCATTCGACATCCTTTTATTGTGAGTTTGATGAATCTCAAAACATGTGTTGGACTTCTTTTTCCTAGGATGCTAGACCTTACCAAATTTGGAGAATTGTTTATTTTGACCTTCATATATGACCTGTTTCCCCTAGTTTTTATGTTTTCCTCTGGATTTTGATTTTGAATACCACTTGTAATTACTCTACAGGTTTAATTTTGTGTAATTTCGTGTAACTGGAGTTCTTTTAGTTGAGCTCCCCATTCTTTTTTCCTATGAGTGTTGAGCTTCCGACCATCATTGGTTGATCAGTGGTAAAAAAGGAAAGTCTTTCAGTAACTAATTAAGAGGTTATAGGTTGACCCATTGGAGACACTCTCAACCATCATAGGTTGACCTAGTGGTTCAATTCATGGTGGACACTTAGATAGGAATTAATTTTCTGAGTTTTTTTGAAACCCAAATGATGTAGGGTATGTAGGGTCAAGCGGGTTGTCCCATTAGATTAGTTGAGATGCGCCTAAGCTAACATGGACACTCGAAAGATATCAAAAAAGGAAAGAAAGAAAAAGAAAAGAGAGTTGAGCTCCCAAAAATATGTATTTTCCCTGAAAATTGGCAAAGTTTATTTAGTCTCTCATATGAGTTTCAGATGATGTCGTTGCTAATATTTTAGTTTATTAACCATGTCTGAGCAGATTCAAATTCTATCAATAGTATAAAGATAAGGTAAAAATGATGGTTATTGTCTTTCCATGTCATAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTAAGTAGCTCTTGGTTCTGTTAGAAACTAAATTGTAGAAAAAGTTGTACACATAAACAAGTTCATTTTAGAAATAAAAACTGAAATAATAACCTTGGAACTAACTTGAAATACACTTTTTTCTTGCAGGTTGCACCAAAACTATTGACGAAACTAAAGTAATGGGAGAGTTGTTAGGGATGTGGGGATCCTATCCTTTTGCTTTTGCAGCATTTTTCTGATTTTTTATGCAATGTCGTTTTGTGAACTTGATTTTTGCATCAACAAAAAATGCCAAGGGCTGTGAAATTTTATAAAAACTGCCAGACCTTTAACCATGGTCAATAAGAAAGGAGATTGGATTCACGTTTGGAGATTTTGAATAACTTCTTCCTTCAATTTTATGGTTGCTTTATATAAACATTAGTGATAGATGAATTCTGGTTTCAGAAAACAAATGTTTAGTAAGGTGTGATCCATTTTTTAGTTTGCTGTTCTTTGATTTATAAAAAATGGCTGTGTTGTTTGAGAATAAGTAGCCGGTTGAGGTTCAATTTGGCAGAAG

mRNA sequence

ATGGCGGATGAAGAGCCTGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAACTATTGACGAAACTAAAGTAA

Coding sequence (CDS)

ATGGCGGATGAAGAGCCTGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGCATGCGTGAAGAGAATCCAAGGAGATGACAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAACTATTGACGAAACTAAAGTAA

Homology

[Close]

BLAST of CSPI03G18710 vs. Swiss-Prot
Match: QCR6_SOLTU (Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 6.0e-26
Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 1


Query: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
          M+DEE VD K  LE +CKPKCV+ L EYQAC KR++GD+SGHKHCTGQYFDYW CIDKCV
Sbjct: 1  MSDEEVVDPKATLEVSCKPKCVRQLKEYQACTKRVEGDESGHKHCTGQYFDYWHCIDKCV 60

Query: 61 APKLLTKLK 70
          A KL   LK
Sbjct: 61 AAKLFDHLK 69

[Close]

BLAST of CSPI03G18710 vs. Swiss-Prot
Match: QCR6_DICDI (Probable cytochrome b-c1 complex subunit 6 OS=Dictyostelium discoideum GN=uqcrh PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 8.1e-07
Identity = 24/58 (41.38%), Postives = 33/58 (56.90%), Query Frame = 1


Query: 13 LEEACKPKCVKPLLEYQACVKRIQGDDSGHK-HCTGQYFDYWSCIDKCVAPKLLTKLK 70
          ++E C   C K    YQAC  R+   +   K +C GQ+ ++  CIDKCV PKL  +LK
Sbjct: 12 IQEGCASGCEKSWSAYQACSGRVAKLEHDEKANCLGQFLEHVQCIDKCVGPKLFAQLK 69

[Close]

BLAST of CSPI03G18710 vs. TrEMBL
Match: A0A0A0L6I2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G212480 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.9e-35
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
           +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV
Sbjct: 60  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 119

Query: 61  APKLLTKLK 70
           APKLLTKLK
Sbjct: 120 APKLLTKLK 128

[Close]

BLAST of CSPI03G18710 vs. TrEMBL
Match: M5XBF4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017907mg PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.5e-33
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 1


Query: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
           MADEEPVDQK+YLEE+CKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSC+DKCV
Sbjct: 53  MADEEPVDQKKYLEESCKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCV 112

Query: 61  APKLLTKLK 70
           APKL  KLK
Sbjct: 113 APKLFPKLK 121

[Close]

BLAST of CSPI03G18710 vs. TrEMBL
Match: B9H7R3_POPTR (Cytochrome b-c1 complex subunit 6 OS=Populus trichocarpa GN=POPTR_0005s21330g PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.5e-33
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 1


Query: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
          MADEEPVD K+YLEEACKPKCV+PLLEYQACVKRIQGD+SGHKHCTGQYFDYWSC+DKCV
Sbjct: 1  MADEEPVDPKKYLEEACKPKCVRPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCV 60

Query: 61 APKLLTKLK 70
          APKL TKLK
Sbjct: 61 APKLFTKLK 69

[Close]

BLAST of CSPI03G18710 vs. TrEMBL
Match: C6T1W4_SOYBN (Cytochrome b-c1 complex subunit 6 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.5e-33
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = 1


Query: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
          MADEEPVDQKRYLEE+CKPKCVKPLLEYQAC+KRI GDDSG KHCTGQYFDYWSCIDKCV
Sbjct: 1  MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDDSGQKHCTGQYFDYWSCIDKCV 60

Query: 61 APKLLTKLK 70
          APKL TKLK
Sbjct: 61 APKLFTKLK 69

[Close]

BLAST of CSPI03G18710 vs. TrEMBL
Match: A0A0B2RMD7_GLYSO (Cytochrome b-c1 complex subunit 6 OS=Glycine soja GN=glysoja_005536 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.5e-33
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = 1


Query: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
          MADEEPVDQKRYLEE+CKPKCVKPLLEYQAC+KRI GDDSG KHCTGQYFDYWSCIDKCV
Sbjct: 1  MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDDSGQKHCTGQYFDYWSCIDKCV 60

Query: 61 APKLLTKLK 70
          APKL TKLK
Sbjct: 61 APKLFTKLK 69

[Close]

BLAST of CSPI03G18710 vs. TAIR10
Match: AT1G15120.2 (AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein)

HSP 1 Score: 125.9 bits (315), Expect = 9.5e-30
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 1


Query: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKC 60
           MAD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYW CIDKC
Sbjct: 68  MADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKC 126

[Close]

BLAST of CSPI03G18710 vs. TAIR10
Match: AT2G01090.1 (AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein)

HSP 1 Score: 121.7 bits (304), Expect = 1.8e-28
Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 1


Query: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
          M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ D+SGHKHCTGQYFDYW C+DKCV
Sbjct: 1  MPEEDVVDQKRYFEESCKPKCVKPLLEYQACVKRIQDDESGHKHCTGQYFDYWHCVDKCV 60

Query: 61 A 62
          +
Sbjct: 61 S 61

[Close]

BLAST of CSPI03G18710 vs. NCBI nr
Match: gi|449445858|ref|XP_004140689.1| (PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis sativus])

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-35
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
          MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV
Sbjct: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60

Query: 61 APKLLTKLK 70
          APKLLTKLK
Sbjct: 61 APKLLTKLK 69

[Close]

BLAST of CSPI03G18710 vs. NCBI nr
Match: gi|700202422|gb|KGN57555.1| (hypothetical protein Csa_3G212480 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 4.1e-35
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1


Query: 1   MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
           +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV
Sbjct: 60  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 119

Query: 61  APKLLTKLK 70
           APKLLTKLK
Sbjct: 120 APKLLTKLK 128

[Close]

BLAST of CSPI03G18710 vs. NCBI nr
Match: gi|659112182|ref|XP_008456103.1| (PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo])

HSP 1 Score: 154.8 bits (390), Expect = 5.4e-35
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 1


Query: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
          MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV
Sbjct: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60

Query: 61 APKLLTKLK 70
          APKL TKLK
Sbjct: 61 APKLFTKLK 69

[Close]

BLAST of CSPI03G18710 vs. NCBI nr
Match: gi|645223858|ref|XP_008218833.1| (PREDICTED: cytochrome b-c1 complex subunit 6 [Prunus mume])

HSP 1 Score: 148.3 bits (373), Expect = 5.1e-33
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 1


Query: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
          MADEEPVDQK+YLEE+CKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSC+DKCV
Sbjct: 1  MADEEPVDQKKYLEESCKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCV 60

Query: 61 APKLLTKLK 70
          APKL  KLK
Sbjct: 61 APKLFPKLK 69

[Close]

BLAST of CSPI03G18710 vs. NCBI nr
Match: gi|356558587|ref|XP_003547586.1| (PREDICTED: cytochrome b-c1 complex subunit 6 [Glycine max])

HSP 1 Score: 148.3 bits (373), Expect = 5.1e-33
Identity = 64/69 (92.75%), Postives = 66/69 (95.65%), Query Frame = 1


Query: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60
          MADEEPVDQKRYLEE+CKPKCVKPLLEYQAC+KRI GDDSG KHCTGQYFDYWSCIDKCV
Sbjct: 1  MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDDSGQKHCTGQYFDYWSCIDKCV 60

Query: 61 APKLLTKLK 70
          APKL TKLK
Sbjct: 61 APKLFTKLK 69

The following BLAST results are available for this feature:

BLAST of CSPI03G18710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
QCR6_SOLTU	6.0e-26	72.46	Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2	[more]
QCR6_DICDI	8.1e-07	41.38	Probable cytochrome b-c1 complex subunit 6 OS=Dictyostelium discoideum GN=uqcrh ...	[more]

BLAST of CSPI03G18710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6I2_CUCSA	2.9e-35	98.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G212480 PE=4 SV=1	[more]
M5XBF4_PRUPE	3.5e-33	91.30	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017907mg PE=4 SV=1	[more]
B9H7R3_POPTR	3.5e-33	91.30	Cytochrome b-c1 complex subunit 6 OS=Populus trichocarpa GN=POPTR_0005s21330g PE...	[more]
C6T1W4_SOYBN	3.5e-33	92.75	Cytochrome b-c1 complex subunit 6 OS=Glycine max PE=2 SV=1	[more]
A0A0B2RMD7_GLYSO	3.5e-33	92.75	Cytochrome b-c1 complex subunit 6 OS=Glycine soja GN=glysoja_005536 PE=3 SV=1	[more]

BLAST of CSPI03G18710 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G15120.2	9.5e-30	89.83	Ubiquinol-cytochrome C reductase hinge protein	[more]
AT2G01090.1	1.8e-28	81.97	Ubiquinol-cytochrome C reductase hinge protein	[more]

BLAST of CSPI03G18710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445858\|ref\|XP_004140689.1\|	1.9e-35	100.00	PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis sativus]	[more]
gi\|700202422\|gb\|KGN57555.1\|	4.1e-35	98.55	hypothetical protein Csa_3G212480 [Cucumis sativus]	[more]
gi\|659112182\|ref\|XP_008456103.1\|	5.4e-35	98.55	PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo]	[more]
gi\|645223858\|ref\|XP_008218833.1\|	5.1e-33	91.30	PREDICTED: cytochrome b-c1 complex subunit 6 [Prunus mume]	[more]
gi\|356558587\|ref\|XP_003547586.1\|	5.1e-33	92.75	PREDICTED: cytochrome b-c1 complex subunit 6 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003422	Cyt_b-c1_6
IPR023184	Ubol_cytC_Rdtase_hinge_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c

Vocabulary: **Molecular Function**
Term	Definition
GO:0008121	ubiquinol-cytochrome-c reductase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	hydrogen ion transmembrane transport
biological_process	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0015992	proton transport
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0045275	respiratory chain complex III
cellular_component	GO:0005750	mitochondrial respiratory chain complex III
molecular_function	GO:0008121	ubiquinol-cytochrome-c reductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G18710.1	CSPI03G18710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003422	Cytochrome b-c1 complex, subunit 6	PIR	PIRSF000019	Bc1_11K	coord: 1..69 score: 1.8
IPR003422	Cytochrome b-c1 complex, subunit 6	PANTHER	PTHR15336	UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEIN	coord: 1..69 score: 1.0
IPR023184	Ubiquinol-cytochrome C reductase hinge domain	GENE3D	G3DSA:1.10.287.20		coord: 3..69 score: 9.7
IPR023184	Ubiquinol-cytochrome C reductase hinge domain	PFAM	PF02320	UCR_hinge	coord: 8..69 score: 2.6
IPR023184	Ubiquinol-cytochrome C reductase hinge domain	unknown	SSF81531	Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	coord: 1..69 score: 5.89
None	No IPR available	PANTHER	PTHR15336:SF2	SUBFAMILY NOT NAMED	coord: 1..69 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI03G18710	Csa3G212480	Cucumber (Chinese Long) v2	cpicuB120
CSPI03G18710	MELO3C019495	Melon (DHL92) v3.5.1	cpimeB241
CSPI03G18710	ClCG05G009840	Watermelon (Charleston Gray)	cpiwcgB237
CSPI03G18710	Lsi05G001970	Bottle gourd (USVL1VR-Ls)	cpilsiB209
CSPI03G18710	MELO3C019495.2	Melon (DHL92) v3.6.1	cpimedB239
CSPI03G18710	CsaV3_3G018780	Cucumber (Chinese Long) v3	cpicucB144
CSPI03G18710	Cla97C05G092230	Watermelon (97103) v2	cpiwmbB221
CSPI03G18710	Bhi01G001240	Wax gourd	cpiwgoB283
CSPI03G18710	Cucsa.049630	Cucumber (Gy14) v1	cgycpiB030
CSPI03G18710	CmaCh04G005070	Cucurbita maxima (Rimu)	cmacpiB705
CSPI03G18710	CmaCh16G003670	Cucurbita maxima (Rimu)	cmacpiB326
CSPI03G18710	CmoCh16G003920	Cucurbita moschata (Rifu)	cmocpiB315
CSPI03G18710	CmoCh04G005450	Cucurbita moschata (Rifu)	cmocpiB698
CSPI03G18710	Cp4.1LG01g02120	Cucurbita pepo (Zucchini)	cpecpiB388
CSPI03G18710	Cp4.1LG14g04110	Cucurbita pepo (Zucchini)	cpecpiB208
CSPI03G18710	CsGy3G018560	Cucumber (Gy14) v2	cgybcpiB110
CSPI03G18710	Carg11295	Silver-seed gourd	carcpiB0685
CSPI03G18710	Carg08176	Silver-seed gourd	carcpiB0405

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI03G18710	Watermelon (97103) v1	cpiwmB242