Cp4.1LG14g04110 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g04110
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCytochrome b-c1 complex subunit 6
LocationCp4.1LG14 : 1783332 .. 1786799 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGAGGCAGTTGAAGGTAAATGAGGATGAAAATGGGGTAATTATATTGCCCTAAATGGTAAATTATTCACTGGCTAACCATAAGTTTAGGCATTCAACAACAACAAATTAACCCCACTACATTCCCATATCATTTGTCTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNATTTTAAACATTTTCTTCTTTAAAAATATTATTTTTAAAAAATAATTAACATTGAGGTAGTTATTATATTAATTTAAAAATAAATGTAAAATTAATTAATCTTTTAATTTTAATTTAAAATTTAGTTTCTTATAAAAATTATATATTATATATATATATATTTTTTTACTATTAATAGACAAAGTATAATTTAGACCTTTTTAATTTGTAATTTAATTTGGCTCCAAAAGGGCTTTTTGACCCGACCCGAACAATTGCACCGAATCCGTTTGAACCGGCCCGCGAAGCTTCTTGAACCGGGAAAGTGGGGGATTTGTGATATTGCAGTTTCTCAGCTCCGGAACTAAACCTAATCAGAGTTGCTAGTTTTCTCCCAGATTCGTGTTTCAGCTCCAAGGTATGAATTTGGAGTCGAGAGGCTTTCGCCGTTTTTAAATTTTGTTTGTTTTTGAGCTTTATATAATTATTGTTCTCTGTTTCTCTTTTCTGTTTTTGTTTTTTTGTTTATGATCAGATCCGTGTTTAGTTTTCCTCCATTTGTCGATCGTTTGTTTTGGCATTTATGGGGGCTTTTGATTTCTTCTATCGATTTGATTTGTTTCCTTTGAAGTTTTCTTAGAGATCGATGGAGGTTTTTTGTTTTTCTATGTGCGATTATATTATGTCGTTTGTTCTGCCTCTCAGTAGTTGGTTTTCTAGGGGAATTTGTTATGTTTGATTATATGATCTGAATTTTGTTGTTTTTGATACACATTCAAGTCTCCAATTTTGAAATGGTGTTTCCGTTTCTCTTGTTATGGAATCAAGATTAACGAGTACCATTTGATTTGTGGGTACAAATCATTGGGCTGAAATCAATTGCTTTTCCTTTGGTGAAATTGACGAGACTTTCTGATAGTAGTACCTTCCATTCTGAATGTTTCACATCTGAACCTGAAATCTAATCTTACGTACACAATGATACTCTTAGAAGATGGAGTTTAGCTCGAGGCTGGTCAATTTAAATTCTTAATGGATCTTTTGTATGCCTTTCCTCAAAAGAATGCTTGAGATAAAGGCATGGACATTTTGAATTTGTGGAATGAAGTTCATGGTTTTTGGTGTCAGCATTTATGTGCAAACTAAAATTTAGTTTTAATGTTTTTCAGGTTTTCTTGCCTACTCTTTTGCTCCAAGTCAGTACTATTTATTAGCAATGTAAGTAGCTTTATTGTTATTATTATTATTATTTAGGATTCAGCTTCACCATAAATTATACACTATTTTTTGACCATTTTATTTCTTACACGATGAACTTTTTGATTGTCTGCTATGTACTTTAGATTTGTATCCCTGTAGTCAAGTGCTGTTTTGTTACCGTTTATTGCCTTATTTGGCATTCAGAAATTTCTAAGCACTCTCGTTTTTCCCTCGAAAGTAGCCCATCGTGGTGGGAAGAGTTATTAGGGTGGACTGTGGTGCACATACCTGGACAAATGTTTCTTTGAATCTTGATTTTTGGAGCAATCACCATGACAAGTATCATCTCCCTGCTGCTGAAATGAAATCATGAAATATAGAAGTGCTGTGATTTTTGCATATTTTGGGAAGAATTAGTTTGCTGTAGATTTAGTTTCAATGTAAATCAGACATTTAGCAGATGTAAGGTTTTTGGAGATTTGTAAGGTTTAATAATCAGTAGGATAGTTATATTCTCAAATACCAATGATTAAAGTATGCTGGAGTGGAAATTGAGATCTTCATATGGTTGGAACTTGGAAGCTACTTTTACATGCATTTCTTTTCCATACTCTGTCTTTTGTGTTTCATTGTGTTGAAGATTATTTGTATTGATATCTACGTTTCTTTGTTTCCTCGTATGTAGGGCGGATGAAGAACCTGTTGATCAGAAAAGGTATCTTGAAGAAGCTTGCAAGCCCAAGTGTGTGAAACCACTACTTGAATATCAGGTACAGGGTGTTAAGTAGAGAAGGATTTAAAAAATAAAACAAAGACAAGCCACTCAAATGCTAAGTAGTAGCACTATTTAAATTCTCTTTTTATTGGTCGTAACAACATTATATTTCATAAGTTCTCTTTTGATTATGCGTCTTATTTTTGCCGTTGAAGGTAATAGTAAGAAAGTTGTTAGTGCACCCTTTTTCATTCTTTTGGATGGAAGTCACTTTTCGCTTAACGAGCTTACTTTCGGTTTCCTTTTGCTGGTTCTTTTTGTATGCTCTTGTATATACTTTCATTAAGAAGCCCTGTTTCTCATCCAGAGGTGTTAGGGCGCTTGCCCTTGGCAATTATGGTGAAAGATCCTTGGCTATCGTGCTAATCATTTAGGTCACGGAGGCAACATTAGCCTTCCTCAACAAATTGTCTTTTACGAAATGTAGCTCCTTTGTTCTGTGAATTCAACTCAATATTGATGGCAAATTGAGATATGTTTTTCCTCGAACTTGAGACAACTCACGTTTCACTGATTCTAGTTGATATCATGCTTTGGGGTTCACGTTGATTTGGTCACTTGTCGTCCTTTTATTGTGGTGTTGATGAATCTCAACCAGTCATCAAGTTTTATGCAATCTCTTATATCTATGGGTGTCAGCTGGTGATTGATTGACATATAGGAACAAAAAGGGTCTTAATTTTTTAGTTTGTTTATCACGTCTGAGCAGATTCAAATTAAGGTAAAATGATGGTTATTGTCTTTCGATGTCATAGGCGTGCGTGAAGAGAATCCAAGGGGACGAGAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATCGACAAATGTGTAAGTAACTTTCAGTTTTTATAGAAATTAGATTACAGAATCAAACGAGCTCGTGCTCGAGCCTTGAACTAACTTCAAAGATGCTGTTCTTGCAGGTTGCACCAAAACTATTTACGAAACTGAAGTAATGGACAATTGTTAGGGATGTGGGGATCCTTTCCTTTTGTGCTTGATTTTTTATGCAACCTGTTTTTGTGGACTTGGTTTTTGCATCTACAAAAAATGCCAAGGGCTGTGCAATTTTATAAAAATTATGAAGACCTTTAACCATGGTCAATAAGAAAGGATGTTGGATTCACGTTTTGAGCTTGTGAAAACTTCTTCCTTTAATGCTATGATTGCTTTATATCAACATTAGTGATCTAAACCAGTTAGTTTTAGAATTTGCTGTTACTCGGTTTGTCTAATGGCTGTGCATTTTGAGAATAATTTGCCCATTGAGGTTCAGTTTGGGACAAGTAAATTGTCACTTTT

mRNA sequence

ATGTTCGAGGCAGTTGAAGGTTTTCTTGCCTACTCTTTTGCTCCAAGTCAGTACTATTTATTAGCAATGGCGGATGAAGAACCTGTTGATCAGAAAAGGTATCTTGAAGAAGCTTGCAAGCCCAAGTGTGTGAAACCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCAAGGGGACGAGAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATCGACAAATGTGTTGCACCAAAACTATTTACGAAACTGAAGTAATGGACAATTGTTAGGGATGTGGGGATCCTTTCCTTTTGTGCTTGATTTTTTATGCAACCTGTTTTTGTGGACTTGGTTTTTGCATCTACAAAAAATGCCAAGGGCTGTGCAATTTTATAAAAATTATGAAGACCTTTAACCATGGTCAATAAGAAAGGATGTTGGATTCACGTTTTGAGCTTGTGAAAACTTCTTCCTTTAATGCTATGATTGCTTTATATCAACATTAGTGATCTAAACCAGTTAGTTTTAGAATTTGCTGTTACTCGGTTTGTCTAATGGCTGTGCATTTTGAGAATAATTTGCCCATTGAGGTTCAGTTTGGGACAAGTAAATTGTCACTTTT

Coding sequence (CDS)

ATGTTCGAGGCAGTTGAAGGTTTTCTTGCCTACTCTTTTGCTCCAAGTCAGTACTATTTATTAGCAATGGCGGATGAAGAACCTGTTGATCAGAAAAGGTATCTTGAAGAAGCTTGCAAGCCCAAGTGTGTGAAACCACTACTTGAATATCAGGCGTGCGTGAAGAGAATCCAAGGGGACGAGAGTGGTCATAAGCATTGCACTGGACAATATTTTGATTACTGGTCTTGCATCGACAAATGTGTTGCACCAAAACTATTTACGAAACTGAAGTAA

Protein sequence

MFEAVEGFLAYSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Homology
[Close]
BLAST of Cp4.1LG14g04110 vs. Swiss-Prot
Match: QCR6_SOLTU (Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 9.2e-27
Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 1 

Query: 23 MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCV 82
          M+DEE VD K  LE +CKPKCV+ L EYQAC KR++GDESGHKHCTGQYFDYW CIDKCV
Sbjct: 1  MSDEEVVDPKATLEVSCKPKCVRQLKEYQACTKRVEGDESGHKHCTGQYFDYWHCIDKCV 60

Query: 83 APKLFTKLK 92
          A KLF  LK
Sbjct: 61 AAKLFDHLK 69

[Close]
BLAST of Cp4.1LG14g04110 vs. Swiss-Prot
Match: QCR6_DICDI (Probable cytochrome b-c1 complex subunit 6 OS=Dictyostelium discoideum GN=uqcrh PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-07
Identity = 26/58 (44.83%), Postives = 34/58 (58.62%), Query Frame = 1 

Query: 35 LEEACKPKCVKPLLEYQACVKRIQGDESGHK-HCTGQYFDYWSCIDKCVAPKLFTKLK 92
          ++E C   C K    YQAC  R+   E   K +C GQ+ ++  CIDKCV PKLF +LK
Sbjct: 12 IQEGCASGCEKSWSAYQACSGRVAKLEHDEKANCLGQFLEHVQCIDKCVGPKLFAQLK 69

[Close]
BLAST of Cp4.1LG14g04110 vs. TrEMBL
Match: M5XBF4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017907mg PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.9e-34
Identity = 66/81 (81.48%), Postives = 71/81 (87.65%), Query Frame = 1 

Query: 11  YSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQ 70
           Y       ++  MADEEPVDQK+YLEE+CKPKCVKPLLEYQACVKRIQGDESGHKHCTGQ
Sbjct: 41  YDIVDVGLFVFCMADEEPVDQKKYLEESCKPKCVKPLLEYQACVKRIQGDESGHKHCTGQ 100

Query: 71  YFDYWSCIDKCVAPKLFTKLK 92
           YFDYWSC+DKCVAPKLF KLK
Sbjct: 101 YFDYWSCVDKCVAPKLFPKLK 121

[Close]
BLAST of Cp4.1LG14g04110 vs. TrEMBL
Match: A0A0A0L6I2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G212480 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 4.1e-34
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 1 

Query: 23  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCV 82
           +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCV
Sbjct: 60  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 119

Query: 83  APKLFTKLK 92
           APKL TKLK
Sbjct: 120 APKLLTKLK 128

[Close]
BLAST of Cp4.1LG14g04110 vs. TrEMBL
Match: B9H7R3_POPTR (Cytochrome b-c1 complex subunit 6 OS=Populus trichocarpa GN=POPTR_0005s21330g PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 5.4e-34
Identity = 65/69 (94.20%), Postives = 68/69 (98.55%), Query Frame = 1 

Query: 23 MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCV 82
          MADEEPVD K+YLEEACKPKCV+PLLEYQACVKRIQGDESGHKHCTGQYFDYWSC+DKCV
Sbjct: 1  MADEEPVDPKKYLEEACKPKCVRPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCV 60

Query: 83 APKLFTKLK 92
          APKLFTKLK
Sbjct: 61 APKLFTKLK 69

[Close]
BLAST of Cp4.1LG14g04110 vs. TrEMBL
Match: A0A0B2R3C6_GLYSO (Cytochrome b-c1 complex subunit 6 OS=Glycine soja GN=glysoja_011311 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.6e-33
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 1 

Query: 23 MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCV 82
          MADEEPVDQKRYLEE+CKPKCVKPLLEYQAC+KRI GDESG KHCTGQYFDYWSCIDKCV
Sbjct: 1  MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDESGQKHCTGQYFDYWSCIDKCV 60

Query: 83 APKLFTKLK 92
          APKLFTKLK
Sbjct: 61 APKLFTKLK 69

[Close]
BLAST of Cp4.1LG14g04110 vs. TrEMBL
Match: C6SZG8_SOYBN (Cytochrome b-c1 complex subunit 6 OS=Glycine max GN=GLYMA_08G181800 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.6e-33
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 1 

Query: 23 MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCV 82
          MADEEPVDQKRYLEE+CKPKCVKPLLEYQAC+KRI GDESG KHCTGQYFDYWSCIDKCV
Sbjct: 1  MADEEPVDQKRYLEESCKPKCVKPLLEYQACIKRIHGDESGQKHCTGQYFDYWSCIDKCV 60

Query: 83 APKLFTKLK 92
          APKLFTKLK
Sbjct: 61 APKLFTKLK 69

[Close]
BLAST of Cp4.1LG14g04110 vs. TAIR10
Match: AT1G15120.2 (AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein)

HSP 1 Score: 124.8 bits (312), Expect = 2.7e-29
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 1 

Query: 23  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKC 82
           MAD+E VD K+YLEE+CKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYW CIDKC
Sbjct: 68  MADDEVVDPKKYLEESCKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWQCIDKC 126

[Close]
BLAST of Cp4.1LG14g04110 vs. TAIR10
Match: AT2G01090.1 (AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein)

HSP 1 Score: 123.2 bits (308), Expect = 8.0e-29
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 1 

Query: 23 MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCV 82
          M +E+ VDQKRY EE+CKPKCVKPLLEYQACVKRIQ DESGHKHCTGQYFDYW C+DKCV
Sbjct: 1  MPEEDVVDQKRYFEESCKPKCVKPLLEYQACVKRIQDDESGHKHCTGQYFDYWHCVDKCV 60

Query: 83 A 84
          +
Sbjct: 61 S 61

[Close]
BLAST of Cp4.1LG14g04110 vs. NCBI nr
Match: gi|659112182|ref|XP_008456103.1| (PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 5.4e-35
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 1 

Query: 23 MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCV 82
          MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCV
Sbjct: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60

Query: 83 APKLFTKLK 92
          APKLFTKLK
Sbjct: 61 APKLFTKLK 69

[Close]
BLAST of Cp4.1LG14g04110 vs. NCBI nr
Match: gi|449445858|ref|XP_004140689.1| (PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 2.7e-34
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 1 

Query: 23 MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCV 82
          MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCV
Sbjct: 1  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 60

Query: 83 APKLFTKLK 92
          APKL TKLK
Sbjct: 61 APKLLTKLK 69

[Close]
BLAST of Cp4.1LG14g04110 vs. NCBI nr
Match: gi|596114380|ref|XP_007221592.1| (hypothetical protein PRUPE_ppa017907mg [Prunus persica])

HSP 1 Score: 152.9 bits (385), Expect = 2.7e-34
Identity = 66/81 (81.48%), Postives = 71/81 (87.65%), Query Frame = 1 

Query: 11  YSFAPSQYYLLAMADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQ 70
           Y       ++  MADEEPVDQK+YLEE+CKPKCVKPLLEYQACVKRIQGDESGHKHCTGQ
Sbjct: 41  YDIVDVGLFVFCMADEEPVDQKKYLEESCKPKCVKPLLEYQACVKRIQGDESGHKHCTGQ 100

Query: 71  YFDYWSCIDKCVAPKLFTKLK 92
           YFDYWSC+DKCVAPKLF KLK
Sbjct: 101 YFDYWSCVDKCVAPKLFPKLK 121

[Close]
BLAST of Cp4.1LG14g04110 vs. NCBI nr
Match: gi|700202422|gb|KGN57555.1| (hypothetical protein Csa_3G212480 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 6.0e-34
Identity = 66/69 (95.65%), Postives = 68/69 (98.55%), Query Frame = 1 

Query: 23  MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCV 82
           +ADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGD+SGHKHCTGQYFDYWSCIDKCV
Sbjct: 60  LADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDDSGHKHCTGQYFDYWSCIDKCV 119

Query: 83  APKLFTKLK 92
           APKL TKLK
Sbjct: 120 APKLLTKLK 128

[Close]
BLAST of Cp4.1LG14g04110 vs. NCBI nr
Match: gi|645223858|ref|XP_008218833.1| (PREDICTED: cytochrome b-c1 complex subunit 6 [Prunus mume])

HSP 1 Score: 151.4 bits (381), Expect = 7.8e-34
Identity = 65/69 (94.20%), Postives = 68/69 (98.55%), Query Frame = 1 

Query: 23 MADEEPVDQKRYLEEACKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCIDKCV 82
          MADEEPVDQK+YLEE+CKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSC+DKCV
Sbjct: 1  MADEEPVDQKKYLEESCKPKCVKPLLEYQACVKRIQGDESGHKHCTGQYFDYWSCVDKCV 60

Query: 83 APKLFTKLK 92
          APKLF KLK
Sbjct: 61 APKLFPKLK 69

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g04110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
QCR6_SOLTU9.2e-2775.36Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2[more]
QCR6_DICDI1.6e-0744.83Probable cytochrome b-c1 complex subunit 6 OS=Dictyostelium discoideum GN=uqcrh ... [more]
BLAST of Cp4.1LG14g04110 vs. TrEMBL
Match NameE-valueIdentityDescription
M5XBF4_PRUPE1.9e-3481.48Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017907mg PE=4 SV=1[more]
A0A0A0L6I2_CUCSA4.1e-3495.65Uncharacterized protein OS=Cucumis sativus GN=Csa_3G212480 PE=4 SV=1[more]
B9H7R3_POPTR5.4e-3494.20Cytochrome b-c1 complex subunit 6 OS=Populus trichocarpa GN=POPTR_0005s21330g PE... [more]
A0A0B2R3C6_GLYSO1.6e-3394.20Cytochrome b-c1 complex subunit 6 OS=Glycine soja GN=glysoja_011311 PE=3 SV=1[more]
C6SZG8_SOYBN1.6e-3394.20Cytochrome b-c1 complex subunit 6 OS=Glycine max GN=GLYMA_08G181800 PE=2 SV=1[more]
BLAST of Cp4.1LG14g04110 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G15120.22.7e-2988.14 Ubiquinol-cytochrome C reductase hinge protein[more]
AT2G01090.18.0e-2983.61 Ubiquinol-cytochrome C reductase hinge protein[more]
BLAST of Cp4.1LG14g04110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659112182|ref|XP_008456103.1|5.4e-3598.55PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis melo][more]
gi|449445858|ref|XP_004140689.1|2.7e-3497.10PREDICTED: cytochrome b-c1 complex subunit 6 [Cucumis sativus][more]
gi|596114380|ref|XP_007221592.1|2.7e-3481.48hypothetical protein PRUPE_ppa017907mg [Prunus persica][more]
gi|700202422|gb|KGN57555.1|6.0e-3495.65hypothetical protein Csa_3G212480 [Cucumis sativus][more]
gi|645223858|ref|XP_008218833.1|7.8e-3494.20PREDICTED: cytochrome b-c1 complex subunit 6 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008121ubiquinol-cytochrome-c reductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006122mitochondrial electron transport, ubiquinol to cytochrome c
Vocabulary: INTERPRO
TermDefinition
IPR023184Ubol_cytC_Rdtase_hinge_dom
IPR003422Cyt_b-c1_6
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c
biological_process GO:0009060 aerobic respiration
biological_process GO:0015992 proton transport
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0070469 respiratory chain
cellular_component GO:0045275 respiratory chain complex III
cellular_component GO:0005750 mitochondrial respiratory chain complex III
molecular_function GO:0008121 ubiquinol-cytochrome-c reductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g04110.1Cp4.1LG14g04110.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003422Cytochrome b-c1 complex, subunit 6PANTHERPTHR15336UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEINcoord: 18..91
score: 2.1
IPR023184Ubiquinol-cytochrome C reductase hinge domainGENE3DG3DSA:1.10.287.20coord: 25..91
score: 1.6
IPR023184Ubiquinol-cytochrome C reductase hinge domainPFAMPF02320UCR_hingecoord: 30..91
score: 3.2
IPR023184Ubiquinol-cytochrome C reductase hinge domainunknownSSF81531Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 23..91
score: 7.19
NoneNo IPR availablePANTHERPTHR15336:SF2SUBFAMILY NOT NAMEDcoord: 18..91
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g04110CmaCh16G003670Cucurbita maxima (Rimu)cmacpeB344
Cp4.1LG14g04110CmaCh04G005070Cucurbita maxima (Rimu)cmacpeB715
Cp4.1LG14g04110CmoCh16G003920Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g04110CmoCh04G005450Cucurbita moschata (Rifu)cmocpeB668
Cp4.1LG14g04110Csa3G212480Cucumber (Chinese Long) v2cpecuB205
Cp4.1LG14g04110MELO3C019495Melon (DHL92) v3.5.1cpemeB192
Cp4.1LG14g04110ClCG05G009840Watermelon (Charleston Gray)cpewcgB208
Cp4.1LG14g04110CSPI03G18710Wild cucumber (PI 183967)cpecpiB208
Cp4.1LG14g04110Lsi05G001970Bottle gourd (USVL1VR-Ls)cpelsiB177
Cp4.1LG14g04110MELO3C019495.2Melon (DHL92) v3.6.1cpemedB234
Cp4.1LG14g04110CsaV3_3G018780Cucumber (Chinese Long) v3cpecucB0247
Cp4.1LG14g04110Bhi01G001240Wax gourdcpewgoB0295
Cp4.1LG14g04110CsGy3G018560Cucumber (Gy14) v2cgybcpeB317
Cp4.1LG14g04110Carg11295Silver-seed gourdcarcpeB0926
Cp4.1LG14g04110Carg08176Silver-seed gourdcarcpeB0523
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG14g04110Cp4.1LG01g02120Cucurbita pepo (Zucchini)cpecpeB234
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g04110Cucumber (Chinese Long) v3cpecucB0261
Cp4.1LG14g04110Cucumber (Gy14) v1cgycpeB0593
Cp4.1LG14g04110Cucurbita maxima (Rimu)cmacpeB114
Cp4.1LG14g04110Cucurbita moschata (Rifu)cmocpeB092
Cp4.1LG14g04110Wild cucumber (PI 183967)cpecpiB233
Cp4.1LG14g04110Cucumber (Chinese Long) v2cpecuB217
Cp4.1LG14g04110Cucumber (Chinese Long) v2cpecuB230
Cp4.1LG14g04110Bottle gourd (USVL1VR-Ls)cpelsiB171
Cp4.1LG14g04110Watermelon (Charleston Gray)cpewcgB205
Cp4.1LG14g04110Watermelon (97103) v1cpewmB228
Cp4.1LG14g04110Watermelon (97103) v1cpewmB233
Cp4.1LG14g04110Melon (DHL92) v3.5.1cpemeB182