MELO3C006116.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C006116.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPeptidyl-prolyl cis-trans isomerase
Locationchr06 : 1163826 .. 1166273 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTAAACTAAAATGCTAACATAAACTTTCTTCTCGTAATAAAAGAAATATATATATATATATATAAGGGGTTTAAAGCGGTTAAAGAGGAATCGCGATTTCTCCTCCGTTCGAGCAATTGATTACAAATTGAGAGGTCGAATTGATACAAAAATGGTGAATCAGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTTTTAACCGCCGATTATGGTCCTCAGCCCAATTTTCTCGATCCTGTGAGTCCTCTATCCATCTCTCCTTAAAAAATTTTCATTGTCTGTTTGGTCGCCGAGAAAATCCATGGAAAAAACCACTGAGATCTTGGATTTTTAGTACGCCAGTTTCTTCTTACTATTCAGCAACCTAGGGATTGTTATCGTGCAAATGTAACGCGGATTTGTTTGTAGAGTTTATTTGTCTTATCCGTATTCTTTCCAAGTGGAAATTAAATTGCGTTTGCAATGGCTTGGATTTTTAATCGGTTATTCTGTTATTCGTGTCGTGTAGTTCAAGCTCTGTGATTCTTGGATTTCCAGTCGTATTTTATTCTGTTATTGTTCGTAATTTTTGTTGACAGTGTAGAATTTGTTGTTTATTATGCTTAGGGCTTGAATTAAGTGTGGAGAACCTATGTTATTTTCTAAATTCTTCGTCGGTCCTGTTTTCCTCGCTAAATTGACAGTTGTTTAACGCGATCTGTGTGTAGTTTATGATAAGTTATCGTGTTGTAAATTTGTTGAGGCTTTAACTCTACATTACATTGAGCTTAATTAAATGAAATTTTTTACTTCCAGTACATTGTCAAATCGATAAAAAAAAAATATTACGTTCATCTGATGATTCTGATCCATAATAAGAACAATCTTTAGTTTGTGGTTTCATGAATGGCTAATTACCATTCGTTATAGTGTTTAATTTTTGAGTATCACTTCCAATGAAGTTCATGTCTTGCTAGAATTGTCTGTTACTGATGATTTCTTGCTATTGCAGTAAGATATGAGAACTAAGAGTAAAGATTGAAGTTTCCCTTTCTATTACAGTCAGAAGCTAGAAGAGTCATTTAACTAATGAAAATTATAAGTTGAATTGAGAAGTCATTAGGGTTCTGCTTCTACTTATAATAAACAACTGAAAAGCAAGTTATTTACTAGTTACAACACAGGAAAATCTTATGCTCTGATGAATCTTTGTGCATAAATACCTATAAATTAGGCTCCGTTTGGTAACTATTTGATTTTACGTTATTAGTGCTTGAAAATTAAGCATATAAACATTACTTTCTTCGTCGTGTGGTCTAGAGAATTTTAGATTGTTTTCAAAATCAAAGTCCTTTCCATAACCTTGTTTATGTTTTTGAAAATTGGCTGAGAATTCACATGTTCATATAGGAATTATGAGAATCCTAAAGTAAGAAATCACTCGAAAACAAGCACAGTTGTCAAAAACTAAAAACAGAATGATTACTAAACGGGTCCCTAATATTCTATCAGATTTTATACTTTTGATTGGTGTTTGATCGAATTTCCAGATGTCAAGAAGATTGTACATATAGTTTTGAATTCTAATGGCCTAATCTGGGAATGGCAGGTCAAAAAGATTATACTGTCAGCAGAAAGTTCGATAAAGGGCTTCATCTTTGGATCAAATAATCAATCTCAAGAAGGTCAAAGAGAGAAGCTCGGCTCAAATGGCGTCAAGGACAATGCATGATAAGTAGACTTCAAGGACTTGGTTACGAATTTATGTATATATATCTTGAATCTGCAGTTTTTTGTTATACATTTCCTAAAGCTTAGGTTGATATCAAGCGTGGGTAAACCTTTTGGAGGAGTAAAATAATGCAGTTTGTTTAGACTTTAAGATGTTTAAGGAATTGGTTCTGACCAAACCCATTTAGCATATTAACCTCAGAGATTCAAATTAGTTGAAGCATATTCCTGGATCGGTGTAGGGTTCTCCACATCAGTACCCTTCTAAAAATAAGGTCGAATCTATCTGACATTAGTATGGGATTCACTATTTAGGAAGCAACTCTTTATCGTGAGAACAAAGAGGAGGGTATGGTAACTCCGTGAAAGTGGAATGCTTGCTGAGATGGATTCTCTCTCCATTTCTGTTGTCACTAATTCTTGTTTGGAGTGAGAATTCGAACAATAGGAGGAAGTGTGATATTTATTTAATTGCCAACCTGATATGCTCATCGACCATAATTTGTTTTATATGATTTCTGGAATGTTGAAATTTTAGCCTTGTACTAGTGACCGTTTGTTTATTTTTTTTTTTCAAAGAACTTAAAAACAAAGTTAAGTTACAATAAAAATAACCATTTGATAATATACCAATCAACTATTTTAAAATCATTTATGGATTAAATAGATACAAACATTTCATCCAAACCTTAAAATTTGAATATAA

mRNA sequence

ACTAAACTAAAATGCTAACATAAACTTTCTTCTCGTAATAAAAGAAATATATATATATATATATAAGGGGTTTAAAGCGGTTAAAGAGGAATCGCGATTTCTCCTCCGTTCGAGCAATTGATTACAAATTGAGAGGTCGAATTGATACAAAAATGGTGAATCAGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTTTTAACCGCCGATTATGGTCCTCAGCCCAATTTTCTCGATCCTGTCAAAAAGATTATACTGTCAGCAGAAAGTTCGATAAAGGGCTTCATCTTTGGATCAAATAATCAATCTCAAGAAGGTCAAAGAGAGAAGCTCGGCTCAAATGGCGTCAAGGACAATGCATGATAAGTAGACTTCAAGGACTTGGTTACGAATTTATGTATATATATCTTGAATCTGCAGTTTTTTGTTATACATTTCCTAAAGCTTAGGTTGATATCAAGCGTGGGTAAACCTTTTGGAGGAGTAAAATAATGCAGTTTGTTTAGACTTTAAGATGTTTAAGGAATTGGTTCTGACCAAACCCATTTAGCATATTAACCTCAGAGATTCAAATTAGTTGAAGCATATTCCTGGATCGGTGTAGGGTTCTCCACATCAGTACCCTTCTAAAAATAAGGTCGAATCTATCTGACATTAGTATGGGATTCACTATTTAGGAAGCAACTCTTTATCGTGAGAACAAAGAGGAGGGTATGGTAACTCCGTGAAAGTGGAATGCTTGCTGAGATGGATTCTCTCTCCATTTCTGTTGTCACTAATTCTTGTTTGGAGTGAGAATTCGAACAATAGGAGGAAGTGTGATATTTATTTAATTGCCAACCTGATATGCTCATCGACCATAATTTGTTTTATATGATTTCTGGAATGTTGAAATTTTAGCCTTGTACTAGTGACCGTTTGTTTATTTTTTTTTTTCAAAGAACTTAAAAACAAAGTTAAGTTACAATAAAAATAACCATTTGATAATATACCAATCAACTATTTTAAAATCATTTATGGATTAAATAGATACAAACATTTCATCCAAACCTTAAAATTTGAATATAA

Coding sequence (CDS)

ATGGTGAATCAGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTTTTAACCGCCGATTATGGTCCTCAGCCCAATTTTCTCGATCCTGTCAAAAAGATTATACTGTCAGCAGAAAGTTCGATAAAGGGCTTCATCTTTGGATCAAATAATCAATCTCAAGAAGGTCAAAGAGAGAAGCTCGGCTCAAATGGCGTCAAGGACAATGCATGA

Protein sequence

MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNNQSQEGQREKLGSNGVKDNA
BLAST of MELO3C006116.2 vs. NCBI nr
Match: XP_008438057.1 (PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 1.5e-34
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60
          MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60

Query: 61 QSQEGQREKLGSNGVKDNA 80
          QSQEGQREKLGSNGVKDNA
Sbjct: 61 QSQEGQREKLGSNGVKDNA 79

BLAST of MELO3C006116.2 vs. NCBI nr
Match: XP_011650756.1 (PREDICTED: uncharacterized protein LOC105434815 [Cucumis sativus] >KGN56522.1 hypothetical protein Csa_3G122460 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-34
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60
          MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKK+ILSAESSIKGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKVILSAESSIKGFIFGSNN 60

Query: 61 QSQEGQREKLGSNGVKDNA 80
          QSQEGQREKLGSNGVKDNA
Sbjct: 61 QSQEGQREKLGSNGVKDNA 79

BLAST of MELO3C006116.2 vs. NCBI nr
Match: XP_022147242.1 (uncharacterized protein LOC111016239 [Momordica charantia])

HSP 1 Score: 142.5 bits (358), Expect = 6.1e-31
Identity = 71/77 (92.21%), Postives = 74/77 (96.10%), Query Frame = 0

Query: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP++K ILSAESS+KGFIFGSNN
Sbjct: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIQKFILSAESSVKGFIFGSNN 60

Query: 61 QSQEGQREKLGSNGVKD 78
          QSQE QREKLGSNGVKD
Sbjct: 61 QSQESQREKLGSNGVKD 77

BLAST of MELO3C006116.2 vs. NCBI nr
Match: XP_022924545.1 (uncharacterized protein LOC111431996 [Cucurbita moschata] >XP_022980455.1 uncharacterized protein LOC111479819 [Cucurbita maxima] >XP_023529151.1 uncharacterized protein LOC111791881 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.8 bits (351), Expect = 3.9e-30
Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 0

Query: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILS ESSIKGFIFGSNN
Sbjct: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60

Query: 61 QSQEGQREKLGSNGVKDN 79
          QSQ  Q EKLGSNGVKDN
Sbjct: 61 QSQGSQSEKLGSNGVKDN 78

BLAST of MELO3C006116.2 vs. NCBI nr
Match: XP_015867370.1 (uncharacterized protein LOC107404888 [Ziziphus jujuba])

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-22
Identity = 57/76 (75.00%), Postives = 65/76 (85.53%), Query Frame = 0

Query: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60
          M+  +TDKL+RRT MVATVTASYFL+TADYGPQPN LDP+KK ILSAESS+K FIFGSNN
Sbjct: 1  MLKPQTDKLVRRTAMVATVTASYFLITADYGPQPNALDPIKKAILSAESSVKEFIFGSNN 60

Query: 61 QSQEGQREKLGSNGVK 77
          QS+E + EKLGS   K
Sbjct: 61 QSEESEIEKLGSESAK 76

BLAST of MELO3C006116.2 vs. TAIR10
Match: AT4G00530.1 (unknown protein)

HSP 1 Score: 84.7 bits (208), Expect = 2.7e-17
Identity = 38/60 (63.33%), Postives = 49/60 (81.67%), Query Frame = 0

Query: 2  VNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNNQ 61
          +N +TDK++RRTTMVAT  ASYFLLT DYGP+PN LDP+K+ IL+A+ S+K FIFG   +
Sbjct: 1  MNPQTDKVVRRTTMVATAVASYFLLTGDYGPEPNVLDPIKRKILAAQDSVKQFIFGPKGE 60

BLAST of MELO3C006116.2 vs. TAIR10
Match: AT1G01725.1 (unknown protein)

HSP 1 Score: 70.9 bits (172), Expect = 4.1e-13
Identity = 32/62 (51.61%), Postives = 47/62 (75.81%), Query Frame = 0

Query: 2  VNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNNQ 61
          +N + +K+++ T++VAT   SYFLLTADYGP+PN LDP+++ ILSA+ S+K FIF S   
Sbjct: 1  MNPQIEKVVKVTSVVATAVVSYFLLTADYGPEPNALDPIRQRILSAQDSVKEFIFPSKKS 60

Query: 62 SQ 64
           +
Sbjct: 61 DK 62

BLAST of MELO3C006116.2 vs. TrEMBL
Match: tr|A0A1S3AW35|A0A1S3AW35_CUCME (uncharacterized protein LOC103483279 OS=Cucumis melo OX=3656 GN=LOC103483279 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-34
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60
          MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60

Query: 61 QSQEGQREKLGSNGVKDNA 80
          QSQEGQREKLGSNGVKDNA
Sbjct: 61 QSQEGQREKLGSNGVKDNA 79

BLAST of MELO3C006116.2 vs. TrEMBL
Match: tr|A0A0A0L7H0|A0A0A0L7H0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122460 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-34
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0

Query: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60
          MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKK+ILSAESSIKGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKVILSAESSIKGFIFGSNN 60

Query: 61 QSQEGQREKLGSNGVKDNA 80
          QSQEGQREKLGSNGVKDNA
Sbjct: 61 QSQEGQREKLGSNGVKDNA 79

BLAST of MELO3C006116.2 vs. TrEMBL
Match: tr|A0A2P5F2N8|A0A2P5F2N8_9ROSA (UvrABC system protein A OS=Trema orientalis OX=63057 GN=TorRG33x02_121350 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-22
Identity = 57/76 (75.00%), Postives = 66/76 (86.84%), Query Frame = 0

Query: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60
          M+N +TDKL+RRTTMVAT+TASYFLLTADYGP+PN LDPVKK I SAES++K +IFGS +
Sbjct: 1  MMNPQTDKLVRRTTMVATITASYFLLTADYGPEPNALDPVKKAIQSAESTVKEYIFGSKD 60

Query: 61 QSQEGQREKLGSNGVK 77
          QSQE Q EKLGSN  K
Sbjct: 61 QSQESQVEKLGSNSPK 76

BLAST of MELO3C006116.2 vs. TrEMBL
Match: tr|A0A2P5B2M6|A0A2P5B2M6_PARAD (UvrABC system protein A OS=Parasponia andersonii OX=3476 GN=PanWU01x14_277090 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-21
Identity = 56/76 (73.68%), Postives = 65/76 (85.53%), Query Frame = 0

Query: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60
          M+N +TDKL+RRTTMVAT+TASYFLLTADYGP+PN LDPVKK I SAES++K +IFGS +
Sbjct: 1  MMNPQTDKLVRRTTMVATITASYFLLTADYGPEPNALDPVKKAIRSAESTVKEYIFGSKD 60

Query: 61 QSQEGQREKLGSNGVK 77
          QSQE Q  KLGSN  K
Sbjct: 61 QSQESQVGKLGSNSPK 76

BLAST of MELO3C006116.2 vs. TrEMBL
Match: tr|A0A059CJG1|A0A059CJG1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D02283 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.6e-19
Identity = 47/66 (71.21%), Postives = 59/66 (89.39%), Query Frame = 0

Query: 1   MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60
           M+N RTDKL+RRTTMVAT+TA+YFLLTADYGP+PN LDP+KK ILSAE+ +KGF+FGS+ 
Sbjct: 73  MMNPRTDKLVRRTTMVATITAAYFLLTADYGPEPNALDPIKKAILSAENRVKGFVFGSSE 132

Query: 61  QSQEGQ 67
           + +E Q
Sbjct: 133 KPRESQ 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008438057.11.5e-34100.00PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo][more]
XP_011650756.12.0e-3498.73PREDICTED: uncharacterized protein LOC105434815 [Cucumis sativus] >KGN56522.1 hy... [more]
XP_022147242.16.1e-3192.21uncharacterized protein LOC111016239 [Momordica charantia][more]
XP_022924545.13.9e-3091.03uncharacterized protein LOC111431996 [Cucurbita moschata] >XP_022980455.1 unchar... [more]
XP_015867370.11.0e-2275.00uncharacterized protein LOC107404888 [Ziziphus jujuba][more]
Match NameE-valueIdentityDescription
AT4G00530.12.7e-1763.33unknown protein[more]
AT1G01725.14.1e-1351.61unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3AW35|A0A1S3AW35_CUCME1.0e-34100.00uncharacterized protein LOC103483279 OS=Cucumis melo OX=3656 GN=LOC103483279 PE=... [more]
tr|A0A0A0L7H0|A0A0A0L7H0_CUCSA1.3e-3498.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122460 PE=4 SV=1[more]
tr|A0A2P5F2N8|A0A2P5F2N8_9ROSA1.5e-2275.00UvrABC system protein A OS=Trema orientalis OX=63057 GN=TorRG33x02_121350 PE=4 S... [more]
tr|A0A2P5B2M6|A0A2P5B2M6_PARAD1.0e-2173.68UvrABC system protein A OS=Parasponia andersonii OX=3476 GN=PanWU01x14_277090 PE... [more]
tr|A0A059CJG1|A0A059CJG1_EUCGR4.6e-1971.21Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D02283 PE=4 SV... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016853 isomerase activity
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006116.2.1MELO3C006116.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..79
NoneNo IPR availablePANTHERPTHR37696FAMILY NOT NAMEDcoord: 2..70

The following gene(s) are paralogous to this gene:

None