Carg21007 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCTCCGTCGAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCCTCATACTTTCTCTTAACCGCCGATTATGGCCCTCAACCCAATTTTCTCGATCCTGTGAGTTCTCTAGGCATCTCTCCCTCAAATTTTTTATTATCTGTCTGGTTCGAAAAAGTAGGATCTTGGATCTTATGTAGGTTAGTTTCTTTTTACTATTCAGCAACCCAGGGATTGTTATCGTGCCATTGACGCGGATTTGTTGGTGTTCTTTTGTCTGTCTTTTTCTGATGTGATTTCTGTTTGTCTATTATGGATTCTGTTATCTAGACATTGATGAACTTCCTCTTCTCTGTATTCTTTTCAAGCGAAAAATGAATTGCTTTTGCAGTGACTTCGTTTCTTAATCAATTTTTCTTTTTATGCAACTCGTATAGTGTAGTTCAAGCTCTTAGATTTCCAATCATATTTTACTCGCTTATTGTTCTTAATTTTTGTTGCCAGTGTATTTGTTGTCGTATATTTCGCCTTGTACTTGATTTGACGTGTAGAACCTAGGTTTTCTACATTCTTCGTCGGTCTTGTTTTCCTTGCTAAATTTACCATTGTTTAACACGATTTATGTTTAGTTTATGAAATTTTCATCCTTTGTGTTATAAATTTGTTGAGGCTTTAACATTTCAATACACTGAGTTTAAATTAGATGGAAAATTTCCTTCCAATACGTTGTCAAATTGCTGAGAGTGCACATATACGTTCATCTGATCTCTTACAACAATCTGAAGTTTGTAGGTTTATGAGTTGCTAATTACCCTTTGTTCTTGTTTTTGAGTCATCACTTTCAATGAAATTTATACCTTGCTAGATTTATCTGTCGCTCATAATTTCTTGATATTGAAGTGAGACATGAGAACTAAGAGTAAAGAGTGAAGTTTCCCTTTCTATTCAGTTAGAAGCAAGAAGACTTGGTATTTAGCAAATTAATAACACAAGTTTAGGTGACAATTAACATGGTTTTACTTCTACATATGGTTTGGAATCATGACTCTTCACAATGGTATGATATTATCCACTTTGAGCATAAGCTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGGTCTCATACCAATGGAGAGAGACTCACTACCAATAATTCTCAACAATCCTCCCCTCAAACAAAGTACACTATAAGCCTCCCCTGAGGCTTATGGAGCTCTCGAATAGTCTCCCCTTAATCGAGACTCGACTCCTTTCTCTGGAGCCCTCAAACAAAGTACACCCTTTGTTTGACACTTTAGTCACTTTTGACTACACCTTCGAGGCTCACAATTCTTTGTTCGATATTTGAGGATTCTTTTGACATAGTTAAGTTTAGGGCATGACTCTGATACCATGTTTGGAATCACGAGTCTCCAGAATGGTATGATATTGTCCACTTTGAGAATAAGTTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGGAGAGGGACTCACTCCCAATAATCCTCAACACATATAGTTAACAACTGGACGGCACTAGACATTTTAGTTATTTGCCATAATCATATCTTATTGATCTACCGGTTTTTATATGCTTGATTGGTGTTCGATCGAATTTTCAGATGTCTAGAAGATTGTCCATATTGTTCTGAGTTCTAATGGCCTAATTTGGAATGGCAGATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGGTGTCAAGGACAATCCATGATGCGTAGACTCGAGGATTTGGTTACGGTTTTATGCATACATATCTTGAATCTGCAGTTTTTGTTTATACATTTCGTGAAGCGTAGGTCGAGATCAAGCATGAGTATACCTCTTGGAGGAGACGAATAATGCAGTTTGTTAGATTCAAAGGTGTCGAATGAATTTGTTATTACCAACTTCATTTAGCATCTTAACCTCAAGAGATTCGAAGTACTTCGCATATTTTGGGATTGCTATGATATCACATCAAGTGGTTCTGAACTCCGGTAGAAAAAATGAACATTGCTCTGATTTAGGAACTTTAGAAGTGAAATGTGTGAGTCAGCCCAAGACCCCCACGGGAACGTGTTTTAAAACCGTGAGACTGACGGTGATACGTAACGAGTCAAAATGGACAATATTTGTTAACGTTGGGTTTGAGCTATTACAATTTTCCTATTCTATAC TCTTCTCCGTCGAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCCTCATACTTTCTCTTAACCGCCGATTATGGCCCTCAACCCAATTTTCTCGATCCTATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGGTGTCAAGGACAATCCATGATGCGTAGACTCGAGGATTTGGTTACGGTTTTATGCATACATATCTTGAATCTGCAGTTTTTGTTTATACATTTCGTGAAGCGTAGGTCGAGATCAAGCATGAGTATACCTCTTGGAGGAGACGAATAATGCAGTTTGTTAGATTCAAAGGTGTCGAATGAATTTGTTATTACCAACTTCATTTAGCATCTTAACCTCAAGAGATTCGAAGTACTTCGCATATTTTGGGATTGCTATGATATCACATCAAGTGGTTCTGAACTCCGGTAGAAAAAATGAACATTGCTCTGATTTAGGAACTTTAGAAGTGAAATGTGTGAGTCAGCCCAAGACCCCCACGGGAACGTGTTTTAAAACCGTGAGACTGACGGTGATACGTAACGAGTCAAAATGGACAATATTTGTTAACGTTGGGTTTGAGCTATTACAATTTTCCTATTCTATAC ATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCCTCATACTTTCTCTTAACCGCCGATTATGGCCCTCAACCCAATTTTCTCGATCCTATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGGTGTCAAGGACAATCCATGA MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP
BLAST of Carg21007 vs. NCBI nr
Match: XP_022924545.1 (uncharacterized protein LOC111431996 [Cucurbita moschata] >XP_022980455.1 uncharacterized protein LOC111479819 [Cucurbita maxima] >XP_023529151.1 uncharacterized protein LOC111791881 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 155.6 bits (392), Expect = 7.0e-35 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Carg21007 vs. NCBI nr
Match: XP_022147242.1 (uncharacterized protein LOC111016239 [Momordica charantia]) HSP 1 Score: 144.4 bits (363), Expect = 1.6e-31 Identity = 73/79 (92.41%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Carg21007 vs. NCBI nr
Match: XP_008438057.1 (PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo]) HSP 1 Score: 138.7 bits (348), Expect = 8.8e-30 Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of Carg21007 vs. NCBI nr
Match: XP_011650756.1 (PREDICTED: uncharacterized protein LOC105434815 [Cucumis sativus] >KGN56522.1 hypothetical protein Csa_3G122460 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 1.1e-29 Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of Carg21007 vs. NCBI nr
Match: XP_015867370.1 (uncharacterized protein LOC107404888 [Ziziphus jujuba]) HSP 1 Score: 116.7 bits (291), Expect = 3.6e-23 Identity = 59/79 (74.68%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of Carg21007 vs. TAIR10
Match: AT4G00530.1 (unknown protein) HSP 1 Score: 87.8 bits (216), Expect = 3.2e-18 Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 0
BLAST of Carg21007 vs. TAIR10
Match: AT1G01725.1 (unknown protein) HSP 1 Score: 72.4 bits (176), Expect = 1.4e-13 Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 0
BLAST of Carg21007 vs. TrEMBL
Match: tr|A0A1S3AW35|A0A1S3AW35_CUCME (uncharacterized protein LOC103483279 OS=Cucumis melo OX=3656 GN=LOC103483279 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.8e-30 Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of Carg21007 vs. TrEMBL
Match: tr|A0A0A0L7H0|A0A0A0L7H0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122460 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 7.6e-30 Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of Carg21007 vs. TrEMBL
Match: tr|A0A2P5F2N8|A0A2P5F2N8_9ROSA (UvrABC system protein A OS=Trema orientalis OX=63057 GN=TorRG33x02_121350 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 9.0e-23 Identity = 57/79 (72.15%), Postives = 68/79 (86.08%), Query Frame = 0
BLAST of Carg21007 vs. TrEMBL
Match: tr|A0A2P5B2M6|A0A2P5B2M6_PARAD (UvrABC system protein A OS=Parasponia andersonii OX=3476 GN=PanWU01x14_277090 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.8e-22 Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of Carg21007 vs. TrEMBL
Match: tr|A0A2G9G3S3|A0A2G9G3S3_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_27535 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.2e-19 Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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