Cla97C05G081980 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G081980
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Peptidyl-prolyl cis-trans isomerase
Location	Cla97Chr05 : 1525334 .. 1526996 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAATCGGCGAACGGACAAGTTGCTGAGAAGAACAACAATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACCGCCGATTATGGCCCTGAACCCAATTTTCTTGATCCTGTGAGTCCTCTAAACATCTCTCCCTTAAAATTTGTATTATCTGTTTGGTCGCCGAGAAAATTCATGGAAATATGCACTAGAATCTTGGATTTCAGTACGCCAGTTTCTTTTTACTATTCAGCAACCTAGGGATTGTTATTGTGCAATGTAACGCGGATTTGTTTGTACAGTTTATCTGTCTGTGTTGTTTTTTCCACTGTGTTTTCCTTTATCGAGTCATTGATGAACTTCCTCTTATATGTATTCTTTTCAAGTGAAAAGTGAATTGCGTCTGCAGTGGCTTTGCTTTTGGATCGATTTTTCTTTTTATGCATGTCGTGTAGTGTAGTTCAAGCTTTGTGGCTCTTGGCTTTCCTTTCGTATTTTATTCAGTTATTGTTCTTAATTTTTGTTGACAGTGTATAAGTCGTTGTATATTTCGCCTTGTACTTGATTTTAGAGCGTAGAACCTAGGATTTTTCTAAATTCTTCGTTGGTCCTGTTTTCCTTGCTAAACAATTAGTTAACACGATCTATTTTTAGTTTATGATAATTTCATCTATCGTGTTGTAAATTTGTCGAGGGTTTAACTTTTCGTTACATTGAGCTTTAATTAGATAAAAAAATTTCATTCGAGTACCTTGTCAAATTGATCAGAAAAATTATATACGTTCATCTAATCTGTAATAAGAACAATCTGTACCTTGTGGTTTCATGAGTTGCTAATTACCATTTGTTATTTTGTTCGATTTTTGAGTCATCACTTTCAATGAAGTTTGTGTCTTGCTAGATTCGTCTGTCGTTGATAATTTCTTGCTATTACAGTGAGATATGAGAACCAAGAGTAAGGAGTGAAATTTCTCTTTCTATTCACAGTCAGAAGCAAGAAGACTTAGCATTTAGCAAATTAATAATATAAGTCGAATTGGGAAGTCATTATGGTTTTAACAACTGGAAAGCATGGACATTTCAGTTATTTACTAGGAAATCTTATGCTGTGATGAATCCCTATGCATAAAATAATTATAATTTAGGCCCGTTTGGTAACCATTTGGTTTTTTATTTTTATTTTTTTGAAAATTAAGCCTGTAAACATTACTTCCATCTATTGGTTTATATGTTTTCTAGTCTAGATTTTAGTAGTGTTTTCAAAATCAAAGCCATATTTTGAAAAAAAATAAAAAAAGAGTGCTCAAAAACTTGTTTGTGTTTTGGAAAATTGGCTAAGAATTCAAATATTTGTATAGGAAATAAAAAAACTATGAGTAACAACTTGTGAGAAAACAAACACAATTTTCAAAAGCAAAAAACGAAATGGTTGCCAAATGGGGCTTTATGATCTATCGGTTTTTATTTGCTTGATGGGTGTTTGATCAAATTTCCATCTGTCTAGAAGATTGTTCATATCGTTTTGAATTCTAAAGGCCTACTTTTGGGAATGCAGATCAAAAAGTTTATACTGTCAGCAGAAAGTTCTATCAAGGGTTTCATCTTTGGATCGAATAATCAATCTCAAGAAAGTCAAAAAGAGAAGCTCGGTTCCAATGGTGTCAAGGACAATCCATGA

mRNA sequence

ATGGTGAATCGGCGAACGGACAAGTTGCTGAGAAGAACAACAATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACCGCCGATTATGGCCCTGAACCCAATTTTCTTGATCCTATCAAAAAGTTTATACTGTCAGCAGAAAGTTCTATCAAGGGTTTCATCTTTGGATCGAATAATCAATCTCAAGAAAGTCAAAAAGAGAAGCTCGGTTCCAATGGTGTCAAGGACAATCCATGA

Coding sequence (CDS)

ATGGTGAATCGGCGAACGGACAAGTTGCTGAGAAGAACAACAATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACCGCCGATTATGGCCCTGAACCCAATTTTCTTGATCCTATCAAAAAGTTTATACTGTCAGCAGAAAGTTCTATCAAGGGTTTCATCTTTGGATCGAATAATCAATCTCAAGAAAGTCAAAAAGAGAAGCTCGGTTCCAATGGTGTCAAGGACAATCCATGA

Protein sequence

MVNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNNQSQESQKEKLGSNGVKDNP

Homology

[Close]

BLAST of Cla97C05G081980 vs. NCBI nr
Match: XP_022147242.1 (uncharacterized protein LOC111016239 [Momordica charantia])

HSP 1 Score: 145.2 bits (365), Expect = 9.4e-32
Identity = 73/79 (92.41%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1  MVNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGP+PNFLDPI+KFILSAESS+KGFIFGSNN
Sbjct: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIQKFILSAESSVKGFIFGSNN 60

Query: 61 QSQESQKEKLGSNGVKDNP 80
          QSQESQ+EKLGSNGVKD P
Sbjct: 61 QSQESQREKLGSNGVKDQP 79

[Close]

BLAST of Cla97C05G081980 vs. NCBI nr
Match: XP_022924545.1 (uncharacterized protein LOC111431996 [Cucurbita moschata] >XP_022980455.1 uncharacterized protein LOC111479819 [Cucurbita maxima] >XP_023529151.1 uncharacterized protein LOC111791881 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-31
Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MVNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGP+PNFLDPIKKFILS ESSIKGFIFGSNN
Sbjct: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60

Query: 61 QSQESQKEKLGSNGVKDNP 80
          QSQ SQ EKLGSNGVKDNP
Sbjct: 61 QSQGSQSEKLGSNGVKDNP 79

[Close]

BLAST of Cla97C05G081980 vs. NCBI nr
Match: XP_008438057.1 (PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo])

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-31
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MVNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNN 60
          MVN+RTDKLLRRTTMVATVTASYFLLTADYGP+PNFLDP+KK ILSAESSIKGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60

Query: 61 QSQESQKEKLGSNGVKDN 79
          QSQE Q+EKLGSNGVKDN
Sbjct: 61 QSQEGQREKLGSNGVKDN 78

[Close]

BLAST of Cla97C05G081980 vs. NCBI nr
Match: XP_011650756.1 (PREDICTED: uncharacterized protein LOC105434815 [Cucumis sativus] >KGN56522.1 hypothetical protein Csa_3G122460 [Cucumis sativus])

HSP 1 Score: 143.3 bits (360), Expect = 3.6e-31
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MVNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNN 60
          MVN+RTDKLLRRTTMVATVTASYFLLTADYGP+PNFLDP+KK ILSAESSIKGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKVILSAESSIKGFIFGSNN 60

Query: 61 QSQESQKEKLGSNGVKDN 79
          QSQE Q+EKLGSNGVKDN
Sbjct: 61 QSQEGQREKLGSNGVKDN 78

[Close]

BLAST of Cla97C05G081980 vs. NCBI nr
Match: PON92063.1 (UvrABC system protein A [Trema orientalis])

HSP 1 Score: 116.7 bits (291), Expect = 3.6e-23
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1  MVNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNN 60
          M+N +TDKL+RRTTMVAT+TASYFLLTADYGPEPN LDP+KK I SAES++K +IFGS +
Sbjct: 1  MMNPQTDKLVRRTTMVATITASYFLLTADYGPEPNALDPVKKAIQSAESTVKEYIFGSKD 60

Query: 61 QSQESQKEKLGSNGVKDNP 80
          QSQESQ EKLGSN  K +P
Sbjct: 61 QSQESQVEKLGSNSPKKHP 79

[Close]

BLAST of Cla97C05G081980 vs. TrEMBL
Match: tr|A0A1S3AW35|A0A1S3AW35_CUCME (uncharacterized protein LOC103483279 OS=Cucumis melo OX=3656 GN=LOC103483279 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-31
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MVNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNN 60
          MVN+RTDKLLRRTTMVATVTASYFLLTADYGP+PNFLDP+KK ILSAESSIKGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60

Query: 61 QSQESQKEKLGSNGVKDN 79
          QSQE Q+EKLGSNGVKDN
Sbjct: 61 QSQEGQREKLGSNGVKDN 78

[Close]

BLAST of Cla97C05G081980 vs. TrEMBL
Match: tr|A0A0A0L7H0|A0A0A0L7H0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122460 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.4e-31
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MVNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNN 60
          MVN+RTDKLLRRTTMVATVTASYFLLTADYGP+PNFLDP+KK ILSAESSIKGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKVILSAESSIKGFIFGSNN 60

Query: 61 QSQESQKEKLGSNGVKDN 79
          QSQE Q+EKLGSNGVKDN
Sbjct: 61 QSQEGQREKLGSNGVKDN 78

[Close]

BLAST of Cla97C05G081980 vs. TrEMBL
Match: tr|A0A2P5F2N8|A0A2P5F2N8_9ROSA (UvrABC system protein A OS=Trema orientalis OX=63057 GN=TorRG33x02_121350 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.4e-23
Identity = 59/79 (74.68%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1  MVNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNN 60
          M+N +TDKL+RRTTMVAT+TASYFLLTADYGPEPN LDP+KK I SAES++K +IFGS +
Sbjct: 1  MMNPQTDKLVRRTTMVATITASYFLLTADYGPEPNALDPVKKAIQSAESTVKEYIFGSKD 60

Query: 61 QSQESQKEKLGSNGVKDNP 80
          QSQESQ EKLGSN  K +P
Sbjct: 61 QSQESQVEKLGSNSPKKHP 79

[Close]

BLAST of Cla97C05G081980 vs. TrEMBL
Match: tr|A0A2P5B2M6|A0A2P5B2M6_PARAD (UvrABC system protein A OS=Parasponia andersonii OX=3476 GN=PanWU01x14_277090 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-22
Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 1  MVNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNN 60
          M+N +TDKL+RRTTMVAT+TASYFLLTADYGPEPN LDP+KK I SAES++K +IFGS +
Sbjct: 1  MMNPQTDKLVRRTTMVATITASYFLLTADYGPEPNALDPVKKAIRSAESTVKEYIFGSKD 60

Query: 61 QSQESQKEKLGSNGVKDNP 80
          QSQESQ  KLGSN  K +P
Sbjct: 61 QSQESQVGKLGSNSPKKHP 79

[Close]

BLAST of Cla97C05G081980 vs. TrEMBL
Match: tr|A0A059CJG1|A0A059CJG1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D02283 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-19
Identity = 50/66 (75.76%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 1   MVNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNN 60
           M+N RTDKL+RRTTMVAT+TA+YFLLTADYGPEPN LDPIKK ILSAE+ +KGF+FGS+ 
Sbjct: 73  MMNPRTDKLVRRTTMVATITAAYFLLTADYGPEPNALDPIKKAILSAENRVKGFVFGSSE 132

Query: 61  QSQESQ 67
           + +ESQ
Sbjct: 133 KPRESQ 138

[Close]

BLAST of Cla97C05G081980 vs. TAIR10
Match: AT4G00530.1 (unknown protein)

HSP 1 Score: 85.1 bits (209), Expect = 2.1e-17
Identity = 40/60 (66.67%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 2  VNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNNQ 61
          +N +TDK++RRTTMVAT  ASYFLLT DYGPEPN LDPIK+ IL+A+ S+K FIFG   +
Sbjct: 1  MNPQTDKVVRRTTMVATAVASYFLLTGDYGPEPNVLDPIKRKILAAQDSVKQFIFGPKGE 60

[Close]

BLAST of Cla97C05G081980 vs. TAIR10
Match: AT1G01725.1 (unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 3.1e-13
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 2  VNRRTDKLLRRTTMVATVTASYFLLTADYGPEPNFLDPIKKFILSAESSIKGFIFGSNNQ 61
          +N + +K+++ T++VAT   SYFLLTADYGPEPN LDPI++ ILSA+ S+K FIF S   
Sbjct: 1  MNPQIEKVVKVTSVVATAVVSYFLLTADYGPEPNALDPIRQRILSAQDSVKEFIFPSKKS 60

Query: 62 SQ 64
           +
Sbjct: 61 DK 62

The following BLAST results are available for this feature:

BLAST of Cla97C05G081980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147242.1	9.4e-32	92.41	uncharacterized protein LOC111016239 [Momordica charantia]	[more]
XP_022924545.1	1.6e-31	93.67	uncharacterized protein LOC111431996 [Cucurbita moschata] >XP_022980455.1 unchar...	[more]
XP_008438057.1	2.7e-31	92.31	PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo]	[more]
XP_011650756.1	3.6e-31	92.31	PREDICTED: uncharacterized protein LOC105434815 [Cucumis sativus] >KGN56522.1 hy...	[more]
PON92063.1	3.6e-23	74.68	UvrABC system protein A [Trema orientalis]	[more]

BLAST of Cla97C05G081980 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AW35\|A0A1S3AW35_CUCME	1.8e-31	92.31	uncharacterized protein LOC103483279 OS=Cucumis melo OX=3656 GN=LOC103483279 PE=...	[more]
tr\|A0A0A0L7H0\|A0A0A0L7H0_CUCSA	2.4e-31	92.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122460 PE=4 SV=1	[more]
tr\|A0A2P5F2N8\|A0A2P5F2N8_9ROSA	2.4e-23	74.68	UvrABC system protein A OS=Trema orientalis OX=63057 GN=TorRG33x02_121350 PE=4 S...	[more]
tr\|A0A2P5B2M6\|A0A2P5B2M6_PARAD	1.5e-22	73.42	UvrABC system protein A OS=Parasponia andersonii OX=3476 GN=PanWU01x14_277090 PE...	[more]
tr\|A0A059CJG1\|A0A059CJG1_EUCGR	1.6e-19	75.76	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_D02283 PE=4 SV...	[more]

BLAST of Cla97C05G081980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C05G081980 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00530.1	2.1e-17	66.67	unknown protein	[more]
AT1G01725.1	3.1e-13	54.84	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G081980.1	Cla97C05G081980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..79
None	No IPR available	PANTHER	PTHR37696	FAMILY NOT NAMED	coord: 2..70

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G081980	Csa3G122460	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G081980	MELO3C006116	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G081980	ClCG05G001590	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G081980	CSPI03G08840	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G081980	Cucsa.258310	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G081980	CmaCh14G020320	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G081980	Lsi05G020330	Bottle gourd (USVL1VR-Ls)	lsiwmbB333
Cla97C05G081980	CsGy3G008920	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G081980	MELO3C006116.2	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G081980	Carg21007	Silver-seed gourd	carwmbB0513
Cla97C05G081980	CsaV3_3G008980	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G081980	Bhi01G000261	Wax gourd	wgowmbB182

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G081980	Watermelon (97103) v2	wmbwmbB130
Cla97C05G081980	Silver-seed gourd	carwmbB0405
Cla97C05G081980	Silver-seed gourd	carwmbB0773
Cla97C05G081980	Silver-seed gourd	carwmbB1041
Cla97C05G081980	Cucumber (Gy14) v2	cgybwmbB216
Cla97C05G081980	Cucumber (Gy14) v1	cgywmbB524
Cla97C05G081980	Cucurbita maxima (Rimu)	cmawmbB344
Cla97C05G081980	Cucurbita maxima (Rimu)	cmawmbB429
Cla97C05G081980	Cucurbita maxima (Rimu)	cmawmbB856
Cla97C05G081980	Cucurbita maxima (Rimu)	cmawmbB861
Cla97C05G081980	Cucurbita moschata (Rifu)	cmowmbB243
Cla97C05G081980	Cucurbita moschata (Rifu)	cmowmbB410
Cla97C05G081980	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G081980	Cucurbita moschata (Rifu)	cmowmbB834
Cla97C05G081980	Wild cucumber (PI 183967)	cpiwmbB232
Cla97C05G081980	Cucumber (Chinese Long) v3	cucwmbB227
Cla97C05G081980	Cucumber (Chinese Long) v2	cuwmbB226
Cla97C05G081980	Bottle gourd (USVL1VR-Ls)	lsiwmbB331
Cla97C05G081980	Melon (DHL92) v3.6.1	medwmbB436
Cla97C05G081980	Melon (DHL92) v3.5.1	mewmbB437
Cla97C05G081980	Watermelon (Charleston Gray)	wcgwmbB231
Cla97C05G081980	Watermelon (97103) v1	wmwmbB206
Cla97C05G081980	Watermelon (97103) v1	wmwmbB210