CmaCh14G020320 (gene) Cucurbita maxima (Rimu)

NameCmaCh14G020320
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_35
LocationCma_Chr14 : 14178024 .. 14179345 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATATATAAACCGGAAGCGGTTTATAGCAAACAAGAGGAAACGCGATTTCTTCTCCGTCCAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACTGCCGATTATGGCCCTCAACCCAATTTTCTCGATCCTGTGAGTTCTCTAAGCATCTCTCCCTCAAAATTTTTATTATCTGTCTGGTTCGAAGCAGTAGGATCTTGGATCTTATGTAGGTTAGTTTCTTTTTACTATTCAGCAACCCAAGGACGCGGATTTGTTGGTGCTCTTTTGACTGTCTTTTTCTGATGTGATATCTGTTTGTCTATTATGGATTCCGTTATTTAGACATTGATGAACTTCCTCTTATCTGTATTCTTTTCAAGCGAAAAATGAATTGCGTTTGCAGTGATTTCGTTTCTTAATCAATTTTGCTTTTTATGCAACTCGTGTAGTGTAGTTCAAGCTCTTGGATTTCCGATCATATTTTACTCGCTTATTGTTCTTAATTTTTGTTGCCAGTGTATTAGTTGTCGTATATTTCGCCTTGTACTTGATTTAACGTGTAGAACCTAGGGTTTCTACATTCTTCGTCGGTCTTGTTTTCCTTGCTAAATTTACCATTGTTTAACACGATTTATGTTTAGTTTATGAAATTTTCATCCATTGTGTTGTAAATTTGTTGAGGCTTTTAACACTTCACTACACTGAGTTTAAATTAGATGGAAAATTTTCCTTCCATTACGTTGTCAAATTGCTGAGAGAGAACATATACGTTCATCTGATCTCTTACAACAATCTGAAGTTTGTAGGTTTATGAGTTGCTAATTAGCATTTATTCTTGTTTTTGAGTCATCACTTTCAATGAAATTTATACCTTGCTAGATTTGTCTGTCGCTCATAATTTCTTGATATTGAAGTGAGATATGAAAACTAAGAGTGAAGTGTCCCTTTCTATTCAATTAGAAGCAAGAAGACTGGGCATTTAGCAAATTAAGTTTAGGTGACAATTAACATGGTTTTACTTCTACATATAGTTAACAACTGGAAGGCATTAGACATTTCAGTTATTTGCCATAATCATAACTTATTGATTGGTGTTTGATCGAATTTTCAGATGTCTAGAAAATTGTTCATATTGTTCTGAGTTCTAATGGCCTAATTTGGAATGGCAGATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGGTGTCAAGGACAATCCATGA

mRNA sequence

CCATATATAAACCGGAAGCGGTTTATAGCAAACAAGAGGAAACGCGATTTCTTCTCCGTCCAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACTGCCGATTATGGCCCTCAACCCAATTTTCTCGATCCTATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGGTGTCAAGGACAATCCATGA

Coding sequence (CDS)

ATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACTGCCGATTATGGCCCTCAACCCAATTTTCTCGATCCTATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGGTGTCAAGGACAATCCATGA

Protein sequence

MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNGVKDNP
BLAST of CmaCh14G020320 vs. TrEMBL
Match: A0A0A0L7H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122460 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.1e-30
Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 1

Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILS ESSIKGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKVILSAESSIKGFIFGSNN 60

Query: 61 QSQGSQSEKLGSNGVKDN 79
          QSQ  Q EKLGSNGVKDN
Sbjct: 61 QSQEGQREKLGSNGVKDN 78

BLAST of CmaCh14G020320 vs. TrEMBL
Match: A0A059CJG1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02283 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.5e-19
Identity = 48/66 (72.73%), Postives = 59/66 (89.39%), Query Frame = 1

Query: 1   MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60
           M+NPRTDKL+RRTTMVAT+TA+YFLLTADYGP+PN LDPIKK ILS E+ +KGF+FGS+ 
Sbjct: 73  MMNPRTDKLVRRTTMVATITAAYFLLTADYGPEPNALDPIKKAILSAENRVKGFVFGSSE 132

Query: 61  QSQGSQ 67
           + + SQ
Sbjct: 133 KPRESQ 138

BLAST of CmaCh14G020320 vs. TrEMBL
Match: A0A0S3SYV2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G152600 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.6e-19
Identity = 54/79 (68.35%), Postives = 64/79 (81.01%), Query Frame = 1

Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60
          ++NPRT+KL+RR T+VATVTASYFLLTADYGPQPN LDPIKK ILS +S +KG+I GS  
Sbjct: 3  LMNPRTEKLVRRLTIVATVTASYFLLTADYGPQPNALDPIKKQILSAQSMVKGYILGSKI 62

Query: 61 QSQGSQSEKLGSNGVKDNP 80
          +SQ +Q  KL SN  KD P
Sbjct: 63 ESQENQLGKLDSN--KDQP 79

BLAST of CmaCh14G020320 vs. TrEMBL
Match: A0A151UCK2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_021322 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.3e-19
Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 1

Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60
          ++NPRT+KL+RR T+V TV ASYFLLTADYGPQPN LDPIKK ILS ES++K ++FGS  
Sbjct: 3  LMNPRTEKLVRRLTIVTTVAASYFLLTADYGPQPNALDPIKKQILSAESTVKEYVFGSKK 62

Query: 61 QSQGSQSEKLGSNGVKDNP 80
          +SQ +Q+ KL SN  KD P
Sbjct: 63 ESQENQTGKLDSN--KDRP 79

BLAST of CmaCh14G020320 vs. TrEMBL
Match: V4U2N6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023145mg PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.3e-19
Identity = 52/79 (65.82%), Postives = 64/79 (81.01%), Query Frame = 1

Query: 2  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQ 61
          +NP+TDK++RRTTMVAT  ASYFLLTADYGP+PN LDPIKK ILS ESS+K FIFGS  +
Sbjct: 1  MNPQTDKIVRRTTMVATAVASYFLLTADYGPEPNALDPIKKAILSAESSVKEFIFGSKKE 60

Query: 62 -SQGSQSEKLGSNGVKDNP 80
            + SQ+ KL S+  K++P
Sbjct: 61 PREESQTAKLSSDNSKEHP 79

BLAST of CmaCh14G020320 vs. TAIR10
Match: AT4G00530.1 (AT4G00530.1 unknown protein)

HSP 1 Score: 87.8 bits (216), Expect = 3.2e-18
Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 1

Query: 2  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQ 61
          +NP+TDK++RRTTMVAT  ASYFLLT DYGP+PN LDPIK+ IL+ + S+K FIFG   +
Sbjct: 1  MNPQTDKVVRRTTMVATAVASYFLLTGDYGPEPNVLDPIKRKILAAQDSVKQFIFGPKGE 60

Query: 62 SQGSQ 67
            G +
Sbjct: 61 PSGKE 65

BLAST of CmaCh14G020320 vs. TAIR10
Match: AT1G01725.1 (AT1G01725.1 unknown protein)

HSP 1 Score: 72.4 bits (176), Expect = 1.4e-13
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1

Query: 2  VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQ 61
          +NP+ +K+++ T++VAT   SYFLLTADYGP+PN LDPI++ ILS + S+K FIF S   
Sbjct: 1  MNPQIEKVVKVTSVVATAVVSYFLLTADYGPEPNALDPIRQRILSAQDSVKEFIFPSKKS 60

Query: 62 SQ 64
           +
Sbjct: 61 DK 62

BLAST of CmaCh14G020320 vs. NCBI nr
Match: gi|659075274|ref|XP_008438057.1| (PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo])

HSP 1 Score: 138.7 bits (348), Expect = 4.5e-30
Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 1

Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILS ESSIKGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60

Query: 61 QSQGSQSEKLGSNGVKDN 79
          QSQ  Q EKLGSNGVKDN
Sbjct: 61 QSQEGQREKLGSNGVKDN 78

BLAST of CmaCh14G020320 vs. NCBI nr
Match: gi|778677234|ref|XP_011650756.1| (PREDICTED: uncharacterized protein LOC105434815 [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 5.9e-30
Identity = 71/78 (91.03%), Postives = 72/78 (92.31%), Query Frame = 1

Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60
          MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILS ESSIKGFIFGSNN
Sbjct: 1  MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKVILSAESSIKGFIFGSNN 60

Query: 61 QSQGSQSEKLGSNGVKDN 79
          QSQ  Q EKLGSNGVKDN
Sbjct: 61 QSQEGQREKLGSNGVKDN 78

BLAST of CmaCh14G020320 vs. NCBI nr
Match: gi|1009172618|ref|XP_015867370.1| (PREDICTED: uncharacterized protein LOC107404888 [Ziziphus jujuba])

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-23
Identity = 59/79 (74.68%), Postives = 67/79 (84.81%), Query Frame = 1

Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60
          M+ P+TDKL+RRT MVATVTASYFL+TADYGPQPN LDPIKK ILS ESS+K FIFGSNN
Sbjct: 1  MLKPQTDKLVRRTAMVATVTASYFLITADYGPQPNALDPIKKAILSAESSVKEFIFGSNN 60

Query: 61 QSQGSQSEKLGSNGVKDNP 80
          QS+ S+ EKLGS   K +P
Sbjct: 61 QSEESEIEKLGSESAKKHP 79

BLAST of CmaCh14G020320 vs. NCBI nr
Match: gi|802695462|ref|XP_012083410.1| (PREDICTED: uncharacterized protein LOC105642997 [Jatropha curcas])

HSP 1 Score: 105.5 bits (262), Expect = 4.2e-20
Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 1

Query: 1  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60
          ++NP+TDK++RRTTM+ TV ASYFLLTADYGP+PN  DPIKK +LS ESS+K +IFGS  
Sbjct: 3  VMNPKTDKIVRRTTMIGTVVASYFLLTADYGPEPNVFDPIKKALLSAESSVKEYIFGSKK 62

Query: 61 QSQGSQSEKLGSNGVKDN 79
          + +G Q EKL SN  K++
Sbjct: 63 EPEGGQMEKLSSNSAKEH 80

BLAST of CmaCh14G020320 vs. NCBI nr
Match: gi|629113100|gb|KCW78060.1| (hypothetical protein EUGRSUZ_D02283 [Eucalyptus grandis])

HSP 1 Score: 102.4 bits (254), Expect = 3.6e-19
Identity = 48/66 (72.73%), Postives = 59/66 (89.39%), Query Frame = 1

Query: 1   MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 60
           M+NPRTDKL+RRTTMVAT+TA+YFLLTADYGP+PN LDPIKK ILS E+ +KGF+FGS+ 
Sbjct: 73  MMNPRTDKLVRRTTMVATITAAYFLLTADYGPEPNALDPIKKAILSAENRVKGFVFGSSE 132

Query: 61  QSQGSQ 67
           + + SQ
Sbjct: 133 KPRESQ 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L7H0_CUCSA4.1e-3091.03Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122460 PE=4 SV=1[more]
A0A059CJG1_EUCGR2.5e-1972.73Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02283 PE=4 SV=1[more]
A0A0S3SYV2_PHAAN5.6e-1968.35Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G152600 PE=... [more]
A0A151UCK2_CAJCA7.3e-1965.82Uncharacterized protein OS=Cajanus cajan GN=KK1_021322 PE=4 SV=1[more]
V4U2N6_9ROSI7.3e-1965.82Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023145mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G00530.13.2e-1861.54 unknown protein[more]
AT1G01725.11.4e-1353.23 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659075274|ref|XP_008438057.1|4.5e-3091.03PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo][more]
gi|778677234|ref|XP_011650756.1|5.9e-3091.03PREDICTED: uncharacterized protein LOC105434815 [Cucumis sativus][more]
gi|1009172618|ref|XP_015867370.1|1.8e-2374.68PREDICTED: uncharacterized protein LOC107404888 [Ziziphus jujuba][more]
gi|802695462|ref|XP_012083410.1|4.2e-2062.82PREDICTED: uncharacterized protein LOC105642997 [Jatropha curcas][more]
gi|629113100|gb|KCW78060.1|3.6e-1972.73hypothetical protein EUGRSUZ_D02283 [Eucalyptus grandis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G020320.1CmaCh14G020320.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37696FAMILY NOT NAMEDcoord: 1..73
score: 1.8
NoneNo IPR availablePANTHERPTHR37696:SF1SUBFAMILY NOT NAMEDcoord: 1..73
score: 1.8

The following gene(s) are paralogous to this gene:

None