Cp4.1LG03g16860 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g16860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUvrABC system protein A
LocationCp4.1LG03 : 13082121 .. 13087006 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCACCGAACGATCCCAAATATCCCTATATAAACCGGAAGCGGTTTATATAGCGAACAAGCGGAAACGCGATTTCTTCTCCGTCGAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACCGCCGACTATGGCCCTCAACCCAATTTTCTCGATCCTGTGAGTTCTCTAAGCATCTCTCCCTCAAATTTTTTATTATCTCTCTGGTTCGAAGCAGTAGGATCTTGGATCTTATGTAGGTTAGTTTCTTTTTACTATTCAGCAACCCAGGGATTTTTATCGTGTCATTGACGCGGATTTGTTGGTGTTCTTTTGTCTGTATTTTTCTGATGTGATTTCTGTTTGTCTATTATGGATTCCGTTATCTAGACATTGATGAACTTCCTCTTATCTGTATTCTTTTCAAGCGAAAAATGAATTGCGTTTGCAGTGACTTCGTTTCTTAATCAATTTTTCTTTTTATGCAACTCGTATAGTGTAGTTCAAGCTCTTGGATTTCCAATCATATTTACTCGCTTATTGTTCTTAATTTTTGTTGCCAGTGTATCAGTTGTCGTATATTTCGCCTTGTACTTGATTTAACGTGTAGAACCTAGGTTTTCTACATTCTTCGTCGGTCTTGTTTTCCTTGCTAAATTTACCATTGTTTAACACGATTTATGTTTAGTTTATGAAATTTTCATCCATTGTGTTATAAATTTGTTGAGGCTTTAACATTTCAATGCACTGAGTTTAAATTAGATGGAAAATTTCCTTCCAATACGTTGTCAAATTGCTGAGAGTGAACATATACGTTCATCTGATCTCTTACAACAATCTGAAGTTTGTAGGTTTATGAGTTGCTAATTACCATTTGTTCTTGTTTTTGAGTCATCAATTTCAATGAAATTTATACCTTGCTAGATTTGTCTGTCGCTCATAATTTCTTGATAGTGAAGTGAGATATGAAAACTAAGAGTAAAGAGTGAAGTTTCCCTTTCTATTCAGTTAGAAGCAAGAAGACTTGGCATTTAGCATATTAATAACATAAGTTTAGGTGACAATTAACATGGTTTTACTTCTACATATTAACAACTGGAAGGCATTAGACATTTCAGTTCTTTGCCATAACAATAACTTATTGATCTACCAGTGTTCGATCGAATTTTCAGATGTCTAGAAGATTGTTCATATTGTTCTGAGTTCTAATGGCCTAATTTGGAATGGCAGATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGGTGTCAAGGACAATCCATGATGCGTAGACTCGAGGATTTGGTTACGGTTTTATGCATACATATCTTGAATCTGCAGTTTTTGTTTATACATTTCGTGAAGCGTAGGTCGAGATCAAGCATGAGTAGACCTCTTGGAGGAGACGAATAATGCAGTTTGTTAGATTCTAAGGTGTTGAATGAGTTTGTTATTACCAACTTCATTTAGCATCTTAACCTCAAGAGATTCAAAATACTTTGCATATTTTGGAATTGCTATGATATCATATCAAGTGGTTCTGAACTCCTGTAGAAAAAATGAACATTGCTCTGATTTAGGAACTTTAGAAGTGAAATGTGGTTCTGTGCTGGAATGGTGAGTCAGCCCGAGCCCACGGGAACGTGCTTTAAAACCGTGAGGCTGACGTCTATACGTCACGGGCCAAAGTGGACAATGTTTGTTAGCGTTGGGTTTGGGCTATTACAATTTTCTTATCCTATACAGAATGAAAGGAATCCAATGATGCTTTCCCAAGAACAATGAAGTTGCTATTTTTGCTTTGAACGAAAGGAGAATAGAGGTATTAAGAAAATGGATTTTTCGACGATCTAAAACTTCAATCCCTTTTGAGGGCCAAATACCTTTGATCGTGTCGGTGTCAAAGAAAAATGAAAAAAAAAAAAAAAATTCAATTCAAAATTAGTTAATAAATAATGTTAGGTGGGCCTATGATTGGGCCGATGGGCCTATTGGTTTACATTCAAGTTTCATCAATCGGGCTTCGAGACCCGACTGGTTGAAGCGCGGGCTGTGCACTTCTCTTCTAATCGATTTCACAATCCCATTCCATTTCCATGTCGAACTCTCAAACTTCAAAATCCATTGCGCTCCAAAATCCCAAGATTAGCATTCCATTCGATTCCAACACACAACTGAATTTCGTCTCTCCCTCTGATCTTCCACTCCTACTTCTCTAGAAACTGTCGTGGTTTCAAAACCGAACATGTCCCCAGACAATCCCGGTGAAGACGCCGGTGTTTCTGGATTTGAATCCCAAGAAACGGAGCCTCACTATGAGGTTGAAGAGCTGGAGCTTGAAGTGAATCAAATAGCTCAGAGGATTCATCACTACAGATCCTCTCTGTCGGCTCAGCTAAAGTCCTCCTTTTCGTTACTCGAGTCCTCGAGGCCTCTCCCCATTGGAGCCTCGCACCTGGAAACATCTGCTTCTCGTCCGGATCATGAAGGTCGGATTCTGTGCCTCTAATTTTATTTAGTTGCTTCACGTTTTTCTTTCTTTCTTGCTTGGAACTGGTAGATTTACTGACTGAGAAAATGAAGTGAAAGTTTCTTTGTTTTGAATACACATTTAGAAGTGTTAAATTGGGGCGAGTGGAATGCATGTTGTTCTGAATTATTTGATAGAAGGTTTCTTTTGGCTATTGAACAAGGCAACATTATGTAACCAGCGAAGGCTTCTGCCTAACCAAACTGTCTTTCTGTTTCATTTCCTTCTCTGTTCTTCCTGTAAATTGCATTGGGTGAAGGCTTCTGTTCTTTTGTTGGTTGTAGTTTATAAAGTATGATATTTGTTGATTGTTCGTTTAAGTTCTTAAGAATATTTGATGATATTTTTATATGTTTAATTTATGATCTATGTTCAAGTGAGTTTAGTTCTCAAAAGTGAGCATAGCTCAACAGTTCTCGACATGCATTTCTTCTCAAAATTTTAGAATCAAATTCTCATCCCCACTTGTTATACTAAAACAATGAGTGAGTTTAGTTAGACGGTAACTCCTCACTACTTTTGAAGCTTTTAGGCCATTTGGGAAAGCACACCATTAAATCGAGCTAGTTTTTCACTATGTAGGCTGTTCTTGCTGTTTGGGGGTGAGTCTATCATCCTCAGGGGGTAATTCTTTCAGTAACAATCATTCTAATGCAGCTGTTGCATCACAAGTTAAAAAAGAAATACATAATTCTTGCTTTAAGCCAAGGGTGTTAGGCAGTCCTATGGGAGCTCTGAGTTGAAAGAAATTCTAGGATTTTACTAGATGATCTTTTTGGTATACACTTTTTGTATTTTTGTTGATTCGGGTCATTTTTTGCAATAATAGATGATGCATATTTCGATCGATTATGCCAACCTATTATCGAGCAAGTATTAACTTTTTGGACTTGTAAGTGAGCTTATTGTATGGCAATGAAGCATTATTTCCTACAAACTTGTATTCTGATTGAGAAATCACTCTGTTTATGCAGATGATGAACAAACCACCACAAGAGGTGAAGGCACAGTTCATGAAGAGGGATTAGAAACTGCGAAGAAGATACAGTTGCTTGAAGATAAAATATCAAGTAATATCATCCTGATCCCTACAGTTCTTAAGAGGATGAAAGACTGTATTTCAACTATTGACAATTTGGCTTCTTATAATGGGGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGAATTTAACTCGTACCTGGCTGTTACTTTACAAGCAATTCTCGAGGGTAGTACGGTTATCGAGTTAGACGTGTAGTGTATTGATCTTTACATTCTGTTGTCGAAAGGGCTGATTTCTCAACCATTTGCTTCCTGGTATGTAACATAACCTCCTGTCTATAACGTTATTGAAGACAATAGTTTTCCATCTGTTGCTGTATAAAGTTCTTGAAATATTGAAATAGGAAGTTTTATGCCTATTCCTTCAGCTTCTCTAAAGTTTTACTCCTATTTGTTTCACACGACACAGCTTGCAATTATCGATATCATTCACGAACCTAAAAAATGTAACTTTCCTGCGATTATAATGATAGGAACAAGAACTTGTATATATTGATAAGAGAACATTAACAAAGAGTATCAATTCTCCAATATTTCATTGAAAGAGTATATACATTATGGTATTGCATAAGGGCAAGTTTGTCTATCAGGTGGAGGCAGCTTAAATTGTTACACATTTACAGGAAAGTACATCAACATCAGAATCTAATCTTGGTATAGAGGAACTCACCATCAACCCTTCCATAGTCCTTGCGTTGTCCACATTAAAGATGACGCTGCTGAGTCCCTTCCCCACGACGACGATTCTTTTCCCGACAGCGACGAGTTGACATGGCGGTCTCGTTAGAAGGGCAGAAAATCTCCCCACTGGAATCCATTCCTTGACTTCATTGTTCCACATCATCAATCTGGTTCCAGAACTTTGATCCAAAACATAAAGAGTTTTGTCTACAATAACCGCTGGACCTCGCCATCCCGAAACCATTTCTGAGTCACTGTGCTCCCACGTTCCACTCGATGGGTCGTAAACCAGAGCATAAGCTTGAGAGTCCACAGAACGTTGACGGATATAAATCTTTCCATCCATCACAATCGAACCTTCAATTTCGTTCGGAATATTTGTAATGTCCAAGCAAGGTTCCCATTTGTTGGTGCATGGGTCATATATGTCCCAAGAATGTCGATCACCTGAATTGGAACATAAGCCCCCAATGGCATAAAGCTTTTCATTTAAGACTTCACAAGCAAAGTAGCA

mRNA sequence

ACCACCGAACGATCCCAAATATCCCTATATAAACCGGAAGCGGTTTATATAGCGAACAAGCGGAAACGCGATTTCTTCTCCGTCGAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACCGCCGACTATGGCCCTCAACCCAATTTTCTCGATCCTATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGATGATGAACAAACCACCACAAGAGGTGAAGGCACAGTTCATGAAGAGGGATTAGAAACTGCGAAGAAGATACAGTTGCTTGAAGATAAAATATCAAGTAATATCATCCTGATCCCTACAGTTCTTAAGAGGATGAAAGACTGTATTTCAACTATTGACAATTTGGCTTCTTATAATGGGGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGAATTTAACTCGTACCTGGCTGTTACTTTACAAGCAATTCTCGAGGGTAGTACGGTTATCGAGTTAGACGTGTAGTGTATTGATCTTTACATTCTGTTGTCGAAAGGGCTGATTTCTCAACCATTTGCTTCCTGGTATGTAACATAACCTCCTGTCTATAACGTTATTGAAGACAATAGTTTTCCATCTGTTGCTGTATAAAGTTCTTGAAATATTGAAATAGGAAGTTTTATGCCTATTCCTTCAGCTTCTCTAAAGTTTTACTCCTATTTGTTTCACACGACACAGCTTGCAATTATCGATATCATTCACGAACCTAAAAAATGTAACTTTCCTGCGATTATAATGATAGGAACAAGAACTTGTATATATTGATAAGAGAACATTAACAAAGAGTATCAATTCTCCAATATTTCATTGAAAGAGTATATACATTATGGTATTGCATAAGGGCAAGTTTGTCTATCAGGTGGAGGCAGCTTAAATTGTTACACATTTACAGGAAAGTACATCAACATCAGAATCTAATCTTGGTATAGAGGAACTCACCATCAACCCTTCCATAGTCCTTGCGTTGTCCACATTAAAGATGACGCTGCTGAGTCCCTTCCCCACGACGACGATTCTTTTCCCGACAGCGACGAGTTGACATGGCGGTCTCGTTAGAAGGGCAGAAAATCTCCCCACTGGAATCCATTCCTTGACTTCATTGTTCCACATCATCAATCTGGTTCCAGAACTTTGATCCAAAACATAAAGAGTTTTGTCTACAATAACCGCTGGACCTCGCCATCCCGAAACCATTTCTGAGTCACTGTGCTCCCACGTTCCACTCGATGGGTCGTAAACCAGAGCATAAGCTTGAGAGTCCACAGAACGTTGACGGATATAAATCTTTCCATCCATCACAATCGAACCTTCAATTTCGTTCGGAATATTTGTAATGTCCAAGCAAGGTTCCCATTTGTTGGTGCATGGGTCATATATGTCCCAAGAATGTCGATCACCTGAATTGGAACATAAGCCCCCAATGGCATAAAGCTTTTCATTTAAGACTTCACAAGCAAAGTAGCA

Coding sequence (CDS)

ACCACCGAACGATCCCAAATATCCCTATATAAACCGGAAGCGGTTTATATAGCGAACAAGCGGAAACGCGATTTCTTCTCCGTCGAAATGGTGAATCCGCGAACAGACAAGTTGCTGAGAAGAACAACTATGGTGGCCACTGTCACTGCTTCATACTTTCTCTTAACCGCCGACTATGGCCCTCAACCCAATTTTCTCGATCCTATCAAAAAGTTTATACTGTCAACAGAAAGTTCTATTAAGGGTTTCATCTTTGGATCAAATAATCAATCTCAAGGAAGTCAAAGTGAGAAGCTTGGCTCCAATGATGATGAACAAACCACCACAAGAGGTGAAGGCACAGTTCATGAAGAGGGATTAGAAACTGCGAAGAAGATACAGTTGCTTGAAGATAAAATATCAAGTAATATCATCCTGATCCCTACAGTTCTTAAGAGGATGAAAGACTGTATTTCAACTATTGACAATTTGGCTTCTTATAATGGGGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGA

Protein sequence

TTERSQISLYKPEAVYIANKRKRDFFSVEMVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQSQGSQSEKLGSNDDEQTTTRGEGTVHEEGLETAKKIQLLEDKISSNIILIPTVLKRMKDCISTIDNLASYNGVIHPAFKRKKTS
Homology
[Close]
BLAST of Cp4.1LG03g16860 vs. TrEMBL
Match: A0A0A0L7H0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122460 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.5e-27
Identity = 66/73 (90.41%), Postives = 67/73 (91.78%), Query Frame = 1 

Query: 30  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 89
           MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILS ESSIKGFIFGSNN
Sbjct: 1   MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKVILSAESSIKGFIFGSNN 60

Query: 90  QSQGSQSEKLGSN 103
           QSQ  Q EKLGSN
Sbjct: 61  QSQEGQREKLGSN 73

[Close]
BLAST of Cp4.1LG03g16860 vs. TrEMBL
Match: A0A0A0L8X5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122450 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.2e-23
Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 1 

Query: 102 NDDEQTTTRGEGT-VHEEGLETAKKIQLLEDKISSNIILIPTVLKRMKDCISTIDNLASY 161
           ++D++ TTRGE T +HEEGLETAKKIQL++DKISSN  +IPTVLKRMKDCISTID L SY
Sbjct: 79  HEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPTVLKRMKDCISTIDKLDSY 138

Query: 162 NGVIHPAFKRKKTS 175
           NGVIHPAFKRKKTS
Sbjct: 139 NGVIHPAFKRKKTS 152

[Close]
BLAST of Cp4.1LG03g16860 vs. TrEMBL
Match: A0A059CJG1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02283 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19
Identity = 50/77 (64.94%), Postives = 65/77 (84.42%), Query Frame = 1 

Query: 19  NKRKRDFFSVEMVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTES 78
           ++ +R   S +M+NPRTDKL+RRTTMVAT+TA+YFLLTADYGP+PN LDPIKK ILS E+
Sbjct: 62  HESRRFLSSTKMMNPRTDKLVRRTTMVATITAAYFLLTADYGPEPNALDPIKKAILSAEN 121

Query: 79  SIKGFIFGSNNQSQGSQ 96
            +KGF+FGS+ + + SQ
Sbjct: 122 RVKGFVFGSSEKPRESQ 138

[Close]
BLAST of Cp4.1LG03g16860 vs. TrEMBL
Match: A0A0S3SYV2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G152600 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.5e-19
Identity = 52/78 (66.67%), Postives = 64/78 (82.05%), Query Frame = 1 

Query: 28  VEMVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGS 87
           + ++NPRT+KL+RR T+VATVTASYFLLTADYGPQPN LDPIKK ILS +S +KG+I GS
Sbjct: 1   MSLMNPRTEKLVRRLTIVATVTASYFLLTADYGPQPNALDPIKKQILSAQSMVKGYILGS 60

Query: 88  NNQSQGSQSEKLGSNDDE 106
             +SQ +Q  KL SN D+
Sbjct: 61  KIESQENQLGKLDSNKDQ 78

[Close]
BLAST of Cp4.1LG03g16860 vs. TrEMBL
Match: A0A151UCK2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_021322 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.4e-19
Identity = 50/77 (64.94%), Postives = 63/77 (81.82%), Query Frame = 1 

Query: 28  VEMVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGS 87
           + ++NPRT+KL+RR T+V TV ASYFLLTADYGPQPN LDPIKK ILS ES++K ++FGS
Sbjct: 1   MSLMNPRTEKLVRRLTIVTTVAASYFLLTADYGPQPNALDPIKKQILSAESTVKEYVFGS 60

Query: 88  NNQSQGSQSEKLGSNDD 105
             +SQ +Q+ KL SN D
Sbjct: 61  KKESQENQTGKLDSNKD 77

[Close]
BLAST of Cp4.1LG03g16860 vs. TAIR10
Match: AT4G00530.1 (AT4G00530.1 unknown protein)

HSP 1 Score: 87.8 bits (216), Expect = 7.1e-18
Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 1 

Query: 31 VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQ 90
          +NP+TDK++RRTTMVAT  ASYFLLT DYGP+PN LDPIK+ IL+ + S+K FIFG   +
Sbjct: 1  MNPQTDKVVRRTTMVATAVASYFLLTGDYGPEPNVLDPIKRKILAAQDSVKQFIFGPKGE 60

Query: 91 SQGSQ 96
            G +
Sbjct: 61 PSGKE 65

[Close]
BLAST of Cp4.1LG03g16860 vs. TAIR10
Match: AT1G01725.1 (AT1G01725.1 unknown protein)

HSP 1 Score: 72.4 bits (176), Expect = 3.1e-13
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1 

Query: 31 VNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNNQ 90
          +NP+ +K+++ T++VAT   SYFLLTADYGP+PN LDPI++ ILS + S+K FIF S   
Sbjct: 1  MNPQIEKVVKVTSVVATAVVSYFLLTADYGPEPNALDPIRQRILSAQDSVKEFIFPSKKS 60

Query: 91 SQ 93
           +
Sbjct: 61 DK 62

[Close]
BLAST of Cp4.1LG03g16860 vs. TAIR10
Match: AT4G00525.1 (AT4G00525.1 unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06
Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 1 

Query: 115 VHEEGLETAKKIQLLEDKISSNIILIPTVLKRMKDCISTIDNLASYNGVIHPAFKRKK 173
           V EE     K IQL E ++S N   IP V+KRM++CI +ID L S    IHPAFKR++
Sbjct: 82  VLEEQDSEEKWIQLKE-RMSRNAANIPKVVKRMRECIESIDKLDSLEVTIHPAFKRQR 138

[Close]
BLAST of Cp4.1LG03g16860 vs. NCBI nr
Match: gi|659075274|ref|XP_008438057.1| (PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo])

HSP 1 Score: 129.4 bits (324), Expect = 6.0e-27
Identity = 66/73 (90.41%), Postives = 67/73 (91.78%), Query Frame = 1 

Query: 30  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 89
           MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILS ESSIKGFIFGSNN
Sbjct: 1   MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKIILSAESSIKGFIFGSNN 60

Query: 90  QSQGSQSEKLGSN 103
           QSQ  Q EKLGSN
Sbjct: 61  QSQEGQREKLGSN 73

[Close]
BLAST of Cp4.1LG03g16860 vs. NCBI nr
Match: gi|778677234|ref|XP_011650756.1| (PREDICTED: uncharacterized protein LOC105434815 [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 7.9e-27
Identity = 66/73 (90.41%), Postives = 67/73 (91.78%), Query Frame = 1 

Query: 30  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 89
           MVN RTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDP+KK ILS ESSIKGFIFGSNN
Sbjct: 1   MVNQRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPVKKVILSAESSIKGFIFGSNN 60

Query: 90  QSQGSQSEKLGSN 103
           QSQ  Q EKLGSN
Sbjct: 61  QSQEGQREKLGSN 73

[Close]
BLAST of Cp4.1LG03g16860 vs. NCBI nr
Match: gi|449432158|ref|XP_004133867.1| (PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus])

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22
Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 1 

Query: 102 NDDEQTTTRGEGT-VHEEGLETAKKIQLLEDKISSNIILIPTVLKRMKDCISTIDNLASY 161
           ++D++ TTRGE T +HEEGLETAKKIQL++DKISSN  +IPTVLKRMKDCISTID L SY
Sbjct: 79  HEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPTVLKRMKDCISTIDKLDSY 138

Query: 162 NGVIHPAFKRKKTS 175
           NGVIHPAFKRKKTS
Sbjct: 139 NGVIHPAFKRKKTS 152

[Close]
BLAST of Cp4.1LG03g16860 vs. NCBI nr
Match: gi|659075272|ref|XP_008438056.1| (PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo])

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22
Identity = 58/72 (80.56%), Postives = 66/72 (91.67%), Query Frame = 1 

Query: 102 NDDEQTTTRGEGTV-HEEGLETAKKIQLLEDKISSNIILIPTVLKRMKDCISTIDNLASY 161
           ++D++ TTRGE T+ HEEGLETAKKIQL++DKISSNI +IPTVLKRMKDCISTID L SY
Sbjct: 79  HEDDEQTTRGEDTILHEEGLETAKKIQLMKDKISSNITMIPTVLKRMKDCISTIDKLDSY 138

Query: 162 NGVIHPAFKRKK 173
           NGVIHPAFKRKK
Sbjct: 139 NGVIHPAFKRKK 150

[Close]
BLAST of Cp4.1LG03g16860 vs. NCBI nr
Match: gi|1009172618|ref|XP_015867370.1| (PREDICTED: uncharacterized protein LOC107404888 [Ziziphus jujuba])

HSP 1 Score: 113.6 bits (283), Expect = 3.4e-22
Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 1 

Query: 30  MVNPRTDKLLRRTTMVATVTASYFLLTADYGPQPNFLDPIKKFILSTESSIKGFIFGSNN 89
           M+ P+TDKL+RRT MVATVTASYFL+TADYGPQPN LDPIKK ILS ESS+K FIFGSNN
Sbjct: 1   MLKPQTDKLVRRTAMVATVTASYFLITADYGPQPNALDPIKKAILSAESSVKEFIFGSNN 60

Query: 90  QSQGSQSEKLGS 102
           QS+ S+ EKLGS
Sbjct: 61  QSEESEIEKLGS 72

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g16860 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG03g16860 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7H0_CUCSA5.5e-2790.41Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122460 PE=4 SV=1[more]
A0A0A0L8X5_CUCSA8.2e-2379.73Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122450 PE=4 SV=1[more]
A0A059CJG1_EUCGR1.1e-1964.94Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02283 PE=4 SV=1[more]
A0A0S3SYV2_PHAAN5.5e-1966.67Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G152600 PE=... [more]
A0A151UCK2_CAJCA9.4e-1964.94Uncharacterized protein OS=Cajanus cajan GN=KK1_021322 PE=4 SV=1[more]
BLAST of Cp4.1LG03g16860 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00530.17.1e-1861.54 unknown protein[more]
AT1G01725.13.1e-1353.23 unknown protein[more]
AT4G00525.12.1e-0650.00 unknown protein[more]
BLAST of Cp4.1LG03g16860 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075274|ref|XP_008438057.1|6.0e-2790.41PREDICTED: uncharacterized protein LOC103483279 [Cucumis melo][more]
gi|778677234|ref|XP_011650756.1|7.9e-2790.41PREDICTED: uncharacterized protein LOC105434815 [Cucumis sativus][more]
gi|449432158|ref|XP_004133867.1|1.2e-2279.73PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus][more]
gi|659075272|ref|XP_008438056.1|1.2e-2280.56PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo][more]
gi|1009172618|ref|XP_015867370.1|3.4e-2279.17PREDICTED: uncharacterized protein LOC107404888 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g16860.1Cp4.1LG03g16860.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37696FAMILY NOT NAMEDcoord: 29..102
score: 8.5
NoneNo IPR availablePANTHERPTHR37696:SF1SUBFAMILY NOT NAMEDcoord: 29..102
score: 8.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g16860Cucsa.258310Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g16860CmaCh14G020320Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g16860CmaCh06G010190Cucurbita maxima (Rimu)cmacpeB831
Cp4.1LG03g16860CmoCh14G020930Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g16860CmoCh06G010840Cucurbita moschata (Rifu)cmocpeB784
Cp4.1LG03g16860Csa3G122450Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g16860MELO3C006115Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g16860ClCG05G001580Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g16860CSPI03G08830Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g16860Lsi05G020330Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g16860MELO3C006116.2Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g16860CsaV3_3G008970Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g16860Bhi01G000260Wax gourdcpewgoB0788
Cp4.1LG03g16860CsGy3G008910Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g16860Carg21006Silver-seed gourdcarcpeB0691
Cp4.1LG03g16860Carg24641Silver-seed gourdcarcpeB0536
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g16860Cp4.1LG08g01160Cucurbita pepo (Zucchini)cpecpeB488
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g16860Wax gourdcpewgoB0774
Cp4.1LG03g16860Cucurbita pepo (Zucchini)cpecpeB052
Cp4.1LG03g16860Cucurbita pepo (Zucchini)cpecpeB242
Cp4.1LG03g16860Cucurbita pepo (Zucchini)cpecpeB479
Cp4.1LG03g16860Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG03g16860Cucurbita maxima (Rimu)cmacpeB639
Cp4.1LG03g16860Cucurbita maxima (Rimu)cmacpeB833
Cp4.1LG03g16860Cucurbita moschata (Rifu)cmocpeB589
Cp4.1LG03g16860Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g16860Watermelon (Charleston Gray)cpewcgB556
Cp4.1LG03g16860Watermelon (97103) v1cpewmB612
Cp4.1LG03g16860Watermelon (97103) v1cpewmB613
Cp4.1LG03g16860Silver-seed gourdcarcpeB0922