Carg24641 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24641
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Eukaryotic translation initiation factor 3 subunit C like
Location	Cucurbita_argyrosperma_scaffold_269 : 35359 .. 37254 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTTCGACAAACCCGGTGAAGACACCGGGGTTTCTGGATTTGAATCCGAAGAAATGGAGCCCGATTCTGAGCTTGAGGAGCTCGAGCTTGAAGTAAACCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTCTCTGCTCAACTAAAGTCCTCCTTCATTTCGTTACTCGAGTCCGCGAGGCCTGTTGCCTTCGGACCCTCGGAGCCGGGAATATCTGTTCCTCCGAATCATGAAGGTGGGTTGTGTTTTCTTTCTTTCTCCGAACTTGTAGATTTTCTCTGTGAAAATGAATTGAAAGAAATCTGAAATTATGTTGTTCTATTAGGTATATGCTTCTTTGAAGTGAATGAGTTTGCTGTTTGGGAATTCTGTGCCAACGGGTTGGTTTTTAAATGCTCTTTGAAGTGTTTAATTAGGGCGAATGGAATACAATTAGTTCTAATTTTTTTGATCTGGAATTGCTACCTGTTCTTCTCACTGATTTGATTTGCAATTCTGGTTCAGGATGGGGGGATTAAGTTCAAATACTCCTATTTTGTTGGCTTTTGAGCTAAATTTATGTATCCAACGGTAGTTTTTGGGAATGCCTTTCTGGAGCATTCAGCTTAAGATTTAGAAGGACTATTTTAGGACTAGTGACCTGTAGTGAACTGGTTCGTGTGCATATTTTTTAAGTACTTAGAAAGTCATTTCAATCGGGTCTTTCATTTATCGATTTCATCTCATATGAGAAGCTCATTGATATAATTATATTTAATCTTTTTATTCAGTTTTTCTTGTTCTTTTCCTGTAGTGTTCCAAACTGTATTTCTGTTTCATGTCCTTCTGTTGGTTGCAGTTTATATAATCGTTGACAATTGCAAAAAAATTGTTGATTGTGATGATACTTCAATATGTTACGTTTACAATCTATGTTTCAAGTGAGTTTAGTAAGGCTGTAACTCATCACTACTTGTGGATCTTATTGGCCAATTCTGAAAATTACACAATTAAGTTCAGCTAGTGTTTCACTAGGTAGGTTGTTCTTGCTGTTTCGGGGTGAGTGTATCGACTTCAGTAGTTATTCCTTTCGGTAGCAAATATTCTAATGCAGCTATTGTATCACAAGTTGAAAAAGAAAGTCAAAGTTCTTACTCTACTCTAAGCTAACGAATTTCGGCTGTCCTATGATAGCTCCGAGTCAGCGAATTCTAGGACTTTTCGAGACAAGGATTTAGCCAGATGGTTAGCTTTTTCGTGTACCCTTAATCTTATTATTTTTGTGACTCTAGTGCCTCTTGTATTTATGTTGATCGAGGTCCTTTTTTCGCGAAATAGCTTTTAGCTTTTAGGGTGGATTGCTCATTCCCCTGCTTTTGTGTTCCTTTTGATTCTCTAATTCAATGTTCTGCAGAAGTCTGTATGCCATCTCTACTTTAGTTATATTATATTTACGGTTCATGAGCGCTTCGATAATTCGTGCATGTTCTGATTGATTACGCCAACCTACGATCTTTTTCAAAAAGCAAATATTAACCTTTTGGACTCGATCATGAGTTTACTCCAAGGATGTACTTGTGTGACAATGTTGGTGTGTCTGGTGGCAATGAAGAGTTATTCTGATGATGCATATAGGATTTATTTACTCAGCTGTATGTCCTGACTGACAAATCATTTTGTTACGCAGATGATGAACAACAAATCACAAGAGGTGAAGGAACAGTCCTTCATGACGAGGGTTTAGAAGCAGAAAAGAAGATACAATTGCTCAAAGATAAAATATCAAGTAATATCTCTATGATTCCTGCAGTTCTGAAGAGGATGAAAGACTGTATTTCAACAATTGACAATTTGGATTCGTATAATGGGTCCATTCATCCTGCATTCAAAAGGAGAAAAGCTAGCTGA

mRNA sequence

ATGTCCTTCGACAAACCCGGTGAAGACACCGGGGTTTCTGGATTTGAATCCGAAGAAATGGAGCCCGATTCTGAGCTTGAGGAGCTCGAGCTTGAAGTAAACCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTCTCTGCTCAACTAAAGTCCTCCTTCATTTCGTTACTCGAGTCCGCGAGGCCTGTTGCCTTCGGACCCTCGGAGCCGGGAATATCTGTTCCTCCGAATCATGAAGATGATGAACAACAAATCACAAGAGGTGAAGGAACAGTCCTTCATGACGAGGGTTTAGAAGCAGAAAAGAAGATACAATTGCTCAAAGATAAAATATCAAGTAATATCTCTATGATTCCTGCAGTTCTGAAGAGGATGAAAGACTGTATTTCAACAATTGACAATTTGGATTCGTATAATGGGTCCATTCATCCTGCATTCAAAAGGAGAAAAGCTAGCTGA

Coding sequence (CDS)

ATGTCCTTCGACAAACCCGGTGAAGACACCGGGGTTTCTGGATTTGAATCCGAAGAAATGGAGCCCGATTCTGAGCTTGAGGAGCTCGAGCTTGAAGTAAACCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTCTCTGCTCAACTAAAGTCCTCCTTCATTTCGTTACTCGAGTCCGCGAGGCCTGTTGCCTTCGGACCCTCGGAGCCGGGAATATCTGTTCCTCCGAATCATGAAGATGATGAACAACAAATCACAAGAGGTGAAGGAACAGTCCTTCATGACGAGGGTTTAGAAGCAGAAAAGAAGATACAATTGCTCAAAGATAAAATATCAAGTAATATCTCTATGATTCCTGCAGTTCTGAAGAGGATGAAAGACTGTATTTCAACAATTGACAATTTGGATTCGTATAATGGGTCCATTCATCCTGCATTCAAAAGGAGAAAAGCTAGCTGA

Protein sequence

MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS

Homology

[Close]

BLAST of Carg24641 vs. NCBI nr
Match: XP_022938825.1 (uncharacterized protein LOC111444897 isoform X1 [Cucurbita moschata])

HSP 1 Score: 297.4 bits (760), Expect = 2.9e-77
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE 60
           MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE
Sbjct: 1   MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE 60

Query: 61  SARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMI 120
           SARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMI
Sbjct: 61  SARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMI 120

Query: 121 PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS 155
           PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
Sbjct: 121 PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS 154

[Close]

BLAST of Carg24641 vs. NCBI nr
Match: XP_023540790.1 (uncharacterized protein LOC111801058 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.1 bits (749), Expect = 5.4e-76
Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE 60
           MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE
Sbjct: 1   MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE 60

Query: 61  SARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMI 120
           SARPVAFGPSEPGISVPPNHEDDEQQIT GEGTVLHDEGLE EKKIQLLKDKISSNISMI
Sbjct: 61  SARPVAFGPSEPGISVPPNHEDDEQQITGGEGTVLHDEGLETEKKIQLLKDKISSNISMI 120

Query: 121 PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS 155
           PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
Sbjct: 121 PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS 154

[Close]

BLAST of Carg24641 vs. NCBI nr
Match: XP_022974668.1 (uncharacterized protein LOC111473350 isoform X1 [Cucurbita maxima])

HSP 1 Score: 290.0 bits (741), Expect = 4.6e-75
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE 60
           MSFDKPGEDTGVSGFESEEMEPDSE EELELEVNQMAQRILHYRSTLSAQLKSSFISLLE
Sbjct: 1   MSFDKPGEDTGVSGFESEEMEPDSEHEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE 60

Query: 61  SARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMI 120
           SARPVAFG SEPGISVPPNHEDDEQQITRGEGTVLHDEGLE EKKIQLLKDKISSNISMI
Sbjct: 61  SARPVAFGASEPGISVPPNHEDDEQQITRGEGTVLHDEGLETEKKIQLLKDKISSNISMI 120

Query: 121 PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS 155
           PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS
Sbjct: 121 PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS 154

[Close]

BLAST of Carg24641 vs. NCBI nr
Match: XP_008438056.1 (PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo])

HSP 1 Score: 229.2 bits (583), Expect = 9.7e-57
Identity = 122/152 (80.26%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE 60
           MS DKPGED GVSGFESEE EPDSELEELELEV QMAQRILHYRST+ A++KSSF SLLE
Sbjct: 1   MSSDKPGEDAGVSGFESEETEPDSELEELELEVQQMAQRILHYRSTMWAEIKSSFCSLLE 60

Query: 61  SARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMI 120
           S+RP+A   SEPGIS  P HEDDE Q TRGE T+LH+EGLE  KKIQL+KDKISSNI+MI
Sbjct: 61  SSRPLAIA-SEPGISARPYHEDDE-QTTRGEDTILHEEGLETAKKIQLMKDKISSNITMI 120

Query: 121 PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRK 153
           P VLKRMKDCISTID LDSYNG IHPAFKR+K
Sbjct: 121 PTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 150

[Close]

BLAST of Carg24641 vs. NCBI nr
Match: XP_004133867.1 (PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus] >KGN56521.1 hypothetical protein Csa_3G122450 [Cucumis sativus])

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 124/154 (80.52%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 1   MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE 60
           MS DKPGED GVSGFE EE EPDSELEELELEV QMAQRILHYRSTLSAQ+KSSF SLLE
Sbjct: 1   MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE 60

Query: 61  SARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMI 120
           S+RP+A   SEPGIS  P+HEDDE Q TRGE T LH+EGLE  KKIQL+KDKISSN +MI
Sbjct: 61  SSRPLAIA-SEPGISARPDHEDDE-QTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMI 120

Query: 121 PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS 155
           P VLKRMKDCISTID LDSYNG IHPAFKR+K S
Sbjct: 121 PTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS 152

[Close]

BLAST of Carg24641 vs. TAIR10
Match: AT4G00525.1 (unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 23  DSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNHED 82
           + +LE+LE +V QMA++I  YR TL   L+++  S L S  PV F   + G    P+   
Sbjct: 14  EGDLEKLESDVKQMAKKISEYRQTLPDHLRNTLDSALSSHIPV-FPNIDSGSDPLPS--- 73

Query: 83  DEQQITRGEGTV--LHDEGLEAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSY 142
               +T  E  V  + +E    EK IQ LK+++S N + IP V+              S 
Sbjct: 74  --SCLTIAEAQVPGVLEEQDSEEKWIQ-LKERMSRNAANIPKVVXXXXXXXXXXXXXXSL 133

Query: 143 NGSIHPAFKRRK 153
             +IHPAFKR++
Sbjct: 134 EVTIHPAFKRQR 138

[Close]

BLAST of Carg24641 vs. TrEMBL
Match: tr|A0A1S3AVF8|A0A1S3AVF8_CUCME (uncharacterized protein LOC103483278 OS=Cucumis melo OX=3656 GN=LOC103483278 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 6.4e-57
Identity = 122/152 (80.26%), Postives = 132/152 (86.84%), Query Frame = 0


Query: 1   MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE 60
           MS DKPGED GVSGFESEE EPDSELEELELEV QMAQRILHYRST+ A++KSSF SLLE
Sbjct: 1   MSSDKPGEDAGVSGFESEETEPDSELEELELEVQQMAQRILHYRSTMWAEIKSSFCSLLE 60

Query: 61  SARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMI 120
           S+RP+A   SEPGIS  P HEDDE Q TRGE T+LH+EGLE  KKIQL+KDKISSNI+MI
Sbjct: 61  SSRPLAIA-SEPGISARPYHEDDE-QTTRGEDTILHEEGLETAKKIQLMKDKISSNITMI 120

Query: 121 PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRK 153
           P VLKRMKDCISTID LDSYNG IHPAFKR+K
Sbjct: 121 PTVLKRMKDCISTIDKLDSYNGVIHPAFKRKK 150

[Close]

BLAST of Carg24641 vs. TrEMBL
Match: tr|A0A0A0L8X5|A0A0A0L8X5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122450 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 8.3e-57
Identity = 124/154 (80.52%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 1   MSFDKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLE 60
           MS DKPGED GVSGFE EE EPDSELEELELEV QMAQRILHYRSTLSAQ+KSSF SLLE
Sbjct: 1   MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLE 60

Query: 61  SARPVAFGPSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMI 120
           S+RP+A   SEPGIS  P+HEDDE Q TRGE T LH+EGLE  KKIQL+KDKISSN +MI
Sbjct: 61  SSRPLAIA-SEPGISARPDHEDDE-QTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMI 120

Query: 121 PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS 155
           P VLKRMKDCISTID LDSYNG IHPAFKR+K S
Sbjct: 121 PTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS 152

[Close]

BLAST of Carg24641 vs. TrEMBL
Match: tr|A0A2H5NPT3|A0A2H5NPT3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_064790 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.3e-24
Identity = 74/154 (48.05%), Postives = 99/154 (64.29%), Query Frame = 0


Query: 4   DKPGEDTGVSGFESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESAR 63
           D  G + G    E EE     ELE LE +V +MAQ+IL YR+TL  QLK +F ++L + R
Sbjct: 15  DFQGAECGPGESEREE----EELENLESDVKKMAQKILEYRATLPDQLKHTFATILSAQR 74

Query: 64  PVAFG---PSEPGISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMI 123
           P+  G    SEPG S   N +++       EGT   +E  +A +K+ LLK+KISSN+S +
Sbjct: 75  PIFPGFVSVSEPGPSGKANPDNE------SEGTTPMEEEQKASEKVHLLKEKISSNMSAM 134

Query: 124 PAVLKRMKDCISTIDNLDSYNGSIHPAFKRRKAS 155
           P VLKR+K+CIS ID LDSY+G IHPAFKR++ S
Sbjct: 135 PTVLKRVKECISKIDELDSYSGIIHPAFKRKRPS 158

[Close]

BLAST of Carg24641 vs. TrEMBL
Match: tr|V4VY04|V4VY04_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022632mg PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23
Identity = 72/142 (50.70%), Postives = 96/142 (67.61%), Query Frame = 0


Query: 16  ESEEMEPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFG---PSEP 75
           ESE  E D  LE LE +V +MAQ+IL YR+TL  QLK +F ++L + RP+  G    SEP
Sbjct: 25  ESEREEED--LENLESDVKKMAQKILEYRATLPDQLKHTFATILSAQRPIFPGFVSVSEP 84

Query: 76  GISVPPNHEDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMIPAVLKRMKDCIS 135
           G S   N +++       EGT   +E  +A +K+ LLK+KISSN+S +P VLKR+K+CIS
Sbjct: 85  GPSGKANPDNE------SEGTTPMEEEQKASEKVHLLKEKISSNMSAMPTVLKRVKECIS 144

Query: 136 TIDNLDSYNGSIHPAFKRRKAS 155
            ID LDSY+G IHPAFKR++ S
Sbjct: 145 KIDELDSYSGIIHPAFKRKRPS 158

[Close]

BLAST of Carg24641 vs. TrEMBL
Match: tr|A0A2I4HMX1|A0A2I4HMX1_9ROSI (uncharacterized protein LOC109019621 OS=Juglans regia OX=51240 GN=LOC109019621 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23
Identity = 67/134 (50.00%), Postives = 91/134 (67.91%), Query Frame = 0


Query: 21  EPDSELEELELEVNQMAQRILHYRSTLSAQLKSSFISLLESARPVAFGPSEPGISVPPNH 80
           + D ELE+LE +V +MAQ+IL YR+TL  QL+++  S+L + RPV     EP  S  P  
Sbjct: 19  DEDDELEQLESDVLEMAQKILDYRATLPDQLRTTLASVLAAQRPVFPNGLEPAPSGGP-- 78

Query: 81  EDDEQQITRGEGTVLHDEGLEAEKKIQLLKDKISSNISMIPAVLKRMKDCISTIDNLDSY 140
             D  Q++  EG    +   EA +KI+LLK+KIS+N+S +P VLKRMK+C+S ID LDSY
Sbjct: 79  ISDAGQVSSSEGEQQLEGNQEATEKIRLLKEKISNNVSAMPVVLKRMKECLSKIDKLDSY 138

Query: 141 NGSIHPAFKRRKAS 155
           NG +HPAFKR+  S
Sbjct: 139 NGIVHPAFKRKGTS 150

The following BLAST results are available for this feature:

BLAST of Carg24641 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938825.1	2.9e-77	100.00	uncharacterized protein LOC111444897 isoform X1 [Cucurbita moschata]	[more]
XP_023540790.1	5.4e-76	98.70	uncharacterized protein LOC111801058 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022974668.1	4.6e-75	98.05	uncharacterized protein LOC111473350 isoform X1 [Cucurbita maxima]	[more]
XP_008438056.1	9.7e-57	80.26	PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo]	[more]
XP_004133867.1	1.3e-56	80.52	PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus] >KGN56521.1 hy...	[more]

BLAST of Carg24641 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00525.1	1.1e-06	34.09	unknown protein	[more]

BLAST of Carg24641 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg24641 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVF8\|A0A1S3AVF8_CUCME	6.4e-57	80.26	uncharacterized protein LOC103483278 OS=Cucumis melo OX=3656 GN=LOC103483278 PE=...	[more]
tr\|A0A0A0L8X5\|A0A0A0L8X5_CUCSA	8.3e-57	80.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122450 PE=4 SV=1	[more]
tr\|A0A2H5NPT3\|A0A2H5NPT3_CITUN	9.3e-24	48.05	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_064790 PE=4 SV=1	[more]
tr\|V4VY04\|V4VY04_9ROSI	1.2e-23	50.70	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022632mg PE=4 ...	[more]
tr\|A0A2I4HMX1\|A0A2I4HMX1_9ROSI	1.2e-23	50.00	uncharacterized protein LOC109019621 OS=Juglans regia OX=51240 GN=LOC109019621 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24641-RA	Carg24641-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 26..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR36045	FAMILY NOT NAMED	coord: 16..153

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24641	Cla021241	Watermelon (97103) v1	carwmB0378
Carg24641	Csa3G122450	Cucumber (Chinese Long) v2	carcuB0414
Carg24641	MELO3C006115	Melon (DHL92) v3.5.1	carmeB0389
Carg24641	ClCG05G001580	Watermelon (Charleston Gray)	carwcgB0376
Carg24641	CSPI03G08830	Wild cucumber (PI 183967)	carcpiB0417
Carg24641	Cucsa.258320	Cucumber (Gy14) v1	carcgyB0447
Carg24641	CmaCh06G010630	Cucurbita maxima (Rimu)	carcmaB0535
Carg24641	CmaCh14G020340	Cucurbita maxima (Rimu)	carcmaB0534
Carg24641	CmoCh06G010840	Cucurbita moschata (Rifu)	carcmoB0521
Carg24641	CmoCh14G020930	Cucurbita moschata (Rifu)	carcmoB0520
Carg24641	Lsi05G020340	Bottle gourd (USVL1VR-Ls)	carlsiB350
Carg24641	Cp4.1LG03g16860	Cucurbita pepo (Zucchini)	carcpeB0536
Carg24641	Cp4.1LG08g01160	Cucurbita pepo (Zucchini)	carcpeB0537
Carg24641	CsGy3G008910	Cucumber (Gy14) v2	carcgybB0392
Carg24641	MELO3C006115.2	Melon (DHL92) v3.6.1	carmedB0393
Carg24641	CsaV3_3G008970	Cucumber (Chinese Long) v3	carcucB0417
Carg24641	Cla97C05G081970	Watermelon (97103) v2	carwmbB0405
Carg24641	Bhi01G000260	Wax gourd	carwgoB0469

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24641	Carg21006	Silver-seed gourd	carcarB409

The following block(s) are covering this gene:

None