CsaV3_3G008970 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCTTTTTATTCAATATTAATTTTTTTTATTTTTTACTTTTAGTTATTTGATTTTAGATCTTAATTGTACTATGATGGTCGGAGATTAATTAATCGAAAAAAAGATATAAATCACGATGACATATATAAAATTTTGAGATTAATCGTAAAAATATATATATATATATAAATCACGACCACATATATAAAATTTAGTAAAAAGTGATCGGGCATCCTGAAATTTTATTAGAATTATGTAAATTACTTTCTAAAATGTGAAATAAATAAATAATAACAGTGGGCTGGGCTTATGATTGAGCCATGGGCCGAACGGTCAATGTTCAATTTTCATACTTTAATATTTGGCGGGCGCCCGATCGGGGCTTCAAGACCCGACAGGTTGGAGCGGCCTTTCTCGGCCAATCGATCTCACAATCCAATTCCATTTCAACGTCGAACATTCAAATTTCAAAATACGTTGCCCTCCAAATTCTCAAGATTCGCGTTCGATTCCATTCGAACACATAACTGAATTTCATTTCTCAGATCTTTCAATCCTACTTTCTCTAGAAACTGGCTGTGATTATAAACTCAAACATGTCCCCAGACAAACCCGGTGAAGATGCCGGGGTTTCTGGATTTGAACCCGAAGAAACCGAGCCCGATTCCGAGCTTGAGGAGCTGGAGCTTGAAGTTCAGCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTGTCGGCTCAAATCAAGTCCTCATTCTGTTCGTTACTTGAATCCTCGAGGCCTCTCGCCATAGCCTCGGAACCAGGAATATCTGCTCGTCCGGATCATGAAGGTGGGATTCTTAGACTGTAATTTTAGTTTGTTTGGGTTTGAATAGTGATTTTGGGTGGATTTTCTTTCTTCCTCTGAACTGGTAGATTTGCTGCCTCTATTATTTTGCTCGATTGGAGCCTTTTTAGGGTTCCTCAATTTTGTGGGTCTTTGTTTTCCTCATAAAAGTTGGTTTTTACCAATAAAAAAGGATAAAAAAAAAGTGAGCCTCTGTACTTCTTTTGGTGTAGTTTTTTATAAGTATGATAGTTGTAGGGAATAAATTGATTGTGTGTACAAGCTCTGGAGAAATGTTACATTATATATATAAACTTTTGTATTTTAAATTTACAATCCATATCCTATTGAGTTTAGTTATCTTGTAATTTTTCATTGCTTGTTGTTGAGCCAGTTTTCACTGTTCTTGCTGTTTGGGTGGGTATTTCTTTCGGCAGCAAACATTCTAATGAAACTATTGCATCAAAAGTTCATAATGGAAGTCATAATTCTTGCTCTAGTCTAGGCTTACAAATAAGGATCTTAGGTTGTCTTATGGGAGATCTGAGTTGAGAGAAATTTCAGGACTTCTCTACCCTAGGATTTATTTTAGCTTTTGGGATTGTTTCATACTATTGTTTGCTGATTTGGTCCTTCTTTATGAAATTTCTTTTAGATTTTGGGATGAATTTGCTTCTTCCCTTGCTTTTGTGTTCCTTTTGATCCGTTAATCTCATGGTCTGTCAAAGTCTGCATGTCGTCCCCATTTTAGATCTTTCTCATTTCATAAATCACTCTTGTTTTTTGGATAAGATTTAAAGATTAAATTTTGTGAATACTTCAGATATTCATGCATATTTTGATTGGTTATGAATGCAGAGCTAGGATTTTTCATTTTTCTTTCTGTATATCAAGTTTCAAAAGCAATTATTGACCTTTTGGACTCGTTAATGTATATATGGATGCATGCGTTTTCTTAACAATATGTGGGGGTGAGATTTATGAAACAACACTAGGTTGGTTGAAGATTATGATGAACTTTTATTATGACGGTTTATATATTTGTTACTCAGCTATTGCGTCTAATTAACAAATTCCTTTATCATGCAGATGATGAGCAAACCACAAGAGGAGAAGACACAAATCTTCATGAAGAGGGTTTAGAAACTGCAAAGAAGATACAATTGATTAAAGATAAAATATCAAGTAATAATACTATGATCCCTACAGTCCTGAAGAGGATGAAAGACTGTATTTCAACGATTGACAAATTGGATTCTTATAATGGAGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGAATTTAATTGGTATACCTATGGTTGTTATTTTAGTGACAATTTACTTTCACGTGGGAGTCATTGAGTGTAGTATCATTATTGAGTTAGATGTTTAGTGTATTGAGCTTTACAATGTGTTGTCAAAAGGGGCTGAATATGTAGCATAACGTTTTGTGTATAAGGTAAGGTTACTCAAGTTCTAGTTTTCCATTTGTTGATGTATAAAATAATTGAGATATTGAACTAGAAAGTTCTACTTCAACTTTCTCCTTTTCCTATCATCCTCTTGTATCCACTTCTGGCATTATCGACATCATTTACGAACAAGAAAACAAATACAAGAACTTTATATCGGTATTCATTGAGAACATTAACAAAGAGGTTGGTTCGTTGATACAATATCCAAATATGTCACTGAAGGAGTATGTAATATGCATTATGGTATAGCCACGAGGGGAACTTTCTCTATCAGGTGGTGGCGTCTTAAATTGTTGTACATTTACAGGCAAGTACATCAATGTCAGAATCTAATCTTGGTATAGAGGAACTCACCATCAACCCCATCATAGTCTTCACGTTGCTAACGTCGAAGATGACACTGCTGAGTCCCTTCCCTACAACTACGATTTTTGTTCCAACGCCCACAAGTTTACATGGTGGTCTTGTCAGAAGGGAAGAAAATCTCCCCACTGGAATCCATCCCTTGTCTTCATTGTTCCACATCATCAATCTGGTTCCAGAACTTTGATCCAAGACGTAAAGGGTTTTGTCAACGATAACTGCTGGACCTCGCCATCCTGAAACCATTTCTGAGTTACTGTGCTGCCACATTCCGCTGGATGGGTCGTAAACAAGAGCATACACTTGAGAATCCGCAGATCGAAGACGGATATATATCTTTCCATCCATTACAATAGAATCTTCAATTTCATTCTGAATATTTGTAATATCCAAGTAAGGTTCCCATGTGTTGGTGCTCGGATCATATACGTCCCAAGAATGTAGATCACCTGAACTGGGA ATGTCCCCAGACAAACCCGGTGAAGATGCCGGGGTTTCTGGATTTGAACCCGAAGAAACCGAGCCCGATTCCGAGCTTGAGGAGCTGGAGCTTGAAGTTCAGCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTGTCGGCTCAAATCAAGTCCTCATTCTGTTCGTTACTTGAATCCTCGAGGCCTCTCGCCATAGCCTCGGAACCAGGAATATCTGCTCGTCCGGATCATGAAGATGATGAGCAAACCACAAGAGGAGAAGACACAAATCTTCATGAAGAGGGTTTAGAAACTGCAAAGAAGATACAATTGATTAAAGATAAAATATCAAGTAATAATACTATGATCCCTACAGTCCTGAAGAGGATGAAAGACTGTATTTCAACGATTGACAAATTGGATTCTTATAATGGAGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGA ATGTCCCCAGACAAACCCGGTGAAGATGCCGGGGTTTCTGGATTTGAACCCGAAGAAACCGAGCCCGATTCCGAGCTTGAGGAGCTGGAGCTTGAAGTTCAGCAAATGGCTCAGAGGATTCTTCACTACAGATCCACTCTGTCGGCTCAAATCAAGTCCTCATTCTGTTCGTTACTTGAATCCTCGAGGCCTCTCGCCATAGCCTCGGAACCAGGAATATCTGCTCGTCCGGATCATGAAGATGATGAGCAAACCACAAGAGGAGAAGACACAAATCTTCATGAAGAGGGTTTAGAAACTGCAAAGAAGATACAATTGATTAAAGATAAAATATCAAGTAATAATACTATGATCCCTACAGTCCTGAAGAGGATGAAAGACTGTATTTCAACGATTGACAAATTGGATTCTTATAATGGAGTCATTCATCCTGCATTCAAAAGGAAAAAAACTAGCTGA MSPDKPGEDAGVSGFEPEETEPDSELEELELEVQQMAQRILHYRSTLSAQIKSSFCSLLESSRPLAIASEPGISARPDHEDDEQTTRGEDTNLHEEGLETAKKIQLIKDKISSNNTMIPTVLKRMKDCISTIDKLDSYNGVIHPAFKRKKTS
BLAST of CsaV3_3G008970 vs. NCBI nr
Match: XP_004133867.1 (PREDICTED: uncharacterized protein LOC101223085 [Cucumis sativus] >KGN56521.1 hypothetical protein Csa_3G122450 [Cucumis sativus]) HSP 1 Score: 292.0 bits (746), Expect = 1.2e-75 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsaV3_3G008970 vs. NCBI nr
Match: XP_008438056.1 (PREDICTED: uncharacterized protein LOC103483278 [Cucumis melo]) HSP 1 Score: 266.2 bits (679), Expect = 7.1e-68 Identity = 141/150 (94.00%), Postives = 144/150 (96.00%), Query Frame = 0
BLAST of CsaV3_3G008970 vs. NCBI nr
Match: XP_022974668.1 (uncharacterized protein LOC111473350 isoform X1 [Cucurbita maxima]) HSP 1 Score: 225.7 bits (574), Expect = 1.1e-55 Identity = 125/154 (81.17%), Postives = 133/154 (86.36%), Query Frame = 0
BLAST of CsaV3_3G008970 vs. NCBI nr
Match: XP_022938825.1 (uncharacterized protein LOC111444897 isoform X1 [Cucurbita moschata]) HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55 Identity = 124/154 (80.52%), Postives = 132/154 (85.71%), Query Frame = 0
BLAST of CsaV3_3G008970 vs. NCBI nr
Match: XP_023540790.1 (uncharacterized protein LOC111801058 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 224.2 bits (570), Expect = 3.1e-55 Identity = 124/154 (80.52%), Postives = 132/154 (85.71%), Query Frame = 0
BLAST of CsaV3_3G008970 vs. TAIR10
Match: AT4G00525.1 (unknown protein) HSP 1 Score: 45.4 bits (106), Expect = 3.6e-05 Identity = 44/137 (32.12%), Postives = 65/137 (47.45%), Query Frame = 0
BLAST of CsaV3_3G008970 vs. TrEMBL
Match: tr|A0A0A0L8X5|A0A0A0L8X5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122450 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 8.0e-76 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsaV3_3G008970 vs. TrEMBL
Match: tr|A0A1S3AVF8|A0A1S3AVF8_CUCME (uncharacterized protein LOC103483278 OS=Cucumis melo OX=3656 GN=LOC103483278 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 4.7e-68 Identity = 141/150 (94.00%), Postives = 144/150 (96.00%), Query Frame = 0
BLAST of CsaV3_3G008970 vs. TrEMBL
Match: tr|F6GVE2|F6GVE2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g00850 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 9.2e-24 Identity = 69/145 (47.59%), Postives = 96/145 (66.21%), Query Frame = 0
BLAST of CsaV3_3G008970 vs. TrEMBL
Match: tr|A0A2H5NPT3|A0A2H5NPT3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_064790 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23 Identity = 74/155 (47.74%), Postives = 101/155 (65.16%), Query Frame = 0
BLAST of CsaV3_3G008970 vs. TrEMBL
Match: tr|V4VY04|V4VY04_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022632mg PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23 Identity = 71/143 (49.65%), Postives = 99/143 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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